1. The complete mtDNA genome of Triplophysa dorsalis (Cypriniformes, Balitoridae, Cobitoidea): genome characterization and phylogenetic analysis.
- Author
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Lei, Dujuan, Conteh Kanu, Unisa, Zhao, Guang, Xie, Peng, Yuan, Hao, Li, Yu, Niu, Jiangong, and Ma, Xufa
- Subjects
CYPRINIFORMES ,OSTEICHTHYES ,MITOCHONDRIAL DNA ,TRANSFER RNA ,RIBOSOMAL RNA - Abstract
Based upon the morphological characters, the genusTriplophysa(plateau Loach) is a highly diverse group in the family Balitoridae (or Cypriniformes, Cobitoidea) with 133 valid species. Therefore, the taxonomic relationship of this species at the genetic level remains ambiguous. In the present study, we sequenced the complete mitochondrial genome ofTriplophysa dorsalis. In order to understand its position and genetic background at the gene level, the characteristics of mitochondrial DNA sequences and phylogenetic relationship were examined. The mitochondrial genome ofT. dorsalisis similar to those of the typical vertebrates, 16 572 bp in length, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and a non-coding control region (D-loop). All genes were encoded on the heavy strand except forND6and 8 tRNA genes. The overall base composition of the heavy strand was 28.16%, 28.41%, 25.62% and 17.82% for A, T, C and G, respectively. Phylogenetic analyses showed that the sevenTriplophysaspecies clustered together withT. dorsalisto form a sister group withTriplophysa strauchii, T. bleekeri, T. stoliczkaiandT. bombifrons. The two generaTriplophysaandBarbatulaformed a sister-group relationship, the speciesHomatula potaninilocated in the intermediate position, and the genusLeptobotia elongatawas in the basal position in the subfamily Nemacheilidae. Further investigations with moreTriplophysaspecies need to be performed for better understanding of the evolutionary history of this fascinating genus. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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