1. Elastic Registration-driven Deep Learning for Longitudinal Assessment of Systemic Sclerosis Interstitial Lung Disease at CT
- Author
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Rafael Marini, Mihir Sahasrabudhe, Anh Tuan Dinh-Xuan, Guillaume Chassagnon, Marie-Pierre Revel, Trieu-Nghi Hoang-Thi, Luc Mouthon, Alexis Régent, Bertrand Dunogué, Maria Vakalopoulou, Nikos Paragios, Service de Radiologie [CHU Cochin], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpital Cochin [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Centre de vision numérique (CVN), Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Université Paris-Saclay, Mathématiques et Informatique pour la Complexité et les Systèmes (MICS), CentraleSupélec-Université Paris-Saclay, OPtimisation Imagerie et Santé (OPIS), Inria Saclay - Ile de France, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre de vision numérique (CVN), Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Université Paris-Saclay-CentraleSupélec-Université Paris-Saclay, Service de médecine interne et centre de référence des maladies rares [CHU Cochin], TheraPanacea [Paris], and AP-HP - Hôpital Cochin Broca Hôtel Dieu [Paris]
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Male ,medicine.medical_specialty ,Vital capacity ,Supine position ,[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/Imaging ,[SDV]Life Sciences [q-bio] ,030218 nuclear medicine & medical imaging ,Pulmonary function testing ,[INFO.INFO-AI]Computer Science [cs]/Artificial Intelligence [cs.AI] ,03 medical and health sciences ,0302 clinical medicine ,Deep Learning ,Interquartile range ,Diffusing capacity ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,[INFO]Computer Science [cs] ,Longitudinal Studies ,Lung ,Retrospective Studies ,Scleroderma, Systemic ,business.industry ,Interstitial lung disease ,Middle Aged ,medicine.disease ,Confidence interval ,3. Good health ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Radiographic Image Interpretation, Computer-Assisted ,Female ,Radiology ,business ,Lung Diseases, Interstitial ,Tomography, X-Ray Computed - Abstract
International audience; In patients with systemic sclerosis, a deep learning classifier applied to elastic registration of chest CT images depicted lung shrinkage and functional worsening with high accuracy.BackgroundLongitudinal follow-up of interstitial lung diseases (ILDs) at CT mainly relies on the evaluation of the extent of ILD, without accounting for lung shrinkage.PurposeTo develop a deep learning–based method to depict worsening of ILD based on lung shrinkage detection from elastic registration of chest CT scans in patients with systemic sclerosis (SSc).Materials and MethodsPatients with SSc evaluated between January 2009 and October 2017 who had undergone at least two unenhanced supine CT scans of the chest and pulmonary function tests (PFTs) performed within 3 months were retrospectively included. Morphologic changes on CT scans were visually assessed by two observers and categorized as showing improvement, stability, or worsening of ILD. Elastic registration between baseline and follow-up CT images was performed to obtain deformation maps of the whole lung. Jacobian determinants calculated from the deformation maps were given as input to a deep learning–based classifier to depict morphologic and functional worsening. For this purpose, the set was randomly split into training, validation, and test sets. Correlations between mean Jacobian values and changes in PFT measurements were evaluated with the Spearman correlation.ResultsA total of 212 patients (median age, 53 years; interquartile range, 45–62 years; 177 women) were included as follows: 138 for the training set (65%), 34 for the validation set (16%), and 40 for the test set (21%). Jacobian maps demonstrated lung parenchyma shrinkage of the posterior lung bases in patients found to have worsened ILD at visual assessment. The classifier detected morphologic and functional worsening with an accuracy of 80% (32 of 40 patients; 95% confidence interval [CI]: 64%, 91%) and 83% (33 of 40 patients; 95% CI: 67%, 93%), respectively. Jacobian values correlated with changes in forced vital capacity (R = −0.38; 95% CI: −0.25, −0.49; P < .001) and diffusing capacity for carbon monoxide (R = −0.42; 95% CI: −0.27, −0.54; P < .001).ConclusionElastic registration of CT scans combined with a deep learning classifier aided in the diagnosis of morphologic and functional worsening of interstitial lung disease in patients with systemic sclerosis.
- Published
- 2020
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