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Algebraic multigrid (AMG) is one of the most widely used solution techniques for linear systems of equations arising from discretized partial differential equations. The popularity of AMG stems from its potential to solve linear systems in almost linear time, that is with an O(n) complexity, where n is the problem size. This capability is crucial at the present, where the increasing availability of massive HPC platforms pushes for the solution of very large problems. The key for a rapidly converging AMG method is a good interplay between the smoother and the coarse-grid correction, which in turn requires the use of an effective prolongation. From a theoretical viewpoint, the prolongation must accurately represent near kernel components and, at the same time, be bounded in the energy norm. For challenging problems, however, ensuring both these requirements is not easy and is exactly the goal of this work. We propose a constrained minimization procedure aimed at reducing prolongation energy while preserving the near kernel components in the span of interpolation. The proposed algorithm is based on previous energy minimization approaches utilizing a preconditioned restricted conjugate gradients method, but has new features and a specific focus on parallel performance and implementation. It is shown that the resulting solver, when used for large real-world problems from various application fields, exhibits excellent convergence rates and scalability and outperforms at least some more traditional AMG approaches. [ABSTRACT FROM AUTHOR]

The numerical simulation of physical systems has become in recent years a fundamental tool to perform analyses and predictions in several application fields, spanning from industry to the academy. As far as large-scale simulations are concerned, one of the most computationally expensive tasks is the solution of linear systems of equations arising from the discretization of the partial differential equations governing physical processes. This work presents Chronos, a collection of linear algebra functions specifically designed for the solution of large, sparse linear systems on massively parallel computers. Its emphasis is on modern, effective, and scalable Algebraic Multigrid (AMG) preconditioners for high performance computing (HPC). This work describes the numerical algorithms and the main structures of this software suite, especially from an implementation standpoint. Several numerical results arising from practical mechanics and fluid dynamics applications with hundreds of millions of unknowns are addressed and compared with other state-of-the-art linear solvers, proving Chronos's efficiency and robustness. [ABSTRACT FROM AUTHOR]

One of the most time-consuming tasks in the procedures for the numerical study of PDEs is the solution to linear systems of equations. To that purpose, iterative solvers are viewed as a promising alternative to direct methods on high-performance computers since, in theory, they are almost perfectly parallelizable. Their main drawback is the need of finding a suitable preconditioner to accelerate convergence. The factorized sparse approximate inverse (FSAI), mainly in its adaptive form, has proven to be an effective parallel preconditioner for several problems. In the present work, we report about two novel ideas to dynamically compute, on graphics processing units (GPUs), the FSAI sparsity pattern, which is the main task in its setup. The first approach, borrowed from the CPU implementation, uses a global array as a nonzero indicator, whereas the second one relies on a merge-sort procedure of multiple arrays. We will show that the second approach requires significantly less memory and overcomes issues related to the limited global memory available on GPUs. Numerical tests prove that the GPU implementation of FSAI allows for an average speed-up of 7.5 over a parallel CPU implementation. Moreover, we will show that the preconditioner computation is still feasible using single precision arithmetic with a further 20% reduction of the setup cost. Finally, the strong scalability of the overall approach in shown in a multi-GPU setting. [ABSTRACT FROM AUTHOR]

The numerical simulation of modern engineering problems can easily incorporate millions or even billions of unknowns. In several applications, sparse linear systems with symmetric positive definite matrices need to be solved, and algebraic multigrid (AMG) methods represent common choices for the role of iterative solvers or preconditioners. The reason for their popularity relies on the fast convergence that these methods provide even in the solution of large size problems, which is a consequence of the AMG ability to reduce particular error components across their multilevel hierarchy. Despite carrying the name "algebraic," most of these methods still make assumptions on additional information other than the global assembled matrix, such as the knowledge of the operator's near kernel, which limits their applicability as black-box solvers. In this work, we introduce a novel AMG approach featuring the adaptive factored sparse approximate inverse (aFSAI) method as a flexible smoother, as well as three new approaches to adaptively compute the prolongation operator. We assess the performance of the proposed AMG through the solution of a set of model problems along with real-world engineering test cases. Moreover, we perform comparisons to other methods such as the aFSAI and BoomerAMG preconditioners, showing that our new method proves to be superior to the first strategy and comparable to the second one, if not better, as in the solution of linear elasticity models. [ABSTRACT FROM AUTHOR]

Graphics Processing Units (GPUs) exhibit significantly higher peak performance than conventional CPUs. However, in general only highly parallel algorithms can exploit their potential. In this scenario, the iterative solution to sparse linear systems of equations could be carried out quite efficiently on a GPU as it requires only matrix-by-vector products, dot products, and vector updates. However, to be really effective, any iterative solver needs to be properly preconditioned and this represents a major bottleneck for a successful GPU implementation. Due to its inherent parallelism, the factored sparse approximate inverse (FSAI) preconditioner represents an optimal candidate for the conjugate gradient-like solution of sparse linear systems. However, its GPU implementation requires a nontrivial recasting of multiple computational steps. We present our GPU version of the FSAI preconditioner along with a set of results that show how a noticeable speedup with respect to a highly tuned CPU counterpart is obtained. [ABSTRACT FROM AUTHOR]

In recent years the growing popularity of supercomputers has fostered the development of algorithms able to take advantage of the massive parallelism offered by multiple processors. Direct methods, though robust and computationally efficient, hardly exploit high degrees of parallelism. By contrast, Krylov methods preconditioned by Factored Sparse Approximate Inverses (FSAI) provide, at least in principle, a perfectly parallel approach but are often thwarted by an excessive set-up cost. In this paper we extend the concept of supernode from sparse LU factorizations to approximate inverses, and use it to accelerate the computation of an FSAI-type preconditioner. The numerical experiments on real-world problems show that the overall FSAI efficiency can be significantly increased while preserving its intrinsic parallelism. [ABSTRACT FROM AUTHOR]