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In this paper, we obtain the Harary index and the hyper-Wiener index of the H-generalized join of graphs and the generalized corona product of graphs. As a consequence, we deduce some of the results in (Das et al. in J. Inequal. Appl. 2013:339, 2013) and (Khalifeh et al. in Comput. Math. Appl. 56:1402–1407, 2008). Moreover, we calculate the Harary index and the hyper-Wiener index of the ideal-based zero-divisor graph of a ring. [ABSTRACT FROM AUTHOR]