14 results on '"Andrew J Buckler"'
Search Results
2. Quantitative imaging biomarkers of coronary plaque morphology: insights from EVAPORATE
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Andrew J. Buckler, Gheorghe Doros, April Kinninger, Suvasini Lakshmanan, Viet T. Le, Peter Libby, Heidi T. May, Joseph B. Muhlestein, John R. Nelson, Anna Nicolaou, Sion K. Roy, Kashif Shaikh, Chandana Shekar, John A. Tayek, Luke Zheng, Deepak L. Bhatt, and Matthew J. Budoff
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atherosclerosis ,biomarker ,plaque ,CTA ,lipidemia ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
AimsResidual cardiovascular risk persists despite statin therapy. In REDUCE-IT, icosapent ethyl (IPE) reduced total events, but the mechanisms of benefit are not fully understood. EVAPORATE evaluated the effects of IPE on plaque characteristics by coronary computed tomography angiography (CCTA). Given the conclusion that the IPE-treated patients demonstrate that plaque burden decreases has already been published in the primary study analysis, we aimed to demonstrate whether the use of an analytic technique defined and validated in histological terms could extend the primary study in terms of whether such changes could be reliably seen in less time on drug, at the individual (rather than only at the cohort) level, or both, as neither of these were established by the primary study result.Methods and ResultsEVAPORATE randomized the patients to IPE 4 g/day or placebo. Plaque morphology, including lipid-rich necrotic core (LRNC), fibrous cap thickness, and intraplaque hemorrhage (IPH), was assessed using the ElucidVivo® (Elucid Bioimaging Inc.) on CCTA. The changes in plaque morphology between the treatment groups were analyzed. A neural network to predict treatment assignment was used to infer patient representation that encodes significant morphological changes. Fifty-five patients completed the 18-month visit in EVAPORATE with interpretable images at each of the three time points. The decrease of LRNC between the patients on IPE vs. placebo at 9 months (reduction of 2 mm3 vs. an increase of 41 mm3, p = 0.008), widening at 18 months (6 mm3 vs. 58 mm3 increase, p = 0.015) were observed. While not statistically significant on a univariable basis, reductions in wall thickness and increases in cap thickness motivated multivariable modeling on an individual patient basis. The per-patient response assessment was possible using a multivariable model of lipid-rich phenotype at the 9-month follow-up, p
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- 2023
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3. Improved Risk Prediction From Image Analysis of Computed Tomography and Transcriptional Profiling of Carotid Plaques
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Eva Karlöf, Andrew J. Buckler, Mariette Lengquist, Håkan Almqvist, Malin Kronqvist, Lars Maegdefessel, Ljubica Perisic Matic, and Ulf Hedin
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Diseases of the circulatory (Cardiovascular) system ,RC666-701 ,Surgery ,RD1-811 - Published
- 2020
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4. Proteoglycan 4 Modulates Osteogenic Smooth Muscle Cell Differentiation during Vascular Remodeling and Intimal Calcification
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Till Seime, Asim Cengiz Akbulut, Moritz Lindquist Liljeqvist, Antti Siika, Hong Jin, Greg Winski, Rick H. van Gorp, Eva Karlöf, Mariette Lengquist, Andrew J. Buckler, Malin Kronqvist, Olivia J. Waring, Jan H. N. Lindeman, Erik A. L. Biessen, Lars Maegdefessel, Anton Razuvaev, Leon J. Schurgers, Ulf Hedin, and Ljubica Matic
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Proteoglycan 4 ,smooth muscle cells ,atherosclerosis ,extracellular matrix ,vascular remodeling ,calcification ,Cytology ,QH573-671 - Abstract
Calcification is a prominent feature of late-stage atherosclerosis, but the mechanisms driving this process are unclear. Using a biobank of carotid endarterectomies, we recently showed that Proteoglycan 4 (PRG4) is a key molecular signature of calcified plaques, expressed in smooth muscle cell (SMC) rich regions. Here, we aimed to unravel the PRG4 role in vascular remodeling and intimal calcification. PRG4 expression in human carotid endarterectomies correlated with calcification assessed by preoperative computed tomographies. PRG4 localized to SMCs in early intimal thickening, while in advanced lesions it was found in the extracellular matrix, surrounding macro-calcifications. In experimental models, Prg4 was upregulated in SMCs from partially ligated ApoE−/− mice and rat carotid intimal hyperplasia, correlating with osteogenic markers and TGFb1. Furthermore, PRG4 was enriched in cells positive for chondrogenic marker SOX9 and around plaque calcifications in ApoE−/− mice on warfarin. In vitro, PRG4 was induced in SMCs by IFNg, TGFb1 and calcifying medium, while SMC markers were repressed under calcifying conditions. Silencing experiments showed that PRG4 expression was driven by transcription factors SMAD3 and SOX9. Functionally, the addition of recombinant human PRG4 increased ectopic SMC calcification, while arresting cell migration and proliferation. Mechanistically, it suppressed endogenous PRG4, SMAD3 and SOX9, and restored SMC markers’ expression. PRG4 modulates SMC function and osteogenic phenotype during intimal remodeling and macro-calcification in response to TGFb1 signaling, SMAD3 and SOX9 activation. The effects of PRG4 on SMC phenotype and calcification suggest its role in atherosclerotic plaque stability, warranting further investigations.
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- 2021
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5. Determining the Variability of Lesion Size Measurements from CT Patient Data Sets Acquired under 'No Change' Conditions
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Michael F. McNitt-Gray, Grace Hyun Kim, Binsheng Zhao, Lawrence H. Schwartz, David Clunie, Kristin Cohen, Nicholas Petrick, Charles Fenimore, Z.Q. John Lu, and Andrew J. Buckler
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
PURPOSE: To determine the variability of lesion size measurements in computed tomography data sets of patients imaged under a “no change” (“coffee break”) condition and to determine the impact of two reading paradigms on measurement variability. METHOD AND MATERIALS: Using data sets from 32 non-small cell lung cancer patients scanned twice within 15 minutes (“no change”), measurements were performed by five radiologists in two phases: (1) independent reading of each computed tomography dataset (timepoint): (2) a locked, sequential reading of datasets. Readers performed measurements using several sizing methods, including one-dimensional (1D) longest in-slice dimension and 3D semi-automated segmented volume. Change in size was estimated by comparing measurements performed on both timepoints for the same lesion, for each reader and each measurement method. For each reading paradigm, results were pooled across lesions, across readers, and across both readers and lesions, for each measurement method. RESULTS: The mean percent difference (±SD) when pooled across both readers and lesions for 1D and 3D measurements extracted from contours was 2.8 ± 22.2% and 23.4 ± 105.0%, respectively, for the independent reads. For the locked, sequential reads, the mean percent differences (±SD) reduced to 2.52 ± 14.2% and 7.4 ± 44.2% for the 1D and 3D measurements, respectively. CONCLUSION: Even under a “no change” condition between scans, there is variation in lesion size measurements due to repeat scans and variations in reader, lesion, and measurement method. This variation is reduced when using a locked, sequential reading paradigm compared to an independent reading paradigm.
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- 2015
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6. Automated plaque analysis for the prognostication of major adverse cardiac events
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Taylor M. Duguay, Svetlana Egorova, Rozemarijn Vliegenthart, Matthijs Oudkerk, H. Todd Hudson, Kjell Johnson, U. Joseph Schoepf, Marly van Assen, Samantha St. Pierre, Andrew J. Buckler, Akos Varga-Szemes, Beatrice M. Zaki, Basic and Translational Research and Imaging Methodology Development in Groningen (BRIDGE), and Cardiovascular Centre (CVC)
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Male ,Computed Tomography Angiography ,COMPUTED-TOMOGRAPHY ANGIOGRAPHY ,Prognostication ,medicine.disease_cause ,Logistic regression ,Coronary Angiography ,Severity of Illness Index ,Coronary artery disease ,030218 nuclear medicine & medical imaging ,0302 clinical medicine ,Risk Factors ,ARTERY-DISEASE ,Computed tomography ,CORONARY CT ANGIOGRAPHY ,Computed tomography angiography ,medicine.diagnostic_test ,SHEAR-STRESS ,Area under the curve ,General Medicine ,Automated analysis ,ASSOCIATION ,Middle Aged ,Prognosis ,Plaque, Atherosclerotic ,030220 oncology & carcinogenesis ,Area Under Curve ,Cardiology ,Female ,ATHEROSCLEROTIC PLAQUE ,Algorithms ,medicine.medical_specialty ,MACE ,Discriminatory power ,03 medical and health sciences ,VULNERABLE PLAQUE ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Retrospective Studies ,business.industry ,Plaque analysis ,medicine.disease ,Vulnerable plaque ,Stenosis ,HIGH-RISK ,ENDOTHELIAL DYSFUNCTION ,business ,CAROTID-ARTERY ,Mace - Abstract
Objective: The purpose of this study is to assess the value of an automated model-based plaque characterization tool for the prediction of major adverse cardiac events (MACE).Methods: We retrospectively included 45 patients with suspected coronary artery disease of which 16 (33%) experienced MACE within 12 months. Commercially available plaque quantification software was used to automatically extract quantitative plaque morphology: lumen area, wall area, stenosis percentage, wall thickness, plaque burden, remodeling ratio, calcified area, lipid rich necrotic core (LRNC) area and matrix area. The measurements were performed at all cross sections, spaced at 0.5 mm, based on fully 3D segmentations of lumen, wall, and each tissue type. Discriminatory power of these markers and traditional risk factors for predicting MACE were assessed.Results: Regression analysis using clinical risk factors only resulted in a prognostic accuracy of 63% with a corresponding area under the curve (AUC) of 0.587. Based on our plaque morphology analysis, minimal cap thickness, lesion length, LRNC volume, maximal wall area/thickness, the remodeling ratio, and the calcium volume were included into our prognostic model as parameters. The use of morphologic features alone resulted in an increased accuracy of 77% with an AUC of 0.94. Combining both clinical risk factors and morphological features in a multivariate logistic regression analysis increased the accuracy to 87% with a similar AUC of 0.924.Conclusion: An automated model based algorithm to evaluate CCTA-derived plaque features and quantify morphological features of atherosclerotic plaque increases the ability for MACE prognostication significantly compared to the use of clinical risk factors alone.
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- 2019
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7. Roadmap Consensus on Carotid Artery Plaque Imaging and Impact on Therapy Strategies and Guidelines: An International, Multispecialty, Expert Review and Position Statement
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Gert J. de Borst, G. Lanzino, Qi Yang, Tobias Saam, David J. Mikulis, Ulf Hedin, T. S. Hatsukami, Andrew J. Buckler, Myriam Edjlali, Joanna M. Wardlaw, Bruce A. Wasserman, Christopher P. Hess, ME Marianne Eline Kooi, Mauricio Castillo, Chun Yuan, Martin M. Brown, Ross Naylor, Waleed Brinjikji, Ajay Gupta, Jie Sun, Peter M. Rothwell, J. D. Spence, J. V. Goethem, Jonathan H. Gillard, J. K. DeMarco, D. Capodanno, Brajesh K. Lal, Alan R. Moody, Laura Saba, Aad van der Lugt, David Saloner, Niranjan Balu, and Max Wintermark
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Position statement ,Carotid Artery Diseases ,Aging ,medicine.medical_specialty ,STATIN THERAPY ,Consensus ,VASCULAR-SURGERY GUIDELINES ,medicine.medical_treatment ,Clinical Sciences ,Cardiovascular ,ATHEROSCLEROTIC LESIONS ,Clinical Research ,medicine ,INTRAPLAQUE HEMORRHAGE ,HISTOLOGICAL CLASSIFICATION ,Humans ,Radiology, Nuclear Medicine and imaging ,In patient ,Carotid Stenosis ,Intensive care medicine ,Stroke ,Biology ,Extracranial Vascular ,SUDDEN CORONARY DEATH ,Plaque ,Atherosclerotic ,Endarterectomy ,Computer. Automation ,ENDARTERECTOMY ,business.industry ,Neurosciences ,Health Services ,UPDATED SOCIETY ,Atherosclerosis ,medicine.disease ,Plaque, Atherosclerotic ,Nuclear Medicine & Medical Imaging ,Stenosis ,Carotid artery plaque ,Carotid Arteries ,Plaque imaging ,Patient Safety ,Neurology (clinical) ,Human medicine ,business ,Relevant information ,HIGH-RESOLUTION - Abstract
Current guidelines for primary and secondary prevention of stroke in patients with carotid atherosclerosis are based on the quantification of the degree of stenosis and symptom status. Recent publications have demonstrated that plaque morphology and composition, independent of the degree of stenosis, are important in the risk stratification of carotid atherosclerotic disease. This finding raises the question as to whether current guidelines are adequate or if they should be updated with new evidence, including imaging for plaque phenotyping, risk stratification, and clinical decision-making in addition to the degree of stenosis. To further this discussion, this roadmap consensus article defines the limits of luminal imaging and highlights the current evidence supporting the role of plaque imaging. Furthermore, we identify gaps in current knowledge and suggest steps to generate high-quality evidence, to add relevant information to guidelines currently based on the quantification of stenosis.
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- 2021
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8. Plaque imaging volume analysis: technique and application
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Antonella Balestrieri, Alessandro Murgia, Andrew J. Buckler, Maurizio Conti, Pierleone Lucatelli, Jasjit S. Suri, Elisa Scapin, Gavino Faa, Luca Saba, Marco Francone, Giulio Micheletti, Alessandro Carriero, and Giuseppe Guglielmi
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medicine.medical_specialty ,carotid atherosclerosis ,Volume analysis ,medicine.disease_cause ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,computed tomography angiography ,imaging biomarkers ,volumetric analysis ,vulnerable plaque ,Internal medicine ,medicine ,cardiovascular diseases ,Myocardial infarction ,Stroke ,Computed tomography angiography ,medicine.diagnostic_test ,business.industry ,Ischemic strokes ,Review Article on Advanced Imaging in The Diagnosis of Cardiovascular Diseases ,medicine.disease ,Vulnerable plaque ,Stenosis ,Cardiology ,Plaque imaging ,Cardiology and Cardiovascular Medicine ,business ,030217 neurology & neurosurgery - Abstract
The prevention and management of atherosclerosis poses a tough challenge to public health organizations worldwide. Together with myocardial infarction, stroke represents its main manifestation, with up to 25% of all ischemic strokes being caused by thromboembolism arising from the carotid arteries. Therefore, a vast number of publications have focused on the characterization of the culprit lesion, the atherosclerotic plaque. A paradigm shift appears to be taking place at the current state of research, as the attention is gradually moving from the classically defined degree of stenosis to the identification of features of plaque vulnerability, which appear to be more reliable predictors of recurrent cerebrovascular events. The present review will offer a perspective on the present state of research in the field of carotid atherosclerotic disease, focusing on the imaging modalities currently used in the study of the carotid plaque and the impact that such diagnostic means are having in the clinical setting.
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- 2020
9. Atherosclerotic Plaque Tissue: Noninvasive Quantitative Assessment of Characteristics with Software-aided Measurements from Conventional CT Angiography
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Michael Rosol, James C. Keith, Samantha St. Pierre, Xiaonan Ma, Malachi Sheahan, William P. Newman, Guenevere Rae, Nancy A. Obuchowski, Eric S. Perlman, David S. Paik, and Andrew J. Buckler
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Adult ,Male ,medicine.medical_specialty ,Computed Tomography Angiography ,030204 cardiovascular system & hematology ,03 medical and health sciences ,0302 clinical medicine ,Software ,Quantitative assessment ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Carotid Stenosis ,Diagnosis, Computer-Assisted ,Vascular Calcification ,Vascular calcification ,Computed tomography angiography ,Original Research ,Aged ,Aged, 80 and over ,Observer Variation ,medicine.diagnostic_test ,Extramural ,business.industry ,Middle Aged ,Plaque, Atherosclerotic ,Angiography ,Female ,Radiology ,business ,Observer variation ,030217 neurology & neurosurgery ,Plaque Tissue ,Algorithms - Abstract
Purpose To (a) evaluate whether plaque tissue characteristics determined with conventional computed tomographic (CT) angiography could be quantitated at higher levels of accuracy by using image processing algorithms that take characteristics of the image formation process coupled with biologic insights on tissue distributions into account by comparing in vivo results and ex vivo histologic findings and (b) assess reader variability. Materials and Methods Thirty-one consecutive patients aged 43-85 years (average age, 64 years) known to have or suspected of having atherosclerosis who underwent CT angiography and were referred for endarterectomy were enrolled. Surgical specimens were evaluated with histopathologic examination to serve as standard of reference. Two readers used lumen boundary to determine scanner blur and then optimized component densities and subvoxel boundaries to best fit the observed image by using semiautomatic software. The accuracy of the resulting in vivo quantitation of calcification, lipid-rich necrotic core (LRNC), and matrix was assessed with statistical estimates of bias and linearity relative to ex vivo histologic findings. Reader variability was assessed with statistical estimates of repeatability and reproducibility. Results A total of 239 cross sections obtained with CT angiography and histologic examination were matched. Performance on held-out data showed low levels of bias and high Pearson correlation coefficients for calcification (-0.096 mm
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- 2017
10. Quantitative Imaging Test Approval and Biomarker Qualification: Interrelated but Distinct Activities
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Lawrence H. Schwartz, Lisa Karam, Claus Bendtsen, Bernard Bendriem, Ronald Boellaard, Maryellen L. Giger, Gary S. Dorfman, Edward F. Jackson, Willy Eidsaunet, Brian Zimmerman, Mark A. Rosen, David E. Gustafson, Barry A. Siegel, Patricia E. Cole, Walter Wolf, Cathy Elsinger, Pamela S. Douglas, Haren Rupani, N. Reed Dunnick, Gary J. Kelloff, Geoffrey McLennan, Colin G Miller, Gudrun Zahlmann, Rick Patt, Sandeep N. Gupta, Richard L. Wahl, Keith E. Muller, Otto S. Hoekstra, James J Conklin, Andrew J. Buckler, David Raunig, John C. Waterton, Richard Frank, Hugo J.W.L. Aerts, John M. Boone, A. Gregory Sorensen, Daniel C. Sullivan, P. David Mozley, Constantine Gatsonis, Paul E. Kinahan, Linda B. Bresolin, Radiology and nuclear medicine, CCA - Disease profiling, Radiotherapie, and RS: GROW - School for Oncology and Reproduction
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Diagnostic Imaging ,Pathology ,medicine.medical_specialty ,Biomedical Research ,Technology Assessment, Biomedical ,Process management ,Quantitative imaging ,Device Approval ,Conflict of Interest ,United States Food and Drug Administration ,business.industry ,United States ,Test (assessment) ,Europe ,Predictive Value of Tests ,Humans ,Medicine ,Biomarker (medicine) ,Radiology, Nuclear Medicine and imaging ,Diffusion of Innovation ,business ,Biomarkers ,Original Research - Abstract
Quantitative imaging biomarkers could speed the development of new treatments for unmet medical needs and improve routine clinical care. However, it is not clear how the various regulatory and nonregulatory (eg, reimbursement) processes (often referred to as pathways) relate, nor is it clear which data need to be collected to support these different pathways most efficiently, given the time- and cost-intensive nature of doing so. The purpose of this article is to describe current thinking regarding these pathways emerging from diverse stakeholders interested and active in the definition, validation, and qualification of quantitative imaging biomarkers and to propose processes to facilitate the development and use of quantitative imaging biomarkers. A flexible framework is described that may be adapted for each imaging application, providing mechanisms that can be used to develop, assess, and evaluate relevant biomarkers. From this framework, processes can be mapped that would be applicable to both imaging product development and to quantitative imaging biomarker development aimed at increasing the effectiveness and availability of quantitative imaging.http://radiology.rsna.org/lookup/suppl/doi:10.1148/radiol.10100800/-/DC1.RSNA, 2011
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- 2011
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11. Statistical Issues in Testing Conformance with the Quantitative Imaging Biomarker Alliance (QIBA) Profile Claims
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Jennifer Bullen, Andrew J. Buckler, Paul E. Kinahan, Nancy A. Obuchowski, Huiman X. Barnhart, Nicholas Petrick, Daniel P. Barboriak, H. Heather Chen-Mayer, and Daniel C. Sullivan
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Research design ,Diagnostic Imaging ,Lung Neoplasms ,Process (engineering) ,Computer science ,media_common.quotation_subject ,computer.software_genre ,01 natural sciences ,Conformity ,Article ,030218 nuclear medicine & medical imaging ,010104 statistics & probability ,03 medical and health sciences ,0302 clinical medicine ,Statistical Analysis Plan ,Software ,Medical imaging ,Humans ,Radiology, Nuclear Medicine and imaging ,0101 mathematics ,media_common ,Emphysema ,business.industry ,Clinical study design ,Magnetic Resonance Imaging ,Risk analysis (engineering) ,Research Design ,Biomarker (medicine) ,Data mining ,business ,Tomography, X-Ray Computed ,computer ,Biomarkers - Abstract
A major initiative of the Quantitative Imaging Biomarker Alliance (QIBA) is to develop standards-based documents called “Profiles”, which describe one or more technical performance claims for a given imaging modality. The term “actor” denotes any entity (device, software, person) whose performance must meet certain specifications in order for the claim to be met. The objective of this paper is to present the statistical issues in testing actors’ conformance with the specifications. In particular, we present the general rationale and interpretation of the claims, the minimum requirements for testing whether an actor achieves the performance requirements, the study designs used for testing conformity, and the statistical analysis plan. We use three examples to illustrate the process: apparent diffusion coefficient (ADC) in solid tumors measured by MRI, change in Perc 15 as a biomarker for the progression of emphysema, and percent change in solid tumor volume by CT as a biomarker for lung cancer progression.
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- 2016
12. Algorithm variability in the estimation of lung nodule volume from phantom CT scans: Results of the QIBA 3A public challenge
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Nancy A. Obuchowski, Emilio Vega, Gregory V. Goldmacher, Maria Athelogou, Hitoshi Yamagata, Rudresh Jarecha, Binsheng Zhao, Guillaume Orieux, Michael C. Bloom, Ninad Mantri, Luduan Zhang, Hyun J. Kim, Marios A. Gavrielides, Grzegorz Soza, Osama Masoud, Dirk Colditz Colditz, Yuhua Gu, Hubert Beaumont, Andrew J. Buckler, Ganesh Saiprasad, Jan Martin Kuhnigk, Adele P. Peskin, Robert J. Gillies, Jan Hendrik Moltz, Sam Peterson, Alden A. Dima, Nicholas Petrick, Estanislao Oubel, Tomoyuki Takeguchi, Yongqiang Tan, Christian Tietjen, and Publica
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medicine.medical_specialty ,Lung Neoplasms ,Computer science ,Article ,Imaging phantom ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Image Processing, Computer-Assisted ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Lung ,Reproducibility ,Tumor size ,Phantoms, Imaging ,business.industry ,Reproducibility of Results ,Solitary Pulmonary Nodule ,Nodule (medicine) ,Repeatability ,Tumor Burden ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Lung tumor ,Radiology ,medicine.symptom ,Tomography, X-Ray Computed ,Nuclear medicine ,business ,Algorithm ,Algorithms ,Volume (compression) - Abstract
Rationale and Objectives Quantifying changes in lung tumor volume is important for diagnosis, therapy planning, and evaluation of response to therapy. The aim of this study was to assess the performance of multiple algorithms on a reference data set. The study was organized by the Quantitative Imaging Biomarker Alliance (QIBA). Materials and Methods The study was organized as a public challenge. Computed tomography scans of synthetic lung tumors in an anthropomorphic phantom were acquired by the Food and Drug Administration. Tumors varied in size, shape, and radiodensity. Participants applied their own semi-automated volume estimation algorithms that either did not allow or allowed post-segmentation correction (type 1 or 2, respectively). Statistical analysis of accuracy (percent bias) and precision (repeatability and reproducibility) was conducted across algorithms, as well as across nodule characteristics, slice thickness, and algorithm type. Results Eighty-four percent of volume measurements of QIBA-compliant tumors were within 15% of the true volume, ranging from 66% to 93% across algorithms, compared to 61% of volume measurements for all tumors (ranging from 37% to 84%). Algorithm type did not affect bias substantially; however, it was an important factor in measurement precision. Algorithm precision was notably better as tumor size increased, worse for irregularly shaped tumors, and on the average better for type 1 algorithms. Over all nodules meeting the QIBA Profile, precision, as measured by the repeatability coefficient, was 9.0% compared to 18.4% overall. Conclusion The results achieved in this study, using a heterogeneous set of measurement algorithms, support QIBA quantitative performance claims in terms of volume measurement repeatability for nodules meeting the QIBA Profile criteria.
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- 2016
13. Spatio-temporal texture (SpTeT) for distinguishing vulnerable from stable atherosclerotic plaque on dynamic contrast enhancement (DCE) MRI in a rabbit model
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Ning Hua, Tuan D. Pham, Anant Madabhushi, Jovanna Danagoulian, James A. Hamilton, Andrew J. Buckler, Alkystis Phinikaridou, Tao Wan, and Ross Kleiman
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Pathology ,medicine.medical_specialty ,computer.software_genre ,Spatio-Temporal Analysis ,Image texture ,Voxel ,Intravascular ultrasound ,Medical imaging ,Image Processing, Computer-Assisted ,Medicine ,Animals ,Thrombus ,Magnetic Resonance Physics ,skin and connective tissue diseases ,Aortic atherosclerosis ,medicine.diagnostic_test ,business.industry ,Magnetic resonance imaging ,Thrombosis ,General Medicine ,Arteries ,medicine.disease ,Magnetic Resonance Imaging ,Plaque, Atherosclerotic ,Disease Models, Animal ,Feature (computer vision) ,Rabbits ,business ,computer - Abstract
Purpose: To develop a new spatio-temporal texture (SpTeT) based method for distinguishing vulnerable versus stable atherosclerotic plaques on DCE-MRI using a rabbit model of atherothrombosis. Methods: Aortic atherosclerosis was induced in 20 New Zealand White rabbits by cholesterol diet and endothelial denudation. MRI was performed before (pretrigger) and after (posttrigger) inducing plaque disruption with Russell's-viper-venom and histamine. Of the 30 vascular targets (segments) under histology analysis, 16 contained thrombus (vulnerable) and 14 did not (stable). A total of 352 voxel-wise computerized SpTeT features, including 192 Gabor, 36 Kirsch, 12 Sobel, 52 Haralick, and 60 first-order textural features, were extracted on DCE-MRI to capture subtle texture changes in the plaques over the course of contrast uptake. Different combinations of SpTeT feature sets, in which the features were ranked by a minimum-redundancy-maximum-relevance feature selection technique, were evaluated via a random forest classifier. A 500 iterative 2-fold cross validation was performed for discriminating the vulnerable atherosclerotic plaque and stable atherosclerotic plaque on per voxel basis. Four quantitative metrics were utilized to measure the classification results in separating between vulnerable and stable plaques. Results: The quantitative results show that the combination of five classes of SpTeT features can distinguish between vulnerable (disrupted plaques with an overlying thrombus) and stable plaques with the best AUC values of 0.9631 ± 0.0088, accuracy of 89.98% ± 0.57%, sensitivity of 83.71% ± 1.71%, and specificity of 94.55% ± 0.48%. Conclusions: Vulnerable and stable plaque can be distinguished by SpTeT based features. The SpTeT features, following validation on larger datasets, could be established as effective and reliable imaging biomarkers for noninvasively assessing atherosclerotic risk.
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- 2014
14. Erratum to: Quantitative Imaging Biomarker Ontology (QIBO) for Knowledge Representation of Biomedical Imaging Biomarkers
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Andrew J. Buckler, Tiffany Ting Liu, Erica Savig, Baris E. Suzek, Daniel L. Rubin, and David Paik
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Radiological and Ultrasound Technology ,Radiology, Nuclear Medicine and imaging ,Erratum ,Computer Science Applications - Published
- 2013
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