1. The effect of haplotypes in the promoter region of SIRT4 gene on the ultrasound traits in Qinchuan cattle
- Author
-
Linsheng Gui, Mujahid Ali Shah, Hua Wu, Sayed Haidar Abbas Raza, and Nicola M. Schreurs
- Subjects
040301 veterinary sciences ,Single-nucleotide polymorphism ,Polymorphism, Single Nucleotide ,0403 veterinary science ,Food Animals ,Animals ,Sirtuins ,Gene ,Genetic Association Studies ,Ultrasonography ,Genetic association ,Genetics ,biology ,Haplotype ,0402 animal and dairy science ,Promoter ,Lipid metabolism ,04 agricultural and veterinary sciences ,040201 dairy & animal science ,Haplotypes ,Sirtuin ,Body Composition ,biology.protein ,Cattle ,Animal Science and Zoology ,Intramuscular fat - Abstract
Sirtuin 4 (SIRT4) belongs to the mitochondrial sirtuin class of NAD+-dependent protein deacylases. This gene plays an important role in the regulation of lipid metabolism, cellular growth, and metabolism in mammals. Here, potential polymorphisms were sought in the bovine SIRT4 gene, and the relationships between the detected polymorphisms and carcass quality in Qinchuan cattle were assessed. Four single nucleotide polymorphisms (SNPs) were identified in the promoter region of the SIRT4 gene from the sequencing results of 452 individual cattle. A total of 8 different haplotypes were identified. Of these, the 3 most frequently observed haplotypes had frequencies of 35.0% (-CTG-), 18.3% (-CTA-), and 12.9% (-CCG-). The frequencies of g.-311C > T, g.-771C > T, and g.-1022G > A conformed to Hardy-Weinberg equilibrium in all the samples (chi-square test, P
- Published
- 2019
- Full Text
- View/download PDF