1. Structural Analysis of the Human Golgi-associated Plant Pathogenesis Related Protein GAPR-1 Implicates Dimerization as a Regulatory Mechanism
- Author
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Ramon L Serrano, Astrid Hendricks, Irmgard Sinning, J. Bernd Helms, Audrey Kuhn, Matthew Groves, Drug Design, and Medicinal Chemistry and Bioanalysis (MCB)
- Subjects
Proteases ,Protein family ,Protein Conformation ,Molecular Sequence Data ,Population ,Golgi Apparatus ,Sequence Homology ,CHO Cells ,Biology ,Crystallography, X-Ray ,Serine ,symbols.namesake ,Protein structure ,Structural Biology ,Cricetinae ,Two-Hybrid System Techniques ,Catalytic triad ,Animals ,Humans ,Site-Directed ,Amino Acid Sequence ,education ,Molecular Biology ,Peptide sequence ,education.field_of_study ,Crystallography ,Sequence Homology, Amino Acid ,Membrane Proteins ,Golgi apparatus ,Amino Acid ,Biochemistry ,Mutagenesis ,Mutagenesis, Site-Directed ,X-Ray ,symbols ,Crystallization ,Dimerization - Abstract
The plant pathogenesis related proteins group 1 (PR-1) and a variety of related mammalian proteins constitute a PR-1 protein family that share sequence and structural similarities. GAPR-1 is a unique family member as thus far it is the only PR-1 family member that is not co-translationally targeted to the lumen of the endoplasmic reticulum before trafficking to either vacuoles or secretion. Here we report that GAPR-1 may form dimers in vitro and in vivo, as determined by yeast two-hybrid screening, biochemical and biophysical assays. The 1.55A crystal structure demonstrates that GAPR-1 is structurally homologous to the other PR-1 family members previously solved (p14a and Ves V 5). Through an examination of inter-molecular interactions between GAPR-1 molecules in the crystal lattice, we propose a number of the highly conserved amino acid residues of the PR-1 family to be involved in the regulation of dimer formation of GAPR-1 with potential implications for other PR-1 family members. We show that mutagenesis of these conserved amino acid residues leads to a greatly increased dimer population. A recent report suggests that PR-1 family members may exhibit serine protease activity and further examination of the dimer interface of GAPR-1 indicates that a catalytic triad similar to that of serine proteases may be formed across the dimer interface by residues from both molecules within the dimer.
- Published
- 2004
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