19 results on '"Ida A. Nissen"'
Search Results
2. The role of epidemic spreading in seizure dynamics and epilepsy surgery
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Ana P. Millán, Elisabeth C. W. van Straaten, Cornelis J. Stam, Ida A. Nissen, Sander Idema, Johannes C. Baayen, Piet Van Mieghem, and Arjan Hillebrand
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
AbstractEpilepsy surgery is the treatment of choice for drug-resistant epilepsy patients, but only leads to seizure freedom for roughly two in three patients. To address this problem, we designed a patient-specific epilepsy surgery model combining large-scale magnetoencephalography (MEG) brain networks with an epidemic spreading model. This simple model was enough to reproduce the stereo-tactical electroencephalography (SEEG) seizure propagation patterns of all patients (N = 15), when considering the resection areas (RA) as the epidemic seed. Moreover, the goodness of fit of the model predicted surgical outcome. Once adapted for each patient, the model can generate alternative hypothesis of the seizure onset zone and test different resection strategies in silico. Overall, our findings indicate that spreading models based on patient-specific MEG connectivity can be used to predict surgical outcomes, with better fit results and greater reduction on seizure propagation linked to higher likelihood of seizure freedom after surgery. Finally, we introduced a population model that can be individualized by considering only the patient-specific MEG network, and showed that it not only conserves but improves the group classification. Thus, it may pave the way to generalize this framework to patients without SEEG recordings, reduce the risk of overfitting and improve the stability of the analyses.
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- 2023
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3. Epidemic models characterize seizure propagation and the effects of epilepsy surgery in individualized brain networks based on MEG and invasive EEG recordings
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Ana P. Millán, Elisabeth C. W. van Straaten, Cornelis J. Stam, Ida A. Nissen, Sander Idema, Johannes C. Baayen, Piet Van Mieghem, and Arjan Hillebrand
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Medicine ,Science - Abstract
Abstract Epilepsy surgery is the treatment of choice for drug-resistant epilepsy patients. However, seizure-freedom is currently achieved in only 2/3 of the patients after surgery. In this study we have developed an individualized computational model based on MEG brain networks to explore seizure propagation and the efficacy of different virtual resections. Eventually, the goal is to obtain individualized models to optimize resection strategy and outcome. We have modelled seizure propagation as an epidemic process using the susceptible-infected (SI) model on individual brain networks derived from presurgical MEG. We included 10 patients who had received epilepsy surgery and for whom the surgery outcome at least one year after surgery was known. The model parameters were tuned in in order to reproduce the patient-specific seizure propagation patterns as recorded with invasive EEG. We defined a personalized search algorithm that combined structural and dynamical information to find resections that maximally decreased seizure propagation for a given resection size. The optimal resection for each patient was defined as the smallest resection leading to at least a 90% reduction in seizure propagation. The individualized model reproduced the basic aspects of seizure propagation for 9 out of 10 patients when using the resection area as the origin of epidemic spreading, and for 10 out of 10 patients with an alternative definition of the seed region. We found that, for 7 patients, the optimal resection was smaller than the resection area, and for 4 patients we also found that a resection smaller than the resection area could lead to a 100% decrease in propagation. Moreover, for two cases these alternative resections included nodes outside the resection area. Epidemic spreading models fitted with patient specific data can capture the fundamental aspects of clinically observed seizure propagation, and can be used to test virtual resections in silico. Combined with optimization algorithms, smaller or alternative resection strategies, that are individually targeted for each patient, can be determined with the ultimate goal to improve surgery outcome. MEG-based networks can provide a good approximation of structural connectivity for computational models of seizure propagation, and facilitate their clinical use.
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- 2022
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4. Optimization of epilepsy surgery through virtual resections on individual structural brain networks
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Ida A. Nissen, Ana P. Millán, Cornelis J. Stam, Elisabeth C. W. van Straaten, Linda Douw, Petra J. W. Pouwels, Sander Idema, Johannes C. Baayen, Demetrios Velis, Piet Van Mieghem, and Arjan Hillebrand
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Medicine ,Science - Abstract
Abstract The success of epilepsy surgery in patients with refractory epilepsy depends upon correct identification of the epileptogenic zone (EZ) and an optimal choice of the resection area. In this study we developed individualized computational models based upon structural brain networks to explore the impact of different virtual resections on the propagation of seizures. The propagation of seizures was modelled as an epidemic process [susceptible-infected-recovered (SIR) model] on individual structural networks derived from presurgical diffusion tensor imaging in 19 patients. The candidate connections for the virtual resection were all connections from the clinically hypothesized EZ, from which the seizures were modelled to start, to other brain areas. As a computationally feasible surrogate for the SIR model, we also removed the connections that maximally reduced the eigenvector centrality (EC) (large values indicate network hubs) of the hypothesized EZ, with a large reduction meaning a large effect. The optimal combination of connections to be removed for a maximal effect were found using simulated annealing. For comparison, the same number of connections were removed randomly, or based on measures that quantify the importance of a node or connection within the network. We found that 90% of the effect (defined as reduction of EC of the hypothesized EZ) could already be obtained by removing substantially less than 90% of the connections. Thus, a smaller, optimized, virtual resection achieved almost the same effect as the actual surgery yet at a considerably smaller cost, sparing on average 27.49% (standard deviation: 4.65%) of the connections. Furthermore, the maximally effective connections linked the hypothesized EZ to hubs. Finally, the optimized resection was equally or more effective than removal based on structural network characteristics both regarding reducing the EC of the hypothesized EZ and seizure spreading. The approach of using reduced EC as a surrogate for simulating seizure propagation can suggest more restrictive resection strategies, whilst obtaining an almost optimal effect on reducing seizure propagation, by taking into account the unique topology of individual structural brain networks of patients.
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- 2021
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- View/download PDF
5. The road ahead in clinical network neuroscience
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Linda Douw, Edwin van Dellen, Alida A. Gouw, Alessandra Griffa, Willem de Haan, Martijn van den Heuvel, Arjan Hillebrand, Piet Van Mieghem, Ida A. Nissen, Willem M. Otte, Yael D. Reijmer, Menno M. Schoonheim, Mario Senden, Elisabeth C. W. van Straaten, Betty M. Tijms, Prejaas Tewarie, and Cornelis J. Stam
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Electronic computers. Computer science ,QA75.5-76.95 - Published
- 2021
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6. Virtual localization of the seizure onset zone: Using non-invasive MEG virtual electrodes at stereo-EEG electrode locations in refractory epilepsy patients
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Erika L. Juárez-Martinez, Ida A. Nissen, Sander Idema, Demetrios N. Velis, Arjan Hillebrand, Cornelis J. Stam, and Elisabeth C.W. van Straaten
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
In some patients with medically refractory epilepsy, EEG with intracerebrally placed electrodes (stereo-electroencephalography, SEEG) is needed to locate the seizure onset zone (SOZ) for successful epilepsy surgery. SEEG has limitations and entails risk of complications because of its invasive character. Non-invasive magnetoencephalography virtual electrodes (MEG-VEs) may overcome SEEG limitations and optimize electrode placement making SOZ localization safer. Our purpose was to assess whether interictal activity measured by MEG-VEs and SEEG at identical anatomical locations were comparable, and whether MEG-VEs activity properties could determine the location of a later resected brain area (RA) as an approximation of the SOZ. We analyzed data from nine patients who underwent MEG and SEEG evaluation, and surgery for medically refractory epilepsy. MEG activity was retrospectively reconstructed using beamforming to obtain VEs at the anatomical locations corresponding to those of SEEG electrodes. Spectral, functional connectivity and functional network properties were obtained for both, MEG-VEs and SEEG time series, and their correlation and reliability were established. Based on these properties, the approximation of the SOZ was characterized by the differences between RA and non-RA (NRA). We found significant positive correlation and reliability between MEG-VEs and SEEG spectral measures (particularly in delta [0.5–4 Hz], alpha2 [10–13 Hz], and beta [13–30 Hz] bands) and broadband functional connectivity. Both modalities showed significantly slower activity and a tendency towards increased broadband functional connectivity in the RA compared to the NRA. Our findings show that spectral and functional connectivity properties of non-invasively obtained MEG-VEs match those of invasive SEEG recordings, and can characterize the SOZ. This suggests that MEG-VEs might be used for optimal SEEG planning and fewer depth electrode implantations, making the localization of the SOZ safer and more successful. Keywords: Magnetoencephalography, Virtual electrodes, Refractory epilepsy, Epilepsy surgery, Stereo-electroencephalography, Functional connectivity
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- 2018
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7. Localization of the Epileptogenic Zone Using Interictal MEG and Machine Learning in a Large Cohort of Drug-Resistant Epilepsy Patients
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Ida A. Nissen, Cornelis J. Stam, Elisabeth C. W. van Straaten, Viktor Wottschel, Jaap C. Reijneveld, Johannes C. Baayen, Philip C. de Witt Hamer, Sander Idema, Demetrios N. Velis, and Arjan Hillebrand
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magnetoencephalography ,presurgical evaluation ,functional connectivity ,refractory epilepsy ,seizure freedom ,beamforming ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Objective: Epilepsy surgery results in seizure freedom in the majority of drug-resistant patients. To improve surgery outcome we studied whether MEG metrics combined with machine learning can improve localization of the epileptogenic zone, thereby enhancing the chance of seizure freedom.Methods: Presurgical interictal MEG recordings of 94 patients (64 seizure-free >1y post-surgery) were analyzed to extract four metrics in source space: delta power, low-to-high-frequency power ratio, functional connectivity (phase lag index), and minimum spanning tree betweenness centrality. At the group level, we estimated the overlap of the resection area with the five highest values for each metric and determined whether this overlap differed between surgery outcomes. At the individual level, those metrics were used in machine learning classifiers (linear support vector machine (SVM) and random forest) to distinguish between resection and non-resection areas and between surgery outcome groups.Results: The highest values, for all metrics, overlapped with the resection area in more than half of the patients, but the overlap did not differ between surgery outcome groups. The classifiers distinguished the resection areas from non-resection areas with 59.94% accuracy (95% confidence interval: 59.67–60.22%) for SVM and 60.34% (59.98–60.71%) for random forest, but could not differentiate seizure-free from not seizure-free patients [43.77% accuracy (42.08–45.45%) for SVM and 49.03% (47.25–50.82%) for random forest].Significance: All four metrics localized the resection area but did not distinguish between surgery outcome groups, demonstrating that metrics derived from interictal MEG correspond to expert consensus based on several presurgical evaluation modalities, but do not yet localize the epileptogenic zone. Metrics should be improved such that they correspond to the resection area in seizure-free patients but not in patients with persistent seizures. It is important to test such localization strategies at an individual level, for example by using machine learning or individualized models, since surgery is individually tailored.
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- 2018
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8. Cellular Substrates of Functional Network Integration and Memory in Temporal Lobe Epilepsy
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Martin Klein, Philip C. De Witt Hamer, Fernando A. N. Santos, René Wilbers, Jeroen J. G. Geurts, Ida A. Nissen, Djai B. Heyer, Arjan Hillebrand, Huibert D. Mansvelder, Jaap C. Reijneveld, Sophie M D D Fitzsimmons, Cornelis J. Stam, Linda Douw, Johannes C. Baayen, Natalia A. Goriounova, Elisabeth C.W. van Straaten, Hunt S, Matthijs B. Verhoog, Christiaan P. J. de Kock, Amsterdam Neuroscience - Cellular & Molecular Mechanisms, Integrative Neurophysiology, Amsterdam Neuroscience - Compulsivity, Impulsivity & Attention, Amsterdam Neuroscience - Systems & Network Neuroscience, Anatomy and neurosciences, Amsterdam Neuroscience - Brain Imaging, Neurology, Amsterdam Neuroscience - Neurodegeneration, Neurosurgery, Medical psychology, and Amsterdam Neuroscience - Neuroinfection & -inflammation
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Drug Resistant Epilepsy ,cellular morphology ,Cognitive Neuroscience ,Middle temporal gyrus ,graph theory ,Temporal lobe ,Functional networks ,Epilepsy ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,medicine ,Humans ,Default mode network ,030304 developmental biology ,0303 health sciences ,medicine.diagnostic_test ,Resting state fMRI ,connectome ,Local area network ,Magnetoencephalography ,medicine.disease ,Magnetic Resonance Imaging ,Temporal Lobe ,Electrophysiology ,Epilepsy, Temporal Lobe ,action potential kinetics ,Connectome ,Centrality ,Psychology ,Functional magnetic resonance imaging ,Neuroscience ,030217 neurology & neurosurgery ,resting-state fMRI - Abstract
Temporal lobe epilepsy (TLE) patients are at risk of memory deficits, which have been linked to functional network disturbances, particularly of integration of the default mode network (DMN). However, the cellular substrates of functional network integration are unknown. We leverage a unique cross-scale dataset of drug-resistant TLE patients (n = 31), who underwent pseudo resting-state functional magnetic resonance imaging (fMRI), resting-state magnetoencephalography (MEG) and/or neuropsychological testing before neurosurgery. fMRI and MEG underwent atlas-based connectivity analyses. Functional network centrality of the lateral middle temporal gyrus, part of the DMN, was used as a measure of local network integration. Subsequently, non-pathological cortical tissue from this region was used for single cell morphological and electrophysiological patch-clamp analysis, assessing integration in terms of total dendritic length and action potential rise speed. As could be hypothesized, greater network centrality related to better memory performance. Moreover, greater network centrality correlated with more integrative properties at the cellular level across patients. We conclude that individual differences in cognitively relevant functional network integration of a DMN region are mirrored by differences in cellular integrative properties of this region in TLE patients. These findings connect previously separate scales of investigation, increasing translational insight into focal pathology and large-scale network disturbances in TLE.
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- 2022
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9. Eight topics for building a human-centric internet
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Kirstine Christensen, Jiyoung Ydun Kim, Mathias Holm Tveen, and Ida Anthonj Nissen
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Synthesis ,Topic selection ,next generation internet ,Topic guides - Abstract
This report contains the final set of topic guides identified by the NGI Forward project. The results of three consortium partners was synthesized and combined into a selection of eight topics, which are described and elaborated. This finalfinal selection of topicsreflects the common research findings and the subjects receiving the most attention from researchers, tech journalists and other stakeholder communities. The purpose of this report isto pinpoint the key issues that are significant in the development of a future internet by providing insight into internet-related subjects.
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- 2021
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10. Social media analysis with a focus on human rights on the internet
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Ida Anthonj Nissen, Marie D. Mortensen, Maris Sala, Jessica G. Walter, Marina Charquero-Ballester, Mathias H. Sørensen, Kristoffer L. Nielbo, and Anja Bechmann
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Facebook images ,internet technology ,social media ,Reddit ,next generation internet ,gender inequality ,Twitter ,algorithmic discrimination ,human rights online ,COVID-19 ,co-hashtag network ,trend detection ,Facebook groups ,privacy ,disinformation ,sentiment analysis ,topic analysis - Abstract
This report contains several analyses on social media datasets with a focus on internet technology and human rights. The main part of the report is about identifying trends in discussions on Reddit with a basis onhuman rights, and additionally it contains several deep dives into different focus areas, which constitute stand-alone smaller parts. The deep dives were chosen to highlight several of the ten key rights and principles of human rights online. They each study a specific case at the interface of human rights and internet technology. The main aim of this report was to analyze discussions on several social media platforms to identify trends and topics relevant for the next generation internet. A secondary goal was to examine social issues that accompany internet technology. We have analyzed various data sources from the platforms Reddit, Twitter, and Facebook. They have a large number of users and encompass discussions on internet technology, societal issues, news, and everyday life. In this report, we present our main analysis about detecting upcoming trends of internet technology. The analysis centers on discussions based on human values to incorporate societal aspects instead of a purely technological aspect. Additionally, we describe several deep dives into internet technology related topics and societal issues. The first deep dive is into NGI-related topics, where we identify discussed topics, investigate the emotions of those discussions, and map out the related topics. The second deep dive investigates the societal issue of gender inequality in relation to the discriminatory bias of algorithms. For the third deep dive, we look into the issue of disinformation on social media and the attached sentiments. The fourth deep dive is into privacy and whether topics determine privacy settings. Those deep dives give insight into both current discussions as well as societal issues accompanying internet technology.
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- 2021
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11. Different types of COVID-19 misinformation have different emotional valence on Twitter
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Ida A. Nissen, Anja Bechmann, Marina Charquero-Ballester, Jessica G. Walter, and Neurology
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Information Systems and Management ,Coronavirus disease 2019 (COVID-19) ,Context (language use) ,050801 communication & media studies ,Emotional valence ,Library and Information Sciences ,Affect (psychology) ,General Works ,0508 media and communications ,0502 economics and business ,Pandemic ,050602 political science & public administration ,Emotional expression ,Social media ,Misinformation ,050207 economics ,Valence (psychology) ,050208 finance ,Communication ,05 social sciences ,Sentiment analysis ,0506 political science ,Computer Science Applications ,Disinformation ,Psychology ,Social psychology ,Information Systems - Abstract
The spreading of COVID-19 misinformation on social media could have severe consequences on people's behavior. In this paper, we investigated the emotional expression of misinformation related to the COVID-19 crisis on Twitter and whether emotional valence differed depending on the type of misinformation. We collected 17,463,220 English tweets with 76 COVID-19-related hashtags for March 2020. Using Google Fact Check Explorer API we identified 226 unique COVID-19 false stories for March 2020. These were clustered into six types of misinformation (cures, virus, vaccine, politics, conspiracy theories, and other). Applying the 226 classifiers to the Twitter sample we identified 690,004 tweets. Instead of running the sentiment on all tweets we manually coded a random subset of 100 tweets for each classifier to increase the validity, reducing the dataset to 2,097 tweets. We found that only a minor part of the entire dataset was related to misinformation. Also, misinformation in general does not lean towards a certain emotional valence. However, looking at comparisons of emotional valence for different types of misinformation uncovered that misinformation related to “virus” and “conspiracy” had a more negative valence than “cures,” “vaccine,” “politics,” and “other.” Knowing from existing studies that negative misinformation spreads faster, this demonstrates that filtering for misinformation type is fruitful and indicates that a focus on “virus” and “conspiracy” could be one strategy in combating misinformation. As emotional contexts affect misinformation spreading, the knowledge about emotional valence for different types of misinformation will help to better understand the spreading and consequences of misinformation.
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- 2021
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12. Optimization of epilepsy surgery through virtual resections on individual structural brain networks
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Piet Van Mieghem, Cornelis J. Stam, Linda Douw, Petra J. W. Pouwels, Demetrios N. Velis, Ana P. Millán, Ida A. Nissen, Elisabeth C.W. van Straaten, Johannes C. Baayen, Sander Idema, Arjan Hillebrand, Neurology, Amsterdam Neuroscience - Brain Imaging, Amsterdam Neuroscience - Neurodegeneration, Amsterdam Neuroscience - Systems & Network Neuroscience, Anatomy and neurosciences, Radiology and nuclear medicine, and Neurosurgery
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Adult ,Male ,Computer science ,Science ,Article ,Neurosurgical Procedures ,Standard deviation ,Reduction (complexity) ,Young Adult ,Text mining ,Humans ,Epilepsy surgery ,Retrospective Studies ,Computational model ,Epilepsy ,Network models ,Multidisciplinary ,business.industry ,Node (networking) ,Brain ,Middle Aged ,Diffusion Tensor Imaging ,Treatment Outcome ,Computational neuroscience ,Simulated annealing ,Medicine ,Female ,business ,Algorithm ,Diffusion MRI - Abstract
BackgroundThe success of epilepsy surgery in patients with refractory epilepsy depends upon correct identification of the epileptogenic zone (EZ) and an optimal choice of the resection area. In this study we developed individualized computational models based upon structural brain networks to explore the impact of different virtual resections on the propagation of seizures.MethodsThe propagation of seizures was modelled as an epidemic process (susceptible-infected-recovered (SIR) model) on individual structural networks derived from presurgical diffusion tensor imaging (DTI) in 19 patients. The candidate connections for the virtual resection were all connections from the clinically hypothesized EZ, from which the seizures were modelled to start, to other brain areas. As a computationally feasible surrogate for the SIR model, we also removed the connections that maximally reduced the Eigenvector Centrality (EC) (large values indicate network hubs) of the hypothesized EZ, with a large reduction meaning a large effect. The optimal combination of connections to be removed for a maximal effect were found using simulated annealing. For comparison, the same number of connections were removed randomly, or based on measures that quantify the importance of a node or connection within the network.ResultsWe found that 90% of the effect (defined as reduction of EC of the hypothesized EZ) could already be obtained by removing substantially less than 90% of the connections. Thus, a smaller, optimized, virtual resection achieved almost the same effect as the actual surgery yet at a considerably smaller cost, sparing on average 27.49% (standard deviation: 4.65%) of the connections. Furthermore, the maximally effective connections linked the hypothesized EZ to hubs. Finally, the optimized resection was more effective than random removal of the same number of connections, and equally or more effective than removal based on structural network characteristics.ConclusionThe approach of using reduced EC as a surrogate for simulating seizure propagation can suggest more restrictive resection strategies, whilst obtaining an almost optimal effect on reducing seizure propagation, by taking into account the unique topology of individual structural brain networks of patients.
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- 2021
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13. Virtual localization of the seizure onset zone
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Arjan Hillebrand, Ida A. Nissen, Erika L. Juárez-Martinez, Elisabeth C.W. van Straaten, Cornelis J. Stam, Demetrios N. Velis, Sander Idema, Neurology, Neurosurgery, Amsterdam Neuroscience - Brain Imaging, and Amsterdam Neuroscience - Systems & Network Neuroscience
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Adult ,Male ,0301 basic medicine ,Drug Resistant Epilepsy ,Adolescent ,genetic structures ,Cognitive Neuroscience ,Seizure onset zone ,Electroencephalography ,lcsh:Computer applications to medicine. Medical informatics ,Brain mapping ,lcsh:RC346-429 ,Stereoelectroencephalography ,Functional connectivity ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Epilepsy surgery ,Seizures ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Ictal ,Virtual electrodes ,lcsh:Neurology. Diseases of the nervous system ,Refractory epilepsy ,Retrospective Studies ,Brain Mapping ,medicine.diagnostic_test ,business.industry ,Magnetoencephalography ,Brain ,Regular Article ,Middle Aged ,030104 developmental biology ,Neurology ,Stereo-electroencephalography ,lcsh:R858-859.7 ,Female ,Neurology (clinical) ,business ,030217 neurology & neurosurgery ,Biomedical engineering - Abstract
In some patients with medically refractory epilepsy, EEG with intracerebrally placed electrodes (stereo-electroencephalography, SEEG) is needed to locate the seizure onset zone (SOZ) for successful epilepsy surgery. SEEG has limitations and entails risk of complications because of its invasive character. Non-invasive magnetoencephalography virtual electrodes (MEG-VEs) may overcome SEEG limitations and optimize electrode placement making SOZ localization safer. Our purpose was to assess whether interictal activity measured by MEG-VEs and SEEG at identical anatomical locations were comparable, and whether MEG-VEs activity properties could determine the location of a later resected brain area (RA) as an approximation of the SOZ. We analyzed data from nine patients who underwent MEG and SEEG evaluation, and surgery for medically refractory epilepsy. MEG activity was retrospectively reconstructed using beamforming to obtain VEs at the anatomical locations corresponding to those of SEEG electrodes. Spectral, functional connectivity and functional network properties were obtained for both, MEG-VEs and SEEG time series, and their correlation and reliability were established. Based on these properties, the approximation of the SOZ was characterized by the differences between RA and non-RA (NRA). We found significant positive correlation and reliability between MEG-VEs and SEEG spectral measures (particularly in delta [0.5–4 Hz], alpha2 [10–13 Hz], and beta [13–30 Hz] bands) and broadband functional connectivity. Both modalities showed significantly slower activity and a tendency towards increased broadband functional connectivity in the RA compared to the NRA. Our findings show that spectral and functional connectivity properties of non-invasively obtained MEG-VEs match those of invasive SEEG recordings, and can characterize the SOZ. This suggests that MEG-VEs might be used for optimal SEEG planning and fewer depth electrode implantations, making the localization of the SOZ safer and more successful., Highlights • Reconstruction of resting state brain activity at specific brain locations is feasible using MEG virtual electrodes. • MEG-VE interictal activity at the stereo-EEG (SEEG) locations correlates well with SEEG activity. • MEG-VE and SEEG activity in the resected area was slower than in the non-resected area in epilepsy surgery patients. • MEG-VE may be used in optimization of the SEEG electrode planning. • MEG-VEs evaluation could make the localization of the seizure onset zone safer.
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- 2018
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14. An evaluation of kurtosis beamforming in magnetoencephalography to localize the epileptogenic zone in drug resistant epilepsy patients
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Ida A. Nissen, Michael B.H. Hall, Elaine Foley, Arjan Hillebrand, Caroline Witton, Elisabeth C.W. van Straaten, Stefano Seri, Paul L. Furlong, Neurology, Amsterdam Neuroscience - Brain Imaging, and NCA - Brain imaging technology
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Male ,Drug Resistant Epilepsy ,ECD, equivalent current dipole ,genetic structures ,Epilepsy ,0302 clinical medicine ,iEEG, intracranial EEG ,Brain Mapping ,MEG ,medicine.diagnostic_test ,05 social sciences ,Brain ,Magnetoencephalography ,Middle Aged ,Epileptogenic zone ,Sensory Systems ,3. Good health ,medicine.anatomical_structure ,Neurology ,Kurtosis ,Adult ,Beamforming ,Neuroimaging ,tSSS, temporal signal space separation ,Article ,050105 experimental psychology ,Young Adult ,03 medical and health sciences ,Seizures ,Physiology (medical) ,medicine ,Humans ,0501 psychology and cognitive sciences ,Retrospective Studies ,EZ, epileptogenic zone ,business.industry ,MEG, magnetoencephalography ,medicine.disease ,Lobe ,Neurology (clinical) ,Nuclear medicine ,business ,MRI, magnetic resonance imaging ,030217 neurology & neurosurgery - Abstract
Highlights • Objective localizations of interictal spikes using a kurtosis beamformer. • Kurtosis Beamforming can provide confidence to scattered dipoles. • Kurtosis beamforming can assist in localizing the epileptogenic zone., Objective Kurtosis beamforming is a useful technique for analysing magnetoencephalograpy (MEG) data containing epileptic spikes. However, the implementation varies and few studies measure concordance with subsequently resected areas. We evaluated kurtosis beamforming as a means of localizing spikes in drug-resistant epilepsy patients. Methods We retrospectively applied kurtosis beamforming to MEG recordings of 22 epilepsy patients that had previously been analysed using equivalent current dipole (ECD) fitting. Virtual electrodes were placed in the kurtosis volumetric peaks and visually inspected to select a candidate source. The candidate sources were compared to the ECD localizations and resection areas. Results The kurtosis beamformer produced interpretable localizations in 18/22 patients, of which the candidate source coincided with the resection lobe in 9/13 seizure-free patients and in 3/5 patients with persistent seizures. The sublobar accuracy of the kurtosis beamformer with respect to the resection zone was higher than ECD (56% and 50%, respectively), however, ECD resulted in a higher lobar accuracy (75%, 67%). Conclusions Kurtosis beamforming may provide additional value when spikes are not clearly discernible on the sensors and support ECD localizations when dipoles are scattered. Significance Kurtosis beamforming should be integrated with existing clinical protocols to assist in localizing the epileptogenic zone.
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- 2018
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15. Detecting epileptiform activity from deeper brain regions in spatially filtered MEG data
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B.W. van Dijk, Arjan Hillebrand, Cornelis J. Stam, Ida A. Nissen, H.E. Ronner, I. Ris-Hilgersom, N.C.G. Sijsma, Neurology, Amsterdam Neuroscience - Brain Imaging, and Physics and medical technology
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medicine.diagnostic_test ,business.industry ,05 social sciences ,Hippocampus ,Magnetoencephalography ,Drug Resistant Epilepsy ,medicine.disease ,050105 experimental psychology ,Sensory Systems ,03 medical and health sciences ,Epilepsy ,0302 clinical medicine ,Text mining ,Neurology ,Physiology (medical) ,Medicine ,0501 psychology and cognitive sciences ,Neurology (clinical) ,business ,Neuroscience ,030217 neurology & neurosurgery - Published
- 2016
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16. Effects of Reusing Baseline Volumes of Interest by Applying (Non-)Rigid Image Registration on Positron Emission Tomography Response Assessments
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Floris H. P. van Velden, Linda M. Velasquez, Ida A. Nissen, Otto S. Hoekstra, Ronald Boellaard, Wendy Hayes, Radiology and nuclear medicine, Neurology, and CCA - Disease profiling
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medicine.medical_specialty ,Drugs and Devices ,Medical Physics ,Treatment outcome ,PET imaging ,Image registration ,lcsh:Medicine ,Computed tomography ,Medical Devices ,Diagnostic Medicine ,medicine ,Pathology ,Cancer Detection and Diagnosis ,Humans ,Medical physics ,Baseline (configuration management) ,lcsh:Science ,Gastrointestinal Neoplasms ,Multidisciplinary ,medicine.diagnostic_test ,business.industry ,Physics ,lcsh:R ,Reproducibility of Results ,Pattern recognition ,Cancer treatment ,Pulmonary imaging ,Treatment Outcome ,Oncology ,Positron emission tomography ,Positron-Emission Tomography ,Nuclear medicine ,Medicine ,lcsh:Q ,Artificial intelligence ,business ,Radiology ,Research Article ,Test Evaluation - Abstract
OBJECTIVES: Reusing baseline volumes of interest (VOI) by applying non-rigid and to some extent (local) rigid image registration showed good test-retest variability similar to delineating VOI on both scans individually. The aim of the present study was to compare response assessments and classifications based on various types of image registration with those based on (semi)-automatic tumour delineation. METHODS: Baseline (n = 13), early (n = 12) and late (n = 9) response (after one and three cycles of treatment, respectively) whole body [(18)F]fluoro-2-deoxy-D-glucose positron emission tomography/computed tomography (PET/CT) scans were acquired in subjects with advanced gastrointestinal malignancies. Lesions were identified for early and late response scans. VOI were drawn independently on all scans using an adaptive 50% threshold method (A50). In addition, various types of (non-)rigid image registration were applied to PET and/or CT images, after which baseline VOI were projected onto response scans. Response was classified using PET Response Criteria in Solid Tumors for maximum standardized uptake value (SUV(max)), average SUV (SUV(mean)), peak SUV (SUV(peak)), metabolically active tumour volume (MATV), total lesion glycolysis (TLG) and the area under a cumulative SUV-volume histogram curve (AUC). RESULTS: Non-rigid PET-based registration and non-rigid CT-based registration followed by non-rigid PET-based registration (CTPET) did not show differences in response classifications compared to A50 for SUV(max) and SUV(peak), however, differences were observed for MATV, SUV(mean), TLG and AUC. For the latter, these registrations demonstrated a poorer performance for small lung lesions (
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- 2014
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17. Brain areas with epileptic high frequency oscillations are functionally isolated in MEG virtual electrode networks
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Maeike Zijlmans, Ida A. Nissen, Cornelis J. Stam, Arjan Hillebrand, Nicole E.C. van Klink, Neurology, and Amsterdam Neuroscience - Brain Imaging
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Adult ,0301 basic medicine ,Adolescent ,Clinical Neurology ,Sensory system ,High frequency oscillations ,03 medical and health sciences ,0302 clinical medicine ,Eloquent cortex ,Betweenness centrality ,Physiology (medical) ,Journal Article ,Humans ,Ictal ,Epileptogenic zone ,Child ,Epilepsy ,MEG ,Functional connectivity ,Network hub ,Brain ,Magnetoencephalography ,Beamformer virtual electrodes ,Brain Waves ,Phase lag ,Sensory Systems ,Irritative zone ,030104 developmental biology ,Neurology ,Neurology (clinical) ,Centrality ,Psychology ,Neuroscience ,030217 neurology & neurosurgery - Abstract
OBJECTIVE: Previous studies have associated network hubs and epileptiform activity, such as spikes and high frequency oscillations (HFOs), with the epileptogenic zone. The epileptogenic zone is approximated by the area that generates interictal epileptiform activity: the irritative zone. Our aim was to determine the relation between network hubs and the irritative zone.METHODS: Interictal resting-state MEG recordings of 12 patients with refractory epilepsy were analysed. Beamformer-based virtual electrodes were calculated at 70 locations around the epileptic spikes (irritative zone) and in the contralateral hemisphere. Spikes and HFOs were marked in all virtual electrodes. A minimum spanning tree network was generated based on functional connectivity (phase lag index; PLI) between all virtual electrodes to calculate the betweenness centrality, an indicator of hub status of network nodes.RESULTS: Betweenness centrality was low, and PLI was high, in virtual electrodes close to the centre of the irritative zone, and in virtual electrodes with many spikes and HFOs.CONCLUSION: Node centrality increases with distance from brain areas with spikes and HFOs, consistent with the idea that the irritative zone is a functionally isolated part of the epileptic network during the interictal state.SIGNIFICANCE: A new hypothesis about a pathological hub located remotely from the irritative zone and seizure onset zone opens new ways for surgery when epileptogenic areas and eloquent cortex coincide.
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- 2016
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18. Emotions on Twitter as crisis imprint in high-trust societies: Do ambient affiliations affect emotional expression during the pandemic?
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Marina Charquero-Ballester, Jessica Gabriele Walter, Astrid Sletten Rybner, Ida Anthonj Nissen, Kenneth Christian Enevoldsen, and Anja Bechmann
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Medicine ,Science - Published
- 2024
19. Different types of COVID-19 misinformation have different emotional valence on Twitter
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Marina Charquero-Ballester, Jessica G Walter, Ida A Nissen, and Anja Bechmann
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General Works - Abstract
The spreading of COVID-19 misinformation on social media could have severe consequences on people's behavior. In this paper, we investigated the emotional expression of misinformation related to the COVID-19 crisis on Twitter and whether emotional valence differed depending on the type of misinformation. We collected 17,463,220 English tweets with 76 COVID-19-related hashtags for March 2020. Using Google Fact Check Explorer API we identified 226 unique COVID-19 false stories for March 2020. These were clustered into six types of misinformation (cures, virus, vaccine, politics, conspiracy theories, and other). Applying the 226 classifiers to the Twitter sample we identified 690,004 tweets. Instead of running the sentiment on all tweets we manually coded a random subset of 100 tweets for each classifier to increase the validity, reducing the dataset to 2,097 tweets. We found that only a minor part of the entire dataset was related to misinformation. Also, misinformation in general does not lean towards a certain emotional valence. However, looking at comparisons of emotional valence for different types of misinformation uncovered that misinformation related to “virus” and “conspiracy” had a more negative valence than “cures,” “vaccine,” “politics,” and “other.” Knowing from existing studies that negative misinformation spreads faster, this demonstrates that filtering for misinformation type is fruitful and indicates that a focus on “virus” and “conspiracy” could be one strategy in combating misinformation. As emotional contexts affect misinformation spreading, the knowledge about emotional valence for different types of misinformation will help to better understand the spreading and consequences of misinformation.
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- 2021
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