17 results on '"Darryl A. Knight"'
Search Results
2. Regulation of xanthine dehydrogensase gene expression and uric acid production in human airway epithelial cells
- Author
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Bernadette Jones, Peter A. B. Wark, Jeremy A. Hirota, Kristy Nichol, Alan Hsu, Ryan D. Huff, Philip M. Hansbro, and Darryl A. Knight
- Subjects
0301 basic medicine ,Male ,Pathology ,Pulmonology ,Xanthine Dehydrogenase ,medicine.medical_treatment ,Gene Expression ,lcsh:Medicine ,Epithelium ,chemistry.chemical_compound ,Mice ,Pulmonary Disease, Chronic Obstructive ,Habits ,Animal Cells ,Smoke ,Medicine and Health Sciences ,Smoking Habits ,Public and Occupational Health ,lcsh:Science ,Cells, Cultured ,Mice, Inbred BALB C ,Multidisciplinary ,Pyroglyphidae ,Smoking ,Tobacco Products ,Animal Models ,Middle Aged ,Chemistry ,Cytokine ,medicine.anatomical_structure ,Experimental Organism Systems ,Physical Sciences ,Female ,Cellular Types ,Anatomy ,medicine.drug ,Research Article ,Adult ,medicine.medical_specialty ,General Science & Technology ,Substance-Related Disorders ,Chronic Obstructive Pulmonary Disease ,Allopurinol ,Bronchi ,Mouse Models ,Biology ,Research and Analysis Methods ,Gene Expression Regulation, Enzymologic ,03 medical and health sciences ,Interferon-gamma ,Model Organisms ,Internal medicine ,Mental Health and Psychiatry ,medicine ,Genetics ,Animals ,Humans ,Aged ,Behavior ,Tumor Necrosis Factor-alpha ,Gene Expression Profiling ,lcsh:R ,Chemical Compounds ,Damage-associated molecular pattern ,Biology and Life Sciences ,Smoking Related Disorders ,Epithelial Cells ,Cell Biology ,Allergens ,Xanthine ,Asthma ,Uric Acid ,respiratory tract diseases ,Disease Models, Animal ,030104 developmental biology ,Endocrinology ,Biological Tissue ,chemistry ,Xanthine dehydrogenase ,Uric acid ,Respiratory epithelium ,lcsh:Q ,Acids ,Respiratory tract - Abstract
© 2017 Huff et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Introduction: The airway epithelium is a physical and immunological barrier that protects the pulmonary system from inhaled environmental insults. Uric acid has been detected in the respiratory tract and can function as an antioxidant or damage associated molecular pattern. We have demonstrated that human airway epithelial cells are a source of uric acid. Our hypothesis is that uric acid production by airway epithelial cells is induced by environmental stimuli associated with chronic respiratory diseases. We therefore examined how airway epithelial cells regulate uric acid production. Materials and methods: Allergen and cigarette smoke mouse models were performed using house dust mite (HDM) and cigarette smoke exposure, respectively, with outcome measurements of lung uric acid levels. Primary human airway epithelial cells isolated from clinically diagnosed patients with asthma and chronic obstructive pulmonary disease (COPD) were grown in submerged cultures and compared to age-matched healthy controls for uric acid release. HBEC-6KT cells, a human airway epithelial cell line, were grown under submerged monolayer conditions for mechanistic and gene expression studies. Results: HDM, but not cigarette smoke exposure, stimulated uric acid production in vivo and in vitro. Primary human airway epithelial cells from asthma, but not COPD patients, displayed elevated levels of extracellular uric acid in culture. In HBEC-6KT, production of uric acid was sensitive to the xanthine dehydrogenase (XDH) inhibitor, allopurinol, and the ATP Binding Cassette C4 (ABCC4) inhibitor, MK-571. Lastly, the pro-inflammatory cytokine combination of TNF-α and IFN-γ elevated extracellular uric acid levels and XDH gene expression in HBEC-6KT cells. Conclusions: Our results suggest that the active production of uric acid from human airway epithelial cells may be intrinsically altered in asthma and be further induced by pro-inflammatory cytokines.
- Published
- 2017
3. Versican V1 Overexpression Induces a Myofibroblast-Like Phenotype in Cultured Fibroblasts
- Author
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Seti Boroomand, Bruce M. McManus, Zongshu Luo, Thomas Abraham, Anna Meredith, Jon M. Carthy, and Darryl A. Knight
- Subjects
Cellular differentiation ,Integrin ,lcsh:Medicine ,Smad2 Protein ,Cell Line ,Extracellular matrix ,Mice ,Versicans ,Transforming Growth Factor beta ,medicine ,Animals ,Humans ,Transgenes ,Phosphorylation ,Myofibroblasts ,Fibroblast ,lcsh:Science ,Multidisciplinary ,biology ,Integrin beta1 ,lcsh:R ,Cell Differentiation ,Fibroblasts ,Cadherins ,Molecular biology ,Actins ,Cell biology ,carbohydrates (lipids) ,Collagen Type III ,Phenotype ,medicine.anatomical_structure ,Gene Expression Regulation ,Proteoglycan ,Focal Adhesion Kinase 1 ,biology.protein ,Versican ,lcsh:Q ,Myofibroblast ,Research Article ,Signal Transduction ,Transforming growth factor - Abstract
Background Versican, a chondroitin sulphate proteoglycan, is one of the key components of the provisional extracellular matrix expressed after injury. The current study evaluated the hypothesis that a versican-rich matrix alters the phenotype of cultured fibroblasts. Methods and Results The full-length cDNA for the V1 isoform of human versican was cloned and the recombinant proteoglycan was expressed in murine fibroblasts. Versican expression induced a marked change in fibroblast phenotype. Functionally, the versican-expressing fibroblasts proliferated faster and displayed enhanced cell adhesion, but migrated slower than control cells. These changes in cell function were associated with greater N-cadherin and integrin β1 expression, along with increased FAK phosphorylation. The versican-expressing fibroblasts also displayed expression of smooth muscle α-actin, a marker of myofibroblast differentiation. Consistent with this observation, the versican fibroblasts displayed increased synthetic activity, as measured by collagen III mRNA expression, as well as a greater capacity to contract a collagen lattice. These changes appear to be mediated, at least in part, by an increase in active TGF-β signaling in the versican expressing fibroblasts, and this was measured by phosphorylation and nuclear accumulation of SMAD2. Conclusions Collectively, these data indicate versican expression induces a myofibroblast-like phenotype in cultured fibroblasts.
- Published
- 2015
4. Granzyme B Cleaves Decorin, Biglycan and Soluble Betaglycan, Releasing Active Transforming Growth Factor-β1
- Author
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Wendy A. Boivin, Marlo Shackleford, Amanda Vanden Hoek, Hongyan Zhao, Tillie L. Hackett, Darryl A. Knight, and David J. Granville
- Subjects
Multidisciplinary ,Science ,lcsh:R ,lcsh:Medicine ,Medicine ,Correction ,lcsh:Q ,lcsh:Science - Published
- 2012
5. Granzyme B cleaves decorin, biglycan and soluble betaglycan, releasing active transforming growth factor-β1
- Author
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Marlo Shackleford, Amanda L. Vanden Hoek, Darryl A. Knight, Tillie L. Hackett, Hongyan Zhao, Wendy A. Boivin, and David J. Granville
- Subjects
Anatomy and Physiology ,Decorin ,lcsh:Medicine ,Cardiovascular ,Biochemistry ,Granzymes ,Muscle, Smooth, Vascular ,Substrate Specificity ,Extracellular matrix ,0302 clinical medicine ,Coumarins ,Molecular Cell Biology ,Biglycan ,Phosphorylation ,lcsh:Science ,Cells, Cultured ,0303 health sciences ,Multidisciplinary ,biology ,Cell biology ,Enzymes ,Extracellular Matrix ,Isocoumarins ,030220 oncology & carcinogenesis ,Cytochemistry ,Medicine ,Proteoglycans ,hormones, hormone substitutes, and hormone antagonists ,Research Article ,Proteases ,Serine Proteinase Inhibitors ,Blotting, Western ,Transforming Growth Factor beta1 ,03 medical and health sciences ,Extracellular ,Humans ,Smad3 Protein ,Biology ,030304 developmental biology ,lcsh:R ,Proteins ,Granzyme B ,Kinetics ,Proteoglycan ,Granzyme ,Solubility ,Immunology ,biology.protein ,Biocatalysis ,lcsh:Q ,Extracellular Space ,Receptors, Transforming Growth Factor beta - Abstract
Objective Granzyme B (GrB) is a pro-apoptotic serine protease that contributes to immune-mediated target cell apoptosis. However, during inflammation, GrB accumulates in the extracellular space, retains its activity, and is capable of cleaving extracellular matrix (ECM) proteins. Recent studies have implicated a pathogenic extracellular role for GrB in cardiovascular disease, yet the pathophysiological consequences of extracellular GrB activity remain largely unknown. The objective of this study was to identify proteoglycan (PG) substrates of GrB and examine the ability of GrB to release PG-sequestered TGF-β1 into the extracellular milieu. Methods/Results Three extracellular GrB PG substrates were identified; decorin, biglycan and betaglycan. As all of these PGs sequester active TGF-β1, cytokine release assays were conducted to establish if GrB-mediated PG cleavage induced TGF-β1 release. Our data confirmed that GrB liberated TGF-β1 from all three substrates as well as from endogenous ECM and this process was inhibited by the GrB inhibitor 3,4-dichloroisocoumarin. The released TGF-β1 retained its activity as indicated by the induction of SMAD-3 phosphorylation in human coronary artery smooth muscle cells. Conclusion In addition to contributing to ECM degradation and the loss of tissue structural integrity in vivo, increased extracellular GrB activity is also capable of inducing the release of active TGF-β1 from PGs.
- Published
- 2012
6. Regional differences in susceptibiity of bronchial epithelium to mesenchymal transition and inhibition by the macrolide antibiotic azithromycin
- Author
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Suzanna Lindsey-Temple, B. Banerjee, Erika N. Sutanto, Daniel C. Chambers, Stephen M. Stick, Anthony Kicic, Michael Musk, Stephanie T. Yerkovich, Peter Hopkins, and Darryl A. Knight
- Subjects
Adult ,Male ,Epithelial-Mesenchymal Transition ,Pulmonology ,medicine.medical_treatment ,Science ,Immunology ,Bronchiolitis obliterans ,Gene Expression ,Bronchi ,Biology ,Azithromycin ,Mycophenolate ,Molecular Genetics ,Transforming Growth Factor beta1 ,Fibrosis ,Molecular Cell Biology ,medicine ,Genetics ,Lung transplantation ,Humans ,Epithelial–mesenchymal transition ,Smad3 Protein ,Cells, Cultured ,Aged ,Transplantation ,Multidisciplinary ,Mesenchymal stem cell ,Computational Biology ,Epithelial Cells ,Immunologic Subspecialties ,Middle Aged ,medicine.disease ,Epithelium ,Anti-Bacterial Agents ,medicine.anatomical_structure ,Medicine ,Clinical Immunology ,Female ,Cellular Types ,Receptors, Transforming Growth Factor beta ,medicine.drug ,Research Article ,Lung Transplantation - Abstract
ObjectiveDysregulated repair following epithelial injury is a key forerunner of disease in many organs, and the acquisition of a mesenchymal phenotype by the injured epithelial cells (epithelial to mesenchymal transition, EMT) may serve as a source of fibrosis. The macrolide antibiotic azithromycin and the DNA synthesis inhibitor mycophenolate are in clinical use but their mechanism of action remains unknown in post-transplant bronchiolitis obliterans syndrome (BOS). Here we determined if regional variation in the EMT response to TGFβ1 underlies the bronchiolocentric fibrosis leading to BOS and whether EMT could be inhibited by azithromycin or mycophenolate.Methods/resultsWe found that small and large airway epithelial cells from stable lung transplant patients underwent EMT when stimulated with TGFβ1, however mesenchymal protein expression was higher and loss of epithelial protein expression more complete in small airway epithelial cells. This regional difference was not mediated by changes in expression of the TGFβRII or Smad3 activation. Azithromycin potentially inhibited EMT in both small and large airway epithelial cells by inhibiting Smad3 expression, but not activation.ConclusionCollectively, these observations provide a biologic basis for a previously unexplained but widely observed clinical phenomena, and a platform for the development of new approaches to fibrotic diseases.
- Published
- 2012
7. Granzyme K activates protease-activated receptor-1
- Author
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Dmitri V. Pechkovsky, Darryl A. Knight, Tillie L. Hackett, David J. Granville, and Dawn Cooper
- Subjects
Pulmonology ,medicine.medical_treatment ,lcsh:Medicine ,Signal transduction ,ERK signaling cascade ,p38 Mitogen-Activated Protein Kinases ,Biochemistry ,Granzymes ,0302 clinical medicine ,Molecular cell biology ,Membrane Receptor Signaling ,Phosphorylation ,lcsh:Science ,Lung ,Chemokine CCL2 ,Mitogen-Activated Protein Kinase 1 ,0303 health sciences ,Multidisciplinary ,Mitogen-Activated Protein Kinase 3 ,biology ,Thrombin ,Signaling cascades ,Innate Immunity ,Cell biology ,medicine.anatomical_structure ,Cytokine ,030220 oncology & carcinogenesis ,Medicine ,Immunologic Receptor Signaling ,medicine.drug ,Research Article ,MAPK signaling cascades ,Immunology ,Cell Line ,03 medical and health sciences ,medicine ,Extracellular ,Humans ,Receptor, PAR-1 ,Interleukin 6 ,Fibroblast ,Biology ,030304 developmental biology ,Cell Proliferation ,Inflammation ,Interleukin-6 ,Interleukin-8 ,lcsh:R ,Immunity ,Fibroblasts ,Granzyme ,Respiratory Infections ,biology.protein ,Granzyme K ,Cytokine secretion ,lcsh:Q ,Extracellular Space - Abstract
Granzyme K (GrK) is a trypsin-like serine protease that is elevated in patients with sepsis and acute lung inflammation. While GrK was originally believed to function exclusively as a pro-apoptotic protease, recent studies now suggest that GrK may possess other non-cytotoxic functions. In the context of acute lung inflammation, we hypothesized that GrK induces pro-inflammatory cytokine release through the activation of protease-activated receptors. The direct effect of extracellular GrK on PAR activation, intracellular signaling and cytokine was assessed using cultured human lung fibroblasts. Extracellular GrK induced secretion of IL-6, IL-8 and MCP-1 in a dose- and time-dependent manner in lung fibroblasts. Heat-inactivated GrK did not induce cytokine release indicating that protease activity is required. Furthermore, GrK induced activation of both the ERK1/2 and p38 MAP kinase signaling pathways, and significantly increased fibroblast proliferation. Inhibition of ERK1/2 abrogated the GrK-mediated cytokine release. Through the use of PAR-1 and PAR-2 neutralizing antibodies, it was determined that PAR-1 is essential for GrK-induced IL-6, IL-8 and MCP-1 release. In summary, extracellular GrK is capable of activating PAR-1 and inducing fibroblast cytokine secretion and proliferation.
- Published
- 2011
8. A micro RNA processing defect in rapidly progressing idiopathic pulmonary fibrosis
- Author
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Sameer R. Oak, Matthew A. Sleeman, Cory M. Hogaboam, Lynne Murray, Galen B. Toews, Amrita Joshi, Athula Herath, Darryl A. Knight, Ana Lucia Coelho, Fernando J. Martinez, Kevin R. Flaherty, and I.K. Anderson
- Subjects
Male ,Ribonuclease III ,Pathology ,medicine.medical_specialty ,Epithelial-Mesenchymal Transition ,lcsh:Medicine ,Biology ,Polymerase Chain Reaction ,DEAD-box RNA Helicases ,Idiopathic pulmonary fibrosis ,Young Adult ,Mirna expression ,Fibrosis ,Pulmonary fibrosis ,microRNA ,Biopsy ,medicine ,Humans ,Epithelial–mesenchymal transition ,RNA, Messenger ,Eukaryotic Initiation Factors ,lcsh:Science ,Lung ,Aged ,Retrospective Studies ,Multidisciplinary ,medicine.diagnostic_test ,lcsh:R ,respiratory system ,Middle Aged ,medicine.disease ,Idiopathic Pulmonary Fibrosis ,respiratory tract diseases ,MicroRNAs ,medicine.anatomical_structure ,Argonaute Proteins ,Disease Progression ,lcsh:Q ,Female - Abstract
BACKGROUND:Idiopathic pulmonary fibrosis exhibits differential progression from the time of diagnosis but the molecular basis for varying progression rates is poorly understood. The aim of the present study was to ascertain whether differential miRNA expression might provide one explanation for rapidly versus slowly progressing forms of IPF. METHODOLOGY AND PRINCIPAL FINDINGS:miRNA and mRNA were isolated from surgical lung biopsies from IPF patients with a clinically documented rapid or slow course of disease over the first year after diagnosis. A quantitative PCR miRNA array containing 88 of the most abundant miRNA in the human genome was used to profile lung biopsies from 9 patients with rapidly progressing IPF, 6 patients with slowly progressing IPF, and 10 normal lung biopsies. Using this approach, 11 miRNA were significantly increased and 36 were significantly decreased in rapid biopsies compared with normal biopsies. Slowly progressive biopsies exhibited 4 significantly increased miRNA and 36 significantly decreased miRNA compared with normal lung. Among the miRNA present in IPF with validated mRNA targets were those with regulatory effects on epithelial-mesenchymal transition (EMT). Five miRNA (miR-302c, miR-423-5p, miR-210, miR-376c, and miR-185) were significantly increased in rapid compared with slow IPF lung biopsies. Additional analyses of rapid biopsies and fibroblasts grown from the same biopsies revealed that the expression of AGO1 and AGO2 (essential components of the miRNA processing RISC complex) were lower compared with either slow or normal lung biopsies and fibroblasts. CONCLUSION:These findings suggest that the development and/or clinical progression of IPF might be the consequence of aberrant miRNA processing.
- Published
- 2010
9. BMP-7 does not protect against bleomycin-induced lung or skin fibrosis
- Author
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Francis Farrell, Stephanie M. Warner, Rochelle L. Argentieri, Paul L. Dudas, Furquan Shaheen, Lynne Murray, Darryl A. Knight, and Tillie L. Hackett
- Subjects
Pathology ,Bone Morphogenetic Protein 7 ,SMAD ,Smad2 Protein ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Respiratory Medicine/Interstitial Lung Diseases ,Fibrosis ,Lung ,Skin ,0303 health sciences ,Multidisciplinary ,Chemistry ,respiratory system ,3. Good health ,Bone morphogenetic protein 7 ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,embryonic structures ,Medicine ,Female ,Research Article ,medicine.medical_specialty ,animal structures ,Science ,Bone morphogenetic protein ,Bleomycin ,03 medical and health sciences ,Rheumatology ,In vivo ,medicine ,Renal fibrosis ,Animals ,Humans ,Smad3 Protein ,030304 developmental biology ,Pharmacology ,Epithelial Cells ,Fibroblasts ,medicine.disease ,respiratory tract diseases ,Mice, Inbred C57BL ,Disease Models, Animal ,Gene Expression Regulation ,Cancer research - Abstract
Bone morphogenic protein (BMP)-7 is a member of the BMP family which are structurally and functionally related, and part of the TGFbeta super family of growth factors. BMP-7 has been reported to inhibit renal fibrosis and TGFbeta1-induced epithelial-mesenchymal transition (EMT), in part through negative interactions with TGFbeta1 induced Smad 2/3 activation. We utilized in vivo bleomycin-induced fibrosis models in the skin and lung to determine the potential therapeutic effect of BMP-7. We then determined the effect of BMP-7 on TGFbeta1-induced EMT in lung epithelial cells and collagen production by human lung fibroblasts. We show that BMP-7 did not affect bleomycin-induced fibrosis in either the lung or skin in vivo; had no effect on expression of pro-fibrotic genes by human lung fibroblasts, either at rest or following exposure to TGFbeta1; and did not modulate TGFbeta1-induced EMT in human lung epithelial cells. Taken together our data indicates that BMP-7 has no anti-fibrotic effect in lung or skin fibrosis either in vivo or in vitro. This suggests that the therapeutic options for BMP-7 may be confined to the renal compartment.
- Published
- 2008
10. DNA Methylation Profiles of Airway Epithelial Cells and PBMCs from Healthy, Atopic and Asthmatic Children
- Author
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Anthony Kicic, Farshid S. Garmaroudi, Sarah M. Neumann, Oliver P. Günther, Erika N. Sutanto, Darryl A. Knight, Michael S. Kobor, Kak-Ming Ling, Stephen M. Stick, Peter D. Paré, Dorota Stefanowicz, and Tillie-Louise Hackett
- Subjects
Hypersensitivity, Immediate ,Male ,Pulmonology ,Epidemiology ,lcsh:Medicine ,Cohort Studies ,Atopy ,Molecular cell biology ,0302 clinical medicine ,Gene expression ,STAT5 Transcription Factor ,Pathology ,Child ,lcsh:Science ,skin and connective tissue diseases ,Regulation of gene expression ,0303 health sciences ,Multidisciplinary ,LIM Domain Proteins ,3. Good health ,Phenotype ,CpG site ,Health ,Child, Preschool ,DNA methylation ,Medicine ,Female ,Epigenetics ,Cellular Types ,DNA modification ,Research Article ,Adolescent ,Bronchi ,Biology ,Allergic inflammation ,03 medical and health sciences ,Diagnostic Medicine ,Genetics ,medicine ,Humans ,Demography ,030304 developmental biology ,Asthma ,Tumor Suppressor Proteins ,lcsh:R ,fungi ,Epithelial Cells ,DNA Methylation ,medicine.disease ,body regions ,Biomarker Epidemiology ,Gene Expression Regulation ,030228 respiratory system ,Case-Control Studies ,Immunology ,Leukocytes, Mononuclear ,CpG Islands ,lcsh:Q ,Carrier Proteins ,Biomarkers ,General Pathology - Abstract
Background Allergic inflammation is commonly observed in a number of conditions that are associated with atopy including asthma, eczema and rhinitis. However, the genetic, environmental or epigenetic factors involved in these conditions are likely to be different. Epigenetic modifications, such as DNA methylation, can be influenced by the environment and result in changes to gene expression. Objectives To characterize the DNA methylation pattern of airway epithelial cells (AECs) compared to peripheral blood mononuclear cells (PBMCs) and to discern differences in methylation within each cell type amongst healthy, atopic and asthmatic subjects. Methods PBMCs and AECs from bronchial brushings were obtained from children undergoing elective surgery for non-respiratory conditions. The children were categorized as atopic, atopic asthmatic, non-atopic asthmatic or healthy controls. Extracted DNA was bisulfite treated and 1505 CpG loci across 807 genes were analyzed using the Illumina GoldenGate Methylation Cancer Panel I. Gene expression for a subset of genes was performed using RT-PCR. Results We demonstrate a signature set of CpG sites that are differentially methylated in AECs as compared to PBMCs regardless of disease phenotype. Of these, 13 CpG sites were specific to healthy controls, 8 sites were only found in atopics, and 6 CpGs were unique to asthmatics. We found no differences in the methylation status of PBMCs between disease phenotypes. In AECs derived from asthmatics compared to atopics, 8 differentially methylated sites were identified including CpGs in STAT5A and CRIP1. We demonstrate STAT5A gene expression is decreased whereas CRIP1 gene expression is elevated in the AECs from asthmatic compared to both healthy and atopic subjects. Discussion We characterized a cell specific DNA methylation signature for AECs compared to PBMCs regardless of asthmatic or atopic status. Our data highlight the importance of understanding DNA methylation in the epithelium when studying the epithelial contribution to asthma.
- Published
- 2012
11. Dual Organism Transcriptomics of Airway Epithelial Cells Interacting with Conidia of Aspergillus fumigatus
- Author
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Jian Ruan, Pol Gomez, Jean L. Oosthuizen, Scott J. Tebbutt, Darryl A. Knight, Tillie L. Hackett, and Margo M. Moore
- Subjects
Spores ,Pulmonology ,lcsh:Medicine ,Transcriptomes ,Aspergillus fumigatus ,Transcriptome ,Molecular Cell Biology ,lcsh:Science ,skin and connective tissue diseases ,Immune Response ,Cells, Cultured ,0303 health sciences ,Microscopy, Confocal ,Multidisciplinary ,biology ,Reverse Transcriptase Polymerase Chain Reaction ,Fungal genetics ,Genomics ,Spores, Fungal ,respiratory system ,Innate Immunity ,3. Good health ,Host-Pathogen Interaction ,Vacuolar acidification ,Medical Microbiology ,Medicine ,Cellular Types ,Research Article ,Immunology ,Mycology ,Microbiology ,Cell Line ,03 medical and health sciences ,Immune system ,Genome Analysis Tools ,Humans ,Biology ,Microbial Pathogens ,030304 developmental biology ,Innate immune system ,Interleukin-6 ,030306 microbiology ,Gene Expression Profiling ,lcsh:R ,Immunity ,Fungi ,Epithelial Cells ,biology.organism_classification ,Gene expression profiling ,Cell culture ,Respiratory Infections ,lcsh:Q ,Metagenomics ,Genome Expression Analysis - Abstract
Background Given the complex nature of the responses that can occur in host-pathogen interactions, dual transcriptomics offers a powerful method of elucidating these interactions during infection. The gene expression patterns of Aspergillus fumigatus conidia or host cells have been reported in a number of previous studies, but each focused on only one of the interacting organisms. In the present study, we profiled simultaneously the transcriptional response of both A. fumigatus and human airway epithelial cells (AECs). Methodology 16HBE14o- transformed bronchial epithelial cells were incubated with A. fumigatus conidia at 37°C for 6 hours, followed by genome-wide transcriptome analysis using human and fungal microarrays. Differentially expressed gene lists were generated from the microarrays, from which biologically relevant themes were identified. Human and fungal candidate genes were selected for validation, using RT-qPCR, in both 16HBE14o- cells and primary AECs co-cultured with conidia. Principal Findings We report that ontologies related to the innate immune response are activated by co-incubation with A. fumigatus condia, and interleukin-6 (IL-6) was confirmed to be up-regulated in primary AECs via RT-qPCR. Concomitantly, A. fumigatus was found to up-regulate fungal pathways involved in iron acquisition, vacuolar acidification, and formate dehydrogenase activity. Conclusion To our knowledge, this is the first study to apply a dual organism transcriptomics approach to interactions of A. fumigatus conidia and human airway epithelial cells. The up-regulation of IL-6 by epithelia and simultaneous activation of several pathways by fungal conidia warrants further investigation as we seek to better understand this interaction in both health and disease. The cellular response of the airway epithelium to A. fumigatus is important to understand if we are to improve host-pathogen outcomes.
- Published
- 2011
12. Regulation of xanthine dehydrogensase gene expression and uric acid production in human airway epithelial cells.
- Author
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Ryan D Huff, Alan C-Y Hsu, Kristy S Nichol, Bernadette Jones, Darryl A Knight, Peter A B Wark, Philip M Hansbro, and Jeremy A Hirota
- Subjects
Medicine ,Science - Abstract
The airway epithelium is a physical and immunological barrier that protects the pulmonary system from inhaled environmental insults. Uric acid has been detected in the respiratory tract and can function as an antioxidant or damage associated molecular pattern. We have demonstrated that human airway epithelial cells are a source of uric acid. Our hypothesis is that uric acid production by airway epithelial cells is induced by environmental stimuli associated with chronic respiratory diseases. We therefore examined how airway epithelial cells regulate uric acid production.Allergen and cigarette smoke mouse models were performed using house dust mite (HDM) and cigarette smoke exposure, respectively, with outcome measurements of lung uric acid levels. Primary human airway epithelial cells isolated from clinically diagnosed patients with asthma and chronic obstructive pulmonary disease (COPD) were grown in submerged cultures and compared to age-matched healthy controls for uric acid release. HBEC-6KT cells, a human airway epithelial cell line, were grown under submerged monolayer conditions for mechanistic and gene expression studies.HDM, but not cigarette smoke exposure, stimulated uric acid production in vivo and in vitro. Primary human airway epithelial cells from asthma, but not COPD patients, displayed elevated levels of extracellular uric acid in culture. In HBEC-6KT, production of uric acid was sensitive to the xanthine dehydrogenase (XDH) inhibitor, allopurinol, and the ATP Binding Cassette C4 (ABCC4) inhibitor, MK-571. Lastly, the pro-inflammatory cytokine combination of TNF-α and IFN-γ elevated extracellular uric acid levels and XDH gene expression in HBEC-6KT cells.Our results suggest that the active production of uric acid from human airway epithelial cells may be intrinsically altered in asthma and be further induced by pro-inflammatory cytokines.
- Published
- 2017
- Full Text
- View/download PDF
13. Regional differences in susceptibiity of bronchial epithelium to mesenchymal transition and inhibition by the macrolide antibiotic azithromycin.
- Author
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Balarka Banerjee, Michael Musk, Erika N Sutanto, Stephanie T Yerkovich, Peter Hopkins, Darryl A Knight, Suzanna Lindsey-Temple, Stephen M Stick, Anthony Kicic, and Daniel C Chambers
- Subjects
Medicine ,Science - Abstract
ObjectiveDysregulated repair following epithelial injury is a key forerunner of disease in many organs, and the acquisition of a mesenchymal phenotype by the injured epithelial cells (epithelial to mesenchymal transition, EMT) may serve as a source of fibrosis. The macrolide antibiotic azithromycin and the DNA synthesis inhibitor mycophenolate are in clinical use but their mechanism of action remains unknown in post-transplant bronchiolitis obliterans syndrome (BOS). Here we determined if regional variation in the EMT response to TGFβ1 underlies the bronchiolocentric fibrosis leading to BOS and whether EMT could be inhibited by azithromycin or mycophenolate.Methods/resultsWe found that small and large airway epithelial cells from stable lung transplant patients underwent EMT when stimulated with TGFβ1, however mesenchymal protein expression was higher and loss of epithelial protein expression more complete in small airway epithelial cells. This regional difference was not mediated by changes in expression of the TGFβRII or Smad3 activation. Azithromycin potentially inhibited EMT in both small and large airway epithelial cells by inhibiting Smad3 expression, but not activation.ConclusionCollectively, these observations provide a biologic basis for a previously unexplained but widely observed clinical phenomena, and a platform for the development of new approaches to fibrotic diseases.
- Published
- 2012
- Full Text
- View/download PDF
14. DNA methylation profiles of airway epithelial cells and PBMCs from healthy, atopic and asthmatic children.
- Author
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Dorota Stefanowicz, Tillie-Louise Hackett, Farshid S Garmaroudi, Oliver P Günther, Sarah Neumann, Erika N Sutanto, Kak-Ming Ling, Michael S Kobor, Anthony Kicic, Stephen M Stick, Peter D Paré, and Darryl A Knight
- Subjects
Medicine ,Science - Abstract
Allergic inflammation is commonly observed in a number of conditions that are associated with atopy including asthma, eczema and rhinitis. However, the genetic, environmental or epigenetic factors involved in these conditions are likely to be different. Epigenetic modifications, such as DNA methylation, can be influenced by the environment and result in changes to gene expression.To characterize the DNA methylation pattern of airway epithelial cells (AECs) compared to peripheral blood mononuclear cells (PBMCs) and to discern differences in methylation within each cell type amongst healthy, atopic and asthmatic subjects.PBMCs and AECs from bronchial brushings were obtained from children undergoing elective surgery for non-respiratory conditions. The children were categorized as atopic, atopic asthmatic, non-atopic asthmatic or healthy controls. Extracted DNA was bisulfite treated and 1505 CpG loci across 807 genes were analyzed using the Illumina GoldenGate Methylation Cancer Panel I. Gene expression for a subset of genes was performed using RT-PCR.We demonstrate a signature set of CpG sites that are differentially methylated in AECs as compared to PBMCs regardless of disease phenotype. Of these, 13 CpG sites were specific to healthy controls, 8 sites were only found in atopics, and 6 CpGs were unique to asthmatics. We found no differences in the methylation status of PBMCs between disease phenotypes. In AECs derived from asthmatics compared to atopics, 8 differentially methylated sites were identified including CpGs in STAT5A and CRIP1. We demonstrate STAT5A gene expression is decreased whereas CRIP1 gene expression is elevated in the AECs from asthmatic compared to both healthy and atopic subjects.We characterized a cell specific DNA methylation signature for AECs compared to PBMCs regardless of asthmatic or atopic status. Our data highlight the importance of understanding DNA methylation in the epithelium when studying the epithelial contribution to asthma.
- Published
- 2012
- Full Text
- View/download PDF
15. Dual organism transcriptomics of airway epithelial cells interacting with conidia of Aspergillus fumigatus.
- Author
-
Jean L Oosthuizen, Pol Gomez, Jian Ruan, Tillie L Hackett, Margo M Moore, Darryl A Knight, and Scott J Tebbutt
- Subjects
Medicine ,Science - Abstract
Given the complex nature of the responses that can occur in host-pathogen interactions, dual transcriptomics offers a powerful method of elucidating these interactions during infection. The gene expression patterns of Aspergillus fumigatus conidia or host cells have been reported in a number of previous studies, but each focused on only one of the interacting organisms. In the present study, we profiled simultaneously the transcriptional response of both A. fumigatus and human airway epithelial cells (AECs).16HBE14o- transformed bronchial epithelial cells were incubated with A. fumigatus conidia at 37°C for 6 hours, followed by genome-wide transcriptome analysis using human and fungal microarrays. Differentially expressed gene lists were generated from the microarrays, from which biologically relevant themes were identified. Human and fungal candidate genes were selected for validation, using RT-qPCR, in both 16HBE14o- cells and primary AECs co-cultured with conidia.We report that ontologies related to the innate immune response are activated by co-incubation with A. fumigatus condia, and interleukin-6 (IL-6) was confirmed to be up-regulated in primary AECs via RT-qPCR. Concomitantly, A. fumigatus was found to up-regulate fungal pathways involved in iron acquisition, vacuolar acidification, and formate dehydrogenase activity.To our knowledge, this is the first study to apply a dual organism transcriptomics approach to interactions of A. fumigatus conidia and human airway epithelial cells. The up-regulation of IL-6 by epithelia and simultaneous activation of several pathways by fungal conidia warrants further investigation as we seek to better understand this interaction in both health and disease. The cellular response of the airway epithelium to A. fumigatus is important to understand if we are to improve host-pathogen outcomes.
- Published
- 2011
- Full Text
- View/download PDF
16. Granzyme K activates protease-activated receptor-1.
- Author
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Dawn M Cooper, Dmitri V Pechkovsky, Tillie L Hackett, Darryl A Knight, and David J Granville
- Subjects
Medicine ,Science - Abstract
Granzyme K (GrK) is a trypsin-like serine protease that is elevated in patients with sepsis and acute lung inflammation. While GrK was originally believed to function exclusively as a pro-apoptotic protease, recent studies now suggest that GrK may possess other non-cytotoxic functions. In the context of acute lung inflammation, we hypothesized that GrK induces pro-inflammatory cytokine release through the activation of protease-activated receptors. The direct effect of extracellular GrK on PAR activation, intracellular signaling and cytokine was assessed using cultured human lung fibroblasts. Extracellular GrK induced secretion of IL-6, IL-8 and MCP-1 in a dose- and time-dependent manner in lung fibroblasts. Heat-inactivated GrK did not induce cytokine release indicating that protease activity is required. Furthermore, GrK induced activation of both the ERK1/2 and p38 MAP kinase signaling pathways, and significantly increased fibroblast proliferation. Inhibition of ERK1/2 abrogated the GrK-mediated cytokine release. Through the use of PAR-1 and PAR-2 neutralizing antibodies, it was determined that PAR-1 is essential for GrK-induced IL-6, IL-8 and MCP-1 release. In summary, extracellular GrK is capable of activating PAR-1 and inducing fibroblast cytokine secretion and proliferation.
- Published
- 2011
- Full Text
- View/download PDF
17. BMP-7 does not protect against bleomycin-induced lung or skin fibrosis.
- Author
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Lynne A Murray, Tillie L Hackett, Stephanie M Warner, Furquan Shaheen, Rochelle L Argentieri, Paul Dudas, Francis X Farrell, and Darryl A Knight
- Subjects
Medicine ,Science - Abstract
Bone morphogenic protein (BMP)-7 is a member of the BMP family which are structurally and functionally related, and part of the TGFbeta super family of growth factors. BMP-7 has been reported to inhibit renal fibrosis and TGFbeta1-induced epithelial-mesenchymal transition (EMT), in part through negative interactions with TGFbeta1 induced Smad 2/3 activation. We utilized in vivo bleomycin-induced fibrosis models in the skin and lung to determine the potential therapeutic effect of BMP-7. We then determined the effect of BMP-7 on TGFbeta1-induced EMT in lung epithelial cells and collagen production by human lung fibroblasts. We show that BMP-7 did not affect bleomycin-induced fibrosis in either the lung or skin in vivo; had no effect on expression of pro-fibrotic genes by human lung fibroblasts, either at rest or following exposure to TGFbeta1; and did not modulate TGFbeta1-induced EMT in human lung epithelial cells. Taken together our data indicates that BMP-7 has no anti-fibrotic effect in lung or skin fibrosis either in vivo or in vitro. This suggests that the therapeutic options for BMP-7 may be confined to the renal compartment.
- Published
- 2008
- Full Text
- View/download PDF
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