13 results on '"Xie, Qi"'
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2. Sustainable Agriculture: From Sweet Sorghum Planting and Ensiling to Ruminant Feeding.
- Author
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Xie, Qi and Xu, Zhihong
- Published
- 2019
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3. Two Faces of One Seed: Hormonal Regulation of Dormancy and Germination.
- Author
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Shu, Kai, Liu, Xiao-dong, Xie, Qi, and He, Zu-hua
- Subjects
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DORMANCY in plants , *GERMINATION , *PLANT life cycles - Abstract
Seed plants have evolved to maintain the dormancy of freshly matured seeds until the appropriate time for germination. Seed dormancy and germination are distinct physiological processes, and the transition from dormancy to germination is not only a critical developmental step in the life cycle of plants but is also important for agricultural production. These processes are precisely regulated by diverse endogenous hormones and environmental cues. Although ABA (abscisic acid) and GAs (gibberellins) are known to be the primary phytohormones that antagonistically regulate seed dormancy, recent findings demonstrate that another phytohormone, auxin, is also critical for inducing and maintaining seed dormancy, and therefore might act as a key protector of seed dormancy. In this review, we summarize our current understanding of the sophisticated molecular networks involving the critical roles of phytohormones in regulating seed dormancy and germination, in which AP2-domain-containing transcription factors play key roles. We also discuss the interactions (crosstalk) of diverse hormonal signals in seed dormancy and germination, focusing on the ABA/GA balance that constitutes the central node. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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4. Ubiquitin–Proteasome System in ABA Signaling: From Perception to Action.
- Author
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Yu, Feifei, Wu, Yaorong, and Xie, Qi
- Subjects
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UBIQUITINATION , *PLANT growth , *PLANT hormones - Abstract
Protein post-translational modification (PTM) by ubiquitination has been observed during many aspects of plant growth, development, and stress responses. The ubiquitin–proteasome system precisely regulates phytohormone signaling by affecting protein activity, localization, assembly, and interaction ability. Abscisic acid (ABA) is a major phytohormone, and plays important roles in plants under normal or stressed growth conditions. The ABA signaling pathway is composed of phosphatases, kinases, transcription factors, and membrane ion channels. It has been reported that multiple ABA signaling transducers are subjected to the regulations by ubiquitination. In particular, recent studies have identified different types of E3 ligases that mediate ubiquitination of ABA receptors in different cell compartments. This review focuses on modulation of these components by monoubiquitination or polyubiquitination that occurs in the plasma membrane, endomembranes, and from the cytosol to the nucleus; this implies the existence of retrograde and trafficking processes that are regulated by ubiquitination in ABA signaling. A number of single-unit E3 ligases, components of multi-subunit E3 ligases, E2s, and specific subunits of the 26S proteasome involved in ABA signal regulation are discussed. Dissecting the precise functions of ubiquitination in the ABA pathway may help us understand key factors in the signaling of other phytohormones regulated by ubiquitination and other types of PTMs. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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- View/download PDF
5. ESCRT-I Component VPS23A Is Targeted by E3 Ubiquitin Ligase XBAT35 for Proteasome-Mediated Degradation in Modulating ABA Signaling.
- Author
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Yu, Feifei, Cao, Xiaoqiang, Liu, Guangchao, Wang, Qian, Xia, Ran, Zhang, Xiangyun, and Xie, Qi
- Abstract
A myriad of abiotic stress responses in plants are controlled by abscisic acid (ABA) signaling. ABA receptors can be degraded by both the 26S proteasome pathway and vacuolar degradation pathway after processing via the endosomal sorting complex required for transport (ESCRT) proteins. Despite being essential for ABA signaling, the upstream regulators of ESCRTs remain unknown. Here, we report that the ESCRT-I component VPS23A is an unstable protein that is degraded via the ubiquitin-proteasome system (UPS). The UEV domain of VPS23A physically interacts with the two PSAP motifs of XBAT35, an E3 ubiquitin ligase, and this interaction results in the deposition of K48 polyubiquitin chains on VPS23A, marking it for degradation by 26S proteasomes. We showed that XBAT35 in plants is a positive regulator of ABA responses that acts via the VPS23A/PYL4 complex, specifically by accelerating VPS23A turnover and thereby increasing accumulation of the ABA receptor PYL4. This work deciphers how an ESCRT component is regulated in plants and deepens our understanding of plant stress responses by illustrating a mechanism whereby crosstalk between the UPS and endosome-vacuole-mediated degradation pathways controls ABA signaling. The ESCRT-I component VPS23A recognizes the ABA receptor PYL4 for endosome-vacuole-mediated degradation during ABA signaling. This study reveals that the E3 ubiquitin ligase XBAT35 accelerates VPS23A turnover through the 26S proteasome degradation pathway to maintain PYL4 protein homeostasis. This work illustrates a mechanism by which crosstalk between the ubiquitin-proteasome system and endosome-vacuole-mediated degradation pathways controls ABA signaling. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
6. ESCRT-I Component VPS23A Sustains Salt Tolerance by Strengthening the SOS Module in Arabidopsis.
- Author
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Lou, Lijuan, Yu, Feifei, Tian, Miaomiao, Liu, Guangchao, Wu, Yaorong, Wu, Yujiao, Xia, Ran, Pardo, Jose M., Guo, Yan, and Xie, Qi
- Abstract
The Salt-Overly-Sensitive (SOS) signaling module, comprising the sodium-transport protein SOS1 and the regulatory proteins SOS2 and SOS3, is well known as the central salt excretion system, which helps protect plants against salt stress. Here we report that VPS23A, a component of the ESCRT (endosomal sorting complex required for transport), plays an essential role in the function of the SOS module in conferring plant salt tolerance. VPS23A enhances the interaction of SOS2 and SOS3. In the presence of salt stress, VPS23A positively regulates the redistribution of SOS2 to the plasma membrane, which then activates the antiporter activity of SOS1 to reduce Na+ accumulation in plant cells. Genetic evidence demonstrated that plant salt tolerance achieved by the overexpression of SOS2 and SOS3 dependeds on VPS23A. Taken together, our results revealed that VPS23A is a crucial regulator of the SOS module and affects the localization of SOS2 to the cell membrane. Moreover, the strong salt tolerance of Arabidopsis seedlings conferred by the engineered membrane-bound SOS2 revealed the significance of SOS2 sorting to the cell membrane in achieving its function, providing a potential strategy for crop salt tolerance engineering. This study reveals that the ESCRT-I component VPS23A confers salt tolerance by strengthening the SOS module. Under salt stress, VPS23A recruits SOS2 to the membrane and enhances the affinity between SOS2 and SOS3 to enhance SOS1 activity and thus regulate Na+/K+ homeostasis in plants. Interesingly, this study shows that an engineered membrane-bound SOS2 can greatly enhanceplant salt tolerance, providing a potential strategy for crop salt tolerance engineering. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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7. A Bunyavirus-Inducible Ubiquitin Ligase Targets RNA Polymerase IV for Degradation during Viral Pathogenesis in Rice.
- Author
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Zhang, Chao, Wei, Ying, Xu, Le, Wu, Kang-Cheng, Yang, Liang, Shi, Chao-Nan, Yang, Guo-Yi, Chen, Dong, Yu, Fei-Fei, Xie, Qi, Ding, Shou-Wei, and Wu, Jian-Guo
- Abstract
The ubiquitin-proteasome system (UPS) is an important post-translational regulatory mechanism that controls many cellular functions in eukaryotes. Here, we show that stable expression of P3 protein encoded by Rice grassy stunt virus (RGSV), a negative-strand RNA virus in the Bunyavirales , causes developmental abnormities similar to the disease symptoms caused by RGSV, such as dwarfing and excess tillering, in transgenic rice plants. We found that both transgenic expression of P3 and RGSV infection induce ubiquitination and UPS-dependent degradation of rice NUCLEAR RNA POLYMERASE D1a (OsNRPD1a), one of two orthologs of the largest subunit of plant-specific RNA polymerase IV (Pol IV), which is required for RNA-directed DNA methylation (RdDM). Furthermore, we identified a P3-inducible U-box type E3 ubiquitin ligase, designated as P3-inducible protein 1 (P3IP1), which interacts with OsNRPD1a and mediates its ubiquitination and UPS-dependent degradation in vitro and in vivo. Notably, both knockdown of OsNRPD1 and overexpression of P3IP1 in rice plants induced developmental phenotypes similar to RGSV disease symptomss. Taken together, our findings reveal a novel virulence mechanism whereby plant pathogens target host RNA Pol IV for UPS-dependent degradation to induce disease symptoms. Our study also identified an E3 ubiquitin ligase, which targets the RdDM compotent NRPD1 for UPS-mediated degradation in rice. The ubiquitin-proteasome system (UPS) regulates many cellular functions in eukaryotic cells. This study reveals that a Bunyavirus-encoded virulence protein, P3, promotes the UPS-mediated degradation of an RdDM component, OsNRPD1, via a U-box type E3 ubiquitin ligase P3IP1, leading to disease symptom development in rice. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
8. Control of Bird Feeding Behavior by Tannin1 through Modulating the Biosynthesis of Polyphenols and Fatty Acid-Derived Volatiles in Sorghum.
- Author
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Xie, Peng, Shi, Jiayang, Tang, Sanyuan, Chen, Chengxuan, Khan, Aimal, Zhang, Fengxia, Xiong, Ying, Li, Chao, He, Wei, Wang, Guodong, Lei, Fumin, Wu, Yaorong, and Xie, Qi
- Abstract
Bird predation during seed maturation causes great loss to agricultural production. In this study, through GWAS analysis of a large-scale sorghum germplasm diversity panel, we identified that Tannin1 , which encodes a WD40 protein functioning in the WD40/MYB/bHLH complex, controls bird feeding behavior in sorghum. Metabolic profiling analysis showed that a group of sorghum accessions preferred by birds contain mutated tan1-a / b alleles and accumulate significantly lower levels of anthocyanins and condensed tannin compounds. In contrast, a variety of aromatic and fatty acid-derived volatiles accumulate at significantly higher levels in these bird-preference accessions. We subsequently conducted both sparrow feeding and sparrow volatile attractant assays, which confirmed, respectively, the antifeedant and attractant functions of these differentially accumulated metabolites. In addition, the connection between the biosynthesis pathway of anthocyanin and proanthocyanidin and the pathway of fatty acid–derived volatile biosynthesis was demonstrated by discovering that Tannin1 complex modulates fatty acid biosynthesis by regulating the expression of SbGL2 in sorghum, thus affecting the accumulation of fatty acid-derived volatiles. Taken together, our study identified Tannin1 as the gene underlying the major locus controlling bird feeding behavior in sorghum, illustrating an example of the identification of an ecologically impactful molecular mechanism from field observation and providing significant insights into the chemistry of bird–plant ecological interactions. This study identified that Tannin1 , which encodes a WD40 protein functioning in the WD40/MYB/bHLH complex, control bird feeding behavior in sorghum. Tannin1 was found to differentially modulate the biosynthesis of anthocyanins and proanthocyanidins as well as the accumulation of fatty acid-derived volatiles, providing significant insights into the chemistry of bird–plant ecological interactions. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
9. ERAD Tuning of the HRD1 Complex Component AtOS9 Is Modulated by an ER-Bound E2, UBC32.
- Author
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Chen, Qian, Liu, Ruijun, Wang, Qian, and Xie, Qi
- Published
- 2017
- Full Text
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10. ESCRT-I Component VPS23A Affects ABA Signaling by Recognizing ABA Receptors for Endosomal Degradation.
- Author
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Yu, Feifei, Lou, Lijuan, Tian, Miaomiao, Li, Qingliang, Ding, Yanglin, Cao, Xiaoqiang, Wu, Yaorong, Belda-Palazon, Borja, Rodriguez, Pedro L., Yang, Shuhua, and Xie, Qi
- Abstract
Recent discovery of PYR/PYL/RCAR-type abscisic acid (ABA) receptors has become one of most significant advances in plant science in the past decade. In mammals, endosomal sorting acts as an important pathway to downregulate different types of receptors, but its role in plant hormone signaling is poorly understood. Here, we report that an ubiquitin E2-like protein, VPS23A, which is a key component of ESCRT-I, negatively regulates ABA signaling. VPS23A has epistatic relationship with PYR / PYL / RCAR -type ABA receptors and disruption of VPS23A enhanced the activity of key kinase OST1 in the ABA signaling pathway under ABA treatment. Moreover, VPS23A interacts with PYR1/PYLs and K63-linked diubiquitin, and PYL4 possesses K63-linked ubiquitinated modification in vivo . Further analysis revealed that VPS23A affects the subcellular localization of PYR1 and the stability of PYL4. Taken together, our results suggest that VPS23A affects PYR1/PYL4 via vacuole-mediated degradation, providing an advanced understanding of both the turnover of ABA receptors and ESCRTs in plant hormone signaling. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
11. Tobacco RING E3 Ligase NtRFP1 Mediates Ubiquitination and Proteasomal Degradation of a Geminivirus-Encoded βC1.
- Author
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Shen, Qingtang, Hu, Tao, Bao, Min, Cao, Linge, Zhang, Huawei, Song, Fengmin, Xie, Qi, and Zhou, Xueping
- Subjects
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TOMATO yellow leaf curl virus , *PLANT protein analysis , *UBIQUITINATION - Abstract
The βC1 protein encoded by the Tomato yellow leaf curl China virus -associated betasatellite functions as a pathogenicity determinant. To better understand the molecular basis whereby βC1 functions in pathogenicity, a yeast two-hybrid screen of a tobacco cDNA library was carried out using βC1 as the bait. The screen revealed that βC1 interacts with a tobacco RING-finger protein designated NtRFP1, which was further confirmed by the bimolecular fluorescence complementation and co-immunoprecipitation assays in Nicotiana benthamiana cells. Expression of NtRFP1 was induced by βC1, and in vitro ubiquitination assays showed that NtRFP1 is a functional E3 ubiquitin ligase that mediates βC1 ubiquitination. In addition, βC1 was shown to be ubiquitinated in vivo and degraded by the plant 26S proteasome. After viral infection, plants overexpressing NtRFP1 developed attenuated symptoms, whereas plants with silenced expression of NtRFP1 showed severe symptoms. Other lines of evidence showed that NtRFP1 attenuates βC1-induced symptoms through promoting its degradation by the 26S proteasome. Taken together, our results suggest that tobacco RING E3 ligase NtRFP1 attenuates disease symptoms by interacting with βC1 to mediate its ubiquitination and degradation via the ubiquitin/26S proteasome system. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
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12. High-Efficiency Genome Editing in Arabidopsis Using YAO Promoter-Driven CRISPR/Cas9 System.
- Author
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Yan, Liuhua, Wu, Yaorong, Li, Hongju, Yang, Weicai, Wei, Shaowei, Hu, Ruolan, and Xie, Qi
- Subjects
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GENOME editing , *ARABIDOPSIS , *CRISPRS - Abstract
The article talks about editing high-efficiency genome in Arabidopsis, which uses YAO promoter-driven CRISPR/Cas9 system.
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- 2015
- Full Text
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13. Cautionary Notes on the Usage of abi1-2 and abi1-3 Mutants of Arabidopsis ABI1 for Functional Studies.
- Author
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Wu, Yaorong, Li, Yaqiong, Liu, Yongchang, and Xie, Qi
- Subjects
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ABSCISIC acid , *PLANT hormones , *ARABIDOPSIS - Abstract
A letter to the editor is presented in response to the article about Abscisic acid (ABA) in Arabidopsis in the previous issue.
- Published
- 2015
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