1. Variable deletion and duplication at recombination junction ends: implication for staggered double-strand cleavage in class-switch recombination
- Author
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Kazuo Kinoshita, Tasuku Honjo, and Xiaochuan Chen
- Subjects
DNA, Complementary ,Molecular Sequence Data ,Somatic hypermutation ,chemical and pharmacologic phenomena ,Biology ,Cleavage (embryo) ,Immunoglobulin Switch Region ,law.invention ,Cell Line ,Mice ,law ,Gene Duplication ,Gene duplication ,Animals ,Humans ,Point Mutation ,Genetics ,Recombination, Genetic ,Multidisciplinary ,Base Sequence ,Genes, Immunoglobulin ,Immunoglobulin mu-Chains ,Point mutation ,Sequence Analysis, DNA ,Biological Sciences ,Immunoglobulin Class Switching ,Immunoglobulin class switching ,Chromosome Inversion ,Recombinant DNA ,Nucleic Acid Conformation ,Recombination ,Gene Deletion - Abstract
Immunoglobulin class-switch recombination (CSR) gives rise to looped-out circular DNA of a cleaved S segment, which is lost eventually after cell divisions. To understand the molecular mechanism of S region cleavage during CSR, we constructed artificial CSR substrates in which inversion-type CSR takes place to retain the cleaved S segment. Sequencing analyses of recombinant clones of these substrates revealed that varying degrees of deletions and duplications exist at CSR breakpoints, suggesting the involvement of staggered cleavage of the S region in CSR. In addition, mutations frequently found near junctions showed a similar profile of base replacement to Ig somatic hypermutation. These findings suggest that single-strand tails of staggered cleavage may be repaired by error-prone DNA synthesis.
- Published
- 2001