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The recent and continuous development of unmanned aerial vehicles (UAV) and small cameras with different spectral resolutions and imaging systems promotes new remote sensing platforms that can supply ultra-high spatial and temporal resolution, filling the gap between ground-based surveys and orbital sensors. This work aimed to monitor siltation in two large rural and urban reservoirs by recording water color variations within a savanna biome in the central region of Brazil using a low cost and very light unmanned platform. Airborne surveys were conducted using a Parrot Sequoia camera (~0.15 kg) onboard a DJI Phantom 4 UAV (~1.4 kg) during dry and rainy seasons over inlet areas of both reservoirs. Field measurements of total suspended solids (TSS) and water clarity were made jointly with the airborne survey campaigns. Field hyperspectral radiometry data were also collected during two field surveys. Bio-optical models for TSS were tested for all spectral bands of the Sequoia camera. The near-infrared single band was found to perform the best (R2: 0.94; RMSE: 7.8 mg L−1) for a 0–180 mg L−1 TSS range and was used to produce time series of TSS concentration maps of the study areas. This flexible platform enabled monitoring of the increase of TSS concentration at a ~13 cm spatial resolution in urban and rural drainages in the rainy season. Aerial surveys allowed us to map TSS load fluctuations in a 1 week period during which no satellite images were available due to continuous cloud coverage in the rainy season. This work demonstrates that a low-cost configuration allows dense TSS monitoring at the inlet areas of reservoirs and thus enables mapping of the sources of sediment inputs, supporting the definition of mitigation plans to limit the siltation process.

In 2015, an emergency state was declared in Bolivia when Poopó Lake dried up. Climate variability and the increasing need for water are potential factors responsible for this situation. Because field data are missing over the region, no statements are possible about the influence of mentioned factors. This study is a preliminary step toward the understanding of Poopó Lake drought using remote sensing data. First, atmospheric corrections for Landsat (FLAASH and L8SR), seven satellite derived indexes for extracting water bodies, MOD16 evapotranspiration, PERSIANN-CDR and MSWEP rainfall products potentiality were assessed. Then, the fluctuations of Poopó Lake extent over the last 26 years are presented for the first time jointly, with the mean regional annual rainfall. Three main droughts are highlighted between 1990 and 2015: two are associated with negative annual rainfall anomalies in 1994 and 1995 and one associated with positive annual rainfall anomaly in 2015. This suggests that other factors than rainfall influenced the recent disappearance of the lake. The regional evapotranspiration increased by 12.8% between 2000 and 2014. Evapotranspiration increase is not homogeneous over the watershed but limited over the main agriculture regions. Agriculture activity is one of the major factors contributing to the regional desertification and recent disappearance of Poopó Lake.