1. Low-Copy Genes in Terpenoid Metabolism: The Evolution and Expression of MVK and DXR Genes in Angiosperms
- Author
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Luiz Filipe Protasio Pereira, Suzana Tiemi Ivamoto-Suzuki, Paula Oliveira Camargo, Natacha Silva, Raíssa Scalzoni Rosa, Douglas Silva Domingues, Universidade Estadual Paulista (Unesp), Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA), NATACHA SILVA, UNESP, SUZANA TIEMI IVAMOTO-SUZUKI, UNESP, PAULA OLIVEIRA CAMARGO, UNESP, RAÍSSA SCALZONI ROSA, UNESP, LUIZ FILIPE PROTASIO PEREIRA, CNPCa, and DOUGLAS SILVA DOMINGUES, UNESP.
- Subjects
Coffea ,0106 biological sciences ,0301 basic medicine ,Terpenoids ,Plant Science ,Coffea arabica var. arabica ,Biology ,01 natural sciences ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,Negative selection ,Arabidopsis ,Gene expression ,Purifying selection ,Gene family ,Gene ,Ecology, Evolution, Behavior and Systematics ,MVA and MEP pathways ,chemistry.chemical_classification ,Methyl jasmonate ,Ecology ,RT-qPCR ,fungi ,Botany ,biology.organism_classification ,Molecular biology ,Terpenoid ,Angiospermae ,030104 developmental biology ,Enzyme ,Genes ,chemistry ,QK1-989 ,purifying selection ,010606 plant biology & botany - Abstract
Made available in DSpace on 2020-12-12T01:22:14Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-04-01 Terpenoids are a diverse class of metabolites that impact plant metabolism in response to environmental cues. They are synthesized either via a predominantly cytosolic (MVA) pathway or a plastidic pathway (MEP). In Arabidopsis, several enzymes from the MVA and MEP pathways are encoded by gene families, excluding MVK and DXR, which are single-copy genes. In this study, we assess the diversity, evolution and expression of DXR and MVK genes in selected angiosperms and Coffea arabica in particular. Evolutionary analysis revealed that DXR and MVK underwent purifying selection, but the selection effect for DXR was stronger than it was for MVK. Digital gene expression (DGE) profile analysis of six species revealed that expression levels of MVK in flowers and roots were high, whereas for DXR peak values were observed in leaves. In C. arabica, both genes were highly expressed in flowers, and CaDXR was upregulated in response to methyl jasmonate. C. arabica DGE data were validated by assessing gene expression in selected organs, and by plants treated with hexanoic acid (Hx) using RT-qPCR. MVK expression was upregulated in roots treated with Hx. CaDXR was downregulated in leaves by Hx treatment in a genotype-specific manner, indicating a differential response to priming. Departamento de Biodiversidade Instituto de Biociências Universidade Estadual Paulista UNESP Laboratório de Biotecnologia Vegetal Empresa Brasileira de Pesquisa Agropecuária (Embrapa-Café) Departamento de Biodiversidade Instituto de Biociências Universidade Estadual Paulista UNESP
- Published
- 2020
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