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This paper reviews both the recent and longer-term (Holocene) ecological history of coral reefs in the South China Sea (SCS). (1) Local ecological monitoring since the 1960s shows that the coral reefs in the South China Sea have declined dramatically, reflecting the rapid decrease of living coral cover and the great loss of symbiotic zooxanthellae. Collectively, this has led to a significant decrease of annual CaCO production. Heavy anthropogenic activities and global warming are recognized as major triggers of the observed coral reef degradation. Observations show that the modern coral reefs in the SCS are a source of atmospheric CO in summer. (2) Coral reefs of the SCS have been widely used to reveal longer-term environmental variations, including Holocene high-resolution sea surface temperature (SST) and abrupt climate events, millennial-scale El Niño variations, millennial- and centennial-scale sea level oscillations, strong and cyclic storm activities, East Asian monsoon intensities, variation in seawater pH, and recent seawater pollution. (3) Coral reefs of the southern SCS have experienced repeated episodes of bleaching over the last 200 years due to high SST and intense El Niño events; coral reefs of the northern SCS suffered high levels of mortality during several abrupt winter cold-water bleaching events during the middle Holocene warm period. On average, recovery after the middle Holocene cold-bleaching took 20-30 years; recovery following other middle Holocene environmental stresses took approximately 10-20 years. Such findings have significantly contributed to the understanding of the present ecological pressures faced by the coral reefs in the SCS, the histories of Holocene climate/environment changes, and the long-term models of coral reef responses to various past environmental changes. [ABSTRACT FROM AUTHOR]

The two key mechanisms for biologically driven carbon sequestration in oceans are the biological pump (BP) and the microbial carbon pump (MCP); the latter is scarcely simulated and quantified in the China seas. In this study, we developed a coupled physical-ecosystem model with major MCP processes in the South China Sea (SCS). The model estimated a SCS-averaged MCP rate of 1.55 mg C m−2 d−1, with an MCP-to-BP ratio of 1:6.08 when considering the BP at a depth of 1000 m. Moreover, the ecosystem responses were projected in two representative global warming scenarios where the sea surface temperature increased by 2 and 4°C. The projection suggested a declined productivity associated with the increased near-surface stratification and decreased nutrient supply, which leads to a reduction in diatom biomass and consequently the suppression of the BP. However, the relative ratio of picophytoplankton increased, inducing a higher microbial activity and a nonlinear response of MCP to the increase in temperature. On average, the ratio of MCP-to-BP at a 1000-m depth increased to 1:5.95 with surface warming of 4°C, indicating the higher impact of MCP in future ocean carbon sequestration. [ABSTRACT FROM AUTHOR]