1. The Landscape of Atypical and Eukaryotic Protein Kinases
- Author
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Iwan J. P. de Esch, Thomas Wurdinger, Georgi K. Kanev, Bart A. Westerman, Rob Leurs, Albert J. Kooistra, and Chris de Graaf
- Subjects
0301 basic medicine ,Models, Molecular ,small-molecule kinase inhibitors ,SNP ,Tumor cells ,Antineoplastic Agents ,Computational biology ,oncogenic mutations ,Biology ,Toxicology ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,Structure-Activity Relationship ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,catalytic kinase domain structures ,Neoplasms ,selective kinase inhibitor design ,Humans ,Amino Acid Sequence ,Binding site ,Treatment resistance ,Protein Kinase Inhibitors ,Pharmacology ,Binding Sites ,Kinase ,eukaryotic and atypical protein kinases ,030104 developmental biology ,Protein Conformation, beta-Strand ,Protein Kinases ,030217 neurology & neurosurgery - Abstract
Kinases are attractive anticancer targets due to their central role in the growth, survival, and therapy resistance of tumor cells. This review explores the two primary kinase classes, the eukaryotic protein kinases (ePKs) and the atypical protein kinases (aPKs), and provides a structure-centered comparison of their sequences, structures, hydrophobic spines, mutation and SNP hotspots, and inhibitor interaction patterns. Despite the limited sequence similarity between these two classes, atypical kinases commonly share the archetypical kinase fold but lack conserved eukaryotic kinase motifs and possess altered hydrophobic spines. Furthermore, atypical kinase inhibitors explore only a limited number of binding modes both inside and outside the orthosteric binding site. The distribution of genetic variations in both classes shows multiple ways they can interfere with kinase inhibitor binding. This multilayered review provides a research framework bridging the eukaryotic and atypical kinase classes.
- Published
- 2019
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