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Frequency and severity of droughts were projected to increase in many regions. However, their effects of temporal dynamics on the terrestrial carbon cycle remain uncertain, and hence deserve further investigation. In this paper, the droughts that occurred in China during 2001–2010 were identified by using the standardized precipitation index (SPI). Standardized anomaly index (SAI), which has been widely employed in reflecting precipitation, was extended to evaluate the anomalies of net primary productivity (NPP). In addition, influences of the droughts on vegetation were explored by examining the temporal dynamics of SAI–NPP along with area-weighted drought intensity at different time scales (1, 3, 6, 9 and 12 months). Year-to-year variability of NPP with several factors, including droughts, NDVI, radiation and temperature, was analyzed as well. Consequently, the droughts in the years 2001, 2006 and 2009 were well reconstructed. This indicates that SPI could be applied to the monitoring of the droughts in China during the past decade (2001–2010) effectively. Moreover, strongest correlations between droughts and NPP anomalies were found during or after the drought intensities reached their peak values. In addition, some droughts substantially reduced the countrywide NPP, whereas the others did not. These phenomena can be explained by the regional diversities of drought intensity, drought duration, areal extents of the droughts, as well as the cumulative and lag responses of vegetation to the precipitation deficits. Besides the drought conditions, normalized difference vegetation index (NDVI), radiation and temperature also contribute to the interannual variability of NPP. [Copyright &y& Elsevier]