1. Single nucleotide polymorphism-based microarray analysis for the diagnosis of hydatidiform moles
- Author
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Huijuan Shi, Yingjun Xie, Xiaojuan Pei, Xiaofang Sun, Xuying Zhuang, Jialing He, Jianzhu Wu, Yu Dong, and Huiqun Wu
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Adult ,0301 basic medicine ,Cancer Research ,Genotype ,Aneuploidy ,Gestational Age ,Single-nucleotide polymorphism ,Biology ,Polymorphism, Single Nucleotide ,Biochemistry ,Loss of heterozygosity ,03 medical and health sciences ,0302 clinical medicine ,Pregnancy ,Genetics ,medicine ,Humans ,SNP ,Copy-number variation ,Molecular Biology ,In Situ Hybridization, Fluorescence ,Oligonucleotide Array Sequence Analysis ,single nucleotide polymorphism-based microarray ,villous tissue ,Microarray analysis techniques ,Hydatidiform Mole ,Articles ,medicine.disease ,spontaneous abortion ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Molecular Medicine ,Female ,Microsatellite Repeats ,SNP array - Abstract
In clinical diagnostics, single nucleotide polymorphism (SNP)-based microarray analysis enables the detection of copy number variations (CNVs), as well as copy number neutral regions, that are absent of heterozygosity throughout the genome. The aim of the present study was to evaluate the effectiveness and sensitivity of SNP-based microarray analysis in the diagnosis of hydatidiform mole (HM). By using whole-genome SNP microarray analysis, villous genotypes were detected, and the ploidy of villous tissue was determined to identify HMs. A total of 66 villous tissues and two twin tissues were assessed in the present study. Among these samples, 11 were triploid, one was tetraploid, 23 were abnormal aneuploidy, three were complete genome homozygosity, and the remaining ones were normal ploidy. The most noteworthy finding of the present study was the identification of six partial HMs and three complete HMs from those samples that were not identified as being HMs on the basis of the initial diagnosis of experienced obstetricians. This study has demonstrated that the application of an SNP-based microarray analysis was able to increase the sensitivity of diagnosis for HMs with partial and complete HMs, which makes the identification of these diseases at an early gestational age possible.
- Published
- 2016
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