1. [Etiological characterization of invasive non-typhoid Salmonella strains in Guangdong Province from 2018 to 2022].
- Author
-
Zou M, He DM, Xu J, Cheng Q, Ouyang FZ, Chen LY, Chen QF, Ke CW, and Ke BX
- Subjects
- Humans, China epidemiology, Salmonella enteritidis genetics, Salmonella enteritidis isolation & purification, Salmonella enteritidis drug effects, Drug Resistance, Multiple, Bacterial genetics, Multilocus Sequence Typing, Microbial Sensitivity Tests, Anti-Bacterial Agents pharmacology, Serogroup, Salmonella genetics, Salmonella classification, Salmonella isolation & purification, Salmonella drug effects, Salmonella Infections microbiology, Salmonella Infections epidemiology, Virulence Factors genetics, Whole Genome Sequencing
- Abstract
Objective: To understand the serotype distribution, drug resistance and molecular characterization of invasive non-typhoid Salmonella (iNTS) in Guangdong Province from 2018 to 2022 and provide scientific evidence for the prevention and treatment of blood flow infection caused by Salmonella . Methods: Serological identification, antimicrobial susceptibility testing, multilocus sequence typing (MLST), and whole genome sequencing were performed on Salmonella isolated from blood and stool samples in Guangdong from 2018 to 2022. Simultaneously, annotated the sequencing results for drug resistance genes and virulence factors by a microbial gene annotation system. Results: The 136 iNTS strains were divided into 25 serotypes, and Salmonella enteritidis accounted for 38.24% (52/136). The OR of other iNTS serotypes were calculated with Salmonella typhimurium as the control. The OR values of Oreninburg , Rysson, and Pomona serotypes were the highest, which were 423.50, 352.92, and 211.75, respectively. The drug resistance rate of iNTS was 0.74%-66.91%, which was lower than that of non-iNTS (3.90%-77.21%). The main iNTS of drug resistance were ampicillin and tetracycline, with resistance rates of 66.91% (91/136) and 50.00% (68/136), respectively, while the resistance rates to ciprofloxacin (5.88%,8/136), ceftazidime (5.88%,8/136), gentamicin (5.13%,7/136) and cefoxitin (0.74%, 1/136) were relatively low. iNTS carried a variety of drug-resistance genes and virulence factors, but no standard virulence factor distribution has been found. MLST cluster analysis showed that iNTS was divided into 26 sequence types, and ST11 accounted for 38.24% (52/136). Conclusions: The iNTS strains in Guangdong were dominated by Salmonella enteritidis , of which three serotypes, Oreninburg, Rison , and Pomona , may be associated with a higher risk of invasive infection during 2018 to 2022 . iNTS was sensitive to clinical first-line therapeutic drugs (cephalosporins and fluoroquinolones), with highly diverse sequences and clear phylogenetic branches. ST11 was the local dominant clone group.
- Published
- 2024
- Full Text
- View/download PDF