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In this paper, we investigated a new heroin–cocaine epidemic model which incorporates spatial heterogeneity and nonlinear incidence rate. The main project of this paper is to explore the threshold dynamics in terms of the basic reproduction number $ \mathcal {R}_0 $ R 0 , which was defined by applying the next-generation operator. The threshold type results shown that if $ \mathcal {R}_0 \lt 1 $ R 0 < 1 , then the drug-free steady state is globally asymptotically stable. If $ \mathcal {R}_0 \gt 1 $ R 0 > 1 , then heroin–cocaine spread is uniformly persistent. Furthermore, the globally asymptotic stability of the drug-free steady state has been established for the critical case of $ \mathcal {R}_0=1 $ R 0 = 1 by analysing the local asymptotic stability and global attractivity. [ABSTRACT FROM AUTHOR]

The adaptive immune system has two types of plasma cells (PC), long-lived plasma cells (LLPC) and short-lived plasma cells (SLPC), that differ in their lifespan. In this paper, we propose that LLPC is crucial to the clearance of viral particles in addition to reducing the viral basic reproduction number in secondary infections. We use a sequence of within-host mathematical models to show that, CD8 T cells, SLPC and memory B cells cannot achieve full viral clearance, and the viral load will reach a low positive equilibrium level because of a continuous replenishment of target cells. However, the presence of LLPC is crucial for viral clearance. [ABSTRACT FROM AUTHOR]

HIV/AIDS-COVID-19 co-infection is a major public health concern especially in developing countries of the world. This paper presents HIV/AIDS-COVID-19 co-infection to investigate the impact of interventions on its transmission using ordinary differential equation. In the analysis of the model, the solutions are shown to be non-negative and bounded, using next-generation matrix approach the basic reproduction numbers are computed, sufficient conditions for stabilities of equilibrium points are established. The sensitivity analysis showed that transmission rates are the most sensitive parameters that have direct impact on the basic reproduction numbers and protection and treatment rates are more sensitive and have indirect impact to the basic reproduction numbers. Numerical simulations shown that some parameter effects on the transmission of single infections as well as co-infection, and applying the protection rates and treatment rates have effective roles to minimize and also to eradicate the HIV/AIDS-COVID-19 co-infection spreading in the community. [ABSTRACT FROM AUTHOR]

In this paper we assess the effectiveness of different non-pharmaceutical interventions (NPIs) against COVID-19 utilizing a compartmental model. The local asymptotic stability of equilibria (disease-free and endemic) in terms of the basic reproduction number have been determined. We find that the system undergoes a backward bifurcation in the case of imperfect quarantine. The parameters of the model have been estimated from the total confirmed cases of COVID-19 in India. Sensitivity analysis of the basic reproduction number has been performed. The findings also suggest that effectiveness of face masks plays a significant role in reducing the COVID-19 prevalence in India. Optimal control problem with several control strategies has been investigated. We find that the intervention strategies including implementation of lockdown, social distancing, and awareness only, has the highest cost-effectiveness in controlling the infection. This combined strategy also has the least value of average cost-effectiveness ratio (ACER) and associated cost. [ABSTRACT FROM AUTHOR]

In this paper, we are concerned with an epidemic model with quarantine and distributed time delay. We define the basic reproduction number R 0 and show that if R 0 ≤ 1 , then the disease-free equilibrium is globally asymptotically stable, whereas if R 0 > 1 , then it is unstable and there exists a unique endemic equilibrium. We obtain sufficient conditions for a Hopf bifurcation that induces a nontrivial periodic solution which represents recurrent epidemic waves. By numerical simulations, we illustrate stability and instability parameter regions. Our results suggest that the quarantine and time delay play important roles in the occurrence of recurrent epidemic waves. [ABSTRACT FROM AUTHOR]

The goal of this paper is to investigate the influence of the waning immunity on the dynamics of Tilapia Lake Virus (TiLV) transmission in wild and farmed tilapia within freshwater. We formulate a model for which susceptible individuals can contract the disease in two ways: (i) direct mode caused by contact with infected individuals; (ii) indirect mode due to the presence of pathogenic agents in the water. We obtain an age-structured model which combines both age since infection and age since recovery. We derive an explicit formula for the reproductive number R 0 and show that the disease-free equilibrium is locally asymptotically stable when, R 0 < 1. We discuss on the form of the waning immunity parameter and show numerically that a Hopf bifurcation may occur for suitable immunity parameter values, which means that there is a periodic solution around the endemic equilibrium when, R 0 > 1. [ABSTRACT FROM AUTHOR]

In this paper, a reaction-diffusion SIR epidemic model via environmental driven infection in heterogeneous space is proposed. To reflect the prevention and control measures of disease in allusion to the susceptible in the model, the nonlinear incidence function E f (S) is applied to describe the protective measures of susceptible. In the general spatially heterogeneous case of the model, the well-posedness of solutions is obtained. The basic reproduction number R 0 is calculated. When R 0 ≤ 1 the global asymptotical stability of the disease-free equilibrium is obtained, while when R 0 > 1 the model is uniformly persistent. Furthermore, in the spatially homogeneous case of the model, when R 0 > 1 the global asymptotic stability of the endemic equilibrium is obtained. Lastly, the numerical examples are enrolled to verify the open problems. [ABSTRACT FROM AUTHOR]

Epidemiological models with the identical basic reproduction number R 0 may behave differently on both short time scale and long time scale. In this paper, we compare the predicted final sizes for several deterministic epidemic models and estimate the probabilities of a minor/major outbreak for continuous-time Markov chain (CTMC) models, all epidemic models have the identical R 0 . It is proved that the final size predicted by the epidemic model with homogeneous mixing is larger than with heterogeneous mixing. For CTMC models with heterogeneous mixing, the probabilities of a minor outbreak initiated by superspreaders and non-superspreaders are calculated and compared. For both deterministic modelling and stochastic modelling, numerical simulations are performed to support the mathematical analysis. [ABSTRACT FROM AUTHOR]

The outbreak of COVID-19 was first experienced in Wuhan City, China, during December 2019 before it rapidly spread over globally. This paper has proposed a mathematical model for studying its transmission dynamics in the presence of face mask wearing and hospitalization services of human population in Tanzania. Disease-free and endemic equilibria were determined and subsequently their local and global stabilities were carried out. The trace-determinant approach was used in the local stability of disease-free equilibrium point while Lyapunov function technique was used to determine the global stability of both disease-free and endemic equilibrium points. Basic reproduction number, R 0 , was determined in which its numerical results revealed that, in the presence of face masks wearing and medication services or hospitalization as preventive measure for its transmission, R 0 = 0.698 while in their absence R 0 = 3.8. This supports its analytical solution that the disease-free equilibrium point E 0 is asymptotically stable whenever R 0 < 1 , while endemic equilibrium point E ∗ is globally asymptotically stable for R 0 > 1. Therefore, this paper proves the necessity of face masks wearing and hospitalization services to COVID-19 patients to contain the disease spread to the population. [ABSTRACT FROM AUTHOR]

In meta-population models for infectious diseases, the basic reproduction number can be as much as 70% larger in the case of preferential mixing than that in homogeneous mixing [J.W. Glasser, Z. Feng, S.B. Omer, P.J. Smith, and L.E. Rodewald, The effect of heterogeneity in uptake of the measles, mumps, and rubella vaccine on the potential for outbreaks of measles: A modelling study, Lancet ID 16 (2016), pp. 599–605. doi: ]. This suggests that realistic mixing can be an important factor to consider in order for the models to provide a reliable assessment of intervention strategies. The influence of mixing is more significant when the population is highly heterogeneous. In this paper, another quantity, the final epidemic size () of an outbreak, is considered to examine the influence of mixing and population heterogeneity. Final size relation is derived for a meta-population model accounting for a general mixing. The results show that can be influenced by the pattern of mixing in a significant way. Another interesting finding is that, heterogeneity in various sub-population characteristics may have the opposite effect on and. [ABSTRACT FROM AUTHOR]

In this paper, with eclipse stage in consideration, we propose an HIV-1 infection model with a general incidence rate and CTL immune response. We first study the existence and local stability of equilibria, which is characterized by the basic infection reproduction number R 0 and the basic immunity reproduction number R 1 . The local stability analysis indicates the occurrence of transcritical bifurcations of equilibria. We confirm the bifurcations at the disease-free equilibrium and the infected immune-free equilibrium with transmission rate and the decay rate of CTLs as bifurcation parameters, respectively. Then we apply the approach of Lyapunov functions to establish the global stability of the equilibria, which is determined by the two basic reproduction numbers. These theoretical results are supported with numerical simulations. Moreover, we also identify the high sensitivity parameters by carrying out the sensitivity analysis of the two basic reproduction numbers to the model parameters. [ABSTRACT FROM AUTHOR]

Self-medication is an important initial response to illness in Africa. This mode of medication is often done with the help of African traditional medicines. Because of the misconception that African traditional medicines can cure/prevent all diseases, some Africans may opt for COVID-19 prevention and management by self-medicating. Thus to efficiently predict the dynamics of COVID-19 in Africa, the role of the self-medicated population needs to be taken into account. In this paper, we formulate and analyse a mathematical model for the dynamics of COVID-19 in Cameroon. The model is represented by a system of compartmental age-structured ODEs that takes into account the self-medicated population and subdivides the human population into two age classes relative to their current immune system strength. We use our model to propose policy measures that could be implemented in the course of an epidemic in order to better handle cases of self-medication. [ABSTRACT FROM AUTHOR]

In this paper, a deterministic model characterizing the within-host infection of Hepatitis C virus (HCV) in intrahepatic and extrahepatic tissues is presented. In addition, the model also includes the effect of the cytotoxic T lymphocyte (CTL) immunity described by a linear activation rate by infected cells. Firstly, the non-negativity and boundedness of solutions of the model are established. Secondly, the basic reproduction number R 01 and immune reproduction number R 02 are calculated, respectively. Three equilibria, namely, infection-free, CTL immune response-free and infected equilibrium with CTL immune response are discussed in terms of these two thresholds. Thirdly, the stability of these three equilibria is investigated theoretically as well as numerically. The results show that when R 01 < 1 , the virus will be cleared out eventually and the CTL immune response will also disappear; when R 02 < 1 < R 01 , the virus persists within the host, but the CTL immune response disappears eventually; when R 02 > 1 , both of the virus and the CTL immune response persist within the host. Finally, a brief discussion will be given. [ABSTRACT FROM AUTHOR]

In this paper, we study a more general diffusive spatially dependent vaccination model for infectious disease. In our diffusive vaccination model, we consider both therapeutic impact and nonlinear incidence rate. Also, in this model, the number of compartments of susceptible, vaccinated and infectious individuals are considered to be functions of both time and location, where the set of locations (equivalently, spatial habitats) is a subset of R n with a smooth boundary. Both local and global stability of the model are studied. Our study shows that if the threshold level R 0 ≤ 1 , the disease-free equilibrium E 0 is globally asymptotically stable. On the other hand, if R 0 > 1 then there exists a unique stable disease equilibrium E ∗ . The existence of solutions of the model and uniform persistence results are studied. Finally, using finite difference scheme, we present a number of numerical examples to verify our analytical results. Our results indicate that the global dynamics of the model are completely determined by the threshold value R 0 . [ABSTRACT FROM AUTHOR]

In this paper, we propose and analyse a delayed HIV-1 model with both viral and cellular transmissions and virus waning. We obtain the threshold dynamics of the proposed model, characterized by the basic reproduction number R 0 . If R 0 < 1 , the infection-free steady state is globally asymptotically stable; whereas if R 0 > 1 , the system is uniformly persistent. When the delays are positive, we show that the intracellular delays in both viral and cellular infections may lead to stability switches of the infected steady state. Both analytical and numerical results indicate that if the effect of cell-to-cell transmission is ignored, then the risk of HIV-1 infection will be underestimated. Moreover, the viral load of model without virus waning is higher than the one of model with virus waning. These results highlight the important role of two ways of viral transmission and virus waning on HIV-1 infection. [ABSTRACT FROM AUTHOR]

Scarlet fever is an acute respiratory infectious disease and the incidence rate is increasing from 2011 throughout the world. In this paper, the mathematical models are proposed, which incorporate both direct transmissions and indirect transmissions of scarlet fever. The threshold conditions for disease invasion are obtained in terms of the basic reproduction number. The peak value, final size and epidemic time in a seasonal prevalence are investigated numerically. Furthermore, the effects of seasonal fluctuations on disease outbreak are also studied on the basis of real data in China. [ABSTRACT FROM AUTHOR]

In this paper, we apply optimal control theory to a novel coronavirus (COVID-19) transmission model given by a system of non-linear ordinary differential equations. Optimal control strategies are obtained by minimizing the number of exposed and infected population considering the cost of implementation. The existence of optimal controls and characterization is established using Pontryagin's Maximum Principle. An expression for the basic reproduction number is derived in terms of control variables. Then the sensitivity of basic reproduction number with respect to model parameters is also analysed. Numerical simulation results demonstrated good agreement with our analytical results. Finally, the findings of this study shows that comprehensive impacts of prevention, intensive medical care and surface disinfection strategies outperform in reducing the disease epidemic with optimum implementation cost. [ABSTRACT FROM AUTHOR]

Backward bifurcation is an important property of infectious disease models. A centre manifold method has been developed by Castillo-Chavez and Song for detecting the presence of backward bifurcation and deriving a necessary and sufficient condition for its occurrence in Ordinary Differential Equations (ODE) models. In this paper, we extend this method to partial differential equation systems. First, we state a main theorem. Next we illustrate the application of the new method on a chronological age-structured Susceptible-Infected-Susceptible (SIS) model with density-dependent recovery rate, an age-since-infection structured HIV/AIDS model with standard incidence and an age-since-infection structured cholera model with vaccination. [ABSTRACT FROM AUTHOR]

This paper proposes a malaria transmission model to describe the dynamics of malaria transmission in the human and mosquito populations. This model emphasizes the impact of limited resource on malaria transmission. We derive a formula for the basic reproductive number of infection and investigate the existence of endemic equilibria. It is shown that this model may undergo backward bifurcation, where the locally stable disease-free equilibrium co-exists with an endemic equilibrium. Furthermore, we determine conditions under which the disease-free equilibrium of the model is globally asymptotically stable. The global stability of the endemic equilibrium is also studied when the basic reproductive number is greater than one. Finally, numerical simulations to illustrate our findings and brief discussions are provided. [ABSTRACT FROM AUTHOR]

Vector-borne infectious diseases may involve both horizontal transmission between hosts and transmission from infected vectors to susceptible hosts. In this paper, we incorporate these two transmission modes into a vector-borne disease model that includes general nonlinear incidence rates and the age of infection for both hosts and vectors. We show the existence, uniqueness, nonnegativity, and boundedness of solutions for the model. We study the existence and local stability of steady states, which is shown to be determined by the basic reproduction number. By showing the existence of a global compact attractor and uniform persistence of the system, we establish the threshold dynamics using the Fluctuation Lemma and the approach of Lyapunov functionals. When the basic reproduction number is less than one, the disease-free steady state is globally asymptotically stable and otherwise the disease will be established when there is initial infection force for the hosts. We also study a model with the standard incidence rate and discuss the effect of different incidence rates on the disease dynamics. [ABSTRACT FROM AUTHOR]

This paper studies the global stability of discrete-time viral infection models with humoural immunity. We consider both latently and actively infected cells. We study also a model with general production and clearance rates of all compartments as well as general incidence rate of infection. We use nonstandard finite difference method to discretize the continuous-time models. The positivity and boundedness of solutions of the discrete models are established. We establish by using Lyapunov method, the global stability of equilibria in terms of the basic reproduction number R 0 and the humoural immune response activation number R 1 . The results signify that the infection dies out if R 0 ≤ 1. Moreover, the infection persists with inactive immune response if R 1 ≤ 1 < R 0 and with active immune response if R 1 > 1. We illustrate our theoretical results by using numerical simulations. [ABSTRACT FROM AUTHOR]

A more realistic alcoholism model on scale-free networks with demographic and nonlinear infectivity is introduced in this paper. The basic reproduction number R 0 is derived from the next-generation method. Global stability of the alcohol-free equilibrium is obtained. The persistence of our model is also derived. Furthermore, the SAITS model with nonlinear infectivity is also investigated. Stability of all the equilibria and persistence are also obtained. Some numerical simulations are also presented to verify and extend our theoretical results. [ABSTRACT FROM AUTHOR]

In this paper, we consider the impact of heterogeneous susceptibility on disease transmission dynamics, using a simple mathematical model formulated by a system of ordinary differential equations. Our model describes a time-varying immunity level, which is enhanced by reinfection and diminished by waning immunity. Through mathematical analysis, we show that unexpected outbreaks, called delayed outbreaks, occur even when the basic reproduction number is less than one. A reallocation of susceptibility at the individual level, by repeated infections, in the host population induces delayed outbreaks. [ABSTRACT FROM AUTHOR]

In this paper, a mathematical model describing tuberculosis transmission with fast and slow progression and age-dependent latency and infection is investigated. It is assumed in the model that infected individuals can develop tuberculosis by either of two pathogenic mechanisms: direct progression or endogenous reactivation. It is shown that the transmission dynamics of the disease is fully determined by the basic reproduction number. By analyzing corresponding characteristic equations, the local stability of a disease-free steady state and an endemic steady state of the model is established. By using the persistence theory for infinite dimensional system, it is proved that the system is uniformly persistent when the basic reproduction number is greater than unity. By constructing suitable Lyapunov functionals and using LaSalle's invariance principle, it is verified that the global dynamics of the system is completely determined by the basic reproduction number. [ABSTRACT FROM AUTHOR]

A delayed SEIR epidemic model with saturated incidence and saturated treatment function is considered in this paper. Sufficient conditions for the existence of local Hopf bifurcation are established by regarding the possible combination of the two delays as the bifurcation parameter. General formula for the direction, period and stability of the bifurcated periodic solutions are derived by using the normal form method and the centre manifold theory. Finally, some numerical simulations are given to illustrate the obtained results. [ABSTRACT FROM AUTHOR]

In this paper, we investigate an age-structured HIV infection model with logistic growth for target cell. We rewrite the model as an abstract non-densely defined Cauchy problem and obtain the condition which guarantees the existence of the unique positive steady state. By linearizing the model at steady state and analysing the associated characteristic transcendental equations, we study the local asymptotic stability of the steady state. Furthermore, by using Hopf bifurcation theorem in Liu et al., we show that Hopf bifurcation occurs at the positive steady state when bifurcating parameter crosses some critical values. Finally, we perform some numerical simulations to illustrate our results. [ABSTRACT FROM AUTHOR]

In this paper, the dysentery dynamics model with controls is theoretically investigated using the stability theory of differential equations. The system is considered as SIRSB deterministic compartmental model with treatment and sanitation. A threshold number R 0 is obtained such that R 0 ≤ 1 indicates the possibility of dysentery eradication in the community while R 0 > 1 represents uniform persistence of the disease. The Lyapunov–LaSalle method is used to prove the global stability of the disease-free equilibrium. Moreover, the geometric approach method is used to obtain the sufficient condition for the global stability of the unique endemic equilibrium for R 0 > 1. Numerical simulation is performed to justify the analytical results. Graphical results are presented and discussed quantitatively. It is found out that the aggravation of the disease can be decreased by using the constant controls treatment and sanitation. [ABSTRACT FROM AUTHOR]

In this paper, we establish a mathematical model with two delays to reflect the intrinsic and extrinsic incubation periods of virus in dengue transmission. The basic reproduction number R 0 of the model is defined. It is proved that the disease-free equilibrium is stable when R 0 < 1 and the positive equilibrium is stable when R 0 > 1. Next, we derive an estimation formula for the reproduction number R t when the human population is partially susceptible to dengue. As an application, the R t values of dengue transmission in Singapore in the years 2013–2015 are estimated. Our estimation method can be applied to estimating R t of other infectious diseases, especially when the human population is not completely susceptible to the disease. [ABSTRACT FROM AUTHOR]

In this paper, an age-structured cholera model with multiple transmissions, saturation incidence and imperfect vaccination is proposed. In the model, we consider both the infection age of infected individuals and the biological age of Vibrio cholerae in the aquatic environment. Asymptotic smoothness is verified as a necessary argument. By analysing the characteristic equations, the local stability of disease-free and endemic steady states is established. By using Lyapunov functionals and LaSalle's invariance principle, it is proved that the global dynamics of the model can be completely determined by basic reproduction number. The study of optimal control helps us seek cost-effective solutions of time-dependent vaccination strategy against cholera outbreaks. Numerical simulations are carried out to illustrate the corresponding theoretical results. [ABSTRACT FROM AUTHOR]

In this study, we apply optimal control theory to an immunoepidemiological model of HIV and opioid epidemics. For the multiscale model, we used four controls: treating the opioid use, reducing HIV risk behaviour among opioid users, entry inhibiting antiviral therapy, and antiviral therapy which blocks the viral production. Two population-level controls are combined with two within-host-level controls. We prove the existence and uniqueness of an optimal control quadruple. Comparing the two population-level controls,wefind that reducing the HIV risk of opioid users has a stronger impact on the population who is both HIV-infected and opioid-dependent than treating the opioid disorder. The within-host-level antiviral treatment has an effect not only on the co-affected population but also on the HIV-only infected population. Our findings suggest that the most effective strategy for managing the HIV and opioid epidemics is combining all controls at both within-host and between-host scales. [ABSTRACT FROM AUTHOR]

Throughout the last two centuries, vaccines have been helpful in mitigating numerous epidemic diseases. However, vaccine hesitancy has been identified as a substantial obstacle in healthcare management. We examined the epidemiological dynamics of an emerging infection under vaccination using an SVEIR model with differential morbidity. We mathematically analyzed the model, derived R0, and provided a complete analysis of the bifurcation at R0 = 1. Sensitivity analysis and numerical simulations were used to quantify the tradeoffs between vaccine efficacy and vaccine hesitancy on reducing the disease burden. Our results indicated that if the percentage of the population hesitant about taking the vaccine is 10%, then a vaccine with 94% efficacy is required to reduce the peak of infections by 40%. If 60% of the population is reluctant about being vaccinated, then even a perfect vaccine will not be able to reduce the peak of infections by 40%. [ABSTRACT FROM AUTHOR]

In this paper, we introduce a model of malaria, a disease that involves a complex life cycle of parasites, requiring both human and mosquito hosts. The novelty of the model is the introduction of periodic coefficients into the system of one-dimensional equations, which account for the seasonal variations (wet and dry seasons) in the mosquito birth and death rates. We define a basic reproduction number R0 that depends on the periodic coefficients and prove that if R0<1 then the disease becomes extinct, whereas if R0>1 then the disease is endemic and may even be periodic. [ABSTRACT FROM AUTHOR]

This paper deals with the global property of a drinking model with public health educational campaigns. With the help of Lyapunov function, global stability of equilibria of the model is derived. The alcohol-free equilibrium is globally asymptotically stable and the alcohol problems are eliminated from population if R0 ≤ 1. A unique alcohol present equilibrium is globally asymptotically stable if R0 > 1. Furthermore, the basic reproductive R0 for the model is compared with the basic reproductive number R1 for the absence of public health educational campaigns. We conclude that the public health educational campaigns of drinking individuals can slow down the drinking dynamics. Some numerical simulations are also given to explain our conclusions. [ABSTRACT FROM AUTHOR]

Epidemiological models with the identical basic reproduction number R 0 may behave differently on both short time scale and long time scale. In this paper, we compare the predicted final sizes for several deterministic epidemic models and estimate the probabilities of a minor/major outbreak for continuous-time Markov chain (CTMC) models, all epidemic models have the identical R 0 . It is proved that the final size predicted by the epidemic model with homogeneous mixing is larger than with heterogeneous mixing. For CTMC models with heterogeneous mixing, the probabilities of a minor outbreak initiated by superspreaders and non-superspreaders are calculated and compared. For both deterministic modelling and stochastic modelling, numerical simulations are performed to support the mathematical analysis. [ABSTRACT FROM AUTHOR]

This paper investigates consequences of vaccine implementation strategies for infectious diseases by a mathematical model. For an infectious disease, the degree of infection may vary widely among the individuals. Reports show that individuals belonging to certain groups possess considerably higher risk to infection. Incorporating this phenomenon into vaccination strategies, the host is categorized into different groups to measure the outcome of the vaccination. A mathematical model is proposed and analysed to evaluate this measure. Our results suggest that vaccinating a group with certain priority may lead to elimination of the disease effectively. The strategy is cost-effective as well. [ABSTRACT FROM AUTHOR]

We propose a hand, foot and mouth disease (HFMD) transmission model for children with behaviour change and imperfect quarantine. The symptomatic and quarantined states obey constant behaviour change while others follow variable behaviour change depending on the numbers of new and recent infections. The basic reproduction number $ \mathcal {R}_0 $ R 0 of the model is defined and shown to be a threshold for disease persistence and eradication. Namely, the disease-free equilibrium is globally asymptotically stable if $ \mathcal {R}_0\le 1 $ R 0 ≤ 1 whereas the disease persists and there is a unique endemic equilibrium otherwise. By fitting the model to weekly HFMD data of Shanghai in 2019, the reproduction number is estimated at 2.41. Sensitivity analysis for $ \mathcal {R}_0 $ R 0 shows that avoiding contagious contacts and implementing strict quarantine are essential to lower HFMD persistence. Numerical simulations suggest that strong behaviour change not only reduces the peak size and endemic level dramatically but also impairs the role of asymptomatic transmission. [ABSTRACT FROM AUTHOR]

A multi-patch HIV/AIDS model with heterosexual transmission is formulated to investigate the impact of population migration on the spread of HIV/AIDS. We derive the basic reproduction number $ R_{0} $ R 0 and prove that if $ R_{0} \lt 1 $ R 0 < 1 , the disease-free equilibrium is globally asymptotically stable. If $ R_{0} \gt 1 $ R 0 > 1 and certain conditions are satisfied, the endemic equilibrium is globally asymptotically stable. We apply the model to two patches and conduct numerical simulations. If HIV/AIDS becomes extinct in each patch when two patches are isolated, the disease remains extinct in two patches when the population migration occurs; if HIV/AIDS spreads in each patch when two patches are isolated, the disease remains persistent in two patches when the population migration occurs; if the disease disappears in one patch and spreads in the other patch when they are isolated, the disease can spread or disappear in two patches if migration rates of individuals are suitably chosen. [ABSTRACT FROM AUTHOR]

Many factors influencing disease transmission vary throughout and across populations. For diseases spread through multiple transmission pathways, sources of variation may affect each transmission pathway differently. In this paper we consider a disease that can be spread via direct and indirect transmission, such as the waterborne disease cholera. Specifically, we consider a system of multiple patches with direct transmission occurring entirely within patch and indirect transmission via a single shared water source. We investigate the effect of heterogeneity in dual transmission pathways on the spread of the disease. We first present a 2-patch model for which we examine the effect of variation in each pathway separately and propose a measure of heterogeneity that incorporates both transmission mechanisms and is predictive ofR0. We also explore how heterogeneity affects the final outbreak size and the efficacy of intervention measures. We conclude by extending several results to a more generaln-patch setting. [ABSTRACT FROM AUTHOR]

In this paper, we analyse the interaction of different species of birds and mosquitoes on the dynamics of West Nile virus (WNV) infection. We study the different transmission efficiencies of the vectors and birds and the impact on the possible outbreaks. We show that the basic reproductive number is the weighted mean of the basic reproductive number of each species, weighted by the relative abundance of its population in the location. These results suggest a possible explanation of why there are no outbreaks of WNV in Mexico. [ABSTRACT FROM PUBLISHER]

Vaccination is considered one of the most effective control measures for influenza. However, when a virus mutates and multi-strains appear in a population, implementing a vaccine for one strain may affect the spread of the other strains. In this paper, we propose a two-strain model and investigate the effects of a single-strain vaccine on the dynamics of this two-strain model. The global dynamics of the model are completely determined through suitable Lyapunov functions. We show that if the basic reproduction number is less than one, then both strains die out; but when the number is larger than one, one or both of the strains become endemic depending on the parameter values. The theoretical results provide some useful information on the impact of the vaccination rate of this single-vaccine for one strain on the dynamics of the two strains. [ABSTRACT FROM AUTHOR]

Recently, we [E.M.C. D'Agata, G.F. Webb, M.A. Horn, R.C. Moellering Jr., and S. Ruan, Modelling the invasion of community-acquired methicillin-resistant Staphylococcus aureus into the hospital setting, Clin. Infect. Dis. 48 (2009), pp. 274-284] proposed a deterministic mathematical model to characterize the factors contributing to the replacement of hospital-acquired methicillin-resistant Staphylococcus aureus (HA-MRSA) with the community-acquired MRSA (CA-MRSA) and to quantify the effectiveness of interventions aimed at limiting the spread of CA-MRSA in the hospital setting. Numerical simulations of the model strongly suggest that CA-MRSA will become the dominant MRSA strain in the hospital setting. In this companion paper, we provide steady-state analysis and more numerical simulations of the model. It is shown that when no colonized or infected patients enter the hospital, competitive exclusion of HA-MRSA by CA-MRSA will occur with increased severity of CA-MRSA infections resulting in longer hospitalizations and a larger in-hospital reservoir of CA-MRSA. Improving compliance with hand hygiene and decolonization of CA-MRSA carriers are effective control strategies. [ABSTRACT FROM AUTHOR]

A susceptible-vaccinated-infectious-recovered epidemic model with infection age and relapse age has been formulated. We first address the asymptotic smoothness of the solution semiflow, existence of a global attractor, and uniform persistence of the model. Then by constructing suitable Volterra-type Lyapunov functionals, we establish a global threshold dynamics of the model, which is determined by the basic reproduction number. Biologically, it is confirmed that neglecting the possibility of vaccinees getting infected will over-estimate the effect of vaccination strategies. The obtained results generalize some existing ones. [ABSTRACT FROM PUBLISHER]

Cholera is an acute enteric infectious disease caused by the Gram-negative bacterium Vibrio cholerae. Despite a huge body of research, the precise nature of its transmission dynamics has yet to be fully elucidated. Mathematical models can be useful to better understand how an infectious agent can spread and be properly controlled. We develop a compartmental model describing a human population, a bacterial population as well as a phage population. We show that there might be eight equilibrium points, one of which is a disease free equilibrium point. We carry out numerical simulations and sensitivity analyses and we show that the presence of phage can reduce the number of infectious individuals. Moreover, we discuss the main implications in terms of public health management and control strategies. [ABSTRACT FROM AUTHOR]

A possible control strategy against the spread of an infectious disease is the treatment with antimicrobials that are given prophylactically to those who had a contact with an infective person. The treatment continues until recovery or until it becomes obvious that there was no infection in the first place. The model considers susceptible, treated uninfected exposed, treated infected, (untreated) infectious, and recovered individuals. Since treatment lengths have an arbitrary distribution, the model system consists of ordinary differential and integral equations. A sharp threshold condition is established in terms of a basic replacement ratio (disease reproduction number) that separates disease extinction from uniform disease persistence. We use results from dynamical systems persistence theory proving the existence of a global compact attractor along the way. Existence and multiplicity of endemic equilibria are also studied. [ABSTRACT FROM AUTHOR]

This note provides an elementary derivation of the basic reproduction number and the effective reproduction number from the discrete Kermack–McKendrick epidemic model. The derived formulae match those derived from the continuous version of the model; however, the derivation from discrete model is a bit more intuitive. The MATLAB functions for its calculation are given. A real case example is considered and the results are compared with those obtained by the R0 and the EpiEstim software packages. [ABSTRACT FROM AUTHOR]

Studies have shown that sexual transmission, both heterosexually and homosexually, is one of the main ways of HBV infection. Based on this fact, we propose a mathematical model to study the sexual transmission of HBV among adults by classifying adults into men and women and considering both same-sex and opposite-sex transmissions of HBV in adults. Firstly, we calculate the basic reproduction number R 0 and the disease-free equilibrium point E 0 . Secondly, by analysing the sensitivity of R 0 in terms of model parameters, we find that the infection rate among people who have same-sex partners, the frequency of homosexual contact and the immunity rate of adults play important roles in the transmission of HBV. Moreover, we use our model to fit the reported data in China and forecast the trend of hepatitis B. Our results demonstrate that popularizing the basic knowledge of HBV among residents, advocating healthy and reasonable sexual life style, reducing the number of adult carriers, and increasing the immunization rate of adults are effective measures to prevent and control hepatitis B. [ABSTRACT FROM AUTHOR]

Basic reproduction number R 0 in network epidemic dynamics is studied in the case of stochastic regime-switching networks. For generality, the dependence between successive networks is considered to follow a continuous time semi-Markov chain. R 0 is the weighted average of the basic reproduction numbers of deterministic subnetworks. Its position with respect to 1 can determine epidemic persistence or extinction in theories and simulations. [ABSTRACT FROM AUTHOR]

In this article, a stochastic SACR hepatitis B epidemic model is taken to be under consideration. We develop a stochastic epidemic model by considering the effect of environmental fluctuation on the hepatitis B dynamics and distribute the transmission rate by white noise. Using the stochastic Lyapunov function theory, we have shown the existence and uniqueness of the global positive solution. The extinction and persistence for our proposed model are derived with sufficient conditions. The numerical simulations are carried out using first-order Itô-Taylor stochastic scheme in the last section for the verification of our theoretical results. [ABSTRACT FROM AUTHOR]

We use juvenile-adult discrete-time infectious disease models with intrinsically generated demographic population cycles to study the effects of age structure on the persistence or extinction of disease and the basic reproduction number, R 0 . Our juvenile-adult Susceptible-Infectious-Recovered (SIR) and Infectious-Salmon Anemia-Virus (ISA v) models share a common disease-free system that exhibits equilibrium dynamics for the Beverton-Holt recruitment function. However, when the recruitment function is the Ricker model, a juvenile-adult disease-free system exhibits a range of dynamic behaviours from stable equilibria to deterministic period k population cycles to Neimark-Sacker bifurcations and deterministic chaos. For these two models, we use an extension of the next generation matrix approach for calculating R 0 to account for populations with locally asymptotically stable period k cycles in the juvenile-adult disease-free system. When R 0 < 1 and the juvenile-adult demographic system (in the absence of the disease) has a locally asymptotically stable period k population cycle, we prove that the juvenile-adult disease goes extinct whenever R 0 < 1. Under the same period k juvenile-adult demographic assumption but with R 0 > 1 , we prove that the juvenile-adult disease-free period k population cycle is unstable and the disease persists. When R 0 > 1 , our simulations show that the juvenile-adult disease-free period k cycle dynamics drives the juvenile-adult SIR disease dynamics, but not the juvenile-adult ISAv disease dynamics. [ABSTRACT FROM AUTHOR]

We propose a model of a joint spread of heroin use and HIV infection. The unique disease-free equilibrium always exists and it is stable if the basic reproduction numbers of heroin use and HIV infection are both less than 1. The semi-trivial equilibrium of HIV infection (heroin use) exists if the basic reproduction number of HIV infection (heroin use) is larger than 1 and it is locally stable if and only if the invasion number of heroin use (HIV infection) is less than 1. When both semi-trivial equilibria lose their stability, a coexistence equilibrium occurs, which may not be unique. We compare the model to US data on heroin use and HIV transmission. We conclude that the two diseases in the US are in a coexistence regime. Elasticities of the invasion numbers suggest two foci for control measures: targeting the drug abuse epidemic and reducing HIV risk in drug-users. [ABSTRACT FROM AUTHOR]