1. Generation of Human Immunodeficiency Virus–1 Long Terminal Repeat Reporter Genes by Rapid Polymerase Chain Reaction–Mediated Mutagenesis
- Author
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Zongxing Yang, Ling Xu, Nanping Wu, Juan Wang, Jin Yang, and Hangjun Lv
- Subjects
Reporter gene ,General transcription factor ,Biochemistry (medical) ,Clinical Biochemistry ,Human immunodeficiency virus (HIV) ,Biology ,medicine.disease_cause ,Molecular biology ,Long terminal repeat ,Virus ,law.invention ,law ,Transcription (biology) ,medicine ,Overlap extension polymerase chain reaction ,Polymerase chain reaction - Abstract
Objective: The development of a human immunodeficiency virus (HIV)–1 promoter reporter system is critical for investigating transcription activity of the virus. We designed a modified overlap extension PCR method for single round site-directed mutagenesis of the long terminal repeat (LTR) segment of HIV-1. Methods: The procedure consists of overlap extension PCR, DpnI digestion, and product transformation. Wild-type and serial sequence deletion clones of HIV-1 LTR were constructed. Basal transcription activity was also measured. Results: The overall efficiency for obtaining the desired products was 53.2%. The reporter assay indicated the importance of the second NF-ĸB cis-element and surrounding regions in mediating the regulation of HIV-1 transcription. Conclusion: The technique we investigated is suitable for highthroughput functional studies of virus-host interaction.
- Published
- 2013