1. Capripoxvirus G-protein-coupled chemokine receptor: a host-range gene suitable for virus animal origin discrimination
- Author
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Christian Le Goff, Amélie Chadeyras, David B. Wallace, Hafsa Madani, Eeva S.M. Tuppurainen, Salah Hammami, Charles Euloge Lamien, Elexpeter Aba-Adulugba, Geneviève Libeau, Adama Diallo, Philippe Caufour, Velý Gulyaz, Tajelser Adam, Emmanuel Albina, Emna Fakhfakh, Roland Silber, Inconnu, Contrôle des maladies animales exotiques et émergentes (UMR CMAEE), and Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)
- Subjects
[SDV]Life Sciences [q-bio] ,viruses ,Sequence Homology ,Poxviridae Infections ,medicine.disease_cause ,L73 - Maladies des animaux ,Capripoxvirus ,Receptors, G-Protein-Coupled ,0403 veterinary science ,Cluster Analysis ,Caprin ,ComputingMilieux_MISCELLANEOUS ,Genetics ,0303 health sciences ,biology ,Goats ,04 agricultural and veterinary sciences ,Lumpy skin disease virus ,3. Good health ,Receptors, Chemokine ,Ovin ,Genotype ,040301 veterinary sciences ,Molecular Sequence Data ,Virus ,03 medical and health sciences ,Viral Proteins ,Lumpy skin disease ,Virology ,Sheeppox virus ,medicine ,Animals ,Poxviridae ,030304 developmental biology ,Sheeppox ,Bovin ,Polymorphism, Genetic ,Sheep ,Goatpox virus ,Sequence Analysis, DNA ,biology.organism_classification ,medicine.disease ,DNA, Viral ,Cattle - Abstract
The genus Capripoxvirus within the family Poxviridae comprises three closely related viruses, namely goat pox, sheep pox and lumpy skin disease viruses. This nomenclature is based on the animal species from which the virus was first isolated, respectively, goat, sheep and cattle. Since capripoxviruses are serologically identical, their specific identification relies exclusively on the use of molecular tools. We describe here the suitability of the G-protein-coupled chemokine receptor (GPCR) gene for use in host-range grouping of capripoxviruses. The analysis of 58 capripoxviruses showed three tight genetic clusters consisting of goat pox, sheep pox and lumpy skin disease viruses. However, a few discrepancies exist with the classical virus–host origin nomenclature: a virus isolated from sheep is grouped in the goat poxvirus clade and vice versa. Intra-group diversity was further observed for the goat pox and lumpy skin disease virus isolates. Despite the presence of nine vaccine strains, no genetic determinants of virulence were identified on the GPCR gene. For sheep poxviruses, the addition or deletion of 21 nucleic acids (7 aa) was consistently observed in the 5′ terminal part of the gene. Specific signatures for each cluster were also identified. Prediction of the capripoxvirus GPCR topology, and its comparison with other known mammalian GPCRs and viral homologues, revealed not only a classical GPCR profile in the last three-quarters of the protein but also unique features such as a longer N-terminal end with a proximal hydrophobic α-helix and a shorter serine-rich C-tail.
- Published
- 2009
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