6 results on '"Port JD"'
Search Results
2. Association of Accuracy, Conclusions, and Reporting Completeness With Acceptance by Radiology Conferences and Journals.
- Author
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Frank RA, Fabiano N, Hallgrimson Z, Korevaar DA, Cohen JF, Bossuyt PM, Leeflang MMG, Moher D, McInnes MDF, Treanor L, Salameh JP, McGrath TA, Sharifabadi AD, Atyani A, Kazi S, Choo-Foo J, Asraoui N, Alabousi M, Ha W, Prager R, Rooprai P, Pozdnyakov A, John S, Osman H, Islam N, Li N, Gauthier ID, Absi M, Kraaijpoel N, Ebrahimzadeh S, Port JD, Stoker J, Klein JS, and Schweitzer M
- Subjects
- Humans, Prospective Studies, Publication Bias, Retrospective Studies, Periodicals as Topic, Radiology
- Abstract
Background: Preferential publication of studies with positive findings can lead to overestimation of diagnostic test accuracy (i.e. publication bias). Understanding the contribution of the editorial process to publication bias could inform interventions to optimize the evidence guiding clinical decisions., Purpose/hypothesis: To evaluate whether accuracy estimates, abstract conclusion positivity, and completeness of abstract reporting are associated with acceptance to radiology conferences and journals., Study Type: Meta-research., Population: Abstracts submitted to radiology conferences (European Society of Gastrointestinal and Abdominal Radiology (ESGAR) and International Society for Magnetic Resonance in Medicine (ISMRM)) from 2008 to 2018 and manuscripts submitted to radiology journals (Radiology, Journal of Magnetic Resonance Imaging [JMRI]) from 2017 to 2018. Primary clinical studies evaluating sensitivity and specificity of a diagnostic imaging test in humans with available editorial decisions were included., Assessment: Primary variables (Youden's index [YI > 0.8 vs. <0.8], abstract conclusion positivity [positive vs. neutral/negative], number of reported items on the Standards for Reporting of Diagnostic Accuracy Studies [STARD] for Abstract guideline) and confounding variables (prospective vs. retrospective/unreported, sample size, study duration, interobserver agreement assessment, subspecialty, modality) were extracted., Statistical Tests: Multivariable logistic regression to obtain adjusted odds ratio (OR) as a measure of the association between the primary variables and acceptance by radiology conferences and journals; 95% confidence intervals (CIs) and P-values were obtained; the threshold for statistical significance was P < 0.05., Results: A total of 1000 conference abstracts (500 ESGAR and 500 ISMRM) and 1000 journal manuscripts (505 Radiology and 495 JMRI) were included. Conference abstract acceptance was not significantly associated with YI (adjusted OR = 0.97 for YI > 0.8; CI = 0.70-1.35), conclusion positivity (OR = 1.21 for positive conclusions; CI = 0.75-1.90) or STARD for Abstracts adherence (OR = 0.96 per unit increase in reported items; CI = 0.82-1.18). Manuscripts with positive abstract conclusions were less likely to be accepted by radiology journals (OR = 0.45; CI = 0.24-0.86), while YI (OR = 0.85; CI = 0.56-1.29) and STARD for Abstracts adherence (OR = 1.06; CI = 0.87-1.30) showed no significant association. Positive conclusions were present in 86.7% of submitted conference abstracts and 90.2% of journal manuscripts., Data Conclusion: Diagnostic test accuracy studies with positive findings were not preferentially accepted by the evaluated radiology conferences or journals., Evidence Level: 3 TECHNICAL EFFICACY: Stage 2., (© 2022 International Society for Magnetic Resonance in Medicine.)
- Published
- 2022
- Full Text
- View/download PDF
3. Short TE (7) Li-MRS confirms Bi-exponential lithium T2 relaxation in humans and clearly delineates two patient subtypes.
- Author
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Port JD, Rampton KE, Shu Y, Manduca A, and Frye MA
- Subjects
- Adult, Antimanic Agents pharmacokinetics, Antimanic Agents therapeutic use, Bipolar Disorder diagnosis, Female, Humans, Isotopes pharmacokinetics, Male, Middle Aged, Tissue Distribution, Bipolar Disorder drug therapy, Bipolar Disorder metabolism, Brain metabolism, Lithium pharmacokinetics, Lithium Carbonate pharmacokinetics, Lithium Carbonate therapeutic use, Magnetic Resonance Spectroscopy methods
- Abstract
Purpose: (i) To develop an MRS technique to measure (7) Li levels in human brain in a reasonable scan time, (ii) to develop a technique to quantify (7) Li T2 relaxation times as measured from human brain in patients taking lithium for the treatment of their bipolar disorder, and (iii) to confirm or refute the presence of bi-exponential (7) Li T2 relaxation in human brain., Materials and Methods: We modified a spin-echo MRS pulse sequence to decrease its minimum echo time. With IRB approval, we performed lithium MRS with the modified pulse sequence on 13 euthymic bipolar patients stable on long-term lithium to treat their disease., Results: We were able to achieve a total scan time per sample of 8:20; total scan time including imaging, calibration and MRS was approximately 1 h 15 min. We observed bi-exponential T2 relaxation in the majority of patients, with an average short decay time of 5.3 ± 1.4 ms and an average long decay time of 68.2 ± 10.2 ms. However, in two patients we observed strongly mono-exponential T2 relaxation with an average decay time of 47.4 ± 1.3 ms., Conclusion: (7) Li relaxation patterns may prove useful to distinguish between lithium-responsive and lithium nonresponsive bipolar patients., (Copyright © 2012 Wiley Periodicals, Inc.)
- Published
- 2013
- Full Text
- View/download PDF
4. MR spectroscopy in schizophrenia.
- Author
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Port JD and Agarwal N
- Subjects
- Aspartic Acid analogs & derivatives, Aspartic Acid analysis, Glutamates analysis, Neurotransmitter Agents analysis, gamma-Aminobutyric Acid metabolism, Magnetic Resonance Spectroscopy, Schizophrenia metabolism
- Abstract
The purpose of this study is to review the MR spectroscopic literature regarding schizophrenia. However, as there are over 250 primary MRS articles and dozens of MRS review articles on the subject already, this study will take a different approach. First, the clinical features of schizophrenia will be described. The background neuroanatomy and biochemistry relevant to schizophrenia will be reviewed, as many readers of this journal are unlikely to be familiar with these fields. A current model of the abnormal neural circuitry in schizophrenia will be presented, and predictions extrapolated about relevant metabolite changes over time. Finally, the existing MRS literature will be reviewed in the context of our existing anatomical and chemical knowledge, and future MRS research directions will be elaborated., (Copyright © 2011 Wiley Periodicals, Inc.)
- Published
- 2011
- Full Text
- View/download PDF
5. Measurement of human skeletal muscle oxidative capacity by 31P-MR spectroscopy: a cross-validation with in vitro measurements.
- Author
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Lanza IR, Bhagra S, Nair KS, and Port JD
- Subjects
- Adult, Biopsy methods, Cohort Studies, Female, Humans, Hydrogen-Ion Concentration, In Vitro Techniques, Knee pathology, Male, Middle Aged, Mitochondria metabolism, Muscles pathology, Oxidative Stress, Oxygen metabolism, Phosphocreatine metabolism, Reproducibility of Results, Magnetic Resonance Spectroscopy methods, Muscle, Skeletal pathology, Phosphocreatine analogs & derivatives, Phosphorus Isotopes pharmacology
- Abstract
Purpose: To cross-validate skeletal muscle oxidative capacity measured by (31)P-MR spectroscopy with in vitro measurements of oxidative capacity in mitochondria isolated from muscle biopsies of the same muscle group in 18 healthy adults., Materials and Methods: Oxidative capacity in vivo was determined from PCr recovery kinetics following a 30-s maximal isometric knee extension. State 3 respiration was measured in isolated mitochondria using high-resolution respirometry. A second cohort of 10 individuals underwent two (31)P-MRS testing sessions to assess the test-retest reproducibility of the method., Results: Overall, the in vivo and in vitro methods were well-correlated (r = 0.66-0.72) and showed good agreement by Bland Altman plots. Excellent reproducibility was observed for the PCr recovery rate constant (CV = 4.6%; ICC = 0.85) and calculated oxidative capacity (CV = 3.4%; ICC = 0.83)., Conclusion: These results indicate that (31)P-MRS corresponds well with gold-standard in vitro measurements and is highly reproducible., (Copyright © 2011 Wiley Periodicals, Inc.)
- Published
- 2011
- Full Text
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6. Selective maximization of (31)P MR spectroscopic signals of in vivo human brain metabolites at 3T.
- Author
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Blenman RA, Port JD, and Felmlee JP
- Subjects
- Adult, Brain Chemistry, Female, Humans, Magnetics, Male, Middle Aged, Phantoms, Imaging, Phosphorus Isotopes, Reference Values, Time Factors, Brain metabolism, Magnetic Resonance Spectroscopy methods, Signal Processing, Computer-Assisted
- Abstract
Purpose: To develop a short TR, short TE, large flip angle (LFA), in vivo (31)P MR spectroscopy (MRS) technique at 3T that selectively maximizes the signal-to-noise ratio (SNR) of long T(1) human brain metabolites implicated in bipolar disorder., Materials and Methods: Two pulse sequences were evaluated for efficiency. Slice profiles acquired with the scaled, sinc-shaped, radiofrequency (RF) LFA pulses were compared to those acquired with Shinnar-Le Roux (SLR) RF LFA pulses. The SLR-based LFA pulse sequence was used to maximize the inorganic phosphate signal in a phantom, after which volunteer metabolite signals were selectively maximized and compared to their correlates acquired with conventional spin-echo methods., Results: The comparison of slice profiles acquired with sinc-shaped RF LFA pulses vs. SLR RF LFA pulses showed that SLR-based pulse sequences, with their improved excitation and slice profiles, yield significantly better results. In vivo LFA spin-echo MRS implemented with SLR pulses selectively increased the (31)P MRS signal, by as much as 93%, of human brain metabolites that have T(1) times longer than the TR of the acquisition., Conclusion: The data show that the LFA technique can be employed in vivo to maximize the signal of long T(1) (31)P brain metabolites at a given TE and TR. LFAs ranging between 120 degrees and 150 degrees are shown to maximize the (31)P signal of human brain metabolites at 3T.
- Published
- 2007
- Full Text
- View/download PDF
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