29 results on '"Gu, W"'
Search Results
2. Nickel L-edge soft x-ray spectroscopy of nickel-iron hydrogenases and model compounds-evidence for high-spin nickel(II) in the active enzyme
- Author
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Wang, Hongxin, Ralston C.Y., Patil, D.s., Jones, R.M., Gu, W., Verhagen, M., Adams, M., Ge, P., Riordan, C, Marganian, C.a., Mascharak, P., Kovacs, J., Miller, C.G., Collins, T.J., Brooker, S., Croucher, P.D., Wang, Kun, Stiefel, E.I., and Cramer, S.P.
- Subjects
Nickel -- Research ,X-ray spectroscopy -- Usage ,Chemistry - Abstract
Nickel-iron hydrogenase model compounds were studied using L-edge x-ray absorption spectroscopy.
- Published
- 2000
3. Nickel L-Edge Soft X-ray Spectroscopy of Nickel−Iron Hydrogenases and Model CompoundsEvidence for High-Spin Nickel(II) in the Active Enzyme
- Author
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Wang, Hongxin, primary, Ralston, C. Y., additional, Patil, D. S., additional, Jones, R. M., additional, Gu, W., additional, Verhagen, M., additional, Adams, M., additional, Ge, P., additional, Riordan, C., additional, Marganian, C. A., additional, Mascharak, P., additional, Kovacs, J., additional, Miller, C. G., additional, Collins, T. J., additional, Brooker, S., additional, Croucher, P. D., additional, Wang, Kun, additional, Stiefel, E. I., additional, and Cramer, S. P., additional
- Published
- 2000
- Full Text
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4. Characterization of Heterogeneous Nickel Sites in CO Dehydrogenases fromClostridium thermoaceticumandRhodospirillum rubrumby Nickel L-Edge X-ray Spectroscopy
- Author
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Ralston, C. Y., primary, Wang, Hongxin, additional, Ragsdale, S. W., additional, Kumar, M., additional, Spangler, N. J., additional, Ludden, P. W., additional, Gu, W., additional, Jones, R. M., additional, Patil, D. S., additional, and Cramer, S. P., additional
- Published
- 2000
- Full Text
- View/download PDF
5. Unraveling the Cleavage Reaction of Hydroxylamines with Cyclopropenones Considering Biocompatibility.
- Author
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Zeng T, Wu Q, Liu Y, Qi Q, Shen W, Gu W, Zhang Y, Xiong W, Xie Z, Qi X, Tian T, and Zhou X
- Subjects
- Humans, HeLa Cells, Biocompatible Materials chemistry, Biocompatible Materials pharmacology, Biocompatible Materials chemical synthesis, Density Functional Theory, Molecular Structure, CRISPR-Cas Systems, Prodrugs chemistry, Prodrugs pharmacology, Prodrugs chemical synthesis, Cyclopropanes chemistry, Cyclopropanes pharmacology, Hydroxylamines chemistry
- Abstract
We develop a latent biocompatible cleavage reaction involving the hitherto unexplored interaction between hydroxylamines and cyclopropenones. Our study addresses the regioselectivity challenges commonly observed in asymmetric cyclopropenone transformations, substantiated by variations in substrate, Density Functional Theory calculations, and in situ NMR analysis. This reaction is characterized by high efficiency, broad substrate scope, stability, latent biocompatibility, and mild reaction conditions. Significantly, it facilitates fluorescence activation and functions as a controlled release mechanism for prodrugs, showing great promise in biological assays. Our success in achieving the controlled release of nitrogen mustard in HeLa cells underscores its potential application in cellular contexts. Additionally, we introduce a simple and highly efficient method for synthesizing α, β-substituted pentenolides, applicable to a variety of substrates. Moreover, we extend this cleavage reaction to the CRISPR-Cas9 system, achieving precise, on-demand regulation of guide RNA activity. The introduction of this cleavage reaction offers a promising tool for biochemical research and biotechnological applications.
- Published
- 2024
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6. Hydroxyl Spillover in Fe-Se Dual-Site Catalysts for Mixed Plastics Assay.
- Author
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Wu Y, Jiang W, Xu W, Lv F, Song S, Hu L, Wang C, Zheng L, Gu W, Zhang R, Guo S, and Zhu C
- Abstract
The complex composition of real plastic wastes poses a significant challenge for their large-scale disposal. A responsive on-site compositional analysis of plastics is informative in choosing downstream processing methods. Nanocatalyst-based assay kit is highly qualified for this scene; however, there remain no efficient nanocatalysts for plastics due to their highly inert chemistry. Herein, we first unveiled the hydroxyl spillover effect in an Fe-Se dual-site catalyst (FeSe/NC) and devised a prototype colorimetric assay kit for mixed plastics. Experimental and theoretical results unveiled that Fe sites acted as the main active sites for H
2 O2 activation to produce adsorbed hydroxyl (*OH) intermediates, which subsequently desorb as hydroxyl radicals (• OH) and transfer to Se sites, supports, and even plastics for further catalysis. Specifically,• OH transferred to different plastics shows varying activities, where signal outputs were hereby used as the fingerprint for plastic identification. Moreover, the remaining *OH could respond to redox interferences in the samples for enhanced accuracy. In contrast to traditional techniques involving precise apparatus and complex pretreatments, our approach enables a rapid assay (∼10 min) of raw powdery mixed plastic wastes with an ultralow cost (0.0012 $). This discovery fills a crucial gap in the plastic assay, offering new technical guidance for diverse upcycling and recycling strategies to tackle the global plastic waste crisis.- Published
- 2024
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7. Regulating Reactive Oxygen Species over M-N-C Single-Atom Catalysts for Potential-Resolved Electrochemiluminescence.
- Author
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Zhou Y, Wu Y, Luo Z, Ling L, Xi M, Li J, Hu L, Wang C, Gu W, and Zhu C
- Abstract
The development of potential-resolved electrochemiluminescence (ECL) systems with dual emitting signals holds great promise for accurate and reliable determination in complex samples. However, the practical application of such systems is hindered by the inevitable mutual interaction and mismatch between different luminophores or coreactants. In this work, for the first time, by precisely tuning the oxygen reduction performance of M-N-C single-atom catalysts (SACs), we present a dual potential-resolved luminol ECL system employing endogenous dissolved O
2 as a coreactant. Using advanced in situ monitoring and theoretical calculations, we elucidate the intricate mechanism involving the selective and efficient activation of dissolved O2 through central metal species modulation. This modulation leads to the controlled generation of hydroxyl radical (·OH) and superoxide radical (O2 ·- ), which subsequently trigger cathodic and anodic luminol ECL emission, respectively. The well-designed Cu-N-C SACs, with their moderate oxophilicity, enable the simultaneous generation of ·OH and O2 ·- , thereby facilitating dual potential-resolved ECL. As a proof of concept, we employed the principal component analysis statistical method to differentiate antibiotics based on the output of the dual-potential ECL signals. This work establishes a new avenue for constructing a potential-resolved ECL platform based on a single luminophore and coreactant through precise regulation of active intermediates.- Published
- 2024
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8. Bottom-Up Construction of Metal-Organic Framework Loricae on Metal Nanoclusters with Consecutive Single Nonmetal Atom Tuning for Tailored Catalysis.
- Author
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You Q, Wang H, Zhao Y, Fan W, Gu W, Jiang HL, and Wu Z
- Abstract
The introduction of single or multiple heterometal atoms into metal nanoparticles is a well-known strategy for altering their structures (compositions) and properties. However, surface single nonmetal atom doping is challenging and rarely reported. For the first time, we have developed synthetic methods, realizing "surgery"-like, successive surface single nonmetal atom doping, replacement, and addition for ultrasmall metal nanoparticles (metal nanoclusters, NCs), and successfully synthesized and characterized three novel bcc metal NCs Au
38 I(S-Adm)19 , Au38 S(S-Adm)20 , and Au38 IS(S-Adm)19 (S-Adm: 1-adamantanethiolate). The influences of single nonmetal atom replacement and addition on the NC structure and optical properties (including absorption and photoluminescence) were carefully investigated, providing insights into the structure (composition)-property correlation. Furthermore, a bottom-up method was employed to construct a metal-organic framework (MOF) on the NC surface, which did not essentially alter the metal NC structure but led to the partial release of surface ligands and stimulated metal NC activity for catalyzing p -nitrophenol reduction. Furthermore, surface MOF construction enhanced NC stability and water solubility, providing another dimension for tunning NC catalytic activity by modifying MOF functional groups.- Published
- 2024
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9. Acetylation Targeting Chimera Enables Acetylation of the Tumor Suppressor p53.
- Author
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Kabir M, Sun N, Hu X, Martin TC, Yi J, Zhong Y, Xiong Y, Kaniskan HÜ, Gu W, Parsons R, and Jin J
- Subjects
- Acetylation, Humans, Cell Line, Tumor, Mutation, Models, Molecular, Protein Processing, Post-Translational, Protein Structure, Tertiary, Tumor Suppressor Protein p53 chemistry, Tumor Suppressor Protein p53 genetics
- Abstract
With advances in chemically induced proximity technologies, heterobifunctional modalities such as proteolysis targeting chimeras (PROTACs) have been successfully advanced to clinics for treating cancer. However, pharmacologic activation of tumor-suppressor proteins for cancer treatment remains a major challenge. Here, we present a novel Ace tylation Ta rgeting C himera (AceTAC) strategy to acetylate the p53 tumor suppressor protein. We discovered and characterized the first p53Y220C AceTAC, MS78, which recruits histone acetyltransferase p300/CBP to acetylate the p53Y220C mutant. MS78 effectively acetylated p53Y220C lysine 382 (K382) in a concentration-, time-, and p300-dependent manner and suppressed proliferation and clonogenicity of cancer cells harboring the p53Y220C mutation with little toxicity in cancer cells with wild-type p53. RNA-seq studies revealed novel p53Y220C-dependent upregulation of TRAIL apoptotic genes and downregulation of DNA damage response pathways upon acetylation induced by MS78. Altogether, the AceTAC strategy could provide a generalizable platform for targeting proteins, such as tumor suppressors, via acetylation.
- Published
- 2023
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10. Dynamic Kinetic Resolution of β-Substituted α-Diketones via Asymmetric Transfer Hydrogenation.
- Author
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Chen T, Liu W, Gu W, Niu S, Lan S, Zhao Z, Gong F, Liu J, Yang S, Cotman AE, Song J, and Fang X
- Subjects
- Hydrogenation, Stereoisomerism, Catalysis, Kinetics, Ketones
- Abstract
Developing innovative dynamic kinetic resolution (DKR) modes and achieving the highly regio- and enantioselective semihydrogenation of unsymmetrical α-diketones are two formidable challenges in the field of contemporary asymmetric (transfer) hydrogenation. In this work, we report the highly regio- and stereoselective asymmetric semi-transfer hydrogenation of unsymmetrical α-diketones through a unique DKR mode, which features the reduction of the carbonyl group distal from the labile stereocenter, while the proximal carbonyl remains untouched. Moreover, the protocol affords a variety of enantioenriched acyclic ketones with α-hydroxy-α'-C(sp
2 )-functional groups, which represent a new product class that has not been furnished in known arts. The utilities of the products have been demonstrated in a series of further transformations including the rapid synthesis of drug molecules. Density functional theory calculations and plenty of control experiments have also been conducted to gain more mechanistic insights into the highly selective semihydrogenation.- Published
- 2023
- Full Text
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11. Mitigating the Immunogenicity of AAV-Mediated Gene Therapy with an Immunosuppressive Phosphoserine-Containing Zwitterionic Peptide.
- Author
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Yuan Z, Li B, Gu W, Luozhong S, Li R, and Jiang S
- Subjects
- Animals, Mice, Phosphoserine, Genetic Vectors, Mice, Knockout, Peptides genetics, Dependovirus genetics, Genetic Therapy
- Abstract
Although recombinant adeno-associated viruses (AAVs) are considered low immunogenic and safe for gene delivery, the immunogenicity of capsids still represents a major obstacle to the readministration of AAV vectors. Here, we design an immunosuppressive zwitterionic phosphoserine (PS)-containing polypeptide to induce AAV-specific immune tolerance and eradicate the immunological response. AAVs modified with the zwitterionic PS polypeptide maintain their transduction activity and tissue tropism but suppress the induction of AAV-specific antibodies. In a hemophilia A mouse model (FVIII knockout mice), the readministration of zwitterionic PS polypeptide-modified AAV8-FVIII vectors successfully evades immunological response, corrects blood FVIII levels, and stops blood loss in tail-bleeding experiments. This potent and safe technology mimics the natural tolerance of apoptotic cells and controls the immunosuppressive, zwitterionic, and degradable polypeptide precisely, reducing the concern of toxicities upon readministrations. This work presents a new concept and a platform of engineered viral vectors by chemically linking immunosuppressive materials to AAV vectors, enabling the readministration of AAV vectors while maintaining their transduction efficiency to a considerable degree.
- Published
- 2022
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12. Enantioselective Cross-Coupling for Axially Chiral Tetra-ortho-Substituted Biaryls and Asymmetric Synthesis of Gossypol.
- Author
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Yang H, Sun J, Gu W, and Tang W
- Abstract
The axially chiral tetra-ortho-substituted biaryl skeleton exists in numerous biologically important natural products, pharmaceutical molecules, chiral catalysts, and ligands. The efficient synthesis of chiral tetra-ortho-substituted biaryl structures remains a challenging but unsolved problem. Among various asymmetric synthetic protocols, enantioselective Suzuki-Miyaura cross-coupling represents one of the most straightforward and versatile approaches. Herein we describe a powerful Suzuki-Miyaura coupling enabled by a P-chiral monophosphorus ligand BaryPhos, providing a broad range of synthetically challenging chiral tetra-ortho-substituted biaryls in excellent enantioselectivities and yields. In addition to the enhanced reactivity for sterically hindered cross-coupling, the rational design of BaryPhos also enabled a new catalysis mode of asymmetric cross-coupling involving noncovalent interactions between the ligand and two coupling partners to effect efficient stereoinduction. This protocol is robust and practical, allowing for a concise enantioselective synthesis of therapeutically valuable male contraceptive and antitumor agent gossypol.
- Published
- 2020
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13. A Dual Purpose Strategy to Endow Gold Nanoclusters with Both Catalysis Activity and Water Solubility.
- Author
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Zhao Y, Zhuang S, Liao L, Wang C, Xia N, Gan Z, Gu W, Li J, Deng H, and Wu Z
- Abstract
Gold nanoclusters have attracted extensive interest for catalysis applications in recent years due to their ultrasmall sizes and well-defined compositions and structures. However, at least two challenges exist in this emerging field. First, the steric hindrance of the ligands inhibits the catalysis activity, and second, the mechanism underlying water-phase catalysis using gold nanoclusters is often ambiguous. Herein, we introduce a "kill two birds with one stone" strategy to address these two challenges via the use of host-guest chemistry. As an illustration, a novel adamantanethiolate-protected Au
40 (S-Adm)22 nanocluster was synthesized, bound with γ-CD-MOF, and then transferred to the HRP-mimicking reaction system. The as-obtained catalyst exhibits excellent water solubility and catalytical activity, totally different from the virgin Au40 (S-Adm)22 nanoclusters. Further, the detailed HRP-mimicking catalysis mechanism was proposed and supported by DFT calculation. Another interesting finding is the unique structure of Au40 (S-Adm)22 , which can be regarded as an Au13 icosahedron unit derived structure but different from the widely reported icosahedron contained nanocluster where the Au13 icosahedrons are often centered. These novel, intriguing results have important implication for the property tuning and practical application of metal nanoclusters in the future.- Published
- 2020
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14. Optimized Electronic Configuration to Improve the Surface Absorption and Bulk Conductivity for Enhanced Oxygen Evolution Reaction.
- Author
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Li X, Sun Y, Wu Q, Liu H, Gu W, Wang X, Cheng Z, Fu Z, and Lu Y
- Abstract
The composition and structure are crucial for stabilizing an appropriate electronic configuration (unit e
g electron for example) in high-efficiency electrocatalysts for the oxygen evolution reaction (OER). Here, an excellent platform to investigate the roles of the composition and structure in tuning the electron configuration for higher OER efficiency is provided by layered perovskite oxides with subtle variations of composition and structure (doping with 0%, 50%, and 100% cobalt in the Bi7 Fe3 Ti3 O21 ). The crystal structures were analyzed by X-ray diffraction refinement, and the electronic structures were calculated based on X-ray absorption spectroscopy and magnetization vs temperature plots according to the Curie-Weiss law. The results indicate that the elongation of oxygen octahedra along the c-axis in layered perovskite could stabilize Co ions in the intermediate spin (IS) ( t2g )5 ( eg )1 state, resulting in dramatically enhanced electronic conductivity and absorption capacity. Subsequently, the OER efficiency of sample with 100% Co was found to be (incredibly) 100 times higher than that of the sample with 0% Co, with the current density increased from 0.13 to 43 mA/cm2 (1.8 V vs reversible hydrogen electrode); the Tafel slope was reduced from 656 to 87 mV/dec; and double-layer capacity enhanced from 174 to 4193 μF/cm2 . This work reveals that both the composition and structure should be taken into account to stabilize a suitable electronic structure such as IS Co ions with moderate absorption and benign electronic conductivity for high-efficiency catalysis of the OER.- Published
- 2019
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15. Roads to Rome: Role of Multiple Cassettes in Cyanobactin RiPP Biosynthesis.
- Author
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Gu W, Sardar D, Pierce E, and Schmidt EW
- Subjects
- Alkylation, Amino Acid Sequence, Cyclization, Escherichia coli metabolism, Escherichia coli Proteins chemistry, Escherichia coli Proteins metabolism, Intramolecular Transferases chemistry, Intramolecular Transferases metabolism, Peptides, Cyclic chemistry, Peptides, Cyclic metabolism, Protein Domains, Protein Precursors chemistry, Protein Processing, Post-Translational, Stochastic Processes, Substrate Specificity, Peptides, Cyclic biosynthesis, Protein Precursors metabolism
- Abstract
Ribosomally synthesized and post-translationally modified peptides (RiPPs) are ubiquitous natural products. Bioactive RiPPs are produced from a precursor peptide, which is modified by enzymes. Usually, a single product is encoded in a precursor peptide. However, in cyanobactins and several other RiPP pathways, a single precursor peptide encodes multiple bioactive products flanking with recognition sequences known as "cassettes". The role of multiple cassettes in one peptide is mysterious, but in general their presence is a marker of biosynthetic plasticity. Here, we show that in cyanobactin biosynthesis the presence of multiple cassettes confers distributive enzyme processing to multiple steps of the pathway, a feature we propose to be a hallmark of multicassette RiPPs. TruD heterocyclase is stochastic and distributive. Although a canonical biosynthetic route is favored with certain substrates, every conceivable biosynthetic route is accepted. Together, these factors afford greater plasticity to the biosynthetic pathway by equalizing the processing of each cassette, enabling access to chemical diversity.
- Published
- 2018
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16. Facile Insertion of Rh and Ir into a Boron-Phenyl Bond, Leading to Boryl/Bis(phosphine) PBP Pincer Complexes.
- Author
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Shih WC, Gu W, MacInnis MC, Timpa SD, Bhuvanesh N, Zhou J, and Ozerov OV
- Abstract
The unexpectedly facile insertion of Rh or Ir into a B-Ph bond (reversible for Rh) converts a borane/bis(phosphine) precursor into a boryl/bis(phosphine) PBP pincer ligand. Interconversions between the boryl/borane/borate central functionality are demonstrated in reactions with dihydrogen.
- Published
- 2016
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17. Benzene selectivity in competitive arene hydrogenation: effects of single-site catalyst···acidic oxide surface binding geometry.
- Author
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Gu W, Stalzer MM, Nicholas CP, Bhattacharyya A, Motta A, Gallagher JR, Zhang G, Miller JT, Kobayashi T, Pruski M, Delferro M, and Marks TJ
- Abstract
Organozirconium complexes are chemisorbed on Brønsted acidic sulfated ZrO2 (ZrS), sulfated Al2O3 (AlS), and ZrO2-WO3 (ZrW). Under mild conditions (25 °C, 1 atm H2), the supported Cp*ZrMe3, Cp*ZrBz3, and Cp*ZrPh3 catalysts are very active for benzene hydrogenation with activities declining with decreasing acidity, ZrS ≫ AlS ≈ ZrW, arguing that more Brønsted acidic oxides (those having weaker corresponding conjugate bases) yield stronger surface organometallic electrophiles and for this reason have higher benzene hydrogenation activity. Benzene selective hydrogenation, a potential approach for carcinogenic benzene removal from gasoline, is probed using benzene/toluene mixtures, and selectivities for benzene hydrogenation vary with catalyst as ZrBz3(+)/ZrS(-), 83% > Cp*ZrMe2(+)/ZrS(-), 80% > Cp*ZrBz2(+)/ZrS(-), 67% > Cp*ZrPh2(+)/ZrS(-), 57%. For Cp*ZrBz2(+)/ZrS(-), which displays the highest benzene hydrogenation activity with moderate selectivity in benzene/toluene mixtures. Other benzene/arene mixtures are examined, and benzene selectivities vary with arene as mesitylene, 99%, > ethylbenzene, 86% > toluene, 67%. Structural and computational studies by solid-state NMR spectroscopy, XAS, and periodic DFT methods applied to supported Cp*ZrMe3 and Cp*ZrBz3 indicate that larger Zr···surface distances are present in more sterically encumbered Cp*ZrBz2(+)/AlS(-) vs Cp*ZrMe2(+)/AlS(-). The combined XAS, solid state NMR, and DFT data argue that the bulky catalyst benzyl groups expand the "cationic" metal center-anionic sulfated oxide surface distances, and this separation/weakened ion-pairing enables the activation/insertion of more sterically encumbered arenes and influences hydrogenation rates and selectivity patterns.
- Published
- 2015
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18. Ascorbic acid enhances Tet-mediated 5-methylcytosine oxidation and promotes DNA demethylation in mammals.
- Author
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Yin R, Mao SQ, Zhao B, Chong Z, Yang Y, Zhao C, Zhang D, Huang H, Gao J, Li Z, Jiao Y, Li C, Liu S, Wu D, Gu W, Yang YG, Xu GL, and Wang H
- Subjects
- 5-Methylcytosine chemistry, Animals, Ascorbic Acid chemistry, DNA chemistry, DNA Methylation, Dioxygenases, Mice, Oxidation-Reduction, 5-Methylcytosine metabolism, Ascorbic Acid metabolism, DNA metabolism, DNA-Binding Proteins metabolism, Proto-Oncogene Proteins metabolism
- Abstract
DNA hydroxymethylation and its mediated DNA demethylation are critical for multiple cellular processes, for example, nuclear reprogramming, embryonic development, and many diseases. Here, we demonstrate that a vital nutrient ascorbic acid (AA), or vitamin C (Vc), can directly enhance the catalytic activity of Tet dioxygenases for the oxidation of 5-methylcytosine (5mC). As evidenced by changes in intrinsic fluorescence and catalytic activity of Tet2 protein caused by AA and its oxidation-resistant derivatives, we further show that AA can uniquely interact with the C-terminal catalytic domain of Tet enzymes, which probably promotes their folding and/or recycling of the cofactor Fe(2+). Other strong reducing chemicals do not have a similar effect. These results suggest that AA also acts as a cofactor of Tet enzymes. In mouse embryonic stem cells, AA significantly increases the levels of all 5mC oxidation products, particularly 5-formylcytosine and 5-carboxylcytosine (by more than an order of magnitude), leading to a global loss of 5mC (∼40%). In cells deleted of the Tet1 and Tet2 genes, AA alters neither 5mC oxidation nor the overall level of 5mC. The AA effects are however restored when Tet2 is re-expressed in the Tet-deficient cells. The enhancing effects of AA on 5mC oxidation and DNA demethylation are also observed in a mouse model deficient in AA synthesis. Our data establish a direct link among AA, Tet, and DNA methylation, thus revealing a role of AA in the regulation of DNA modifications.
- Published
- 2013
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19. One-pot microwave synthesis of water-dispersible, ultraphoto- and pH-stable, and highly fluorescent silicon quantum dots.
- Author
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He Y, Zhong Y, Peng F, Wei X, Su Y, Lu Y, Su S, Gu W, Liao L, and Lee ST
- Abstract
Fluorescent silicon quantum dots (SiQDs) are facilely prepared via one-pot microwave-assisted synthesis. The as-prepared SiQDs feature excellent aqueous dispersibility, robust photo- and pH-stability, strong fluorescence, and favorable biocompatibility. Experiments show the SiQDs are superbly suitable for long-term immunofluorescent cellular imaging. Our results provide a new and invaluable methodology for large-scale synthesis of high-quality SiQDs, which are promising for various optoelectronic and biological applications.
- Published
- 2011
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20. Carbon-carbon coupling of C(sp3)-F bonds using alumenium catalysis.
- Author
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Gu W, Haneline MR, Douvris C, and Ozerov OV
- Abstract
Dialkylalumenium cation equivalents coupled with the hexabromocarborane anion function as efficient and long-lived catalysts for alkylation of aliphatic C-F bonds (alkylative defluorination or AlkDF) by alkylaluminum compounds. Only C(sp(3))-F bonds undergo AlkDF; C(sp(2))-F bonds are unaffected. Examples of compounds undergoing AlkDF include monofluoroalkanes, gem-difluorocyclopentane, and compounds containing a CF(3) group attached to either an aryl or an alkyl substituent. Conversion of C-F bonds to C-Me bonds is accomplished with high fidelity using Me(3)Al as the stoichiometric reagent. In reactions with Et(3)Al, hydrodefluorination of the C-F bonds is competitive with alkylation, indicative presumably of competitive hydride vs alkyl transfer from Et(3)Al. In a trialkylaluminum reagent, 1.1-1.4 alkyl groups per Al can be used to replace C-F bonds. Organoaluminum compounds efficiently remove water from the reaction mixture, obviating the need for rigorously dry solvents. Some organoaluminum compounds, especially methylaluminoxane, are capable of AlkDF with more reactive substrates, but catalysis by alumenium offers an advantage over the uncatalyzed C-F activation in terms of both increased rate and, in some cases, a dramatically increased selectivity.
- Published
- 2009
- Full Text
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21. Tightly connected water wires facilitate fast proton uptake at the proton entrance of proton pumping proteins.
- Author
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Gu W and Helms V
- Subjects
- Escherichia coli enzymology, Models, Molecular, Proton Pumps metabolism, Proton-Translocating ATPases metabolism, Solutions, Water metabolism, Proton Pumps chemistry, Proton-Translocating ATPases chemistry, Water chemistry
- Abstract
Tightly connected water wires (TCW) exist in systems with nonconfined water like the solvated membrane proton pump system. The TCWs that connect to the negatively charged proton entrance facilitate the fast proton uptake of the proton pump. They function as a direct proton bridge or/and stabilizer of protons within the Coulomb cage of the proton entrance. Negatively charged residue(s) at the proton entrance induce a large population of long TCWs. Additional negatively charged residues increase the population of such long TCWs and, thus, raise the possibility to capture proton from the solution.
- Published
- 2009
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22. Group 10 and 11 metal boratranes (Ni, Pd, Pt, CuCl, AgCl, AuCl, and Au+) derived from a triphosphine-borane.
- Author
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Sircoglou M, Bontemps S, Bouhadir G, Saffon N, Miqueu K, Gu W, Mercy M, Chen CH, Foxman BM, Maron L, Ozerov OV, and Bourissou D
- Subjects
- Copper chemistry, Gold chemistry, Gold Compounds chemistry, Lead chemistry, Models, Molecular, Molecular Conformation, Nickel chemistry, Organometallic Compounds chemical synthesis, Palladium chemistry, Quantum Theory, Silver Compounds chemistry, Boranes chemistry, Metals chemistry, Organometallic Compounds chemistry, Phosphines chemistry
- Abstract
The ambiphilic triphosphine-borane ligand 1 {TPB = [o-iPr2P-(C6H4)3B} readily coordinates to all group 10 and 11 metals to afford a complete series of metal boratranes (TPB)[M] 2-8 (2: M = Ni, 3: M = Pd, 4: M = Pt, 5: M = CuCl, 6: M = AgCl, 7: M = AuCl, 8: M = Au+). Spectroscopic and structural characterization unambiguously establishes the presence of M-B interactions in all of these complexes. The first evidence for borane coordination to copper and silver is provided, and the Au-->B interaction is shown to persist upon chloride abstraction. Experimental and theoretical considerations indicate that the M-->B interaction is strongest in the Pt and Au complexes. The influence of the oxidation state and charge of the metal is substantiated, and the consequences of relativistic effects are discussed. The coordination of the sigma-acceptor borane ligand is found to induce a significant bathochromic shift of the UV-vis spectra, the Ni, Pd, and Pt complex presenting strong absorptions in the visible range. In addition, all of the group 10 and 11 metal boratranes adopt C3 symmetry both in the solid state and in solution. The central M-->B interaction is found to moderately influence the degree of helicity and configurational stability of these three-bladed propellers, and DFT calculations support a dissociative pathway for the inversion process.
- Published
- 2008
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23. The electronic structure of Mn in oxides, coordination complexes, and the oxygen-evolving complex of photosystem II studied by resonant inelastic X-ray scattering.
- Author
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Glatzel P, Bergmann U, Yano J, Visser H, Robblee JH, Gu W, de Groot FM, Christou G, Pecoraro VL, Cramer SP, and Yachandra VK
- Subjects
- Electrons, Oxygen chemistry, Scattering, Radiation, Spinacia oleracea chemistry, Thermodynamics, X-Rays, Manganese chemistry, Manganese Compounds chemistry, Oxides chemistry, Photosystem II Protein Complex chemistry
- Abstract
Resonant inelastic X-ray scattering (RIXS) was used to collect Mn K pre-edge spectra and to study the electronic structure in oxides, molecular coordination complexes, as well as the S1 and S2 states of the oxygen-evolving complex (OEC) of photosystem II (PS II). The RIXS data yield two-dimensional plots that can be interpreted along the incident (absorption) energy or the energy transfer axis. The second energy dimension separates the pre-edge (predominantly 1s to 3d transitions) from the main K-edge, and a detailed analysis is thus possible. The 1s2p RIXS final-state electron configuration along the energy transfer axis is identical to conventional L-edge absorption spectroscopy, and the RIXS spectra are therefore sensitive to the Mn spin state. This new technique thus yields information on the electronic structure that is not accessible in conventional K-edge absorption spectroscopy. The line splittings can be understood within a ligand field multiplet model, i.e., (3d,3d) and (2p,3d) two-electron interactions are crucial to describe the spectral shapes in all systems. We propose to explain the shift of the K pre-edge absorption energy upon Mn oxidation in terms of the effective number of 3d electrons (fractional 3d orbital population). The spectral changes in the Mn 1s2p(3/2) RIXS spectra between the PS II S1 and S2 states are small compared to that of the oxides and two of the coordination complexes (Mn(III)(acac)3 and Mn(IV)(sal)2(bipy)). We conclude that the electron in the step from S1 to S2 is transferred from a strongly delocalized orbital.
- Published
- 2004
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24. Heterogeneous catalysis using a nanostructured solid acid resin based on lyotropic liquid crystals.
- Author
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Xu Y, Gu W, and Gin DL
- Abstract
The catalytic reactivity and selectivity of the first example of a nanostructured solid acid resin (1) are described. This new type of solid acid catalyst is formed by the self-assembly and copolymerization of two acidic lyotropic liquid crystals (LLCs), affording a columnar hexagonal polymer network with monodisperse nanochannels lined with sulfonic acid groups. The performance of this material as a heterogeneous catalyst was compared against that of two commercially available, amorphous sulfonic acid resins: Amberlyst-15 and Nafion NR50. Using the acid-catalyzed esterification of benzyl alcohol with 1-hexanoic acid in dry toluene as a test reaction, it was found that resin 1 displayed only slightly lower overall reactivity as compared to Amberlyst-15 and Nafion NR50 but more than an order of magnitude higher selectivity for the desired ester product over dibenzyl ether side-product. Control experiments revealed that the higher product selectivity is not due to differences in relative acidity between the nanostructured acid resin and the two amorphous resins. Instead, it appears that a large component of the enhanced selectivity is due to the regular nanostructure present in the LLC resin, which affords a much more uniform local acid microenvironment for reactions to occur. Resin 1 can also be recycled with almost complete recovery of catalytic activity and selectivity, and with essentially no leaching of reactive groups into the solution phase.
- Published
- 2004
- Full Text
- View/download PDF
25. Chemically distinct Ni sites in the A-cluster in subunit beta of the acetyl-CoA decarbonylase/synthase complex from Methanosarcina thermophila: Ni L-edge absorption and X-ray magnetic circular dichroism analyses.
- Author
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Funk T, Gu W, Friedrich S, Wang H, Gencic S, Grahame DA, and Cramer SP
- Subjects
- Aldehyde Oxidoreductases metabolism, Binding Sites, Circular Dichroism methods, Multienzyme Complexes metabolism, Nickel metabolism, Protein Subunits chemistry, Protein Subunits metabolism, Recombinant Proteins chemistry, Recombinant Proteins metabolism, Spectrometry, Fluorescence, Spectrometry, X-Ray Emission methods, Aldehyde Oxidoreductases chemistry, Methanosarcina enzymology, Multienzyme Complexes chemistry, Nickel chemistry
- Abstract
The 5-subunit-containing acetyl-CoA decarbonylase/synthase (ACDS) complex plays an important role in methanogenic Archaea that convert acetate to methane, by catalyzing the central reaction of acetate C-C bond cleavage in which acetyl-CoA serves as the acetyl donor substrate reacting at the ACDS beta subunit active site. The properties of Ni in the active site A-cluster in the ACDS beta subunit from Methanosarcina thermophila were investigated. A recombinant, C-terminally truncated form of the beta subunit was employed, which mimics the native subunit previously isolated from the ACDS complex, and contains an A-cluster composed of an [Fe(4)S(4)] center bridged to a binuclear Ni-Ni site. The electronic structures of these two Ni were studied using L-edge absorption and X-ray magnetic circular dichroism (XMCD) spectroscopy. The L-edge absorption data provided evidence for two distinct Ni species in the as-isolated enzyme, one with low-spin Ni(II) and the other with high-spin Ni(II). XMCD spectroscopy confirmed that the species producing the high-spin signal was paramagnetic. Upon treatment with Ti(3+) citrate, an additional Ni species emerged, which was assigned to Ni(I). By contrast, CO treatment of the reduced enzyme converted nearly all of the Ni in the sample to low-spin Ni(II). The results implicate reaction of a high-spin tetrahedral Ni site with CO to form an enzyme-CO adduct transformed to a low-spin Ni(II) state. These findings are discussed in relation to the mechanism of C-C bond activation, in connection with the model of the beta subunit A-cluster developed from companion Ni and Fe K edge, XANES, and EXAFS studies.
- Published
- 2004
- Full Text
- View/download PDF
26. The A-cluster in subunit beta of the acetyl-CoA decarbonylase/synthase complex from Methanosarcina thermophila: Ni and Fe K-edge XANES and EXAFS analyses.
- Author
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Gu W, Gencic S, Cramer SP, and Grahame DA
- Subjects
- Circular Dichroism, Computer Simulation, Iron chemistry, Models, Molecular, Nickel chemistry, Protein Subunits, Spectrum Analysis methods, Aldehyde Oxidoreductases chemistry, Methanosarcina enzymology, Multienzyme Complexes chemistry
- Abstract
The acetyl-CoA decarbonylase/synthase (ACDS) complex catalyzes the cleavage of acetyl-CoA in methanogens that metabolize acetate to CO(2) and CH(4), and also carries out acetyl-CoA synthesis during growth on one-carbon substrates. The ACDS complex contains five subunits, among which beta possesses an Ni-Fe-S active-site metal cluster, the A-cluster, at which reaction with acetyl-CoA takes place, generating an acetyl-enzyme species poised for C-C bond cleavage. We have used Ni and Fe K fluorescence XANES and EXAFS analyses to characterize these metals in the ACDS beta subunit, expressed as a C-terminally shortened form. Fe XANES and EXAFS confirmed the presence of an [Fe(4)S(4)] cluster, with typical Fe-S and Fe-Fe distances of 2.3 and 2.7 A respectively. An Fe:Ni ratio of approximately 2:1 was found by Kalphabeta fluorescence analysis, indicating 2 Ni per [Fe(4)S(4)]. Ni XANES simulations were consistent with two distinct Ni sites in cluster A, and the observed spectrum could be modeled as the sum of separate square planar and tetrahedral Ni sites. Treatment of the beta subunit with Ti(3+) citrate resulted in shifts to lower energy, implying significant reduction of the [Fe(4)S(4)] center, along with conversion of a smaller fraction of Ni(II) to Ni(I). Reaction with CO in the presence of Ti(3+) citrate generated a unique Ni XANES spectrum, while effects on the Fe-edge were not very different from the reaction with Ti(3+) alone. Ni EXAFS revealed an average Ni coordination of 2.5 S at 2.19 A and 1.5 N/O at 1.89 A. A distinct feature at approximately 2.95 A most likely results from Ni-Ni interaction. The methanogen beta subunit A-cluster is proposed to consist of an [Fe(4)S(4)] cluster bridged to an Ni-Ni center with one Ni in square planar geometry coordinated by 2 S + 2 N and the other approximately tetrahedral with 3 S + 1 N/O ligands. The electronic consequences of two distinct Ni geometries are discussed.
- Published
- 2003
- Full Text
- View/download PDF
27. Characterization of chromodulin by X-ray absorption and electron paramagnetic resonance spectroscopies and magnetic susceptibility measurements.
- Author
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Jacquamet L, Sun Y, Hatfield J, Gu W, Cramer SP, Crowder MW, Lorigan GA, Vincent JB, and Latour JM
- Subjects
- Chromium chemistry, Electron Spin Resonance Spectroscopy methods, Magnetics, Spectrometry, X-Ray Emission methods, Carrier Proteins chemistry
- Abstract
The biologically active form of the essential trace element chromium is believed to be the oligopeptide chromodulin. Chromodulin binds four chromic ions before binding at or near the active site of activating insulin receptor and subsequently potentiating the tyrosine kinase activity of the receptor. Charge balance arguments and preliminary spectroscopic studies suggested that the chromic centers might be part of a multinuclear assembly. Using a combination of X-ray absorption and electron paramagnetic resonance spectroscopies and variable-temperature magnetic susceptibility measurements, we found that holochromodulin is shown to possess an antiferromagnetically coupled trinuclear assembly which probably weakly interacts with a fourth chromium center. The chromium centers possess octahedron coordination comprised of oxygen-based ligation, presumably derived primarily from oligopeptide-supplied carboxylate groups. X-ray absorption data cannot be reproduced with the presence of sulfur atom(s), indicating that the cysteine thiolate group does not coordinate to the chromium centers. Thus, chromodulin possesses a unique type of multinuclear assembly, distinct from those known in other bioinorganic systems.
- Published
- 2003
- Full Text
- View/download PDF
28. Electronic structure of Ni complexes by X-ray resonance Raman spectroscopy (resonant inelastic X-ray scattering).
- Author
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Glatzel P, Bergmann U, Gu W, Wang H, Stepanov S, Mandimutsira BS, Riordan CG, Horwitz CP, Collins T, and Cramer SP
- Subjects
- Oxidation-Reduction, Scattering, Radiation, X-Rays, Nickel chemistry, Organometallic Compounds chemistry, Spectrum Analysis, Raman methods
- Abstract
The potential of 1s2p resonant inelastic (Raman) X-ray scattering (RIXS) is demonstrated for a series of Ni coordination complexes. In this technique, incident and scattered photon energies lie in the hard X-ray range (>5 keV). The 1s2p RIXS contour plots provide information that is complementary to K-edge and L-edge spectroscopy. RIXS spectroscopy promises to be a valuable probe of electronic structure
- Published
- 2002
- Full Text
- View/download PDF
29. Dioxygen activation by a nickel thioether complex: characterization of a Ni(III)(2)(mu-O)(2) core.
- Author
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Mandimutsira BS, Yamarik JL, Brunold TC, Gu W, Cramer SP, and Riordan CG
- Published
- 2001
- Full Text
- View/download PDF
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