7 results on '"Stokes, Sarah"'
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2. Intrinsic electrophilic properties of nucleosides: Photoelectron spectroscopy of their parent anions.
- Author
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Stokes, Sarah T., Xiang Li, Grubisic, Andrej, Yeon Jae Ko, and Bowen, Kit H.
- Subjects
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ELECTROPHILES , *NUCLEOSIDES , *NUCLEOTIDES , *PHOTOELECTRON spectroscopy , *ANIONS , *PHYSICS - Abstract
The nucleoside parent anions 2′-deoxythymidine-, 2′-deoxycytidine-, 2′-deoxyadenosine-, uridine-, cytidine-, adenosine-, and guanosine- were generated in a novel source, employing a combination of infrared desorption, electron photoemission, and a gas jet expansion. Once mass selected, the anion photoelectron spectrum of each of these was recorded. In the three cases in which comparisons were possible, the vertical detachment energies and likely adiabatic electron affinities extracted from these spectra agreed well with the values calculated both by Richardson et al. [J. Am. Chem. Soc. 126, 4404 (2004)] and by Li et al. [Radiat. Res. 165, 721 (2006)]. Through the combination of our experimental results and their theoretical calculations, several implications emerge. (1) With the possible exception of dG-, the parent anions of nucleosides exist, and they are stable. (2) These nucleoside anions are valence anions, and in most cases the negative charge is closely associated with the nucleobase moiety. (3) The nucleoside parent anions we have generated and studied are the negative ions of canonical, neutral nucleosides, similar to those found in DNA. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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3. Two new double Rydberg anions plus access to excited states of neutral Rydberg radicals via anion photoelectron spectroscopy.
- Author
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Radisic, Dunja, Stokes, Sarah T., and Bowen Jr., Kit H.
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ANIONS , *IONS , *BICARBONATE ions , *RYDBERG states , *ATOMIC spectra , *ENERGY levels (Quantum mechanics) - Abstract
We have observed and characterized two new double Rydberg anions N6H19- and N7H22- through their anion photoelectron spectra. The vertical detachment energies of these anions were found to be 0.443 and 0.438 eV, respectively. In addition, for three of the seven double Rydberg anions now known, we measured photodetachment transitions not only to the ground electronic states of their corresponding neutral Rydberg radicals but also to their first electronically excited states. In each spectrum, the energy spacing between the resulting peaks provided the ground-to-first electronically excited-state transition energy for the double Rydberg anion’s corresponding neutral Rydberg radical. For the radicals, N4H13, N5H16, and N6H19, the spacings were found to be 0.83, 0.70, and 0.67 eV, respectively. These values are in excellent agreement with ground-to-first excited-state transition energies measured in absorption for the same neutral Rydberg radicals by Fuke and co-workers [Eur. Phys. J. D 9, 309 (1999); J. Phys. Chem. A 106, 5242 (2002).] The duplication of this neutral Rydberg property by photodetachment of double Rydberg anions further confirms that double Rydberg anions are indeed the negative ions of their corresponding neutral Rydberg molecules and cluster-like systems. [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
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4. Barrier-free intermolecular proton transfer induced by excess electron attachment to the complex of alanine with uracil.
- Author
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Dabkowska, Iwona, Rak, Janusz, Gutowski, Maciej, Nilles, J. Michael, Stokes, Sarah T., and Bowen Jr., Kit H.
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PHOTOELECTRONS ,PHOTONS ,ELECTRONS ,FORCE & energy ,ANIONS ,ALANINE ,URACIL - Abstract
The photoelectron spectrum of the uracil–alanine anionic complex (UA)[sup -] has been recorded with 2.540 eV photons. This spectrum reveals a broad feature with a maximum between 1.6 and 2.1 eV. The vertical electron detachment energy is too large to be attributed to an (UA)[sup -] anionic complex in which an intact uracil anion is solvated by alanine, or vice versa. The neutral and anionic complexes of uracil and alanine were studied at the B3LYP and second-order Møller–Plesset level of theory with 6-31++G** basis sets. The neutral complexes form cyclic hydrogen bonds and the three most stable neutral complexes are bound by 0.72, 0.61, and 0.57 eV. The electron hole in complexes of uracil with alanine is localized on uracil, but the formation of a complex with alanine strongly modulates the vertical ionization energy of uracil. The theoretical results indicate that the excess electron in (UA)[sup -] occupies a π* orbital localized on uracil. The excess electron attachment to the complex can induce a barrier-free proton transfer (BFPT) from the carboxylic group of alanine to the O8 atom of uracil. As a result, the four most stable structures of the uracil–alanine anionic complex can be characterized as a neutral radical of hydrogenated uracil solvated by a deprotonated alanine. Our current results for the anionic complex of uracil with alanine are similar to our previous results for the anion of uracil with glycine [Eur. Phys. J. D 20, 431 (2002)], and together they indicate that the BFPT process is not very sensitive to the nature of the amino acid’s hydrophobic residual group. The BFPT to the O8 atom of uracil may be relevant to the damage suffered by nucleic acid bases due to exposure to low energy electrons. © 2004 American Institute of Physics. [ABSTRACT FROM AUTHOR]
- Published
- 2004
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5. Dipole-bound anions of highly polar molecules: Ethylene carbonate and vinylene carbonate.
- Author
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Hammer, Nathan I., Hinde, Robert J., Compton, Robert N., Diri, Kadir, Jordan, Kenneth D., Radisic, Dunja, Stokes, Sarah T., and Bowen, Kit H.
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ANIONS ,RYDBERG states ,CHARGE exchange ,IONS ,BINDING energy - Abstract
Results of experimental and theoretical studies of dipole-bound negative ions of the highly polar molecules ethylene carbonate (EC, C[sub 3]H[sub 4]O[sub 3],μ=5.35 D) and vinylene carbonate (VC, C[sub 3]H[sub 2]O[sub 3],μ=4.55 D) are presented. These negative ions are prepared in Rydberg electron transfer (RET) reactions in which rubidium (Rb) atoms, excited to ns or nd Rydberg states, collide with EC or VC molecules to produce EC[sup -] or VC[sup -] ions. In both cases ions are produced only when the Rb atoms are excited to states described by a relatively narrow range of effective principal quantum numbers, n[sup *]; the greatest yields of EC[sup -] and VC[sup -] are obtained for n[sub max][sup *]=9.0±0.5 and 11.6±0.5, respectively. Charge transfer from low-lying Rydberg states of Rb is characteristic of a large excess electron binding energy (E[sub b]) of the neutral parent; employing the previously derived empirical relationship E[sub b]=23/n[sub max][sup *2.8] eV, the electron binding energies are estimated to be 49±8 meV for EC and 24±3 meV for VC. Electron photodetachment studies of EC[sup -] show that the excess electron is bound by 49±5 meV, in excellent agreement with the RET results, lending credibility to the empirical relationship between E[sub b] and n[sub max][sup *]. Vertical electron affinities for EC and VC are computed employing aug-cc-pVDZ atom-centered basis sets supplemented with a (5s5p) set of diffuse Gaussian primitives to support the dipole-bound electron; at the CCSD(T) level of theory the computed electron affinities are 40.9 and 20.1 meV for EC and VC, respectively. © 2004 American Institute of Physics. [ABSTRACT FROM AUTHOR]
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- 2004
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6. Photoelectron spectroscopic studies of 5-halouracil anions.
- Author
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Radisic, Dunja, Ko, Yeon Jae, Nilles, John M., Stokes, Sarah T., Sevilla, Michael D., Rak, Janusz, and Bowen, Kit H.
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PHOTOELECTRON spectroscopy ,URACIL ,MOLECULAR orbitals ,INTERMEDIATES (Chemistry) ,MASS spectrometry ,FLUOROPYRIMIDINES ,THYMINE ,BROMOURACIL - Abstract
The parent negative ions of 5-chlorouracil, UCl- and 5-fluorouracil, UF- have been studied using anion photoelectron spectroscopy in order to investigate the electrophilic properties of their corresponding neutral halouracils. The vertical detachment energies (VDE) of these anions and the adiabatic electron affinities (EA) of their neutral molecular counterparts are reported. These results are in good agreement with the results of previously published theoretical calculations. The VDE values for both UCl- and UF- and the EA values for their neutral molecular counterparts are much greater than the corresponding values for both anionic and neutral forms of canonical uracil and thymine. These results are consistent with the observation that DNA is more sensitive to radiation damage when thymine is replaced by halouracil. While we also attempted to prepare the parent anion of 5-bromouracil, UBr-, we did not observe it, the mass spectrum exhibiting only Br- fragments, i.e., 5-bromouracil apparently underwent dissociative electron attachment. This observation is consistent with a previous assessment, suggesting that 5-bromouracil is the best radio-sensitizer among these three halo-nucleobases. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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7. On the interaction of electrons with betaine zwitterions.
- Author
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Zheng W, Xu S, Radisic D, Stokes S, Li X, and Bowen KH Jr
- Abstract
Betaine is a permanent zwitterion. The molecular betaine anion has been generated in a hybrid, infrared desorption-electron photoemission source and its photoelectron spectrum recorded. The photoelectron spectrum of the betaine anion is characteristic of a dipole bound anion, and its vertical detachment energy was measured to be 0.29+/-0.03 eV. Calculations by Rak, Skurski, and Gutowski [J. Chem. Phys. 114, 10673 (2001)] had found the betaine anion to be a dipole bound anion with a vertical detachment energy of 0.28 eV. We also measured the vertical detachment energy of deprotonated betaine to be approximately 1.9 eV.
- Published
- 2005
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