1. Looking for New Pyrimidine Acyclic Nucleotide Analogues Designed for Phosphorylation by Human Ump-Cmp Kinase.
- Author
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Topalis, Dimitri, Kumamoto, Hiroki, Alexandre, JulieA. C., Dugué, Laurence, Pochet, Sylvie, Berteina-Raboin, Sabine, Agrofoglio, LuigiA., and Deville-Bonne, Dominique
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NUCLEOTIDES , *PHOSPHORYLATION , *PYRIMIDINES , *NUCLEIC acids , *BIOMOLECULES - Abstract
Human UMP-CMP kinase is involved in the phosphorylation of nucleic acid precursors and also in the activation of antiviral analogues including cidofovir, an acyclic phosphonate compound that mimicks dCMP and shows a broad antiviral spectrum. The binding of ligands to the enzyme was here investigated using a fluorescent probe and a competitive titration assay. At the acceptor site, the enzyme was found to accommodate any base, purine and pyrimidine, including thymidine. A method for screening analogues based on their affinity for the UMP binding site was developed. The affinities of uracil vinylphosphonate derivatives modified in the 5 position were found similar to (d)UMP and (d)CMP and improved when compared to cidofovir. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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