1. Identification ofIL-7as a candidate disease mediator in osteoarthritis in Chinese Han population: a case-control study
- Author
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Xiong-xiong Lu, Shun-yuan Lu, Jie Liu, Yan-gui Wang, and Hong-xin Zhang
- Subjects
Male ,0301 basic medicine ,China ,medicine.medical_specialty ,Genotype ,Single-nucleotide polymorphism ,Polymorphism, Single Nucleotide ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Asian People ,Gene Frequency ,Rheumatology ,Risk Factors ,Polymorphism (computer science) ,Internal medicine ,medicine ,Humans ,Genetic Predisposition to Disease ,Pharmacology (medical) ,Allele ,Allele frequency ,Retrospective Studies ,030203 arthritis & rheumatology ,Genetics ,business.industry ,Interleukin-7 ,Haplotype ,Case-control study ,Odds ratio ,Middle Aged ,Osteoarthritis, Knee ,030104 developmental biology ,Haplotypes ,Case-Control Studies ,Female ,business - Abstract
OBJECTIVES Little is known about the biochemical mediators IL-7 that correlate with the initiation and progression of OA. We performed this study to assess the role of variants of IL-7 in OA susceptibility in the Chinese Han population. METHODS We performed a retrospective, case-control study in the Chinese Han population from 2013 to 2015. Four single nucleotide polymorphisms were genotyped (using a ligase detection reaction) in 602 patients and 454 controls. Differences between groups were analysed, and association was assessed by the odds ratio (OR) and 95% CI. RESULTS Among these polymorphisms, rs2583764, rs2583760 and rs6993386 showed no significant association with OA in the Chinese Han population {rs2583764 [P-allele = 0.98651, P-genotype = 0.40392, OR (95% CI): 1.00162 (0.83066, 1.20775)]; rs2583760 [P-allele = 0.384500, P-genotype = 0.58752, OR (95% CI): 0.69859 (0.30996, 1.57449)]; rs6993386 [P-allele = 0.69525, P-genotype = 0.50712, OR (95% CI): 0.96432 (0.80406, 1.15653)]}. However, the results showed that the rs2583759 polymorphism was significantly associated with OA [P-allele = 0.00 P-genotype = 3.86 × 10(-30), OR (95% CI): 0.27794 (0.22407, 0.34476)], even when the 10 000 times permutation was performed (P-allele-permutation < 0.00010, P-genotype-permutation = 0.00010). Haplotype analyses showed A-G-A-C, A-G-A-T and G-G-G-C of rs2583764-rs2583760-rs6993386-rs2583759 were risk factors for OA, both before or after the 10 000 times permutation, indicating IL-7 to be associated with OA. CONCLUSION There was a significant association between IL-7, especially rs2583759, and OA in the Chinese Han population.
- Published
- 2016
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