18 results on '"Sekiguchi H"'
Search Results
2. Nanoscale Dynamics of Protein Assembly Networks in Supersaturated Solutions
- Author
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Matsushita, Y., primary, Sekiguchi, H., additional, Wong, C. Jae, additional, Nishijima, M., additional, Ikezaki, K., additional, Hamada, D., additional, Goto, Y., additional, and Sasaki, Y. C., additional
- Published
- 2017
- Full Text
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3. Visualization of tumor-related blood vessels in human breast by photoacoustic imaging system with a hemispherical detector array
- Author
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Toi, M., primary, Asao, Y., additional, Matsumoto, Y., additional, Sekiguchi, H., additional, Yoshikawa, A., additional, Takada, M., additional, Kataoka, M., additional, Endo, T., additional, Kawaguchi-Sakita, N., additional, Kawashima, M., additional, Fakhrejahani, E., additional, Kanao, S., additional, Yamaga, I., additional, Nakayama, Y., additional, Tokiwa, M., additional, Torii, M., additional, Yagi, T., additional, Sakurai, T., additional, Togashi, K., additional, and Shiina, T., additional
- Published
- 2017
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4. Time-resolved X-ray Tracking of Expansion and Compression Dynamics in Supersaturating Ion-Networks
- Author
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Matsushita, Y., primary, Sekiguchi, H., additional, Ichiyanagi, K., additional, Ohta, N., additional, Ikezaki, K., additional, Goto, Y., additional, and Sasaki, Y. C., additional
- Published
- 2015
- Full Text
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5. Precise phase retrieval for propagation-based images using discrete mathematics.
- Author
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Pollock JA, Morgan KS, Croton LCP, Croughan MK, Ruben G, Yagi N, Sekiguchi H, and Kitchen MJ
- Subjects
- Phantoms, Imaging, Photons, Mathematics, Tomography, X-Ray Computed methods, Algorithms
- Abstract
The ill-posed problem of phase retrieval in optics, using one or more intensity measurements, has a multitude of applications using electromagnetic or matter waves. Many phase retrieval algorithms are computed on pixel arrays using discrete Fourier transforms due to their high computational efficiency. However, the mathematics underpinning these algorithms is typically formulated using continuous mathematics, which can result in a loss of spatial resolution in the reconstructed images. Herein we investigate how phase retrieval algorithms for propagation-based phase-contrast X-ray imaging can be rederived using discrete mathematics and result in more precise retrieval for single- and multi-material objects and for spectral image decomposition. We validate this theory through experimental measurements of spatial resolution using computed tomography (CT) reconstructions of plastic phantoms and biological tissues, using detectors with a range of imaging system point spread functions (PSFs). We demonstrate that if the PSF substantially suppresses high spatial frequencies, the potential improvement from utilising the discrete derivation is limited. However, with detectors characterised by a single pixel PSF (e.g. direct, photon-counting X-ray detectors), a significant improvement in spatial resolution can be obtained, demonstrated here at up to 17%., (© 2022. The Author(s).)
- Published
- 2022
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6. Publisher Correction: Acoustic levitation and rotation of thin films and their application for room temperature protein crystallography.
- Author
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Kepa MW, Tomizaki T, Sato Y, Ozerov D, Sekiguchi H, Yasuda N, Aoyama K, Skopintsev P, Standfuss J, Cheng R, Hennig M, and Tsujino S
- Published
- 2022
- Full Text
- View/download PDF
7. Acoustic levitation and rotation of thin films and their application for room temperature protein crystallography.
- Author
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Kepa MW, Tomizaki T, Sato Y, Ozerov D, Sekiguchi H, Yasuda N, Aoyama K, Skopintsev P, Standfuss J, Cheng R, Hennig M, and Tsujino S
- Subjects
- Crystallography, Temperature, Water chemistry, Acoustics, Proteins
- Abstract
Acoustic levitation has attracted attention in terms of chemical and biochemical analysis in combination with various analytical methods because of its unique container-less environment for samples that is not reliant on specific material characteristics. However, loading samples with very high viscosity is difficult. To expand the scope, we propose the use of polymer thin films as sample holders, whereby the sample is dispensed on a film that is subsequently loaded onto an acoustic levitator. When applied for protein crystallography experiments, rotation controllability and positional stability are important prerequisites. We therefore study the acoustic levitation and rotation of thin films with an aspect ratio (the diameter-to-thickness ratio) of 80-240, which is an order of magnitude larger than those reported previously. For films with empirically optimized shapes, we find that it is possible to control the rotation speed in the range of 1-4 rotations per second while maintaining a positional stability of 12 ± 5 µm. The acoustic radiation force acting on the films is found to be a factor of 26-30 higher than that for same-volume water droplets. We propose use cases of the developed films for protein crystallography experiments and demonstrate data collections for large single crystal samples at room temperature., (© 2022. The Author(s).)
- Published
- 2022
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8. Acquisition of novel ball-related skills associated with sports experience.
- Author
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Sekiguchi H, Yamanaka K, Takeuchi S, Futatsubashi G, Kadota H, Miyazaki M, and Nakazawa K
- Subjects
- Athletic Performance psychology, Exercise, Female, Humans, Male, Sports psychology, Transcranial Magnetic Stimulation, Young Adult, Athletic Performance physiology, Motor Skills physiology, Psychomotor Performance physiology, Pyramidal Tracts physiology, Sports physiology
- Abstract
Some individuals can quickly acquire novel motor skills, while others take longer. This study aimed to investigate the relationships between neurophysiological state, sports experience, and novel ball-related skill acquisition. We enrolled 28 healthy collegiate participants. The participants' neurophysiological data (input-output curve of the corticospinal tract) were recorded through transcranial magnetic stimulation. Subsequently, the participants performed a novel motor task (unilateral two-ball juggling) on a different day, after which they reported their previous sports experience (types and years). We found that individuals with more years of experience in ball sports showed faster acquisition of novel ball-related skills. Further, this result was not limited to any single ball sport. Therefore, the acquisition of novel ball-related skills is associated with familiarity with a ball's nature. Furthermore, gain of the corticospinal tract was negatively and positively correlated with the years of experience in primary ball and non-ball sports (implemented for the longest time in individuals), respectively. These results could be associated with the extent of proficiency in their primary sport. The chosen type of sports (e.g., ball or non-ball) could critically influence the future acquisition of novel motor skills. This study provides important insights regarding how to approach sports and physical activities.
- Published
- 2021
- Full Text
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9. Baseline low-density lipoprotein cholesterol predicts the benefit of adding ezetimibe on statin in statin-naïve acute coronary syndrome.
- Author
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Im J, Kawada-Watanabe E, Yamaguchi J, Arashi H, Otsuki H, Matsui Y, Sekiguchi H, Fujii S, Mori F, Ogawa H, and Hagiwara N
- Subjects
- Aged, Endpoint Determination, Female, Humans, Male, Treatment Outcome, Acute Coronary Syndrome drug therapy, Acute Coronary Syndrome metabolism, Cholesterol, LDL metabolism, Ezetimibe therapeutic use, Hydroxymethylglutaryl-CoA Reductase Inhibitors therapeutic use
- Abstract
We aimed to evaluate the effect of baseline low-density lipoprotein cholesterol (LDL-C) on the outcomes of patients with the acute coronary syndrome (ACS) receiving pitavastatin monotherapy or the combination of pitavastatin + ezetimibe. In the HIJ-PROPER study, 1734 ACS patients with dyslipidemia were randomly assigned to receive pitavastatin or pitavastatin + ezetimibe therapy. Statin-naïve participants (n = 1429) were divided into two groups based on the median LDL-C level (131 mg/dL) at enrollment. The primary endpoint was a composite of all-cause death, non-fatal myocardial infarction, non-fatal stroke, unstable angina, and ischemia-driven coronary revascularization. The median follow-up was 3.2 years. In the < 131 mg/dL group (n = 686), LDL-C changes were - 34.0% and - 49.8% in the pitavastatin monotherapy and pitavastatin + ezetimibe-treated groups (P < 0.0001), respectively; in the ≥ 131 mg/dL group (n = 743), LDL-C changes were - 42.9% and - 56.4% (P < 0.0001, respectively. Kaplan-Meier analyses revealed that the primary endpoint was not significantly different between the treatment groups for the < 131 mg/dL group, however, it was significantly lower in patients treated with pitavastatin + ezetimibe in the ≥ 131 mg/dL group (Hazard ratio = 0.72, 95% confidence interval = 0.56-0.91, P = 0.007, P value for interaction = 0.012). Statin-naïve ACS patients with baseline LDL-C < 131 mg/dL did not clinically benefit from pitavastatin + ezetimibe, while patients with baseline LDL-C ≥ 131 mg/dL treated with pitavastatin + ezetimibe showed better clinical results than those treated with pitavastatin monotherapy.Clinical Trial Registration: Original HIJ PROPER study; URL: http://www.umin.ac.jp/ctr . Unique Identifier; UMIN000002742, registered as an International Standard Randomized Controlled Trial.
- Published
- 2021
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10. Tilting and rotational motions of silver halide crystal with diffracted X-ray blinking.
- Author
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Kuramochi M, Omata H, Ishihara M, Hanslin SØ, Mizumaki M, Kawamura N, Osawa H, Suzuki M, Mio K, Sekiguchi H, and Sasaki YC
- Abstract
The dynamic properties of crystalline materials are important for understanding their local environment or individual single-grain motions. A new time-resolved observation method is required for use in many fields of investigation. Here, we developed in situ diffracted X-ray blinking to monitor high-resolution diffraction patterns from single-crystal grains with a 50 ms time resolution. The diffraction spots of single grains of silver halides and silver moved in the θ and χ directions during the photolysis chemical reaction. The movements of the spots represent tilting and rotational motions. The time trajectory of the diffraction intensity reflecting those motions was analysed by using single-pixel autocorrelation function (sp-ACF). Single-pixel ACF analysis revealed significant differences in the distributions of the ACF decay constants between silver halides, suggesting that the motions of single grains are different between them. The rotational diffusion coefficients for silver halides were estimated to be accurate at the level of approximately 0.1 to 0.3 pm
2 /s. Furthermore, newly formed silver grains on silver halides correlated with their ACF decay constants. Our high-resolution atomic scale measurement-sp-ACF analysis of diffraction patterns of individual grains-is useful for evaluating physical properties that are broadly applicable in physics, chemistry, and materials science.- Published
- 2021
- Full Text
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11. Prominent luminescence of silicon-vacancy defects created in bulk silicon carbide p-n junction diodes.
- Author
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Nagasawa F, Takamura M, Sekiguchi H, Miyamae Y, Oku Y, and Nakahara K
- Abstract
We investigate fluorescent defect centers in 4H silicon carbide p-n junction diodes fabricated via aluminum-ion implantation into an n-type bulk substrate without the use of an epitaxial growth process. At room temperature, electron-irradiated p-n junction diodes exhibit electroluminescence originating from silicon-vacancy defects. For a diode exposed to an electron dose of [Formula: see text] at [Formula: see text], the electroluminescence intensity of these defects is most prominent within a wavelength range of 400-[Formula: see text]. The commonly observed [Formula: see text] emission was sufficiently suppressed in the electroluminescence spectra of all the fabricated diodes, while it was detected in the photoluminescence measurements. The photoluminescence spectra also displayed emission lines from silicon-vacancy defects.
- Published
- 2021
- Full Text
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12. Diffracted X-ray Blinking Tracks Single Protein Motions.
- Author
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Sekiguchi H, Kuramochi M, Ikezaki K, Okamura Y, Yoshimura K, Matsubara K, Chang JW, Ohta N, Kubo T, Mio K, Suzuki Y, Chavas LMG, and Sasaki YC
- Subjects
- Acetylcholine chemistry, Cryoelectron Microscopy methods, Microscopy, Electron, Transmission methods, Motion, Proteins chemistry, X-Ray Diffraction methods
- Abstract
Single molecule dynamics studies have begun to use quantum probes. Single particle analysis using cryo-transmission electron microscopy has dramatically improved the resolution when studying protein structures and is shifting towards molecular motion observations. X-ray free-electron lasers are also being explored as routes for determining single molecule structures of biological entities. Here, we propose a new X-ray single molecule technology that allows observation of molecular internal motion over long time scales, ranging from milliseconds up to 10
3 seconds. Our method uses both low-dose monochromatic X-rays and nanocrystal labelling technology. During monochromatic X-ray diffraction experiments, the intensity of X-ray diffraction from moving single nanocrystals appears to blink because of Brownian motion in aqueous solutions. X-ray diffraction spots from moving nanocrystals were observed to cycle in and out of the Bragg condition. Consequently, the internal motions of a protein molecule labelled with nanocrystals could be extracted from the time trajectory using this diffracted X-ray blinking (DXB) approach. Finally, we succeeded in distinguishing the degree of fluctuation motions of an individual acetylcholine-binding protein (AChBP) interacting with acetylcholine (ACh) using a laboratory X-ray source.- Published
- 2018
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13. Visualising peripheral arterioles and venules through high-resolution and large-area photoacoustic imaging.
- Author
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Matsumoto Y, Asao Y, Sekiguchi H, Yoshikawa A, Ishii T, Nagae KI, Kobayashi S, Tsuge I, Saito S, Takada M, Ishida Y, Kataoka M, Sakurai T, Yagi T, Kabashima K, Suzuki S, Togashi K, Shiina T, and Toi M
- Subjects
- Algorithms, Equipment Design, Female, Humans, Photoacoustic Techniques methods, Tomography methods, Arterioles diagnostic imaging, Photoacoustic Techniques instrumentation, Tomography instrumentation, Venules diagnostic imaging
- Abstract
Photoacoustic (PA) imaging (PAI) has been shown to be a promising tool for non-invasive blood vessel imaging. A PAI system comprising a hemispherical detector array (HDA) has been reported previously as a method providing high morphological reproducibility. However, further improvements in diagnostic capability will require improving the image quality of PAI and fusing functional and morphological imaging. Our newly developed PAI system prototype not only enhances the PA image resolution but also acquires ultrasonic (US) B-mode images at continuous positions in the same coordinate axes. In addition, the pulse-to-pulse alternating laser irradiation shortens the measurement time difference between two wavelengths. We scanned extremities and breasts in an imaging region 140 mm in diameter and obtained 3D-PA images of fine blood vessels, including arterioles and venules. We could estimate whether a vessel was an artery or a vein by using the S-factor obtained from the PA images at two wavelengths, which corresponds approximately to the haemoglobin oxygen saturation. Furthermore, we observed tumour-related blood vessels around breast tumours with unprecedented resolution. In the future, clinical studies with our new PAI system will help to elucidate various mechanisms of vascular-associated diseases and events.
- Published
- 2018
- Full Text
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14. Platonic Micelles: Monodisperse Micelles with Discrete Aggregation Numbers Corresponding to Regular Polyhedra.
- Author
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Fujii S, Yamada S, Matsumoto S, Kubo G, Yoshida K, Tabata E, Miyake R, Sanada Y, Akiba I, Okobira T, Yagi N, Mylonas E, Ohta N, Sekiguchi H, and Sakurai K
- Abstract
The concept of micelles was first proposed in 1913 by McBain and has rationalized numerous experimental results of the self-aggregation of surfactants. It is generally agreed that the aggregation number (N
agg ) for spherical micelles has no exact value and a certain distribution. However, our studies of calix[4]arene surfactants showed that they were monodisperse with a defined Nagg whose values are chosen from 6, 8, 12, 20, and 32. Interestingly, some of these numbers coincide with the face numbers of Platonic solids, thus we named them "Platonic micelles". The preferred Nagg values were explained in relation to the mathematical Tammes problem: how to obtain the best coverage of a sphere surface with multiple identical circles. The coverage ratio D(N) can be calculated and produces maxima at N = 6, 12, 20, and 32, coinciding with the observed Nagg values. We presume that this "Platonic nature" may hold for any spherical micelles when Nagg is sufficiently small.- Published
- 2017
- Full Text
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15. A small-angle X-ray scattering study of alpha-synuclein from human red blood cells.
- Author
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Araki K, Yagi N, Nakatani R, Sekiguchi H, So M, Yagi H, Ohta N, Nagai Y, Goto Y, and Mochizuki H
- Subjects
- Chromatography, Gel, Humans, Recombinant Proteins metabolism, Erythrocytes metabolism, Scattering, Small Angle, X-Ray Diffraction, alpha-Synuclein blood
- Abstract
α-synuclein (α-syn) is the main component of Lewy bodies, which are neuropathological hallmarks of patients with Parkinson's disease. As it has been controversial whether human α-syn from erythrocytes exists as a tetramer under physiological conditions, we tried solving this issue by the small-angle X-ray solution scattering method. Under two different conditions (high ionic strength with a Tris buffer and low ionic strength with an ammonium acetate buffer), no evidence was found for the presence of tetramer. When comparing erythrocyte and recombinant α-syn molecules, we found no significant difference of the molecular weight and the secondary structure although the buffer conditions strongly affect the radius of gyration of the protein. The results indicate that, even though a stable tetramer may not be formed, conformation of α-syn depends much on its environment, which may be the reason for its tendency to aggregate in cells.
- Published
- 2016
- Full Text
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16. Dissociating the neural correlates of tactile temporal order and simultaneity judgements.
- Author
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Miyazaki M, Kadota H, Matsuzaki KS, Takeuchi S, Sekiguchi H, Aoyama T, and Kochiyama T
- Subjects
- Adult, Brain diagnostic imaging, Female, Humans, Magnetic Resonance Imaging, Male, Young Adult, Brain physiology, Time Perception, Touch Perception
- Abstract
Perceiving temporal relationships between sensory events is a key process for recognising dynamic environments. Temporal order judgement (TOJ) and simultaneity judgement (SJ) are used for probing this perceptual process. TOJ and SJ exhibit identical psychometric parameters. However, there is accumulating psychophysical evidence that distinguishes TOJ from SJ. Some studies have proposed that the perceptual processes for SJ (e.g., detecting successive/simultaneity) are also included in TOJ, whereas TOJ requires more processes (e.g., determination of the temporal order). Other studies have proposed two independent processes for TOJ and SJ. To identify differences in the neural activity associated with TOJ versus SJ, we performed functional magnetic resonance imaging of participants during TOJ and SJ with identical tactile stimuli. TOJ-specific activity was observed in multiple regions (e.g., left ventral and bilateral dorsal premotor cortices and left posterior parietal cortex) that overlap the general temporal prediction network for perception and motor systems. SJ-specific activation was observed only in the posterior insular cortex. Our results suggest that TOJ requires more processes than SJ and that both TOJ and SJ implement specific process components. The neural differences between TOJ and SJ thus combine features described in previous psychophysical hypotheses that proposed different mechanisms.
- Published
- 2016
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17. Real time ligand-induced motion mappings of AChBP and nAChR using X-ray single molecule tracking.
- Author
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Sekiguchi H, Suzuki Y, Nishino Y, Kobayashi S, Shimoyama Y, Cai W, Nagata K, Okada M, Ichiyanagi K, Ohta N, Yagi N, Miyazawa A, Kubo T, and Sasaki YC
- Subjects
- Acetylcholine metabolism, Animals, Aplysia growth & development, Aplysia metabolism, Binding Sites, Bungarotoxins metabolism, Carrier Proteins metabolism, Crystallography, X-Ray, Models, Molecular, Protein Conformation, Receptors, Nicotinic metabolism, Torpedo growth & development, Torpedo metabolism, Acetylcholine chemistry, Bungarotoxins chemistry, Carrier Proteins chemistry, Receptors, Nicotinic chemistry
- Abstract
We observed the dynamic three-dimensional (3D) single molecule behaviour of acetylcholine-binding protein (AChBP) and nicotinic acetylcholine receptor (nAChR) using a single molecule tracking technique, diffracted X-ray tracking (DXT) with atomic scale and 100 μs time resolution. We found that the combined tilting and twisting motions of the proteins were enhanced upon acetylcholine (ACh) binding. We present the internal motion maps of AChBP and nAChR in the presence of either ACh or α-bungarotoxin (αBtx), with views from two rotational axes. Our findings indicate that specific motion patterns represented as biaxial angular motion maps are associated with channel function in real time and on an atomic scale.
- Published
- 2014
- Full Text
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18. Tracking 3D picometer-scale motions of single nanoparticles with high-energy electron probes.
- Author
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Ogawa N, Hoshisashi K, Sekiguchi H, Ichiyanagi K, Matsushita Y, Hirohata Y, Suzuki S, Ishikawa A, and Sasaki YC
- Subjects
- Solutions, Vacuum, Gold chemistry, Metal Nanoparticles chemistry, Models, Theoretical, Motion
- Abstract
We observed the high-speed anisotropic motion of an individual gold nanoparticle in 3D at the picometer scale using a high-energy electron probe. Diffracted electron tracking (DET) using the electron back-scattered diffraction (EBSD) patterns of labeled nanoparticles under wet-SEM allowed us to super-accurately measure the time-resolved 3D motion of individual nanoparticles in aqueous conditions. The highly precise DET data corresponded to the 3D anisotropic log-normal Gaussian distributions over time at the millisecond scale.
- Published
- 2013
- Full Text
- View/download PDF
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