8 results on '"Jones, Steven J"'
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2. Author Correction: Transcription phenotypes of pancreatic cancer are driven by genomic events during tumor evolution
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Chan-Seng-Yue, Michelle, Kim, Jaeseung C., Wilson, Gavin W., Ng, Karen, Figueroa, Eugenia Flores, O’Kane, Grainne M., Connor, Ashton A., Denroche, Robert E., Grant, Robert C., McLeod, Jessica, Wilson, Julie M., Jang, Gun Ho, Zhang, Amy, Liang, Sheng-Ben, Borgida, Ayelet, Chadwick, Dianne, Kalimuthu, Sangeetha, Lungu, Ilinca, Bartlett, John M. S., Krzyzanowski, Paul M., Sandhu, Vandana, Tiriac, Hervé, Froeling, Fieke E. M., Karasinska, Joanna M., Topham, James T., Renouf, Daniel J., Schaeffer, David F., Jones, Steven J. M., Marra, Marco A., Laskin, Janessa, Chetty, Runjan, Stein, Lincoln D., Zogopoulos, George, Haibe-Kains, Benjamin, Campbell, Peter J., Tuveson, David A., Knox, Jennifer J., Fischer, Sandra E., Gallinger, Steven, and Notta, Faiyaz
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- 2020
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3. Transcription phenotypes of pancreatic cancer are driven by genomic events during tumor evolution
- Author
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Chan-Seng-Yue, Michelle, primary, Kim, Jaeseung C., additional, Wilson, Gavin W., additional, Ng, Karen, additional, Figueroa, Eugenia Flores, additional, O’Kane, Grainne M., additional, Connor, Ashton A., additional, Denroche, Robert E., additional, Grant, Robert C., additional, McLeod, Jessica, additional, Wilson, Julie M., additional, Jang, Gun Ho, additional, Zhang, Amy, additional, Dodd, Anna, additional, Liang, Sheng-Ben, additional, Borgida, Ayelet, additional, Chadwick, Dianne, additional, Kalimuthu, Sangeetha, additional, Lungu, Ilinca, additional, Bartlett, John M. S., additional, Krzyzanowski, Paul M., additional, Sandhu, Vandana, additional, Tiriac, Hervé, additional, Froeling, Fieke E. M., additional, Karasinska, Joanna M., additional, Topham, James T., additional, Renouf, Daniel J., additional, Schaeffer, David F., additional, Jones, Steven J. M., additional, Marra, Marco A., additional, Laskin, Janessa, additional, Chetty, Runjan, additional, Stein, Lincoln D., additional, Zogopoulos, George, additional, Haibe-Kains, Benjamin, additional, Campbell, Peter J., additional, Tuveson, David A., additional, Knox, Jennifer J., additional, Fischer, Sandra E., additional, Gallinger, Steven, additional, and Notta, Faiyaz, additional
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- 2020
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4. Spatial heterogeneity in medulloblastoma
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Morrissy, A Sorana, primary, Cavalli, Florence M G, additional, Remke, Marc, additional, Ramaswamy, Vijay, additional, Shih, David J H, additional, Holgado, Borja L, additional, Farooq, Hamza, additional, Donovan, Laura K, additional, Garzia, Livia, additional, Agnihotri, Sameer, additional, Kiehna, Erin N, additional, Mercier, Eloi, additional, Mayoh, Chelsea, additional, Papillon-Cavanagh, Simon, additional, Nikbakht, Hamid, additional, Gayden, Tenzin, additional, Torchia, Jonathon, additional, Picard, Daniel, additional, Merino, Diana M, additional, Vladoiu, Maria, additional, Luu, Betty, additional, Wu, Xiaochong, additional, Daniels, Craig, additional, Horswell, Stuart, additional, Thompson, Yuan Yao, additional, Hovestadt, Volker, additional, Northcott, Paul A, additional, Jones, David T W, additional, Peacock, John, additional, Wang, Xin, additional, Mack, Stephen C, additional, Reimand, Jüri, additional, Albrecht, Steffen, additional, Fontebasso, Adam M, additional, Thiessen, Nina, additional, Li, Yisu, additional, Schein, Jacqueline E, additional, Lee, Darlene, additional, Carlsen, Rebecca, additional, Mayo, Michael, additional, Tse, Kane, additional, Tam, Angela, additional, Dhalla, Noreen, additional, Ally, Adrian, additional, Chuah, Eric, additional, Cheng, Young, additional, Plettner, Patrick, additional, Li, Haiyan I, additional, Corbett, Richard D, additional, Wong, Tina, additional, Long, William, additional, Loukides, James, additional, Buczkowicz, Pawel, additional, Hawkins, Cynthia E, additional, Tabori, Uri, additional, Rood, Brian R, additional, Myseros, John S, additional, Packer, Roger J, additional, Korshunov, Andrey, additional, Lichter, Peter, additional, Kool, Marcel, additional, Pfister, Stefan M, additional, Schüller, Ulrich, additional, Dirks, Peter, additional, Huang, Annie, additional, Bouffet, Eric, additional, Rutka, James T, additional, Bader, Gary D, additional, Swanton, Charles, additional, Ma, Yusanne, additional, Moore, Richard A, additional, Mungall, Andrew J, additional, Majewski, Jacek, additional, Jones, Steven J M, additional, Das, Sunit, additional, Malkin, David, additional, Jabado, Nada, additional, Marra, Marco A, additional, and Taylor, Michael D, additional
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- 2017
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5. CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer
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Griffith, Malachi, primary, Spies, Nicholas C, additional, Krysiak, Kilannin, additional, McMichael, Joshua F, additional, Coffman, Adam C, additional, Danos, Arpad M, additional, Ainscough, Benjamin J, additional, Ramirez, Cody A, additional, Rieke, Damian T, additional, Kujan, Lynzey, additional, Barnell, Erica K, additional, Wagner, Alex H, additional, Skidmore, Zachary L, additional, Wollam, Amber, additional, Liu, Connor J, additional, Jones, Martin R, additional, Bilski, Rachel L, additional, Lesurf, Robert, additional, Feng, Yan-Yang, additional, Shah, Nakul M, additional, Bonakdar, Melika, additional, Trani, Lee, additional, Matlock, Matthew, additional, Ramu, Avinash, additional, Campbell, Katie M, additional, Spies, Gregory C, additional, Graubert, Aaron P, additional, Gangavarapu, Karthik, additional, Eldred, James M, additional, Larson, David E, additional, Walker, Jason R, additional, Good, Benjamin M, additional, Wu, Chunlei, additional, Su, Andrew I, additional, Dienstmann, Rodrigo, additional, Margolin, Adam A, additional, Tamborero, David, additional, Lopez-Bigas, Nuria, additional, Jones, Steven J M, additional, Bose, Ron, additional, Spencer, David H, additional, Wartman, Lukas D, additional, Wilson, Richard K, additional, Mardis, Elaine R, additional, and Griffith, Obi L, additional
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- 2017
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6. The genetic landscape of high-risk neuroblastoma
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Pugh, Trevor J, primary, Morozova, Olena, additional, Attiyeh, Edward F, additional, Asgharzadeh, Shahab, additional, Wei, Jun S, additional, Auclair, Daniel, additional, Carter, Scott L, additional, Cibulskis, Kristian, additional, Hanna, Megan, additional, Kiezun, Adam, additional, Kim, Jaegil, additional, Lawrence, Michael S, additional, Lichenstein, Lee, additional, McKenna, Aaron, additional, Pedamallu, Chandra Sekhar, additional, Ramos, Alex H, additional, Shefler, Erica, additional, Sivachenko, Andrey, additional, Sougnez, Carrie, additional, Stewart, Chip, additional, Ally, Adrian, additional, Birol, Inanc, additional, Chiu, Readman, additional, Corbett, Richard D, additional, Hirst, Martin, additional, Jackman, Shaun D, additional, Kamoh, Baljit, additional, Khodabakshi, Alireza Hadj, additional, Krzywinski, Martin, additional, Lo, Allan, additional, Moore, Richard A, additional, Mungall, Karen L, additional, Qian, Jenny, additional, Tam, Angela, additional, Thiessen, Nina, additional, Zhao, Yongjun, additional, Cole, Kristina A, additional, Diamond, Maura, additional, Diskin, Sharon J, additional, Mosse, Yael P, additional, Wood, Andrew C, additional, Ji, Lingyun, additional, Sposto, Richard, additional, Badgett, Thomas, additional, London, Wendy B, additional, Moyer, Yvonne, additional, Gastier-Foster, Julie M, additional, Smith, Malcolm A, additional, Auvil, Jaime M Guidry, additional, Gerhard, Daniela S, additional, Hogarty, Michael D, additional, Jones, Steven J M, additional, Lander, Eric S, additional, Gabriel, Stacey B, additional, Getz, Gad, additional, Seeger, Robert C, additional, Khan, Javed, additional, Marra, Marco A, additional, Meyerson, Matthew, additional, and Maris, John M, additional
- Published
- 2013
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7. Mutations in SGOL1 cause a novel cohesinopathy affecting heart and gut rhythm.
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Chetaille, Philippe, Côté, Jean-Marc, Houde, Christine, Castilloux, Julie, Zhan, Shing H, Shen, Yaoqing, Jones, Steven J M, Jomphe, Michèle, Andelfinger, Gregor, Preuss, Christoph, Piché, Jessica, Gosset, Natacha, Leclerc, Séverine, Wünnemann, Florian, Thibeault, Maryse, Gagnon, Carmen, Cameron, Michel, Burkhard, Silja, Bakkers, Jeroen, and Galli, Antonella
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COHESINS ,GENETIC mutation ,CARDIAC pacing ,GASTROINTESTINAL motility ,ARRHYTHMIA ,FIBROBLASTS - Abstract
The pacemaking activity of specialized tissues in the heart and gut results in lifelong rhythmic contractions. Here we describe a new syndrome characterized by Chronic Atrial and Intestinal Dysrhythmia, termed CAID syndrome, in 16 French Canadians and 1 Swede. We show that a single shared homozygous founder mutation in SGOL1, a component of the cohesin complex, causes CAID syndrome. Cultured dermal fibroblasts from affected individuals showed accelerated cell cycle progression, a higher rate of senescence and enhanced activation of TGF-β signaling. Karyotypes showed the typical railroad appearance of a centromeric cohesion defect. Tissues derived from affected individuals displayed pathological changes in both the enteric nervous system and smooth muscle. Morpholino-induced knockdown of sgol1 in zebrafish recapitulated the abnormalities seen in humans with CAID syndrome. Our findings identify CAID syndrome as a novel generalized dysrhythmia, suggesting a new role for SGOL1 and the cohesin complex in mediating the integrity of human cardiac and gut rhythm. [ABSTRACT FROM AUTHOR]
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- 2014
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8. The Cancer Genome Atlas Pan-Cancer analysis project.
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Chang, Kyle, Creighton, Chad J, Davis, Caleb, Donehower, Lawrence, Drummond, Jennifer, Wheeler, David, Ally, Adrian, Balasundaram, Miruna, Birol, Inanc, Butterfield, Yaron S N, Chu, Andy, Chuah, Eric, Chun, Hye-Jung E, Dhalla, Noreen, Guin, Ranabir, Hirst, Martin, Hirst, Carrie, Holt, Robert A, Jones, Steven J M, and Lee, Darlene
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CANCER research ,INFORMATION storage & retrieval systems ,CHROMOSOME abnormalities ,TUMOR genetics ,TUMORS ,BIG data ,ONCOLOGY - Abstract
The authors discuss the aspects of The Cancer Genome Atlas (TCGA) Research Network's Pan-Cancer scheme, which investigated a significant number of tumors to find molecular aberrations at the RNA, DNA, and protein levels. The project was introduced in Santa Cruz, California from October 26-27, 2013, and aims to gather coherent data sets of tumor types. The authors add that the TCGA Pan-Cancer papers provide an important contribution to cancer research.
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- 2013
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