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Reconstructing Holocene changes in regional sea level is useful for understanding future sea-level scenarios. In this paper we examined the sedimentology, pollen, foraminifera, and organic matter properties of a well-dated profile from the Subei Basin that spans the last 6.7 ka. By integrating our findings with the archaeological record, we investigated mid- to late Holocene vegetation responses to relative sea-level fluctuations and considered the impact of climatic variations on cultural development. In the middle Holocene, the rapid and abrupt expansion of salt marsh vegetation (Chenopodiaceae, Cyperaceae, and Poaceae) suggests a relative rise in sea level. From 5.7 to 4.2 cal ka BP, lowland swamps were settled by Neolithic communities, as indicated by peak levels of microscopic charcoal and a significant rise in herbaceous pollen species, such as Cyperaceae, Typha , Myriophyllum , and Poaceae. From 4.2 to 3.7 cal ka BP, a major increase in Chenopodiaceae abundance and a δ13C excursion were observed along with a decrease in Cyperaceae and Poaceae levels, which revealed that human activity significantly decreased following the 4.2 ka climate event. Evidence suggests that the area under investigation experienced a relatively high sea level between 6.7 and 6.0 ka, a relative decrease in sea level between 6.0 and 5.7 ka, a steady sea-level condition between 5.7 and 4.2 ka, and gradual replacement by a freshwater marsh between 5.7 and 4.2 ka. The pollen and δ13 C records demonstrate that the relative sea level rose quickly from 4.2 to 3.7 ka, which could correspond to the 4.2 ka event. Enhanced El Niño-Southern Oscillation (ENSO) variance and intense climatic events in eastern China were the driving forces behind the mid-late Holocene relative sea-level shift. The rise in relative sea level eventually led to the collapse of the Qingdun and Jiangzhuang sites in the Subei Basin. Our results provide independent vegetation evidence of the simultaneous changes in relative sea level and variations in climate. • Vegatation and environment changes are investigated from ∼6700 cal a BP. • The significant relative sea-level rise in the Subei Plain during 4.2–3.7 cal ka BP. • The rise in relative sea level led to the collapse of the Qingdun site and Jiangzhuang site in the Subei Basin. [ABSTRACT FROM AUTHOR]