151 results on '"Braconi, C"'
Search Results
2. Investigating the feasibility of tumour molecular profiling in gastrointestinal malignancies in routine clinical practice
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Moorcraft, S.Y., Gonzalez de Castro, D., Cunningham, D., Jones, T., Walker, B.A., Peckitt, C., Yuan, L.C., Frampton, M., Begum, R., Eltahir, Z., Wotherspoon, A., Teixeira Mendes, L.S., Hulkki Wilson, S., Gillbanks, A., Baratelli, C., Fotiadis, N., Patel, A., Braconi, C., Valeri, N., Gerlinger, M., Rao, S., Watkins, D., Chau, I., and Starling, N.
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- 2018
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3. Carbon dating cancer: defining the chronology of metastatic progression in colorectal cancer
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Lote, H., Spiteri, I., Ermini, L., Vatsiou, A., Roy, A., McDonald, A., Maka, N., Balsitis, M., Bose, N., Simbolo, M., Mafficini, A., Lampis, A., Hahne, J.C., Trevisani, F., Eltahir, Z., Mentrasti, G., Findlay, C., Kalkman, E.A.J., Punta, M., Werner, B., Lise, S., Aktipis, A., Maley, C., Greaves, M., Braconi, C., White, J., Fassan, M., Scarpa, A., Sottoriva, A., and Valeri, N.
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- 2017
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4. Sorafenib for the Treatment of Advanced Hepatocellular Cancer – a UK Audit
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King, J., Palmer, D.H., Johnson, P., Ross, P., Hubner, R.A., Sumpter, K., Darby, S., Braconi, C., Iwuji, C., Swinson, D., Collins, P., Patel, K., Nobes, J., Muazzam, I., Blesing, C., Kirkwood, A., Nash, S., and Meyer, T.
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- 2017
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5. Heterogeneity of Cholangiocarcinoma immune biology
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Vita, F. (Francesca), Olaizola, I. (Irene), Amato, F. (Francesco), Rae, C. (Colin), Marco, S. (Sergi), Banales, J.M. (Jesús M.), and Braconi, C. (Chiara)
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Cancer stem cells ,Immune cells ,Advanced biliary cancer ,Dendritic cells ,Cholangiocarcinoma ,Matrix metalloproteinases ,Liver ,Tumor microenvironment ,Hepatic stellate cells ,Mesenchymal transition ,Hepatocellular-carcinoma ,Heterogeneity ,Cancer-associated fibroblasts ,Neutrophil-lymphocyte ratio ,Intrahepatic cholangiocarcinoma - Abstract
Cholangiocarcinomas (CCAs) are aggressive tumors arising along the biliary tract epithelium, whose incidence and mortality are increasing. CCAs are highly desmoplastic cancers characterized by a dense tumor microenvironment (TME), in which each single component plays a fundamental role in shaping CCA initiation, progression and resistance to therapies. The crosstalk between cancer cells and TME can affect the recruitment, infiltration and differentiation of immune cells. According to the stage of the disease and to intra- and inter-patient heterogeneity, TME may contribute to either protumoral or antitumoral activities. Therefore, a better understanding of the effect of each immune cell subtype may open the path to new personalized immune therapeutic strategies for the management of CCA. In this review, we describe the role of immune cells in CCA initiation and progression, and their crosstalk with both cancer-associated fibroblasts (CAFs) and the cancer-stem-cell-like (CSC) niche.
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- 2023
6. Prognostic role of the LCS6 KRAS variant in locally advanced rectal cancer: results of the EXPERT-C trial
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Sclafani, F., Chau, I., Cunningham, D., Peckitt, C., Lampis, A., Hahne, J.C., Braconi, C., Tabernero, J., Glimelius, B., Cervantes, A., Begum, R., Gonzalez De Castro, D., Hulkki Wilson, S., Eltahir, Z., Wotherspoon, A., Tait, D., Brown, G., Oates, J., and Valeri, N.
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- 2015
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7. microRNA-29 can regulate expression of the long non-coding RNA gene MEG3 in hepatocellular cancer
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Braconi, C, Kogure, T, Valeri, N, Huang, N, Nuovo, G, Costinean, S, Negrini, M, Miotto, E, Croce, C M, and Patel, T
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- 2011
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8. Insulin-like growth factor (IGF) 1 and 2 help to predict disease outcome in GIST patients
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Braconi, C., Bracci, R., Bearzi, I., Bianchi, F., Sabato, S., Mandolesi, A., Belvederesi, L., Cascinu, S., Valeri, N., and Cellerino, R.
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- 2008
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9. KIT and PDGFRα mutations in 104 patients with gastrointestinal stromal tumors (GISTs): a population-based study
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Braconi, C., Bracci, R., Bearzi, I., Bianchi, F., Costagliola, A., Catalani, R., Mandolesi, A., Ranaldi, R., Galizia, E., Cascinu, S., Rossi, G., Giustini, L., Latini, L., Valeri, N., and Cellerino, R.
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- 2008
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10. The impact of gender and immune system determinants on long-term survival in biliary tract cancer
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Salati M., Caputo F., Cerma K., Marcheselli L., Braconi C., Cascinu S., Salati, M., Caputo, F., Cerma, K., Marcheselli, L., Braconi, C., and Cascinu, S.
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Biliary tract cancer ,Gender differences ,Immune system determnants - Abstract
Advanced biliary tract cancers are poor prognosis tumors with limited therapeutic options. The conven-tional treatment consists of combination chemotherapy resulting in overall survival of less than 12 months. Recently, a subgroup of patients characterized by an exceedingly fa-vorable prognosis has been reported in the literature. In our study, we assessed the prevalence and provided a clinico-pathological characterization of this subset of patients in the context of daily practice. In particular, we were able to identify female sex and neutrophil-to-lymphocyte ratio as independent predictors of long-term survival. Based on these premises, we deem it necessary to prompt transla-tional research projects aimed at molecularly characterized long-term survivors, particularly focusing on sex-and im-mune-related determinants.
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- 2019
11. O-2 Phase III study of NUC-1031 + cisplatin vs gemcitabine + cisplatin for first-line treatment of patients with advanced biliary tract cancer (NuTide:121)
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Knox, J., Bazin, I., Oh, D., Zubkov, O., Breder, V., Bai, L., Christie, A., McNamara, M., Goyal, L., Cosgrove, D., Springfeld, C., Sjoquist, K., Park, J., Verdaguer, H., Braconi, C., Ross, P., de Gramont, A., Shroff, R., Zalcberg, J., Palmer, D., and Valle, J.
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- 2023
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12. Anemia may influence the outcome of patients undergoing neo-adjuvant treatment of rectal cancer
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Berardi, R., Braconi, C., Mantello, G., Scartozzi, M., Del Prete, S., Luppi, G., Martinelli, R., Fumagalli, M., Valeri, G., Bearzi, I., Marmovale, C., Grillö-Ruggieri, F., and Cascinu, S.
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- 2006
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13. Impact of Positive Lymph Nodes and Resection Margin Status on the Overall Survival of Resected Perihilar Cholangiocarcinoma, the ENS-CCA Registry
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Nooijen, L.E., Bañales, J., de Boer, M.T., Braconi, C., Folseraas, T., Forner, A., Holowko, W., Hoogwater, F.J.H., Klümpen, H.-J., Groot-Koerkamp, B., Lamarca, A., Landa-Magdalena, A., López-López, F., Sánchez, L. Izquierdo, Scheiter, A., Utpatel, K., Swijnenburg, R.-J., and Erdmann, J.I.
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- 2022
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14. 59TiP Phase III study of NUC-1031 + cisplatin vs gemcitabine + cisplatin for first-line treatment of patients with advanced biliary tract cancer (NuTide:121)
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Knox, J., McNamara, M.G., Goyal, L., Cosgrove, D., Springfeld, C., Sjoquist, K., Park, J.O., Verdaguer, H., Braconi, C., Ross, P., Oh, D-Y., De Gramont, A., Shroff, R.T., Zalcberg, J.R., Palmer, D., and Valle, J.W.
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- 2021
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15. MicroRNAs as predictive biomarkers of chronic kidney disease (CKD) in patients (pts) undergoing radical nephrectomy (RN) for kidney cancer
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TREVISANI F, GHIDINI M, HAHNE J, LAMPIS A, SCIARRONE ALIBRANDI MT, ZAGATO L, CITTERIO L, DELL’ANTONIO G, MONTORSI, FRANCESCO, BERTINI R, SALONIA, ANDREA, BRIGANTI A, BENIGNI F, CARENZI C, CAPASSO G, RUGGE M, FASSAN M, RIGOTTI M, CASCIONE L, BRACONI C, VALERI N., MANUNTA , PAOLO, Trevisani, F, Ghidini, M, Hahne, J, Lampis, A, Manunta, Paolo, SCIARRONE ALIBRANDI, Mt, Zagato, L, Citterio, L, Dell’Antonio, G, Montorsi, Francesco, Bertini, R, Salonia, Andrea, Briganti, A, Benigni, F, Carenzi, C, Capasso, G, Rugge, M, Fassan, M, Rigotti, M, Cascione, L, Braconi, C, and Valeri, N.
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- 2015
16. 80TiP Global phase III study of NUC-1031 plus cisplatin vs gemcitabine plus cisplatin for first-line treatment of patients with advanced biliary tract cancer (NuTide:121)
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Knox, J.J., McNamara, M.G., Goyal, L., Doherty, M., Cosgrove, D., Springfeld, C., Sjoquist, K., Park, J.O., Verdaguer, H., Braconi, C., Ross, P., De Gramont, A., Zalcberg, J.R., Palmer, D., and Valle, J.W.
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- 2020
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17. 14P - Modulation of pancreatic cancer cell sensitivity to FOLFIRINOX through microRNA-mediated regulation of response to DNA damage
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Lampis, A., Carotenuto, P., Hedayat, S., Previdi, M.C., Zito, D., Sclafani, F., Parisi, C., Hahne, J.C., Hallsworth, A., Kirkin, V., Young, K., Kouvelakis, K., Azevedo, S.X., Vasiliki, M., Scarpa, A., Cunningham, D., Chau, I., Valeri, N., Fassan, M., and Braconi, C.
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- 2019
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18. 1953P - Detection of microRNAs as biomarker for anti-EGFR antibody resistance in colon cancer patients
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Hahne, J.C., Lampis, A., Ghidini, M., Ratti, M., Salati, M., Senti, C., Passalacqua, R., Cascione, L., Braconi, C., Sansom, O.J., Fassan, M., and Valeri, N.
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- 2019
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19. 731P - Liver metastases (LM) from intrahepatic cholangiocarcinoma (iCCA): Outcomes from the European Network for the study of cholangiocarcinoma (ENS-CCA) registry and implications on current American Joint Committee on Cancer (AJCC) staging
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Lamarca, A., Santos, A., Utpatel, K., La Casta, A., Stock, S., Forner, A., Adeva Alfonso, J., Folseraas, T., Fabris, L., Macias, R., Krawczyk, M., Cardinale, V., Braconi, C., Alvaro, D., Evert, M., Bañales, J., and Valle, J.W.
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- 2019
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20. PD-003 - Identification of a nanostring signature that differentiates early pancreatic cancers according to stromal composition and predicts clinical outcome
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Sclafani, F., Cascione, L., Cunningham, D., Young, K., Carotenuto, P., Fassan, M., Salati, M., Lanese, A., Berenguer Pina, J., Kouvelakis, K., Vendrell, I., Said-Huntingford, I., Previdi, M., Begum, R., Gillbanks, A., Hedayat, S., Sadanandam, A., Lampis, A., Hahne, J., Valeri, N., Chau, I., and Braconi, C.
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- 2019
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21. 116P - Clinical and pre-clinical biomarkers of Regorafenib (REG) efficacy in metastatic colorectal cancer (mCRC) in a phase II trial
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Khan, K., Cunningham, D., Vlachogiannis, G., Hedayat, S., Rata, M., Koh, D-M., Tunariu, N., Jamin, Y., Collins, D., Chau, I., Rao, S., Watkins, D., Starling, N., Peckitt, C., Fotiadis, N., Saffery, C., Hahne, J., Fassan, M., Braconi, C., and Valeri, N.
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- 2017
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22. Capecitabine and mitomycin C may be an effective treatment option for third-line chemotherapy in advanced colorectal cancer
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Scartozzi, M., Falcone, A., Pucci, F., Braconi, C., Pierantoni, C., Cavanna, L., Franciosi, V., Berardi, R., Beretta, G., Masi, G., Allegrini, G., Zaniboni, A., Roberto Labianca, and Cascinu, S.
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- 2006
23. 1595P - MicroRNAs as biomarkers of resistance to HER2 inhibitors in combination with chemotherapy in gastro-oesophageal cancer cell lines
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Lote, H., Zito, D., Burke, R., Smyth, E., Braconi, C., Cunningham, D., and Valeri, N.
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- 2016
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24. 694P - Prognostic value of the immune-related transcriptome in biliary tract cancers
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Ghidini, M., Cascione, L., Lampis, A., Pandolfo, R., Carotenuto, P., Trevisani, F., Hahne, J.C., Zito, D., Guzzardo, V., Zerbi, A., Torzilli, G., Roncalli, M., Rimassa, L., Santoro, A., Fassan, M., Valeri, N., and Braconi, C.
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- 2016
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25. 638P - Investigating the feasibility of precision medicine in gastrointestinal cancers
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Moorcraft, S.Y., Gonzalez De Castro, D., Cunningham, D., Walker, B., Jones, T., Peckitt, C., Wilson, S. Hulkki, Wotherspoon, A., Te Mendes, L. Sixeira, Begum, R., Eltahir, Z., Yuan, L., Gillbanks, A., Baratelli, C., Valeri, N., Gerlinger, M., Braconi, C., Chau, I., Watkins, D., and Starling, N.
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- 2016
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26. 525P - KRAS mutations in circulating tumour DNA (ctDNA) in MRI-defined, high-risk, locally-advanced rectal cancer (LARC) patients (pts) from the EXPERT-C trial
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Sclafani, F., Chau, I., Cunningham, D., Vlachogiannis, G., Eltahir, Z., Lampis, A., Braconi, C., Kalaitzaki, E., De Castro, D. Gonzalez, Wotherspoon, A., Capdevila, J., Glimelius, B., Cervantes, A., Begum, R., Lote, H., Mentrasti, G., Hahne, J.C., Tait, D., Brown, G., and Valeri, N.
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- 2016
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27. FRI-039 - HSP-90 Inhibition is a Promising Therapeutic Strategy in Cholangiocarcinoma and MIR-21 may Serve as a Biomarker of Sensitivity
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Lampis, A., Cascione, L., Burke, R., Clarke, P., Simbolo, M., Scarpa, A., Bosma, E., Yu, S., Cole, R., Stubbs, M., Sharp, S., van Montfort, R., Hahne, J., Fassan, M., Workman, P., Valeri, N., and Braconi, C.
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- 2016
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28. I gessi in odontoiatria
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Procaccini, M, Braconi, C, Capogreco, Mario, Baldoni, E, and Passagrilli, B.
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- 1990
29. Funzione ed estetica in protesi fissa (parte seconda)
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Capogreco, Mario, Baldoni, E, Braconi, C, and Romano, P.
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- 1990
30. Assessing the impact of COVID-19 on liver cancer management (CERO-19)
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Manuel Delgado, Mar Lozano, Alejandro Forner, Bruno Sangro, Alessandro Granito, Margarita Sala, Monica Ronzoni, Giuseppe Cabibbo, Frederik J H Hoogwater, José Luis Lledó, Rosanna Villani, Alessandra Elvevi, Lorenza Rimassa, Juan Acevedo, Mariona Calvo, Mercedes Vergara, Sergio Muñoz-Martínez, Jean-Charles Nault, Juan C. Bandi, Markus Peck-Radosavljevic, Brandon M. Meyers, Marco Sanduzzi-Zamparelli, Rogerio Alves, Saleh A. Alqahtani, Alberto E. Muñoz, Sonia Pascual, Alberto Lué, Josepmaria Argemi, Beatriz Minguez, Henning Wege, Giovan Giuseppe Di Costanzo, David J. Pinato, Victor Sapena, Maria Guarino, Stefano Okolicsanyi, Vivianne Mello, Martina Gambato, Susanna Coll, Carlos Benítez, Dhanny Gomez, Christoph Roderburg, Peter R. Galle, Bristi Basu, Federico Piñero, Cassia Leal, Frank Tacke, Christie Perelló, Tudor Mocan, Massimiliano Salati, Helen L. Reeves, Jörg Trojan, Vincenzo Cardinale, Mohamed El Kassas, Tom Lüdde, John Bridgewater, Mário Reis Álvares-da-Silva, Anja Lachenmayer, Giovanni Brandi, Alex Vianey Callado França, Mohamed Bouattour, Tim Meyer, Gerda Elisabeth Villadsen, M. Varela, Jordi Bruix, Dalia Morales-Arraez, Carlos Rodríguez-Lope, Christian Toso, Wacław Hołówko, Philippe Merle, Manuel Romero-Gómez, Ignacio García-Juárez, Fernanda Branco, Gonzalo Sapisochin, Chiara Braconi, Emmanouil Giorgakis, Hidenori Toyoda, Lorraine Blaise, Ana María Matilla Peña, Andrea Casadei-Gardini, Leonardo G Da Fonseca, Alexander Siebenhüner, Maria Reig, Gustavo Pereira, Massimo Iavarone, Maria Margarita Anders, Munoz-Martinez S., Sapena V., Forner A., Nault J.-C., Sapisochin G., Rimassa L., Sangro B., Bruix J., Sanduzzi-Zamparelli M., Holowko W., El Kassas M., Mocan T., Bouattour M., Merle P., Hoogwater F.J.H., Alqahtani S.A., Reeves H.L., Pinato D.J., Giorgakis E., Meyer T., Villadsen G.E., Wege H., Salati M., Minguez B., Di Costanzo G.G., Roderburg C., Tacke F., Varela M., Galle P.R., Alvares-da-Silva M.R., Trojan J., Bridgewater J., Cabibbo G., Toso C., Lachenmayer A., Casadei-Gardini A., Toyoda H., Ludde T., Villani R., Matilla Pena A.M., Guedes Leal C.R., Ronzoni M., Delgado M., Perello C., Pascual S., Lledo J.L., Argemi J., Basu B., da Fonseca L., Acevedo J., Siebenhuner A.R., Braconi C., Meyers B.M., Granito A., Sala M., Rodriguez-Lope C., Blaise L., Romero-Gomez M., Pinero F., Gomez D., Mello V., Pinheiro Alves R.C., Franca A., Branco F., Brandi G., Pereira G., Coll S., Guarino M., Benitez C., Anders M.M., Bandi J.C., Vergara M., Calvo M., Peck-Radosavljevic M., Garcia-Juarez I., Cardinale V., Lozano M., Gambato M., Okolicsanyi S., Morales-Arraez D., Elvevi A., Munoz A.E., Lue A., Iavarone M., Reig M., Basu, Bristi [0000-0002-3562-2868], Apollo - University of Cambridge Repository, Institut Català de la Salut, [Muñoz-Martínez S, Sapena V, Forner A] BCLC group, Liver Unit, Hospital Clinic Barcelona, IDIBAPS, CIBERehd, University of Barcelona, Barcelona, Spain. [Nault JC] Service d’hépatologie, Hôpital Avicenne, Hôpitaux Universitaires Paris-Seine-Saint-Denis, Assistance-Publique Hôpitaux de Paris, Bobigny, France. Unité de Formation et de Recherche Santé Médecine et Biologie Humaine, Université Paris Nord, Paris, France. Centre de Recherche des Cordeliers, Inserm, Sorbonne Université, Université Paris, INSERM UMR 1138 Functional Genomics of Solid Tumors Laboratory, Paris, France. [Sapisochin G] Abdominal Transplant & HPB Surgical Oncology, University Health Network, Toronto General Hospital, University of Toronto, Toronto, Canada. [Rimassa L] Medical Oncology and Hematology Unit, Humanitas Cancer Center, Humanitas Clinical and Research Center – IRCCS, Rozzano, Milan, Italy. Department of Biomedical Sciences, Humanitas University, Milan, Italy. [Mínguez B] Unitat del Fetge, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Grup de Recerca en Malalties hepàtiques, Vall d'Hebron Institut de Recerca (VHIR), Barcelona, Spain. Universitat Autònoma de Barcelona, Bellaterra, Spain, and Vall d'Hebron Barcelona Hospital Campus
- Subjects
Hepatocellular carcinoma ,LC ,medicine.medical_treatment ,diagnóstico::toma de decisiones clínicas [TÉCNICAS Y EQUIPOS ANALÍTICOS, DIAGNÓSTICOS Y TERAPÉUTICOS] ,Nurses ,RC799-869 ,Liver transplantation ,Cholangiocarcinoma ,Clinical trials ,ENS-CCA ,Interquartile range ,Decisió, Presa de ,Pandemic ,Other subheadings::/diagnosis [Other subheadings] ,virosis::infecciones por virus ARN::infecciones por Nidovirales::infecciones por Coronaviridae::infecciones por Coronavirus [ENFERMEDADES] ,CERO-19 ,Pandèmia de COVID-19, 2020 ,Immunology and Allergy ,iCCA, intrahepatic cholangiocarcinoma ,COVID-19, coronavirus disease 2019 ,Liver Cancer Outcome in the COVID-19-pandemic Project ,Settore MED/12 - Gastroenterologia ,ddc:617 ,IQR ,Gastroenterology ,BCLC, Barcelona Clinic Liver Cancer ,Virus Diseases::RNA Virus Infections::Nidovirales Infections::Coronaviridae Infections::Coronavirus Infections [DISEASES] ,neoplasias::neoplasias por localización::neoplasias del sistema digestivo::neoplasias hepáticas [ENFERMEDADES] ,Diseases of the digestive system. Gastroenterology ,Management ,Clinical Practice ,Clinical trial ,European Network for the Study of Cholangiocarcinoma ,Diagnosis::Clinical Decision-Making [ANALYTICAL, DIAGNOSTIC AND THERAPEUTIC TECHNIQUES, AND EQUIPMENT] ,Fetge - Malalties - Diagnòstic ,Liver cancer ,PROGRESSION-FREE SURVIVAL ,Liver Cancer ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Otros calificadores::/diagnóstico [Otros calificadores] ,610 Medicine & health ,Neoplasms::Neoplasms by Site::Digestive System Neoplasms::Liver Neoplasms [DISEASES] ,LT, liver transplantation ,Article ,Barcelona Clinic Liver Cancer ,Internal Medicine ,medicine ,ENS-CCA, European Network for the Study of Cholangiocarcinoma ,Hepatology ,business.industry ,CERO-19, Liver Cancer Outcome in the COVID-19-pandemic Project ,COVID-19 ,IQR, Interquartile range ,medicine.disease ,BCLC ,Emergency medicine ,Observational study ,610 Medizin und Gesundheit ,business ,HCC, hepatocellular carcinoma ,LC, liver cancer ,SARS-CoV-2, severe acute respiratory syndrome coronavirus-2 - Abstract
[Background & Aims] The coronavirus disease 2019 (COVID-19) pandemic has posed unprecedented challenges to healthcare systems and it may have heavily impacted patients with liver cancer (LC). Herein, we evaluated whether the schedule of LC screening or procedures has been interrupted or delayed because of the COVID-19 pandemic., [Methods] An international survey evaluated the impact of the COVID-19 pandemic on clinical practice and clinical trials from March 2020 to June 2020, as the first phase of a multicentre, international, and observational project. The focus was on patients with hepatocellular carcinoma or intrahepatic cholangiocarcinoma, cared for around the world during the first COVID-19 pandemic wave., [Results] Ninety-one centres expressed interest to participate and 76 were included in the analysis, from Europe, South America, North America, Asia, and Africa (73.7%, 17.1%, 5.3%, 2.6%, and 1.3% per continent, respectively). Eighty-seven percent of the centres modified their clinical practice: 40.8% the diagnostic procedures, 80.9% the screening programme, 50% cancelled curative and/or palliative treatments for LC, and 41.7% modified the liver transplantation programme. Forty-five out of 69 (65.2%) centres in which clinical trials were running modified their treatments in that setting, but 58.1% were able to recruit new patients. The phone call service was modified in 51.4% of centres which had this service before the COVID-19 pandemic (n = 19/37)., [Conclusions] The first wave of the COVID-19 pandemic had a tremendous impact on the routine care of patients with liver cancer. Modifications in screening, diagnostic, and treatment algorithms may have significantly impaired the outcome of patients. Ongoing data collection and future analyses will report the benefits and disadvantages of the strategies implemented, aiding future decision-making., [Lay summary] The coronavirus disease 2019 (COVID-19) pandemic has posed unprecedented challenges to healthcare systems globally. Herein, we assessed the impact of the first wave pandemic on patients with liver cancer and found that routine care for these patients has been majorly disrupted, which could have a significant impact on outcomes.
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- 2021
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31. Risk of recurrence of gastrointestinal stromal tumour after surgery: an analysis of pooled population-based cohorts.
- Author
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Joensuu H, Vehtari A, Riihimäki J, Nishida T, Steigen SE, Brabec P, Plank L, Nilsson B, Cirilli C, Braconi C, Bordoni A, Magnusson MK, Linke Z, Sufliarsky J, Federico M, Jonasson JG, Dei Tos AP, and Rutkowski P
- Abstract
BACKGROUND: The risk of recurrence of gastrointestinal stromal tumour (GIST) after surgery needs to be estimated when considering adjuvant systemic therapy. We assessed prognostic factors of patients with operable GIST, to compare widely used risk-stratification schemes and to develop a new method for risk estimation. METHODS: Population-based cohorts of patients diagnosed with operable GIST, who were not given adjuvant therapy, were identified from the literature. Data from ten series and 2560 patients were pooled. Risk of tumour recurrence was stratified using the National Institute of Health (NIH) consensus criteria, the modified consensus criteria, and the Armed Forces Institute of Pathology (AFIP) criteria. Prognostic factors were examined using proportional hazards and non-linear models. The results were validated in an independent centre-based cohort consisting of 920 patients with GIST. FINDINGS: Estimated 15-year recurrence-free survival (RFS) after surgery was 59·9% (95% CI 56·2-63·6); few recurrences occurred after the first 10 years of follow-up. Large tumour size, high mitosis count, non-gastric location, presence of rupture, and male sex were independent adverse prognostic factors. In receiver operating characteristics curve analysis of 10-year RFS, the NIH consensus criteria, modified consensus criteria, and AFIP criteria resulted in an area under the curve (AUC) of 0·79 (95% CI 0·76-0·81), 0·78 (0·75-0·80), and 0·82 (0·80-0·85), respectively. The modified consensus criteria identified a single high-risk group. Since tumour size and mitosis count had a non-linear association with the risk of GIST recurrence, novel prognostic contour maps were generated using non-linear modelling of tumour size and mitosis count, and taking into account tumour site and rupture. The non-linear model accurately predicted the risk of recurrence (AUC 0·88, 0·86-0·90). INTERPRETATION: The risk-stratification schemes assessed identify patients who are likely to be cured by surgery alone. Although the modified NIH classification is the best criteria to identify a single high-risk group for consideration of adjuvant therapy, the prognostic contour maps resulting from non-linear modelling are appropriate for estimation of individualised outcomes. FUNDING: Academy of Finland, Cancer Society of Finland, Sigrid Juselius Foundation and Helsinki University Research Funds. [ABSTRACT FROM AUTHOR]
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- 2012
32. Modulation of biliary cancer chemo-resistance through microRNA-mediated rewiring of the expansion of CD133+ cells
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Andrea Lampis, Nicola Valeri, Stuart J. Forbes, Vladimir Kirkin, Vincenzo Cardinale, Pietro Carotenuto, Lorenza Rimassa, Armando Santoro, Vincenza Guzzardo, Sofia Ventura, Umberto Cillo, Ian Said-Huntingford, Massimo Roncalli, Domenico Alvaro, Vasiliki Michalarea, Luciano Cascione, Massimiliano Salati, Luke Boulter, Paul Workman, Chiara Braconi, Daniele Costantini, Michele Ghidini, Paul A. Clarke, Rachel V. Guest, David Cunningham, Georgios Vlachogiannis, Somaieh Hedayat, Guido Carpino, Elizabeth C Smyth, Matteo Fassan, Aldo Scarpa, Robert te Poele, Ruwaida Begum, Caterina Vicentini, Francesco Trevisani, Jens C. Hahne, Carotenuto, P., Hedayat, S., Fassan, M., Cardinale, V., Lampis, A., Guzzardo, V., Vicentini, C., Scarpa, A., Cascione, L., Costantini, D., Carpino, G., Alvaro, D., Ghidini, M., Trevisani, F., Te Poele, R., Salati, M., Ventura, S., Vlachogiannis, G., Hahne, J. C., Boulter, L., Forbes, S. J., Guest, R. V., Cillo, U., Said-Huntingford, I., Begum, R., Smyth, E., Michalarea, V., Cunningham, D., Rimassa, L., Santoro, A., Roncalli, M., Kirkin, V., Clarke, P., Workman, P., Valeri, N., and Braconi, C.
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High-Throughput Screening Assay ,0301 basic medicine ,Xenograft Model Antitumor Assay ,Cell Survival ,Antineoplastic Agents ,Cancer Stem Cell ,chemotherapy ,Deoxycytidine ,Cholangiocarcinoma ,FZD8 ,MIR1249 ,Antineoplastic Agent ,03 medical and health sciences ,0302 clinical medicine ,In vivo ,Cancer stem cell ,Cell Line, Tumor ,Gene expression ,microRNA ,Drug Discovery ,medicine ,Humans ,Hepatobiliary Malignancies ,CRISPR-Cas System ,Viability assay ,Cell Proliferation ,Cisplatin ,Hepatology ,Chemistry ,Original Articles ,Xenograft Model Antitumor Assays ,Gemcitabine ,High-Throughput Screening Assays ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,030104 developmental biology ,Biliary Tract Neoplasms ,Biliary Tract Neoplasm ,Cell culture ,Drug Resistance, Neoplasm ,Cancer research ,030211 gastroenterology & hepatology ,Original Article ,CRISPR-Cas Systems ,Human ,medicine.drug - Abstract
Background and Aims: Changes in single microRNA (miRNA) expression have been associated with chemo-resistance in biliary tract cancers (BTCs). However, a global assessment of the dynamic role of the microRNome has never been performed to identify potential therapeutic targets that are functionally relevant in the BTC cell response to chemotherapy. Approach and Results: High-throughput screening (HTS) of 997 locked nucleic acid miRNA inhibitors was performed in six cholangiocarcinoma cell lines treated with cisplatin and gemcitabine (CG) seeking changes in cell viability. Validation experiments were performed with mirVana probes. MicroRNA and gene expression was assessed by TaqMan assay, RNA-sequencing, and in situ hybridization in four independent cohorts of human BTCs. Knockout of microRNA was achieved by CRISPR-CAS9 in CCLP cells (MIR1249KO) and tested for effects on chemotherapy sensitivity in vitro and in vivo. HTS revealed that MIR1249 inhibition enhanced chemotherapy sensitivity across all cell lines. MIR1249 expression was increased in 41% of cases in human BTCs. In validation experiments, MIR1249 inhibition did not alter cell viability in untreated or dimethyl sulfoxide–treated cells; however, it did increase the CG effect. MIR1249 expression was increased in CD133+ biliary cancer cells freshly isolated from the stem cell niche of human BTCs as well as in CD133+ chemo-resistant CCLP cells. MIR1249 modulated the chemotherapy-induced enrichment of CD133+ cells by controlling their clonal expansion through the Wnt-regulator FZD8. MIR1249KO cells had impaired expansion of the CD133+ subclone and its enrichment after chemotherapy, reduced expression of cancer stem cell markers, and increased chemosensitivity. MIR1249KO xenograft BTC models showed tumor shrinkage after exposure to weekly CG, whereas wild-type models showed only stable disease over treatment. Conclusions: MIR1249 mediates resistance to CG in BTCs and may be tested as a target for therapeutics.
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- 2019
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33. Oligometastatic gastric cancer: An emerging clinical entity with distinct therapeutic implications
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Massimiliano Salati, Nicola Valeri, Stefano Cascinu, Andrea Spallanzani, Chiara Braconi, Salati, M., Valeri, N., Spallanzani, A., Braconi, C., and Cascinu, S.
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Oncology ,Adult ,Male ,medicine.medical_specialty ,Advanced gastric cancer ,medicine.medical_treatment ,Adenocarcinoma ,Risk Assessment ,Disease-Free Survival ,03 medical and health sciences ,0302 clinical medicine ,Gastrectomy ,Stomach Neoplasms ,Internal medicine ,Perioperative chemotherapy ,Medicine ,Humans ,In patient ,Neoplasm Invasiveness ,Aged ,Neoplasm Staging ,Chemotherapy ,business.industry ,Advanced stage ,Metastasectomy ,Cancer ,Microsatellite instability ,General Medicine ,Middle Aged ,medicine.disease ,Prognosis ,Combined Modality Therapy ,Survival Analysis ,United Kingdom ,Clinical Trials, Phase III as Topic ,Italy ,Chemotherapy, Adjuvant ,030220 oncology & carcinogenesis ,High status ,Lymphatic Metastasis ,030211 gastroenterology & hepatology ,Surgery ,Female ,Lymph Nodes ,business ,Oligometastases - Abstract
Gastric cancer (GC) remains responsible for a high burden worldwide being the third leading cause of cancer-related mortality. Most of patients present at an advanced stage at diagnosis and are thus candidates to standard chemotherapy resulting in median survival of less than 1 year. Oligometastatic gastric cancer is an increasingly recognized clinical entity characterized by limited metastatic spread that has been showing to benefit from aggressive multimodality strategies encompassing chemotherapy and surgery. The ongoing RENAISSANCE/AIO-FLOT5 (NCT02578368) phase III trial is aimed at evaluating if perioperative chemotherapy with FLOT in combination with surgical resection of the primary tumour and metastases could become the new standard of care for oligometastatic GC. In the meantime, in addition to currently available clinical parameters, the emerging predictive/prognostic role of biomarkers such mismatch repair deficiency/microsatellite instability high status needs to be specifically addressed also in this subgroup of GC to assist in patient selection.
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- 2019
34. The A.L.A.N. score identifies prognostic classes in advanced biliary cancer patients receiving first-line chemotherapy
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Angela Gillbanks, Luigi Marcheselli, Andrea Spallanzani, David Cunningham, Chiara Baratelli, Vasiliki Michalarea, Margherita Rimini, R. Kalaitzaki, Elyzabeth Smyth, Chiara Braconi, Francesco Caputo, Massimiliano Salati, Kyriakos Kouvelakis, Francesca Rovinelli, Fabio Gelsomino, Kalliopi Andrikou, Stefano Cascinu, Luca Reggiani-Bonetti, Salati, M., Caputo, F., Cunningham, D., Marcheselli, L., Spallanzani, A., Rimini, M., Gelsomino, F., Reggiani-Bonetti, L., Andrikou, K., Rovinelli, F., Smyth, E., Baratelli, C., Kouvelakis, K., Kalaitzaki, R., Gillbanks, A., Michalarea, V., Cascinu, S., and Braconi, C.
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0301 basic medicine ,Male ,Cancer Research ,Multivariate analysis ,Survival ,Neutrophils ,medicine.medical_treatment ,Monocytes ,Cholangiocarcinoma ,0302 clinical medicine ,Antineoplastic Combined Chemotherapy Protocols ,80 and over ,Lymphocytes ,Neoplasm Metastasis ,Biliary cancer ,Aged, 80 and over ,Tumor ,Score ,Middle Aged ,Prognosis ,Survival Rate ,Biliary Tract Neoplasms ,Oncology ,030220 oncology & carcinogenesis ,Cohort ,Absolute neutrophil count ,Female ,medicine.drug ,Adult ,medicine.medical_specialty ,03 medical and health sciences ,Internal medicine ,Albumins ,medicine ,Biomarkers, Tumor ,Humans ,Gallbladder cancer ,Aged ,Retrospective Studies ,Inflammation ,Chemotherapy ,Cisplatin ,Gemcitabine ,Immunity ,Follow-Up Studies ,business.industry ,medicine.disease ,Clinical trial ,030104 developmental biology ,business ,Biomarkers - Abstract
Background:\ud \ud Chemotherapy is the mainstay treatment for advanced biliary cancer (ABC). Best supportive care and clinical trials are currently alternative options. The identification of a prognostic score that can be widely applied to daily practice has the potential to better inform clinical management of ABC patients.\ud Methods:\ud \ud A cohort of 123 ABC patients undergoing first-line chemotherapy was used as an exploratory cohort to define the prognostic value of laboratory tests routinely performed in clinical practice. Kaplan–Meier analysis was used to investigate the association between the variables and overall survival (OS). Those variables that were statistically significant at the multivariate analysis were combined in a multiplex score. Performance of the novel prognostic score was confirmed in a validation cohort of 60 ABC patients.\ud Results:\ud \ud Baseline actual neutrophil count, lymphocytes-monocytes ratio, neutrophil-lymphocytes ratio and albumin (A.L.A.N.) correlated with OS at the multivariate analysis in the exploratory cohort. When combined in the multiplex, A.L.A.N. score was able to identify three classes of ABC patients with significantly different OS (high-risk: median OS, 5 months; intermediate-risk: median OS, 12 months and low-risk: median OS, 22 months; p
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- 2019
35. MIR21 drives resistance to Heat Shock Protein 90 inhibition in cholangiocarcinoma
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Lampis, Andrea, Carotenuto, Pietro, Vlachogiannis, Georgios, Cascione, Luciano, Hedayat, Somaieh, Burke, Rosemary, Clarke, Paul, Bosma, Else, Simbolo, Michele, Scarpa, Aldo, Yu, Sijia, Cole, Rebecca, Smyth, Elizabeth, Mateos, Javier Fernández, Begum, Ruwaida, Hezelova, Blanka, Eltahir, Zakaria, Wotherspoon, Andrew, Fotiadis, Nicos, Bali, Maria Antonietta, Nepal, Chirag, Khan, Khurum, Stubbs, Mark, Hahne, Jens C., Gasparini, Pierluigi, Guzzardo, Vincenza, Croce, Carlo M., Eccles, Suzanne, Fassan, Matteo, Cunningham, David, Andersen, Jesper B., Workman, Paul, Valeri, Nicola, Braconi, Chiara, Lampis, A., Carotenuto, P., Vlachogiannis, G., Cascione, L., Hedayat, S., Burke, R., Clarke, P., Bosma, E., Simbolo, M., Scarpa, A., Yu, S., Cole, R., Smyth, E., Mateos, J. F., Begum, R., Hezelova, B., Eltahir, Z., Wotherspoon, A., Fotiadis, N., Bali, M. A., Nepal, C., Khan, K., Stubbs, M., Hahne, J. C., Gasparini, P., Guzzardo, V., Croce, C. M., Eccles, S., Fassan, M., Cunningham, D., Andersen, J. B., Workman, P., Valeri, N., and Braconi, C.
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WT, wild type ,Time Factors ,Transcription Factor ,Mice, SCID ,DMSO, dimethyl sulfoxide ,Antineoplastic Agent ,Cholangiocarcinoma ,Mice, Inbred NOD ,AUY922 ,DNAJB5 ,bile duct cancer ,organoid ,miRNA, microRNA ,PDO, patient-derived organoid ,Tumor Cells, Cultured ,Nuclear Protein ,Nuclear Proteins ,MicroRNA ,HTS, high-throughput screen ,Isocitrate Dehydrogenase ,DNA-Binding Proteins ,Organoids ,FFPE, formalin-fixed paraffin-embedded ,Gene Expression Regulation, Neoplastic ,GI, growth inhibition ,HSP, heat shock protein ,Human ,Signal Transduction ,CCA, cholangiocarcinoma ,FGFR, fibroblast growth factor receptor ,Xenograft Model Antitumor Assay ,Time Factor ,Cell Survival ,DNA-Binding Protein ,Antineoplastic Agents ,Transfection ,Article ,Cell Line, Tumor ,Journal Article ,Animals ,Humans ,HSP90 Heat-Shock Proteins ,Bile Duct Neoplasm ,Dose-Response Relationship, Drug ,iCCA, intrahepatic cholantiocarcinoma ,Animal ,HSP40 Heat-Shock Proteins ,Xenograft Model Antitumor Assays ,MicroRNAs ,HSP90 Heat-Shock Protein ,Bile Duct Neoplasms ,Drug Resistance, Neoplasm ,Mutation ,HSP40 Heat-Shock Protein ,Transcription Factors - Abstract
Background & Aims: \ud Cholangiocarcinomas (CCA) are resistant to chemotherapy, so new therapeutic agents are needed. We performed a screen to identify small-molecule compounds that are active against CCAs. Levels of microRNA 21 (MIR21 or miRNA21) are increased in CCAs. We investigated whether miRNA21 mediates resistance of CCA cells and organoids to HSP90 inhibitors.\ud \ud Methods: \ud We performed a high-throughput screen of 484 small-molecule compounds to identify those that reduced viability of 6 human CCA cell lines. We tested the effects of HSP90 inhibitors on cells with disruption of the MIR21 gene, cells incubated with MIR21 inhibitors, and stable cell lines with inducible expression of MIR21. We obtained CCA biopsies from patients, cultured them as organoids (patient-derived organoids). We assessed their architecture, mutation and gene expression patterns, response to compounds in culture, and when grown as subcutaneous xenograft tumors in mice.\ud \ud Results: \ud Cells with IDH1 and PBRM1 mutations had the highest level of sensitivity to histone deacetylase inhibitors. HSP90 inhibitors were effective in all cell lines, irrespective of mutations. Sensitivity of cells to HSP90 inhibitors correlated inversely with baseline level of MIR21. Disruption of MIR21 increased cell sensitivity to HSP90 inhibitors. CCA cells that expressed transgenic MIR21 were more resistant to HSP90 inhibitors than cells transfected with control vectors; inactivation of MIR21 in these cells restored sensitivity to these agents. MIR21 was shown to target the DnaJ heat shock protein family (Hsp40) member B5 (DNAJB5). Transgenic expression of DNAJB5 in CCA cells that overexpressed MIR21 re-sensitized them to HSP90 inhibitors. Sensitivity of patient-derived organoids to HSP90 inhibitors, in culture and when grown as xenograft tumors in mice, depended on expression of miRNA21.\ud \ud Conclusions: \ud miRNA21 appears to mediate resistance of CCA cells to HSP90 inhibitors by reducing levels of DNAJB5. HSP90 inhibitors might be developed for the treatment of CCA and miRNA21 might be a marker of sensitivity to these agents.
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- 2018
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36. Characterisation of the immune-related transcriptome in resected biliary tract cancers
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Pietro Carotenuto, Umberto Cillo, Ian Said-Huntingford, Lorenza Rimassa, Claudia Mescoli, Andrea Lampis, Armando Santoro, Alessandro Zerbi, Matteo Fassan, Chiara Braconi, Massimo Rugge, Michele Ghidini, Maria C. Previdi, Nicola Valeri, Massimo Roncalli, Maya Raj, Francesco Trevisani, Jens C. Hahne, Guido Torzilli, Luciano Cascione, Ghidini, M., Cascione, L., Carotenuto, P., Lampis, A., Trevisani, F., Previdi, M. C., Hahne, J. C., Said-Huntingford, I., Raj, M., Zerbi, A., Mescoli, C., Cillo, U., Rugge, M., Roncalli, M., Torzilli, G., Rimassa, L., Santoro, A., Valeri, N., Fassan, M., and Braconi, C.
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Male ,Oncology ,CD80, cluster of differentiation 80 ,Cancer Research ,Time Factors ,CTLA4, cytotoxic T-lymphocyte antigen-4 ,T-Lymphocytes ,Kaplan-Meier Estimate ,Bioinformatics ,POLR2A, RNA polymerase II subunit A ,T-Lymphocytes, Regulatory ,R1, positive resection margins ,Cholangiocarcinoma ,Transcriptome ,0302 clinical medicine ,CD80 ,Retrospective Studie ,TGFB1, transforming growth factor beta ,ECC, extrahepatic CCA ,Tumor Microenvironment ,CTLA-4 Antigen ,Lymphocytes ,Multivariate Analysi ,Adjuvant ,CTLA4 ,Biliary tract neoplasm ,Tumor ,Treg ,Adult ,Aged ,B7-1 Antigen ,Biliary Tract Neoplasms ,Biliary Tract Surgical Procedures ,Biomarkers, Tumor ,Disease-Free Survival ,Female ,Forkhead Transcription Factors ,Gene Expression Profiling ,Gene Expression Regulation, Neoplastic ,Humans ,Italy ,Lymphocytes, Tumor-Infiltrating ,Middle Aged ,Multivariate Analysis ,Proportional Hazards Models ,Retrospective Studies ,Treatment Outcome ,Tumor Escape ,FOXP3 ,TT, tumour tissue ,Regulatory ,IL-6, interleukin 6 ,Treg, T regulatory cell ,BTC, biliary tract cancer ,GBC, gallbladder cancer ,Biliary Tract Neoplasm ,030220 oncology & carcinogenesis ,030211 gastroenterology & hepatology ,PBK, PDZ binding kinase ,Human ,medicine.medical_specialty ,CCA, cholangiocarcinoma ,Time Factor ,AT, adjacent tissue ,chemical and pharmacologic phenomena ,Biology ,Article ,03 medical and health sciences ,Immune system ,Internal medicine ,RFS, relapse-free survival ,medicine ,ICC, intrahepatic CCA ,Tumor-Infiltrating ,FFPE, formalin fixed paraffin embedded ,Neoplastic ,Tumor microenvironment ,Cluster of differentiation ,IP, immune profile ,Forkhead Transcription Factor ,IPA, ingenuity pathway analysis ,Gene expression profiling ,Biliary Tract Surgical Procedure ,R0, clear resection margins ,APC, antigen-presenting cell ,Gene Expression Regulation ,Proportional Hazards Model ,Biomarkers - Abstract
Although biliary tract cancers (BTCs) are known to have an inflammatory component, a detailed characterisation of immune-related transcripts has never been performed. In these studies, nCounter PanCancer Immune Profiling Panel was used to assess the expression of 770 immune-related transcripts in the tumour tissues (TTs) and matched adjacent tissues (ATs) of resected BTCs. Cox regression analysis and Kaplan–Meier methods were used to correlate findings with relapse-free survival (RFS). The first analysis in the TT and AT of an exploratory set (n = 22) showed deregulation of 39 transcripts associated with T-cell activation. Risk of recurrence was associated with a greater number of genes deregulated in AT in comparison to TT. Analysis in the whole set (n = 53) showed a correlation between AT cytotoxic T-lymphocyte antigen-4 (CTLA4) expression and RFS, which maintained statistical significance at multivariate analysis. CTLA4 expression correlated with forkhead box P3 (FOXP3) expression, suggesting enrichment in T regulatory cells. CTLA4 is known to act by binding to the cluster of differentiation 80 (CD80). No association was seen between AT CD80 expression and RFS. However, CD80 expression differentiated prognosis in patients who received adjuvant chemotherapy. We showed that the immunomodulatory transcriptome is deregulated in resected BTCs. Our study includes a small number of patients and does not enable to draw definitive conclusions; however, it provides useful insights into potential transcripts that may deserve further investigation in larger cohorts of patients. Transcript Profiling Nanostring data have been submitted to GEO repository: GSE90698 and GSE90699., Highlights • BTCs harbour a derangement of immune-related transcripts with an important role for the cytotoxic T-lymphocyte antigen-4 (CTLA4) axis. • CTLA4 expression in the peritumoural areas correlates with outcome and represents a potential promising prognostic factor. • Our data suggest that immunotherapy may have an impact in BTCs as a mean to re-address the host immune response to the tumour.
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- 2017
37. Noncoding RNAs as novel biomarkers in pancreatic cancer: What do we know?
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Mc, Previdi, Carotenuto P, Zito D, Pandolfo R, chiara braconi, Previdi, M. C., Carotenuto, P., Zito, D., Pandolfo, R., and Braconi, C.
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RNA, Untranslated ,Prognosi ,pancreatic cancer ,Pancreatic Neoplasm ,MicroRNA ,Genetic Therapy ,Adenocarcinoma ,ncRNA ,Gene Expression Regulation, Neoplastic ,lncRNA ,Biomarkers, Tumor ,biomarker ,RNA, Long Noncoding ,RNA, Messenger ,miRNA ,Human - Abstract
Pancreatic cancer is an aggressive cancer of the digestive system, which is becoming a serious health problem worldwide. Overall survival for patients with pancreatic cancer is poor, mainly due to a lack of biomarkers to enable early diagnosis and a lack of prognostic markers that can inform decision-making, facilitating personalized treatment and an optimal clinical outcome. ncRNAs play an important role in pancreatic carcinogenesis. Here we review the literature on the role of ncRNAs as biomarkers in pancreatic cancer. We focus on the significance of ncRNAs as markers for early diagnosis, as prognostic biomarkers able to inform clinical management and as targets for novel therapeutics for patients with pancreatic cancer.
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- 2017
38. MicroRNA 193b-3p as a predictive biomarker of chronic kidney disease in patients undergoing radical nephrectomy for renal cell carcinoma
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Trevisani, Francesco, Ghidini, Michele, Larcher, Alessandro, Lampis, Andrea, Lote, Hazel, Manunta, Paolo, Alibrandi, Maria Teresa Sciarrone, Zagato, Laura, Citterio, Lorena, Dell'Antonio, Giacomo, Carenzi, Cristina, Capasso, Giovambattista, Rugge, Massimo, Rigotti, Paolo, Bertini, Roberto, Cascione, Luciano, Briganti, Alberto, Salonia, Andrea, Benigni, Fabio, Braconi, Chiara, Fassan, Matteo, Hahne, Jens Claus, Montorsi, Francesco, Valeri, Nicola, Trevisani, Francesco, Ghidini, Michele, Larcher, Alessandro, Lampis, Andrea, Lote, Hazel, Manunta, Paolo, Alibrandi, Maria Teresa Sciarrone, Zagato, Laura, Citterio, Lorena, Dell'Antonio, Giacomo, Carenzi, Cristina, Capasso, Giovambattista, Rugge, Massimo, Rigotti, Paolo, Bertini, Roberto, Cascione, Luciano, Briganti, Alberto, Salonia, Andrea, Benigni, Fabio, Braconi, Chiara, Fassan, Matteo, Hahne, Jens Clau, Montorsi, Francesco, Valeri, Nicola, Trevisani, F, Ghidini, M, Larcher, A, Lampis, A, Lote, H, Manunta, P, Alibrandi, Mt, Zagato, L, Citterio, L, Dell'Antonio, G, Carenzi, C, Rugge, M, Rigotti, P, Bertini, R, Cascione, L, Briganti, A, Salonia, A, Benigni, F, Braconi, C, Fassan, M, Hahne, Jc, Montorsi, F, and Valeri, N.
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Cancer Research ,microRNA ,kidney cancer ,biomarkers ,Kidney Neoplasm ,MicroRNA ,urologic and male genital diseases ,Nephrectomy ,Kidney Neoplasms ,female genital diseases and pregnancy complications ,microRNAs ,Oncology ,Biomarkers, Tumor ,Humans ,Translational Therapeutics ,clear-cell renal carcinoma ,Carcinoma, Renal Cell ,chronic kidney disease ,radical nephrectomy ,Glomerular Filtration Rate ,Human - Abstract
Background:\ud A significant proportion of patients undergoing radical nephrectomy (RN) for clear-cell renal cell carcinoma (RCC) develop chronic kidney disease (CKD) within a few years following surgery. Chronic kidney disease has important health, social and economic impact and no predictive biomarkers are currently available. MicroRNAs (miRs) are small non-coding RNAs implicated in several pathological processes.\ud \ud Methods:\ud Primary objective of our study was to define miRs whose deregulation is predictive of CKD in patients treated with RN. Ribonucleic acid from formalin-fixed paraffin embedded renal parenchyma (cortex and medulla isolated separately) situated >3 cm from the matching RCC was tested for miR expression using nCounter NanoString technology in 71 consecutive patients treated with RN for RCC. Validation was performed by RT–PCR and in situ hybridisation. End point was post-RN CKD measured 12 months post-operatively. Multivariable logistic regression and decision curve analysis were used to test the statistical and clinical impact of predictors of CKD.\ud \ud Results:\ud The overexpression of miR-193b-3p was associated with high risk of developing CKD in patients undergoing RN for RCC and emerged as an independent predictor of CKD. The addition of miR-193b-3p to a predictive model based on clinical variables (including sex and estimated glomerular filtration rate) increased the sensitivity of the predictive model from 81 to 88%. In situ hybridisation showed that miR-193b-3p overexpression was associated with tubule-interstitial inflammation and fibrosis in patients with no clinical or biochemical evidence of pre-RN nephropathy.\ud \ud Conclusions:\ud miR-193b-3p might represent a useful biomarker to tailor and implement surveillance strategies for patients at high risk of developing CKD following RN.
- Published
- 2016
39. P64 THE ULTRACONSERVED NON CODING RNA UC.158 IS DOWNSTREAM OF THE WNT/b-CATENIN PATHWAY IN LIVER CANCERS.
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Paulus-Hock, V., Lampis, A., Ferrari, G., Boulton, L., Guest, R., Athineos, D., Jamieson, T., Veronese, A., Visone, R., Evans, R., Feng, G.J., Dale, T., Negrini, M., Forbes, S., Patel, T., Sansom, O., Valeri, N., and Braconi, C.
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- *
LIVER cancer , *NON-coding RNA , *WNT genes , *CATENINS , *HEPATOLOGY , *GENETICS - Published
- 2014
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40. Stroma-tology: Predicting Recurrence in Cholangiocarcinoma.
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Marco S and Braconi C
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- 2024
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41. Efficacy of cisplatin-gemcitabine-durvalumab in patients with advanced biliary tract cancer experiencing early vs late disease relapse after surgery: a large real-life worldwide population.
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Lo Prinzi F, Salani F, Rimini M, Rizzato MD, Antonuzzo L, Camera S, Satake T, Vandeputte H, Vivaldi C, Pressiani T, Lucchetti J, Kim JW, Abidoye O, Rapposelli IG, Tamberi S, Finkelmeier F, Giordano G, Pircher C, Chon HJ, Braconi C, Pastorino A, Castet F, Tamburini E, Yoo C, Parisi A, Diana A, Scartozzi M, Prager GW, Avallone A, Schirripa M, Kim IH, Perkhofer L, Oneda E, Verrico M, Adeva J, Chan SL, Spinelli GP, Personeni N, Garajova I, Rodriquenz MG, Leo S, Melo Alvim C, Roque R, Fornaro L, De Rosa A, Lavacchi D, Rossari F, Ikeda M, Dekervel J, Niger M, Balsano R, Tonini G, Kang M, Bekaii-Saab T, Viola MG, Silvestro L, Esposito L, Boccaccino A, Himmelsbach V, Landriscina M, Ahcene Djaballah S, Zanuso V, Masi G, Lonardi S, Rimassa L, and Casadei-Gardini A
- Abstract
Background: In the TOPAZ-1, patients with biliary tract cancers (BTC) and recurrence within 6 months after surgery were excluded, even if this event is frequently observed in clinical practice. Our study aimed to assess if the efficacy of cisplatin-gemcitabine-durvalumab (CGD) in this population is comparable to that reported in the phase 3 trial., Methods: The study cohort included patients with BTC who underwent surgery on the primary tumor, experienced disease recurrence occurring ≤6 months or >6 months after surgery or after the end of adjuvant therapy and started CGD. The primary objectives were overall survival (OS) and progression free survival (PFS)., Results: A total of 178 patients were enrolled. No significant differences were observed between early and late relapse groups in OS (23.4 months vs not reached; HR 1.26; 95% CI, 0.67-2.37; P = .45) and PFS [7.0 months vs 9.8 months; HR 1.3(95% CI, 0.9-2.1) P = .13]. Overall response rate and disease control rate (P = .33 and P = .62) were comparable between the 2 groups, as the overall safety profile. In addition, we compared survival outcomes between the selected population and a historical cohort of patients with BTC treated with cisplatin-gemcitabine (CG) and found that despite the absence of statistical significance, CGD showed an outcome trend compared with CG regardless of the time of recurrence after surgery or adjuvant chemotherapy [(CG ≤ 6 vs CGD ≤ 6 months: HR 0.59, 95%CI, 0.35-1.01, P = .05; HR 0.70; 95%CI, 0.46-1.06, P = .09, OS and PFS, respectively) and (CG > 6 vs. CGD > 6 months: HR 0.50; 95%CI, 0.29-0.88, P = 0.0165; HR 0.54; 95%CI, 0.35-0.84, P = .0068, OS and PFS, respectively)]., Conclusion: Our analysis suggests that CGD retains its efficacy independently of the timing of relapse after surgery or completion of adjuvant treatment in patients with advanced BTC., (© The Author(s) 2024. Published by Oxford University Press.)
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- 2024
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42. Comparing Survival of Perihilar Cholangiocarcinoma After R1 Resection Versus Palliative Chemotherapy for Unresected Localized Disease.
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van Keulen AM, Buettner S, Olthof PB, Klümpen HJ, Erdmann JI, Izquierdo-Sanchez L, Banales JM, Goeppert B, Roessler S, Zieniewicz K, Lamarca A, Valle JW, La Casta A, Hoogwater FJH, Donadon M, Scheiter A, Marzioni M, Adeva J, Kiudeliene E, Fernández JMU, Vidili G, Mocan T, Fabris L, Krawczyk M, Folseraas T, Dopazo C, Detry O, Voiosu T, Scripcariu V, Biancaniello F, Braconi C, Macias RIR, and Groot Koerkamp B
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- Humans, Male, Female, Survival Rate, Aged, Middle Aged, Follow-Up Studies, Prognosis, Hepatectomy mortality, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Retrospective Studies, Klatskin Tumor mortality, Klatskin Tumor surgery, Klatskin Tumor pathology, Klatskin Tumor drug therapy, Bile Duct Neoplasms pathology, Bile Duct Neoplasms mortality, Bile Duct Neoplasms surgery, Bile Duct Neoplasms drug therapy, Palliative Care methods
- Abstract
Background: Resection of perihilar cholangiocarcinoma (pCCA) is a complex procedure with a high risk of postoperative mortality and early disease recurrence. The objective of this study was to compare patient characteristics and overall survival (OS) between pCCA patients who underwent an R1 resection and patients with localized pCCA who received palliative systemic chemotherapy., Methods: Patients with a diagnosis of pCCA between 1997-2021 were identified from the European Network for the Study of Cholangiocarcinoma (ENS-CCA) registry. pCCA patients who underwent an R1 resection were compared with patients with localized pCCA (i.e., nonmetastatic) who were ineligible for surgical resection and received palliative systemic chemotherapy. The primary outcome was OS., Results: Overall, 146 patients in the R1 resection group and 92 patients in the palliative chemotherapy group were included. The palliative chemotherapy group more often underwent biliary drainage (95% vs. 66%, p < 0.001) and had more vascular encasement on imaging (70% vs. 49%, p = 0.012) and CA 19.9 was more frequently >200 IU/L (64 vs. 45%, p = 0.046). Median OS was comparable between both groups (17.1 vs. 16 months, p = 0.06). Overall survival at 5 years after diagnosis was 20.0% with R1 resection and 2.2% with chemotherapy. Type of treatment (i.e., R1 resection or palliative chemotherapy) was not an independent predictor of OS (hazard ratio 0.76, 95% confidence interval 0.55-1.07)., Conclusions: Palliative systemic chemotherapy should be considered instead of resection in patients with a high risk of both R1 resection and postoperative mortality., (© 2024. The Author(s).)
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- 2024
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43. Durvalumab plus gemcitabine and cisplatin in advanced biliary tract cancer: A large real-life worldwide population.
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Rimini M, Fornaro L, Rizzato MD, Antonuzzo L, Rossari F, Satake T, Vandeputte H, Vivaldi C, Pressiani T, Lucchetti J, Kim JW, Abidoye O, Rapposelli IG, Tamberi S, Finkelmeier F, Giordano G, Nichetti F, Chon HJ, Braconi C, Pirrone C, Castet F, Tamburini E, Yoo C, Parisi A, Diana A, Scartozzi M, Prager GW, Avallone A, Schirripa M, Kim IH, Perkhofer L, Oneda E, Verrico M, Adeva J, Chan SL, Spinelli GP, Personeni N, Garajova I, Rodriquenz MG, Leo S, Salani F, De Rosa A, Lavacchi D, Foti S, Ikeda M, Dekervel J, Niger M, Balsano R, Tonini G, Kang M, Bekaii-Saab T, Esposito L, Boccaccino A, Himmelsbach V, Landriscina M, Djaballah SA, Zanuso V, Masi G, Lonardi S, Rimassa L, and Casadei-Gardini A
- Subjects
- Humans, Male, Female, Middle Aged, Aged, Retrospective Studies, Adult, Aged, 80 and over, Gemcitabine, Cisplatin administration & dosage, Cisplatin therapeutic use, Biliary Tract Neoplasms drug therapy, Biliary Tract Neoplasms pathology, Biliary Tract Neoplasms mortality, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Antineoplastic Combined Chemotherapy Protocols adverse effects, Deoxycytidine analogs & derivatives, Deoxycytidine administration & dosage, Deoxycytidine adverse effects, Deoxycytidine therapeutic use, Antibodies, Monoclonal administration & dosage, Antibodies, Monoclonal adverse effects, Antibodies, Monoclonal therapeutic use
- Abstract
Background: The TOPAZ-1 phase III trial showed a survival benefit with durvalumab plus gemcitabine and cisplatin in patients with advanced biliary tract cancer (BTC). To understand this combination's real-world efficacy and tolerability, we conducted a global multicenter retrospective analysis of its first-line treatment outcomes., Methods: We included patients with unresectable, locally advanced, or metastatic BTC treated with durvalumab, gemcitabine, and cisplatin at 39 sites in 11 countries (Europe, the United States, and Asia). The primary endpoint was overall survival (OS)., Results: 666 patients were enrolled. Median OS was 15.1 months and median PFS was 8.2 months. The investigator-assessed overall response rate was 32.7 %, with stable disease in 45.2 % of patients. High baseline CEA levels, ECOG PS > 0, metastatic disease, and NLR > 3 were associated with poor survival. Any grade adverse events (AEs) occurred in 92.9 % of patients (grade >2: 46.6 %). Immune-related AEs (irAEs) occurred in 20.0 % (grade >2: 2.5 %). Three deaths (0.5 %) were deemed treatment-related, none linked to immunotherapy. Common irAEs were rash (8.2 % all grades; 0.3 % grade >2), itching (10.3 % all grades; 0.2 % grade >2), and hypothyroidism (5.1 % all grades; 0.3 % grade >2). Durvalumab discontinuation rate due to AEs was 1.5 %. ESMO-recommended genes were analyzed and no outcome differences were found. A comparative analysis with a historical cohort of patients treated with chemotherapy alone confirmed the positive survival impact of durvalumab in combination with cisplatin/gemcitabine., Conclusion: This first global real-world analysis largely confirmed the TOPAZ-1 findings, supporting gemcitabine, cisplatin, and durvalumab as a first-line standard of care for patients with advanced BTC., Competing Interests: Declaration of Competing Interest LR reports consulting fees from AbbVie, AstraZeneca, Basilea, Bayer, Elevar Therapeutics, Exelixis, Genenta, Hengrui, Incyte, Ipsen, IQVIA, Jazz Pharmaceuticals, MSD, Nerviano Medical Sciences, Roche, Servier, Taiho Oncology, Zymeworks; lecture fees from AstraZeneca, Bayer, BMS, Incyte, Ipsen, Roche, Servier; travel expenses from AstraZeneca; research grants (to Institution) from Agios, AstraZeneca, BeiGene, Eisai, Exelixis, Fibrogen, Incyte, Ipsen, Lilly, MSD, Nerviano Medical Sciences, Roche, Servier, Zymeworks. ACG reports consulting fees from AstraZeneca, Bayer, BMS, Eisai, Incyte, Ipsen, IQVIA, MSD, Roche, Servier; lecture fees from AstraZeneca, Bayer, BMS, Eisai, Incyte, Ipsen, Roche, Servier; travel expenses from AstraZeneca; research grants (to Institution) from AstraZeneca, Eisai. SLC serves an advisory member for AstraZeneca, MSD, Eisai, BMS, Ipsen, and Hengrui, received research funds from MSD, Eisai, Ipsen, SIRTEX, and Zailab, and honoraria from AstraZeneca, Eisai, Roche, Ipsen, and MSD. TP received consulting fees from Bayer, Ipsen, and AstraZeneca; institutional research funding from Roche, Bayer, and AstraZeneca; travel expenses from Roche. CB received honoraria as speaker (Astrazeneca, Incyte, Servier) and consultant (Incyte, Servier, Boehringer Ingelheim, Astrazeneca), received research funds (Avacta, Medannex, Servier) and her spouse is an employee of Astrazeneca. M. Ikeda reports honoraria from AstraZeneca, Chugai Pharma, Eisai, Incyte, Lilly Japan, MSD, Novartis, Ono Pharmaceutical, Takeda, Teijin Pharma, Nihon Servier, Taiho and research funding from AstraZeneca, Bayer, Bristol-Myers Squibb, Chiome Bioscience, Chugai, Eisai, Eli Lilly Japan, Delta-Fly Pharma, Invitae, J-Pharma, Merck biopharma, Merus N.V., MSD, Novartis, Nihon Servier, Ono, Syneos Health, and Rakuten Medical. GWP: Advisories and/or Speaker fees: Servier, Bayer, Roche Amgen, Merck, MSD, BMS, Sanofi, Lilly, Astra Zeneca, Astellas, Pierre-Fabre, Incyte, Arcus, CECOG. F. F. has received travel support from Ipsen, Abbvie, Astrazeneca and speaker’s fees from AbbVie, MSD, Ipsen, Astrazeneca. LP: Advisory role: AstraZeneca, Servier, Travel expenses: AstraZeneca, Ipsen. GG: Consulting Fees: Astra Zeneca, MSD, Servier, Seagen, Bayer, Amgen, Novartis, Ipsen, BMS. Travel Expenses: Astra Zeneca, Servier, Bayer, Novartis. S.L. reports research funding (to Institution) from Amgen, Astellas, Astra Zeneca, Bayer, Bristol-Myers Squibb, Daichii Sankyo, Hutchinson, Incyte, Merck Serono, Mirati, MSD, Pfizer, Roche, Servier; personal honoraria as invited speaker from Amgen, Astra Zeneca, Bristol-Myers Squibb, Incyte, GSK, Lilly, Merck Serono, MSD, Pierre-Fabre, Roche, Servier; participation in advisory board for Amgen, Astellas, Astra Zeneca, Bayer, Bristol-Myers Squibb, Daiichi-Sankyo, GSK, Incyte, Lilly, Merck Serono, MSD, Servier, Takeda, Rottapharm. JD received consulting fees and/or speaker honoraria from Amgen, AstraZeneca, Bayer, BMS, Eisai, Need Inc., Ipsen, Lilly, MediMix, Merck, MSD, Novartis, Roche and Servier. All remaining authors have declared no conflicts of interest., (Copyright © 2024 Elsevier Ltd. All rights reserved.)
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- 2024
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44. Insights for clinical management from the real-life data of the centralized West of Scotland biliary cancer clinic.
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Zanuso V, Nash T, Casolino R, Armstrong G, Pallise O, Milne J, and Braconi C
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- Humans, Middle Aged, Female, Male, Aged, Adult, Scotland epidemiology, Aged, 80 and over, Cholangiocarcinoma therapy, Cholangiocarcinoma pathology, Gallbladder Neoplasms therapy, Gallbladder Neoplasms pathology, Gallbladder Neoplasms epidemiology, Chemotherapy, Adjuvant, Biliary Tract Neoplasms therapy, Biliary Tract Neoplasms epidemiology
- Abstract
Background: With the increasing of novel therapeutics for the treatment of Biliary Tract Cancers (BTC), and the need to assess their socio-economic impacts for national licence approvals, it is as important as ever to have real-life data in national populations., Methods and Results: We performed an audit of the first 2 year-activity (Sep 2019-Sep 2021) of the centralized West-of-Scotland-BTC clinic. 122 patients accessed the service, including 68% with cholangiocarcinoma (CCA), 27% with gallbladder cancer (GBC), and 5% with ampulla of Vater carcinoma with biliary phenotype (AVC). Median age at diagnosis was 66 (28-84), with 30% of newly diagnosed patients being younger than 60 years-old. Thirty-five cases (29%) underwent surgery, followed by adjuvant-chemotherapy in 66%. 60% had recurrent disease (80% with distant relapse). Sixty-four patients (58%) started first-line Systemic-AntiCancer-Treatment (SACT). Of these, 37% received second line SACT, the majority of which had iCCA and GBC. Thirty-% of those who progressed received third line SACT., Conclusions: About 30% of BTC were eligible for curative surgery. Fifty-eight and twenty% of the overall cohort of advanced BTC patients received first and second line SACT. Our data suggest that reflex genomic profiling may not be cost-effective until molecularly driven strategies are limited to second line setting., (© 2024. The Author(s).)
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- 2024
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45. Circulating microRNA Analysis in a Prospective Co-clinical Trial Identifies MIR652-3p as a Response Biomarker and Driver of Regorafenib Resistance Mechanisms in Colorectal Cancer.
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Hedayat S, Cascione L, Cunningham D, Schirripa M, Lampis A, Hahne JC, Tunariu N, Hong SP, Marchetti S, Khan K, Fontana E, Angerilli V, Delrieux M, Nava Rodrigues D, Procaccio L, Rao S, Watkins D, Starling N, Chau I, Braconi C, Fotiadis N, Begum R, Guppy N, Howell L, Valenti M, Cribbes S, Kolozsvari B, Kirkin V, Lonardi S, Ghidini M, Passalacqua R, Elghadi R, Magnani L, Pinato DJ, Di Maggio F, Ghelardi F, Sottotetti E, Vetere G, Ciracì P, Vlachogiannis G, Pietrantonio F, Cremolini C, Cortellini A, Loupakis F, Fassan M, and Valeri N
- Subjects
- Humans, Animals, Female, Prospective Studies, Male, Mice, Xenograft Model Antitumor Assays, Gene Expression Regulation, Neoplastic drug effects, Aged, Liquid Biopsy methods, Middle Aged, Cell Line, Tumor, MicroRNAs genetics, MicroRNAs blood, Colorectal Neoplasms drug therapy, Colorectal Neoplasms genetics, Colorectal Neoplasms pathology, Colorectal Neoplasms blood, Phenylurea Compounds pharmacology, Phenylurea Compounds therapeutic use, Pyridines therapeutic use, Pyridines pharmacology, Drug Resistance, Neoplasm genetics, Biomarkers, Tumor genetics, Biomarkers, Tumor blood, Circulating MicroRNA
- Abstract
Purpose: The multi-kinase inhibitor (mKi) regorafenib has demonstrated efficacy in chemorefractory patients with metastatic colorectal cancer (mCRC). However, lack of predictive biomarkers and concerns over significant toxicities hamper the use of regorafenib in clinical practice., Experimental Design: Serial liquid biopsies were obtained at baseline and monthly until disease progression in chemorefractory patients with mCRC treated with regorafenib in a phase II clinical trial (PROSPECT-R n = 40; NCT03010722) and in a multicentric validation cohort (n = 241). Tissue biopsies collected at baseline, after 2 months and at progression in the PROSPECT-R trial were used to establish patient-derived organoids (PDO) and for molecular analyses. MicroRNA profiling was performed on baseline bloods using the NanoString nCounter platform and results were validated by digital-droplet PCR and/or ISH in paired liquid and tissue biopsies. PDOs co-cultures and PDO-xenotransplants were generated for functional analyses., Results: Large-scale microRNA expression analysis in longitudinal matched liquid and tissue biopsies from the PROSPECT-R trial identified MIR652-3p as a biomarker of clinical benefit to regorafenib. These findings were confirmed in an independent validation cohort and in a "control" group of 100 patients treated with lonsurf. Using ex vivo co-culture assays paired with single-cell RNA-sequencing of PDO established pre- and post-treatment, we modeled regorafenib response observed in vivo and in patients, and showed that MIR652-3p controls resistance to regorafenib by impairing regorafenib-induced lethal autophagy and by orchestrating the switch from neo-angiogenesis to vessel co-option., Conclusions: Our results identify MIR652-3p as a potential biomarker and as a driver of cell and non-cell-autonomous mechanisms of resistance to regorafenib., (©2024 American Association for Cancer Research.)
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- 2024
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46. Recommendations on maximising the clinical value of tissue in the management of patients with intrahepatic cholangiocarcinoma.
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Kendall T, Overi D, Guido M, Braconi C, Banales J, Cardinale V, Gaudio E, Groot Koerkamp B, and Carpino G
- Abstract
Background & Aims: Patients with intrahepatic cholangiocarcinoma can now be managed with targeted therapies directed against specific molecular alterations. Consequently, tissue samples submitted to the pathology department must produce molecular information in addition to a diagnosis or, for resection specimens, staging information. The pathologist's role when evaluating these specimens has therefore changed to accommodate such personalised approaches., Methods: We developed recommendations and guidance for pathologists by conducting a systematic review of existing guidance to generate candidate statements followed by an international Delphi process. Fifty-nine pathologists from 28 countries in six continents rated statements mapped to all elements of the specimen pathway from receipt in the pathology department to authorisation of the final written report. A separate survey of 'end-users' of the report including surgeons, oncologists, and gastroenterologists was undertaken to evaluate what information should be included in the written report to enable appropriate patient management., Results: Forty-eight statements reached consensus for inclusion in the guidance including 10 statements about the content of the written report that also reached consensus by end-user participants. A reporting proforma to allow easy inclusion of the recommended data points was developed., Conclusions: These guiding principles and recommendations provide a framework to allow pathologists reporting on patients with intrahepatic cholangiocarcinoma to maximise the informational yield of specimens required for personalised patient management., Impact and Implications: Biopsy or resection lesional tissue from intrahepatic cholangiocarcinoma must yield information about the molecular abnormalities within the tumour that define suitability for personalised therapies in addition to a diagnosis and staging information. Here, we have developed international consensus guidance for pathologists that report such cases using a Delphi process that sought the views of both pathologists and 'end-users of pathology reports. The guide highlights the need to report cases in a way that preserves tissue for molecular testing and emphasises that reporting requires interpretation of histological characteristics within the broader clinical and radiological context. The guide will allow pathologists to report cases of intrahepatic cholangiocarcinoma in a uniform manner that maximises the value of the tissue received to facilitate optimal multidisciplinary patient management., Competing Interests: TK undertakes consultancy work for Perspectum, Clinnovate Health, Kynos Therapeutics, Fibrofind, HistoIndex, Concept Life Sciences, and Resolution Therapeutics, and has received speaker’s fees from Incyte Corporation and Servier Laboratories. JB declares research grants (from Incyte, Albireo, Cymabay), personal fees for lectures (from Incyte, AstraZeneca), and consulting roles (for Albireo Pharma, AstraZeneca, Cymabay, Ikan Biotech and OWL-Rubió Metabolomics). CB received honoraria as speaker (AstraZeneca, Incyte) and consultant (Incyte, Servier, Boehringer Ingelheim, AstraZeneca); received research funds (Avacta, Medannex, Servier) and her spouse is an employee of AstraZneca. CB is supported by a CSO research grant and CRUK Scotland Centre [grant number 100006]. VC received honoraria as speaker (Incyte, Albireo) and consultant (IPSEN); received research funds (Advanz). GC, DO, MG, BG, and EG have no conflicts of interest to declare. Please refer to the accompanying ICMJE disclosure forms for further details., (© 2024 The Authors.)
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- 2024
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47. Molecular portraits of patients with intrahepatic cholangiocarcinoma who diverge as rapid progressors or long survivors on chemotherapy.
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O'Rourke CJ, Salati M, Rae C, Carpino G, Leslie H, Pea A, Prete MG, Bonetti LR, Amato F, Montal R, Upstill-Goddard R, Nixon C, Sanchon-Sanchez P, Kunderfranco P, Sia D, Gaudio E, Overi D, Cascinu S, Hogdall D, Pugh S, Domingo E, Primrose JN, Bridgewater J, Spallanzani A, Gelsomino F, Llovet JM, Calvisi DF, Boulter L, Caputo F, Lleo A, Jamieson NB, Luppi G, Dominici M, Andersen JB, and Braconi C
- Subjects
- Humans, Animals, Mice, Gene Expression Profiling, Transcriptome, Bile Ducts, Intrahepatic metabolism, Bile Ducts, Intrahepatic pathology, Cholangiocarcinoma drug therapy, Cholangiocarcinoma genetics, Cholangiocarcinoma metabolism, Bile Duct Neoplasms drug therapy, Bile Duct Neoplasms genetics, Bile Duct Neoplasms metabolism
- Abstract
Objective: Cytotoxic agents are the cornerstone of treatment for patients with advanced intrahepatic cholangiocarcinoma (iCCA), despite heterogeneous benefit. We hypothesised that the pretreatment molecular profiles of diagnostic biopsies can predict patient benefit from chemotherapy and define molecular bases of innate chemoresistance., Design: We identified a cohort of advanced iCCA patients with comparable baseline characteristics who diverged as extreme outliers on chemotherapy (survival <6 m in rapid progressors, RP; survival >23 m in long survivors, LS). Diagnostic biopsies were characterised by digital pathology, then subjected to whole-transcriptome profiling of bulk and geospatially macrodissected tissue regions. Spatial transcriptomics of tumour-infiltrating myeloid cells was performed using targeted digital spatial profiling (GeoMx). Transcriptome signatures were evaluated in multiple cohorts of resected cancers. Signatures were also characterised using in vitro cell lines, in vivo mouse models and single cell RNA-sequencing data., Results: Pretreatment transcriptome profiles differentiated patients who would become RPs or LSs on chemotherapy. Biologically, this signature originated from altered tumour-myeloid dynamics, implicating tumour-induced immune tolerogenicity with poor response to chemotherapy. The central role of the liver microenviroment was confrmed by the association of the RPLS transcriptome signature with clinical outcome in iCCA but not extrahepatic CCA, and in liver metastasis from colorectal cancer, but not in the matched primary bowel tumours., Conclusions: The RPLS signature could be a novel metric of chemotherapy outcome in iCCA. Further development and validation of this transcriptomic signature is warranted to develop precision chemotherapy strategies in these settings., Competing Interests: Competing interests: JBA is a member of the scientific advisory board at SEALD, Norway and reports scientific consultancies for QED Therapeutics and Flagship Pioneering. JBA has received research funding from Incyte. CB received honoraria as speaker (Astrazeneca, Incyte) and consultant (Incyte, Servier, Boehringer Ingelheim, Astrazeneca), received research funds (Avacta, Medannex, Servier) and her spouse is an employee of Astrazeneca. JML is receiving research support from Eisai, Bayer HealthCare Pharmaceuticals, Ipsen, and consulting fees from Eisai, Merck, Bristol-Myers Squibb, Eli Lilly, Roche, Genentech, Ipsen, Glycotest, AstraZeneca, Bayer HealthCare Pharmaceuticals, Omega Therapeutics, Mina Alpha, Boston Scientific, Exelixis, Bluejay and Captor Therapeutics. RM has received consulting and lecture fees from Servier and Roche and travel and education funding from MSD, Eli Lilly, Bayer, Roche, Astrazeneca. AL reports receiving consulting fees from Intercept Pharma, Alfa Sigma, Takeda, and Albireo Pharma, and speakers’ fees from Gilead, Abbvie, MSD, Intercept Pharma, AlfaSigma, GSK and Incyte., (© Author(s) (or their employer(s)) 2024. Re-use permitted under CC BY. Published by BMJ.)
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- 2024
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48. The fourth COVID-19 vaccine dose increased the neutralizing antibody response against the SARS-CoV-2 Omicron (B.1.1.529) variant in a diverse Brazilian population.
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Pires Farias J, Andreata-Santos R, Dalety da Silva Brito R, Silva Souza M, Moreira Costa Fogaça M, Ramos Pinheiro J, Ferreira da Cruz E, Liang W, Simões RdC, Barros Luiz W, Birbrair A, Oliveira Vidal P, Terzi Maricato J, Torres Braconi C, Ferreira LCdS, Ramos Janini LM, and Amorim JH
- Subjects
- Humans, SARS-CoV-2 genetics, Brazil, Antibodies, Neutralizing, Antibodies, Viral, COVID-19 Vaccines, COVID-19 prevention & control
- Abstract
Importance: Several additional COVID-19 vaccine doses were administered in the Brazilian population to prevent the disease caused by the B.1.1.529 (Omicron) variant. The efficacy of a third dose as a booster is already well described. However, it is important to clarify the humoral immune response gain induced by a fourth dose. In this study, we evaluate the effect of the fourth COVID-19 vaccine dose in a diverse Brazilian population, considering a real-life context. Our study reveals that the fourth dose of the COVID-19 vaccine increased the neutralizing antibody response against SARS-CoV-2 Omicron and significantly contributed in the reduction of the disease caused by this variant., Competing Interests: The authors declare no conflict of interest.
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- 2023
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49. The rapidly evolving landscape of HCC: Selecting the optimal systemic therapy.
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Zanuso V, Rimassa L, and Braconi C
- Abstract
Over the past years, there has been a remarkable advance in the systemic treatment options for advanced HCC. The overall survival has gradually increased over time, with larger benefits for patients with sensitive tumors and preserved liver function, the latter being an essential condition for the delivery of sequential lines of treatment and optimization of clinical outcomes. With the approval of new first-line agents and the introduction of immune checkpoint inhibitor-based therapies, the treatment landscape of advanced HCC is becoming wider than ever. Atezolizumab plus bevacizumab and, more recently, durvalumab plus tremelimumab have entered the clinical practice and are the current standard of care for treatment-naïve patients, surpassing sorafenib and lenvatinib monopoly. As no head-to-head comparisons are available among all the first-line treatment options, the recommendation for the most appropriate choice and sequence is patient-driven and integrates efficacy data with clinical comorbidities, background liver disease, and the safety profile of available drugs. In addition, predictive biomarkers for successful patients' stratification are yet to be available and constitute the focus of ongoing research. The treatment algorithm is likely to become even more complex since systemic therapeutic approaches are now being translated into earlier stages of the disease, with an impact on the evolution of the sequential treatment of patients with HCC., (Copyright © 2024 American Association for the Study of Liver Diseases.)
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- 2023
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50. Lacking Immunotherapy Biomarkers for Biliary Tract Cancer: A Comprehensive Systematic Literature Review and Meta-Analysis.
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Frega G, Cossio FP, Banales JM, Cardinale V, Macias RIR, Braconi C, and Lamarca A
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- Humans, B7-H1 Antigen, Programmed Cell Death 1 Receptor, Immunotherapy, Biomarkers, Bile Ducts, Intrahepatic, Biliary Tract Neoplasms therapy, Bile Duct Neoplasms
- Abstract
Background: Immunotherapy has recently been incorporated into the spectrum of biliary tract cancer (BTC) treatment. The identification of predictive response biomarkers is essential in order to identify those patients who may benefit most from this novel treatment option. Here, we propose a systematic literature review and a meta-analysis of PD-1, PD-L1, and other immune-related biomarker expression levels in patients with BTC., Methods: Prisma guidelines were followed for this systematic review and meta-analysis. Eligible studies were searched on PubMed. Studies published between 2017 and 2022, reporting data on PD-1/PD-L1 expression and other immune-related biomarkers in patients with BTC, were considered eligible., Results: A total of 61 eligible studies were identified. Despite the great heterogeneity between 39 studies reporting data on PD-L1 expression, we found a mean PD-L1 expression percentage (by choosing the lowest cut-off per study) of 25.6% (95% CI 21.0 to 30.3) in BTCs. The mean expression percentages of PD-L1 were 27.3%, 21.3%, and 27.4% in intrahepatic cholangiocarcinomas (iCCAs-15 studies), perihilar-distal CCAs (p/dCCAs-7 studies), and gallbladder cancer (GBC-5 studies), respectively. Furthermore, 4.6% (95% CI 2.38 to 6.97) and 2.5% (95% CI 1.75 to 3.34) of BTCs could be classified as TMB-H and MSI/MMRd tumors, respectively., Conclusion: From our analysis, PD-L1 expression was found to occur approximately in 26% of BTC patients, with minimal differences based on anatomical location. TMB-H and MSI molecular phenotypes occurred less frequently. We still lack a reliable biomarker, especially in patients with mismatch-proficient tumors, and we must need to make an effort to conceive new prospective biomarker discovery studies.
- Published
- 2023
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