98 results on '"Ketzer J"'
Search Results
2. Standardization of radiograph readings during bowel management week
- Author
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Bischoff, A., Hayes, K., Guimaraes, C., Merritt, A., Wickham, M., Schneider, L., Martin, H., Ketzer, J., Rodriguez, V., Peña, A., and De La Torre, L.
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- 2023
- Full Text
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3. Do adult patients with congenital colorectal conditions know their diagnosis?
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Vargas, M. C., Wehrli, L. A., Louiselle, A., Ketzer, J., Reppucci, M. L., Juddy-Glossy, L., Alaniz, V. I., Wilcox, D. T., Wood, D. N., Peña, A., De La Torre, L., and Bischoff, A.
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- 2022
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4. “Incisionless” colostomy creation: A case series
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Melkonian, V., Torre, L. de la, Ketzer, J., Rodriguez, V., Pena, A., and Bischoff, A.
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- 2024
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5. CO2 sequestration potential of Charqueadas coal field in Brazil
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Santarosa, Cristian S., Crandall, Dustin, Haljasmaa, Igor V., Hur, Tae-Bong, Fazio, James J., Warzinski, Robert P., Heemann, Roberto, Ketzer, J. Marcelo M., and Romanov, Vyacheslav N.
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- 2013
- Full Text
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6. Gas hydrates, fluid venting and slope stability on the upper Amazon deep-sea fan
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Praeg, D., Silva, C, Reis, A, Ketzer, J-M, Migeon, S, Unnithan, Vikram, Perovano, Rodrigo, Cruz, Alberto, Gorini, Christian, Universidade Federal Fluminense [Rio de Janeiro] (UFF), Pontificia Universidade Catolica do Rio Grande do Sul (PUCRS), Géoazur (GEOAZUR 7329), Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire de la Côte d'Azur, COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Universidade do Estado do Rio de Janeiro [Rio de Janeiro] (UERJ), Linnaeus University, Jacobs University [Bremen], Sorbonne Université (SU), Institut des Sciences de la Terre de Paris (iSTeP), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), The European Union’s Horizon 2020 research and innovation programme under Marie Skłodowska-Curie grant agreement No. 656821 (2016-2018, 2019-2020), and a Brazilian Visiting Foreign Researcher Fellowship (PVE CAPES Édital IODP 38/2014) at Universidade Federal Fluminense (2018-2019)., Programa de Geologia e Geofísica Marinha (PGGM), EC SEAGAS (656821), European Project: 656821,H2020,H2020-MSCA-IF-2014,SEAGAS(2016), Université Côte d'Azur (UCA)-Université Côte d'Azur (UCA)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Linnéuniversitetet, Sweden, Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC), Daniel, Praeg, and Multi-disciplinary Comparison of Fluid Venting from Gas Hydrate Systems on the Mediterranean and Brazilian Continental Margins over Glacial-Interglacial Timescales - SEAGAS - - H20202016-04-30 - 2019-04-29 - 656821 - VALID
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[SDE] Environmental Sciences ,[SDE]Environmental Sciences ,[SDE.ES] Environmental Sciences/Environmental and Society ,[SDE.ES]Environmental Sciences/Environmental and Society - Abstract
International audience; Gas hydrates are ice-like compounds of water and volatiles (mainly methane) that are stable in deep-sea sediments due to high pressures and low temperatures. Changes in oceanographic conditions that reduce their stability field (e.g. sea level lowering, bottom water warming) have been suggested to trigger continental slope failures. The Amazon deep-sea fan is a major Plio-Quaternary depocentre associated with large-scale slope instabilities, in which the presence of gas hydrates has been reported from a discontinuous bottom simulating reflection (BSR) on the upper slope. Reductions in gas hydrate stability during lowered sea levels have been argued to trigger megaslides from the upper fan; megaslides have also been linked to tectonism within an extension- compression system on the upper fan recording its collapse above deep detachments. Here we present the first systematic mapping of the Amazon fan BSR using a regional grid of 2D/3D seismic reflection data, and argue the results to provide evidence for stability zone changes driven from below by fluid upwelling. The BSR is seen to extend over an area of at least 6800 km2 as elongate patches up to 10s km wide and >100 km long that coincide with the crests of thrust-fold anticlines. The BSR patches lie within 300 m of seafloor, in places rising beneath seafloor features that 3D seismic imagery show to be pockmarks and mud volcanoes. The BSRs are shallower than the methane hydrate stability zone calculated using regional datasets, and inversion of depths to temperatures yields spatially variable gradients up to 10 times background values in well data from the fan. We interpret the elevated BSR patches to record the upwelling of warm, gas-rich fluids via the thrust-folds. We propose that changes in heat flux due to episodic fluid flow, notably during fault movements, will result in gas hydrate dissociation to reduce pore pressures at the base of the stability zone. This mechanism could account for recurrent large-scale failures from the upper Amazon fan during its Plio-Quaternary collapse. Our model of 'bottom-up' gas hydrate dynamics driven by fluid migration is applicable to collapsing passive margin depocentres worldwide, and is independent of 'top-down' changes in gas hydrate stability due to climate-driven changes in ocean conditions.
- Published
- 2018
7. Targeting the PI3K-and MAPK pathway in high grade leiomyosarcoma
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Knospe, S., Grunewald, S., Mühlenberg, Thomas, Christoff, M., Ketzer, J., Fletcher, J., and Bauer, Sebastian
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Medizin ,ComputingMethodologies_GENERAL - Abstract
Poster-Abstract
- Published
- 2018
8. BSRs Elevated by Fluid Upwelling on the Upper Amazon Fan : Bottom-up Controls on Gas Hydrate Stability
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Praeg, Daniel, Silva, Cleverson, Perovano, Rodrigo, dos Reis, Antonio, Ketzer, J. M., Unnithan, Vikram, Perovano Da Silva, R. J., Cruz, Alberto, Gorini, Christian, Géoazur (GEOAZUR 7329), Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire de la Côte d'Azur, Université Côte d'Azur (UCA)-Université Côte d'Azur (UCA)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Pontifícia Universidade Católica do Rio Grande do Sul [Porto Alegre] (PUCRS), Universidade Federal Fluminense [Rio de Janeiro] (UFF), Universidade do Estado do Rio de Janeiro [Rio de Janeiro] (UERJ), Jacobs University [Bremen], Université Pierre et Marie Curie - Paris 6 (UPMC), Institut des Sciences de la Terre de Paris (iSTeP), Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC), European Union’s Horizon 2020 research and innovation programme under Marie Skłodowska-Curie grant agreement No. 656821, EC SEAGAS (656821), European Project: 656821,H2020,H2020-MSCA-IF-2014,SEAGAS(2016), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Pontifical Catholic University of Rio Grande do Sul (PUC-RS), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Université Côte d'Azur (UCA)-Institut national des sciences de l'Univers (INSU - CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Observatoire de la Côte d'Azur, and Université Côte d'Azur (UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)
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continental slope processes ,[SDE]Environmental Sciences ,marine geology and geophysics ,gas and hydrate systems ,[SDE.ES]Environmental Sciences/Environmental and Society - Abstract
International audience; The stability of natural gas hydrate accumulations on continental margins has mainly been considered in terms of changes in seawater pressures and temperatures driven from above by climate. We present evidence from the Amazon deep-sea fan for stability zone changes driven from below by fluid upwelling. A grid of 2D and 3D multichannel seismic data show the upper Amazon fan in water depths of 12002000 m to contain a discontinuous bottom simulating seismic reflection (BSR) that forms 'patches' 1050 km wide and up to 140 km long, over a total area of at least 5000 km. The elongate BSR patches coincide with anticlinal thrust-folds that record ongoing gravitational collapse of the fan above décollements at depths of up to 10 km. The BSR lies within 100300 m of seafloor, in places rising beneath features that seafloor imagery show to be pockmarks and mud volcanoes, some venting gas to the water column. The BSR patches are up to 500 m shallower than predicted for methane hydrate based on geothermal gradients as low as 17˚C/km measured within the upper fan, and inversion of the BSR to obtain temperatures at the phase boundary indicates gradients 25 times background levels. We interpret the strongly elevated BSR patches to record upwelling of warm gas-rich fluids through thrust-fault zones 10 km wide. We infer this process to favour gas hydrate occurrences that are concentrated in proportion to flux and locally pierced by vents, and that will be sensitive to temporal variations in the upward flux of heat and gas. Thus episodes of increased flux, e.g. during thrusting, could dissociate gas hydrates to trigger slope failures and/or enhanced gas venting to the ocean. Structurally-driven fluid flow episodes could account for evidence of recurrent large-scale failures from the compressive belt on the upper fan during its Neogene collapse, and provide a long-term alternative to sea level triggering. The proposed mechanism of upward flux links the distribution and stability of gas hydrate occurrences (and gas vents) to the internal dynamics of deep-sea depocentres, in all water depths that structural pathways for fluid migration may form. Gravitational collapse is increasingly recognized to affect passive continental margins, and our findings challenge global models of hydrate inventory over time based solely on in situ methanogenesis.
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- 2017
9. Carbon leakage from the deep sea
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Ketzer, J, Praeg, D, Augustin, A, Rodrigues, F, Oliveira, R, Pivel, M, Reis, A, Silva, C, Leonel, B, Pontifícia Universidade Católica do Rio Grande do Sul [Porto Alegre] (PUCRS), Géoazur (GEOAZUR 7329), Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire de la Côte d'Azur, Université Côte d'Azur (UCA)-Université Côte d'Azur (UCA)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Universidade Federal do Rio Grande do Sul [Porto Alegre] (UFRGS), Universidade do Estado do Rio de Janeiro [Rio de Janeiro] (UERJ), Universidade Federal Fluminense [Rio de Janeiro] (UFF), Seaseep Dados de Petróleo, Rio de Janeiro, Brazil, H2020-MSCA-IF-2014-GF-656821, EC SEAGAS (656821), Université Côte d'Azur (UCA)-Institut national des sciences de l'Univers (INSU - CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Observatoire de la Côte d'Azur, and Université Côte d'Azur (UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)
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[SDE.MCG]Environmental Sciences/Global Changes ,[SDE]Environmental Sciences ,[SDE.ES]Environmental Sciences/Environmental and Society - Abstract
International audience; Marine sediments store large quantities of organic carbon derived both from the drainage basins of rivers on land and from life in the oceans. The Amazon is the world's largest river, from which sediment supply to the Atlantic Ocean has resulted over the last millions of years in the build-up of a vast deep-sea fan up to 10 km thick. Since the last glacial maximum (ca. 24,000 years before present), the fan has accumulated a mass of organic carbon comparable to that contained in the presentday Amazon Forest. Over geological timescales, the process of sedimentary burial in the Amazon and other marine depocentres sequesters organic carbon, but also allows microbial methanogenesis to convert some of it to mobile methane. Methane moving through sediments may be oxidized and converted into CO2, trapped as dissolved or free gas or, where stability conditions permit (in water depths greater than 500 m), as gas hydrates. Reservoirs of gas hydrates are favoured by high sedimentation rates, and it has been suggested that the Amazon and other rapidly deposited deep-sea fans are net carbon sinks. Here we present evidence that carbon stored in and beneath gas hydrates is escaping to the ocean through seafloor venting features. The distribution of these features suggests them to form along faults created by the gravitational collapse of the fan, and along the upper limit of the gas hydrate stability zone in response to changes in pressure (depth) and/or temperatures influenced by climate. Our findings support recent studies suggesting that seafloor gas venting in deep-sea settings where gas hydrates are stable is a more widespread phenomenon than previously recognised, suggesting estimates of global methane emissions to be conservative. A more accurate knowledge of seafloor methane emissions is thus of paramount importance for our understanding of the effects of ongoing climate-driven changes on ocean processes, as well as for the effective management of marine resources.
- Published
- 2017
10. Large-scale mass-transport deposits: a major architectural element in the Cenozoic sedimentary construction of the offshore Amazon basin, Brazilian equatorial Atlantic
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Reis, A, Silva, C, Gorini, C, Perovano, R, Cruz, A, Praeg, D, Ketzer, J, Albuquerque, N, Universidade do Estado do Rio de Janeiro [Rio de Janeiro] (UERJ), EC SEAGAS (656821), and European Project: 656821,H2020,H2020-MSCA-IF-2014,SEAGAS(2016)
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Triggering mechanisms ,Geohazards ,[SDE]Environmental Sciences ,[SDE.ES]Environmental Sciences/Environmental and Society ,Submarine megaslides - Abstract
International audience; Numerous geological-geophysical studies carried out across the Amazon offshore basin (Foz do Amazonas marginal basin), Brazilian Equatorial Atlantic, identified the occurrence of large-scale mass-transport deposits (MTDs). These studies, based mainly on analyses of acoustic imagery, include those of the Brazilian Continental Shelf Survey Programme (LEPLAC) and the more recent CAPES-IODP project "Stratigraphic and structural Cenozoic evolution of the Foz do Amazonas basin: a coupling system between depositional, gravitational and fluid migration processes"-a collaboration project between UFF, UERJ, PUC-RS and foreign universities. Such studies evidence that the occurrence of large-scale slope instabilities has been pervasive across the entire margin spanning the late Miocene to Modern. MTDs all together attain a total area of nearly 315,000 km² and involve a total volume of allochthonous masses of ~128,000 km³, constituting thus essential architectural elements for the margin sedimentary construction. MTDs can be grouped into three main gigantic regional megaslide complexes (MTCs) spreading downslope off the NW, the Central and the SE slope settings of the basin, respectively: the northwestern Amapá Complex, the Central Amazon Fan Complex and the southeastern Pará-Maranhão Complex. In each MTC, individual MTDs can mobilize up to kilometre-thick sedimentary series as allochthonous masses with distinct flow directions, degrees of sediment disruption and internal coherence, attaining dimensions comparable to the world's largest megaslides. Allochthonous masses can spread either as frontly-confined or as unconfined sediment slides, depending on the region or the stratigraphic interval considered. Unconfined MTDs can present internal seismic facies indicative of large downslope modification of their original stratification, varying from upslope slide and/or slumped blocks to dominant downslope debris flows, suggesting that these MTDs may have been generated by sudden catastrophic events. On the other hand, kilometre-thick frontly-confined masses, reflected by frontal imbricate thrusts as wide as 50 km, normally involve higher remobilized sediment volumes, probably as a result of multiphase slope failures which may have encompassed a large time span and progressively incremental volumes of eroded sediments. Active gravity tectonics is assumed to be one of the major preconditioning factors inducing slope failures across the offshore Amazon basin, since the main upslope slide scars seem likely to have been initiated by movements of gravity-related structures. However, a variety of other preconditioning causes for submarine mass-wasting process are also present across this margin, such as rapid sediment accumulation in the head area of the slide complexes, together with destabilization of gas hydrates. In this realm, the Amazon offshore basin stands thus as an excellent site for the investigation of preconditioning factors that generate an excess of pore pressure conditions able to trigger the initiation of submarine gravity-driven depositional processes in passive margin settings.
- Published
- 2016
11. Reducing Greenhouse Gas Emissions with CO2 Capture and Geological Storage.
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Ketzer, J. Marcelo, Iglesias, Rodrigo S., and Einloft, Sandra
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- 2017
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12. Characterization and modeling of CO2‐water‐rock interactions in Hygiene Sandstones (Upper Cretaceous), Denver Basin, aimed for carbon dioxide geological storage.
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Iglesias, Rodrigo S., Ketzer, J. Marcelo, Maraschin, Anderson J., and Sbrissa, Gesiane
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GEOLOGICAL formations ,STRATIGRAPHIC geology ,CARBON dioxide ,HYGIENE products ,SIDERITE - Abstract
Abstract: Carbon capture and geological storage are among the most valuable technologies capable of reducing CO
2 emissions. Long‐term interactions between CO2 and a reservoir, and the integrity of geological formations, are key factors in the selection of adequate reservoirs for permanent storage. Numerical models of CO2 ‐water‐rock geochemical interactions are often employed to predict the fate of CO2 stored in a reservoir over time. The Hygiene Sandstone, in the Denver Basin, Colorado, USA, is a geological formation with potential for CO2 storage, and was therefore studied in this work, in which we collected and characterized outcrop samples in order to supply the input parameters for numerical simulations. Four representative thin sections of Hygiene Sandstone outcrops were quantified in terms of detrital constituents, diagenesis, and porosity on the basis of conventional petrography. Sandstone mineralogy included, in decreasing order, quartz, K‐feldspar, muscovite, albite, illite, smectite, kaolinite, poikilotopic calcite, and siderite. Porosity ranged from 4% to 13%. A geochemical modeling study of CO2 ‐water‐rock interactions performed with two characterized samples and brine data from the Hygiene Sandstones, simulating reservoir conditions, suggested that the mineralogy of the sandstone is quite stable under the conditions that were tested and only minor mineralogical and porosity alterations would occur within a thousand years of storage. © 2018 Society of Chemical Industry and John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]- Published
- 2018
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13. Carbon dioxide injection in carbonate reservoirs - a review of CO2-water-rock interaction studies.
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Siqueira, Tiago A., Iglesias, Rodrigo S., and Ketzer, J. Marcelo
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CARBON dioxide ,ENHANCED oil recovery ,SILICICLASTIC rocks ,NATURAL gas prospecting ,PETROLEUM prospecting - Abstract
Carbon dioxide injection in geological formations is currently a common procedure in several reservoirs worldwide. More recently, it has been considered a permanent storage solution, avoiding emission to the atmosphere from large industrial sources. Also, it is largely employed in the oil & gas exploration industry, for enhanced oil recovery (EOR) operations. However, it is a known fact that injection of large amounts of CO
2 into geological reservoirs may lead to a series of alterations due to chemical and physical interactions with minerals and fluids, especially in carbonate or carbonate-rich reservoirs. Experimental and numerical models have been employed in many studies in the past, to investigate these effects on the geological environment. So far, most of these studies focused on siliciclastic formations, whereas carbonate reservoirs, which are known to be much more chemically reactive when interacting with CO2 , were much less investigated. We present a review of experimental and numerical models that have been employed for studying CO2 -water-rock interactions, and their application to the investigation of the impact in carbonate reservoir quality and integrity caused by the injection of carbon dioxide. © 2017 Society of Chemical Industry and John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]- Published
- 2017
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14. P1232: PRINCIPLES OF PRECISION ONCOLOGY IN PRIMARY REFRACTORY HIGH‐GRADE B‐CELL LYMPHOMA WITH MYC‐, BCL2 AND/OR BCL6 REARRANGEMENTS (HGBL‐DH/TH)
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Witte, H., Faehnrich, A., Riedl, J., Kuenstner, A., Ketzer, J., von Bubnoff, N., Merz, H., Busch, H., Feller, A., and Gebauer, N.
- Published
- 2022
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15. Carbon capture and geological storage in Brazil: an overview.
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Iglesias, Rodrigo S., Ketzer, J. Marcelo, Melo, Clarissa L., Heemann, Roberto, and Machado, Claudia X.
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CARBON sequestration ,GEOLOGICAL carbon sequestration ,COALBED methane ,SALT deposits - Abstract
Brazil is recognized for possessing a low carbon-intensive energy matrix, with most of its power being generated from hydroelectricity. Its greenhouse gas emissions profile is dominated by deforestation and land-use change. Despite this characteristic, the country has been committed to the development of carbon capture and geological storage (CCS) research since this technology started to be recognized as a relevant solution for greenhouse gas emission reductions. This development has gained attention recently owing to the beginning of the production of pre-salt reservoirs, which may contain significant amounts of CO
2 in the produced fluids. The work has been carried out mostly through the efforts of the academia and industrial enterprises. This paper presents a summary and a brief description of the recent activities being carried out by these sectors, aiming to develop and promote CCS in Brazil. [ABSTRACT FROM AUTHOR]- Published
- 2015
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16. Reducing Greenhouse Gas Emissions with CO2 Capture and Geological Storage.
- Author
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Ketzer, J. Marcelo, Iglesias, Rodrigo S., and Einloft, Sandra
- Published
- 2012
- Full Text
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17. Assessing the risks of geological storage of CO2 in mature oil fields
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Le Gallo, Yann, Marcelo Ketzer, J., and Carpentier, Bernard
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- 2005
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18. RESERVOIR QUALITY ASSESSMENT AND PETROFACIES OF THE LOWER CRETACEOUS SILICICLASTIC, CARBONATE AND HYBRID ARENITES FROM THE JEQUITINHONHA BASIN, EASTERN BRAZIL.
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Jardim, C. M., De Ros, L. F., and Ketzer, J. M.
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SEQUENCE stratigraphy ,DIAGENESIS ,RESERVOIRS ,PETROLEUM prospecting ,GEOLOGICAL basins - Abstract
A study of the rift to early drift phase, fluvial, deltaic and shallow-marine Lower Cretaceous (Upper Aptian to Lower Albian) siliciclastic sandstones, hybrid arenites and calcarenites from the Jequitinhonha Basin, eastern Brazilian margin, has shown that the distribution of diagenetic alterations and of related reservoir quality evolution can be constrained within a sequence stratigraphic framework. Description of cores, wireline logs, thin sections and petrophysical (porosity and permeability) analyses were integrated in order to investigate the controls on patterns of diagenesis in these rocks, and hence of reservoir quality distribution. The results of this study will be relevant to the exploration of rift and early drift successions in Atlantic-type passive margin settings. The study suggests that depositional facies and detrital composition impact the diagenetic evolution and the characterization and prediction of reservoir quality. Reservoir quality assessment was based on the concept of reservoir petrofacies, which is defined in terms of the main attributes affecting reservoir quality including depositional structures, textures, primary composition, diagenetic processes and products, and pore types. This paper demonstrates the practical use of the reservoir petrofacies concept in the evaluation of the controls on porosity and permeability, as well as on seismic and log signatures. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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19. IMPACT OF DIAGENESIS ON RESERVOIR-QUALITY EVOLUTION IN FLUVIAL AND LACUSTRINE-DELTAIC SANDSTONES: EVIDENCE FROM JURASSIC AND TRIASSIC SANDSTONES FROM THE ORDOS BASIN, CHINA.
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Luo, J. L., Morad, S., Salem, A., Ketzer, J. M., Lei, X. L., Guo, D. Y., and Hlal, O.
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PETROLEUM geology ,GEOLOGY ,SANDSTONE - Abstract
The reservoir quality of Jurassic and Triassic fluvial and lacustrine-deltaic sandstones in the intracratonic Ordos Basin is strongly influenced by depositional facies and various types of diagenetic modifications. The fluvial sandstones have higher average He-porosity and permeability (14.8% and 12.7 mD, respectively) than the deltaic sandstones (9.8% and 5.8 mD, respectively). In addition to extensive mechanical compaction, eodiagenesis (220–97 Ma; depth < 2000 m; T < 70°C) has resulted in dissolution and kaolinitization of detrital silicates in the Jurassic fluvial sandstones, and in smectite infiltration and minor cementation by calcite and siderite in the Triassic fluvial and deltaic sandstones. Pervasive eogenetic carbonate cementation (> 20 vol.%) occurred in Triassic deltaic siltstones and very fine-grained sandstones which are closely associated with organic-rich mudstones. Mesodiagenesis (97–65 Ma), which occurred during rapid subsidence to depths of 3700–4400 m, resulted in the albitization of plagioclase, checmical compaction, the conversion of kaolinite into dickite, and cementation by quartz overgrowths, chlorite, illite, ankerite (δ
13 CVPDB =−2.4‰ to +2.6‰; δ18 OVPDB =−21.5‰ to −10‰) and calcite (δ13 CVPDB =−4.7‰ to +3.7‰; δ18 OVPDB =−21.8‰ to −13.4‰). Oil emplacement (95 Ma) retarded cementation by mesogenetic quartz and carbonate but had little influence on dickite, illite and chlorite formation. Retardation of quartz cementation was also due to the presence of chlorite fringes around detrital quartz grains. Dickitization of eogenetic kaolinite together with the short residence time at maximum burial temperatures (105–124°C) has retarded the albitization of K-feldspars and illite formation and hence prevented severe permeability destruction. Telodiagenesis, which occurred after uplift (Eocene to end-Neogene), caused slight dissolution and kaolinitization of feldspars. This study demonstrates that despite complex patterns of diagenetic modifications in the Triassic and Jurassic successions, depositional porosity and permeability are better preserved in fluvial meandering channel sandstones than in deltaic sandstones. These results should be important for modelling of reservoir-quality distribution and exploration risk evaluation in the basin. [ABSTRACT FROM AUTHOR]- Published
- 2009
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20. ORGANIC - INORGANIC INTERACTIONS IN OILFIELD SANDSTONES: EXAMPLES FROM TURBIDITE RESERVOIRS IN THE CAMPOS BASIN, OFFSHORE EASTERN BRAZIL.
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Prochnow, E. A., Remus, M. V. D., Ketzer, J. M., Gouvea, Jr., J. C. R., de Souza, R. Schiffer, and De Ros, L. F.
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PETROLEUM geology ,TURBIDITES ,SANDSTONE ,RESERVOIRS ,DIAGENESIS - Abstract
Turbidite sandstone reservoir rocks in the Campos Basin, offshore eastern Brazil, show evidence of a number of interactions among organic and mineral phases during diagenesis. These include extensive dissolution of plagioclase, precipitation of kaolinite into intergranular and intragranular pores, dissolution of carbonate cements and grains, as well as selective deposition of organic films on kaolinite aggregates, dissolved plagioclase and carbonate grains. These processes are connected with the biodegradation of hydrocarbons within the reservoir, related to the influx of meteoric fluids possibly during sea-level lowstands, through major stratigraphic sequence boundaries and large-scale faults. Oil biodegradation generated organic solvents responsible for mineral alteration, as well as heavy oils rich in asphaltenes. The action of organic solvents in the reservoirs is indicated by the extensive dissolution of feldspars, quartz, garnets and kaolinite, and the negative mass balance between dissolved feldspar and precipitated kaolinite, indicating aluminum mobilization. Asphaltene films and coatings may affect the wettability of the reservoir rocks and the evaluation of hydrocarbon saturation in the reservoirs by resistivity logs. These various inorganic and organic processes are apparently interrelated in the diagenesis of the Campos Basin turbidite reservoir sandstones. These interactions should be considered in future models of the basin and its petroleum system, as well as for the creation of geochemical models capable of predicting the quality of the reservoirs and the occurrence of degraded heavy oils. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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21. Kaolinitic meniscus bridges as an indicator of early diagenesis in Nubian sandstones, Sinai, Egypt– discussion.
- Author
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Ketzer, J. Marcelo, De Ros, L. Fernando, and Dani, Norberto
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- *
SANDSTONE , *NUBIANS , *POROSITY , *TONSTEINS , *DIAGENESIS - Abstract
Discusses the use of Kaolinitic meniscus bridges as an indicator of early diagenesis in Nubian sandstones in Sinai, Egypt. Optical photomicrograph; Timing of kaolinization; Implication for porosity evolution; Color of the crystalline menisci aggregates; Coarsely crystalline accordion formation.
- Published
- 2005
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22. Sequence stratigraphic distribution of diagenetic alterations in coal-bearing, paralic sandstones: evidence from the Rio Bonito Formation (early Permian), southern Brazil.
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Ketzer, J. Marcelo, Holz, Michael, Morad, S., and Al-Aasm, I.S.
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SEQUENCE stratigraphy , *SANDSTONE , *PERMIAN stratigraphic geology - Abstract
Abstract Linking siliciclastic diagenesis to sequence stratigraphy allows a better understanding of the parameters controlling the spatial and temporal distribution of diagenetic alterations, and hence of reservoir quality. A study of the coal-bearing, alluvial, deltaic, estuarine and shallow-marine sandstones of the Rio Bonito Formation, early Permian, Paraná Basin (southern Brazil), reveals that the distribution of diagenetic alterations and of related reservoir quality evolution can be constrained within a sequence stratigraphic framework. Calcite, dolomite, siderite, kaolinite and pyrite cementation is consistently linked to sequence and parasequence boundaries, transgressive and maximum flooding surfaces and is systematically distributed within lowstand, transgressive and highstand systems tracts. Diagenesis of coal layers at parasequence boundaries has promoted the formation of stratabound calcite (detectable in resistivity wire line logs), concretionary pyrite and kaolinite and of silicate grain dissolution in sandstones located above and below these boundaries, particularly in the transgressive systems tract. Meteoric water diagenesis caused grain dissolution and the formation of kaolinite in sandstones below sequence boundaries and in lowstand systems tract sandstones. Carbonate bioclasts and low sedimentation rates in lag deposits at parasequence boundaries, transgressive and maximum flooding surfaces favoured the formation of grain-rimming siderite. The results of this study are relevant to the exploration of coal-bed methane and other coal-bearing reservoirs, where it is crucial to unravel and predict the distribution and quality of reservoirs and compartments. [ABSTRACT FROM AUTHOR]
- Published
- 2003
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23. Spatial and temporal distribution of diagenetic alterations in siliciclastic rocks: implications for mass transfer in sedimentary basins.
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Morad, S., Ketzer, J. M., and de Ros, L. F.
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ROCK-forming minerals , *DIAGENESIS , *SEDIMENT compaction , *SEDIMENTARY structures , *SILICATES , *GEOTHERMAL brines - Abstract
The spatial and temporal distribution of diagenetic alterations in siliciclastic sequences is controlled by a complex array of interrelated parameters that prevail during eodiagenesis, mesodiagenesis and telodiagenesis. The spatial distribution of near-surface eogenetic alteration is controlled by depositional facies, climate, detrital composition and relative changes in sea-level. The most important eogenetic alterations in continental sediments include silicate dissolution and the formation of kaolinite, smectite, calcrete and dolocrete. In marine and transitional sediments, eogenetic alterations include tile precipitation of carbonate, opal, microquartz, Fe-silicates (glaucony, berthierine mad nontronite), sulphides and zeolite. The eogenetic evolution of marine and transitional sediments can probably be developed within a predictable sequence stratigraphic context. Mesodiagenesis is strongly influenced by the induced eogenetic alterations, as well as by temperature, pressure and tile composition of basinal brines. The residence time of sedimentary sequences under certain burial conditions is of key importance in determining the timing, extent and patterns of diagenetic modifications induced. The most important mesogenetic alterations include feldspar albitization, illitization and c.hloritization of smectite and kaolinite, dickitization of kaolinite, chemical compaction as well as quartz and carbonate cementation. Various aspects of deep-burial mesodiagenesis are still poorly understood, such as: (i) whether reactions are accomplished by active fluid flow or by diffusion; (ii) the pattern mad extent of mass transfer between mudrocks and sandstones; (iii) the role of hydrocarbon emplacement on sandstone diagenesis; mad (iv) the importance and origin of fluids involved in the formation of secondary inter- and intragranular porosity during mesodiagenesis. Uplift and incursion of meteoric waters induce telogenetic alterations that include kaolinitization and carbonate-cement dissolution down to depths of tens to a few hundred metres below the surface. [ABSTRACT FROM AUTHOR]
- Published
- 2000
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24. The impact of diagenesis on the heterogeneity of sandstone reservoirs: A review of the role of depositional facies and sequence stratigraphy.
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Morad, S., Al-Ramadan, Khalid, Ketzer, J. M., and De Ros, L. F.
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DIAGENESIS ,HETEROGENEITY ,GAS reservoirs ,SANDSTONE ,FACIES ,SEQUENCE stratigraphy ,POROSITY ,PERMEABILITY - Abstract
Diagenesis exerts a strong control on the quality and heterogeneity of most clastic reservoirs. Variations in the distribution of diagenetic alterations usually accentuate the variations in depositional porosity and permeability. Linking the types and distribution of diagenetic processes to the depositional facies and sequence-stratigraphic framework of clastic successions provides a powerful tool to predict the distribution of diagenetic alterations controlling quality and heterogeneity. The heterogeneity patterns of sandstone reservoirs, which determine the volumes, flow rates, and recovery of hydrocarbons, are controlled by geometry and internal structures of sand bodies, grain size, sorting, degree of bioturbation, provenance, and by the types, volumes, and distribution of diagenetic alterations. Variations in the pathways of diagenetic evolution are linked to (1) depositional facies, hence pore-water chemistry, depositional porosity and permeability, types and amounts of intrabasinal grains, and extent ofbioturbation; (2) detrital sand composition; (3) rate of deposition (controlling residence time of sediments at specific near-surface, geochemical conditions); and (4) burial thermal history of the basin. The amounts and types of intrabasinal grains are also controlled by changes in the relative sea level and, therefore, can be predicted in the context of sequence stratigraphy, particularly in paralic and shallow marine environments. Changes in the relative sea level exert significant control on the types and extent of near-surface shallow burial diagenetic alterations, which in turn influence the pathways of burial diagenetic and reservoir quality evolution of clastic reservoirs. Carbonate cementation is more extensive in transgressive systems tract (TST) sandstones, particularly below parasequence boundaries, transgressive surface, and maximum flooding surface because of the abundance of carbonate bioclasts and organic matter, bioturbation, and prolonged residence time of the sediments at and immediately below the sea floor caused by low sedimentation rates, which also enhance the formation of glaucony. Eogenetic grain-coating berthierine, odinite, and smectite, formed mostly in TST and early highstand systems tract deltaic and estuarine sandstones, are transformed into ferrous chlorite during mesodiagenesis, helping preserve reservoir quality through the inhibition of quartz cementation. The infiltration of grain-coating smectitic clays is more extensive in braided than in meandering fluvial sandstones, forming flow barriers in braided amalgamated reservoirs, and may either help preserve porosity during burial because of quartz overgrowth inhibition or reduce it by enhancing intergranular pressure dissolution. Diagenetic modifications along sequence boundaries are characterized by considerable dissolution and kaolinization of feldspars, micas, and mud intraclasts under wet and warm climates, whereas a semiarid climate may lead to the formation of calcrete dolocrete cemented layers. Turbidite sandstones are typically cemented by carbonate along the contacts with interbedded mudrocks or carbonate mudstones and marls, as well as along layers of concentration of carbonate bioclasts and intraclasts. Commonly, hybrid carbonate turbidite arenites are pervasively cemented. Proximal, massive turbidites normally show only scattered spherical or ovoid carbonate concretions. Improved geologic models based on the connections among diagenesis, depositional facies, and sequence-stratigraphic surfaces and intervals may not only contribute to optimized production through the design of appropriate simulation models for improved or enhanced oil recovery strategies, as well as for CO
2 geologic sequestration, but also support more effective hydrocarbon exploration through reservoir quality prediction. [ABSTRACT FROM AUTHOR]- Published
- 2010
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25. CO2 sequestration potential of Charqueadas coal field in Brazil
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Ketzer, J
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- 2013
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26. CO2 sequestration potential of Charqueadas coal field in Brazil
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Santarosa, Cristian S., Crandall, Dustin, Haljasmaa, Igor V., Hur, Tae-Bong, Fazio, James J., Warzinski, Robert P., Heemann, Roberto, Ketzer, J. Marcelo M., and Romanov, Vyacheslav N.
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- *
CARBON sequestration , *COALFIELDS , *METHANE synthesis , *COALBED methane , *PERMEABILITY - Abstract
Abstract: Although coal is not the primary source of energy in Brazil there is growing interest to evaluate the potential of coal from the south of the country for various activities. The I2B coal seam in the Charqueadas coal field has been considered a target for enhanced coal bed methane production and CO2 sequestration. A detailed experimental study of the samples from this seam was conducted at the NETL with assistance from the Pontifícia Universidade Católica Do Rio Grande Do Sul. Such properties as sorption capacity, internal structure of the samples, porosity and permeability were of primary interest in this characterization study. The samples used were low rank coals (high volatile bituminous and sub-bituminous) obtained from the I2B seam. It was observed that the temperature effect on adsorption capacity correlates negatively with as-received water and mineral content. Langmuir CO2 adsorption capacity of the coal samples ranged 0.61–2.09mmol/g. The upper I2B seam appears to be overall more heterogeneous and less permeable than the lower I2B seam. The lower seam coal appears to have a large amount of micro-fractures that do not close even at 11MPa of confining pressure. [Copyright &y& Elsevier]
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- 2013
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27. Diagenesis at exposure surface in transgressive systems tract in third order sequence (Lower Carboniferous, Belgium)
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Smeesters, Anne, Muchez, Philippe, Swennen, Rudi, Keppens, Edward, Morad, S., Ketzer, J. M., Ros, L. F. De, Earth System Sciences, Geology, Chemistry, Isotope Geology and Evolution of Paleo-Environmnents, and Analytical, Environmental & Geo-Chemistry
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surgical procedures, operative ,Diagenesis ,Stable isotopes - Abstract
This chapter determines the influence of exposure surfaces with possible influx of meteoric waters on the exposed limestone and its effect on porosity and cementation history. The small scale sequences that belong to the lower part of the transgressive systems tract (TST) show a diagenetic evolution starting with marine cementation with fibrous and pendant radiaxial cements that is best developed near the top of the sequences due to evaporation of marine waters. The third order, type 1 sequence boundary caused the pervasive cementation of almost all initial porosity in the limestone below the boundary due to a prolonged exposure. The chapter demonstrates that short-term exposure seems to be more effective than longer exposure in creating porosity in limestone sequences.
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- 2013
28. Congenital Colorectal Conditions: Caregiver Perspectives of Their Experience in the Neonatal Intensive Care Unit.
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Melkonian VJ, Bischoff A, de la Torre L, Ketzer J, Matkins K, and Judd-Glossy L
- Abstract
Background: This study aimed to examine the experiences of children with colorectal conditions who spent time in the Neonatal Intensive Care Unit (NICU) and their caregivers., Methods: In March 2024, a 36-question survey was sent to the Colorectal Support Network Facebook community, to gather information from caregivers of children who have a congenital colorectal diagnosis and spent time in the NICU., Results: Fifty-two families completed the survey. Most patients were diagnosed after birth (89.47%). Approximately half of respondents stayed in the NICU for one to two weeks (50.88%), lived less than 60 minutes away from the hospital (54.91%), and felt somewhat uncomfortable (28.07%) or very uncomfortable (21.05%) caring for their child's medical needs after discharge. Also 49.12% of caregivers were informed of their child's future bowel control prognosis. When asked for suggestions to improve care in the NICU, common themes included the importance of having colorectal congenital anomalies addressed by colorectal surgeons, and the need for families to be informed about support groups., Conclusions: Counseling families in the NICU with congenital colorectal conditions can be improved by providing additional information and support for families prior to discharge, informing them about their child's prognosis for bowel control, and connecting them with other families., Competing Interests: The authors declare that they have no conflict of interest., (Thieme. All rights reserved.)
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- 2024
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29. Economic Impact of Daily Bowel Management Regimens.
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Melkonian V, de la Torre L, Ketzer J, Rodriguez V, Schneider L, Martin H, Merritt A, Krause A, Wickham M, Pena A, and Bischoff A
- Abstract
Background: Chronic constipation and fecal incontinence are devastating problems for patients with anorectal malformations, Hirschsprung's disease, idiopathic constipation, and spina bifida/spinal cord injuries. Finding the proper regimen allows these patients to be out of diapers and free of stool accidents. A typical bowel management regimen consists of daily laxatives or enemas; because these products are sold over the counter, insurance companies do not cover them. This study reviews the cost of bowel regimens and analyzes their economic impact on the families we treat., Methods: A retrospective review of patients undergoing bowel management between January 2016 and September 2023 was done. The mean annual income of families was calculated using their zip codes., Results: Upon review, 430 patients met inclusion criteria; 167 were on laxatives, and 263 were using enemas. There was significant variation in the cost of medications based on the distributors they were bought from and the dose of the medication in their regimen. The cost of laxatives ranged from $15.70 to $2938.10 annually. The cost of enemas containing glycerin ranged from $29.20 to $4380.00 annually. In comparison, diapers/incontinence briefs ranged from $131.40 to $4343.50 annually. The median annual income of patients across 41 states ranged from $32,192 to $225,119., Conclusions: Our findings emphasize the importance of proper counseling families regarding medication costs in the market, intending to promote long-term treatment adherence. They also serve as a data source to advocate for improved insurance coverage of the medications required to manage these chronic conditions successfully., Level of Evidence: IV., Competing Interests: Conflict of interest The authors have no conflict of interests or competing interests to declare., (Copyright © 2024 Elsevier Inc. All rights reserved.)
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- 2024
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30. The observational EURACAN prospective clinical registry dedicated to epithelioid hemangioendothelioma: The protocol of an international and collaborative effort on an ultra-rare entity.
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Frezza AM, Leonard H, Aggerholm-Pedersen N, Badalamenti G, Baili P, Baldi GG, Bauer S, Bazzurri S, Benzonelli I, Bertuzzi A, Blay JY, Bianchi G, Bonfarnuzzo S, Bouvier C, Boye K, Martin Broto J, Brunello A, Campanacci D, Casali PG, Cicala C, Crotti E, D'Ambrosio L, Dei Tos AP, Dieckmann N, Dufresne A, Elston S, Ferraresi V, Gabellini S, Giani C, Giannusa V, Gil Sanjines M, Grassani T, Gronchi A, Lasalvia P, Lindskog S, Hindi N, Ingrosso M, Ivanescu A, Jones R, Lugowska I, Ketzer J, Mariuk-Jarema A, Mazzocca A, Monteleone L, Morosi C, Napolitano A, Nardozza F, Neri E, Nilsson M, Papakonstantinou A, Pasquali S, Sbaraglia M, Scolari F, Szkandera J, Valverde C, Vincenzi B, Vizzaccaro S, Zuccheri F, Stacchiotti S, and Trama A
- Subjects
- Humans, Prospective Studies, Adult, Prognosis, Male, Female, Registries, Hemangioendothelioma, Epithelioid pathology, Hemangioendothelioma, Epithelioid mortality, Hemangioendothelioma, Epithelioid therapy, Hemangioendothelioma, Epithelioid diagnosis
- Abstract
Introduction: Epithelioid hemangioendothelioma (EHE) is an ultra-rare sarcoma, marked by distinctive molecular and pathological features and with a variable clinical behavior. Its natural history is still partially understood, reliable prognostic and predictive factors are lacking and many questions are still open on the optimal management. In the context of EURACAN, a prospective registry specifically dedicated to EHE was developed and launched with the aim of providing, through high-quality prospective data collection, a better understanding of this disease., Study Design: Registry-based cohort study including only new cases of patients with a pathological and molecularly confirmed diagnosis of EHE., Objectives: To improve the understanding of EHE natural history, validate and identify new prognostic and predictive factors, clarify the activity and efficacy of currently available treatment options, describe treatment pattern., Methods: Settings and participantsIt is an hospital-based registry established in centers with expertise in EHE including adult patients with a new pathological and molecularly confirmed diagnosis of EHE starting from the 1st December 2023. The characteristics of each patient in the facility who meets the above-mentioned inclusion criteria will be collected prospectively and longitudinally with follow-up at cancer progression and / or cancer relapse or patient death. It is a secondary use of data which will be collected from the clinical records. The data collected for the registry will not entail further examinations or admissions to the facility and/or additional appointments to those normally provided for routine patient follow-up. VariablesFull details on patients and disease features, treatment and outcome will be collected, according to common clinical practice guidelines developed and shared with all the contributing centers. In addition, data on potential confounders (e.g. comorbidity; functional status etc.) will also be collected. Statistical methodsThe data analyses will include descriptive statistics and analytical analyses. Multivariable Cox's proportional hazards model and Hazard ratios (HR) for all-cause or cause-specific mortality will be used to determine independent predictors of overall survival, recurrence and progression., Results: The registry has been joined by 21 sarcoma reference centers across EU and UK, covering 10 countries. Patients' recruitment started in December 2023. The estimated completion date is December 2033 upon agreement on the achievement of all the registry objectives. The already established collaboration and participation of EHE patient's associations involved in the project will help in promoting the registry and fostering accrual., Competing Interests: Anna Maria Frezza declares institutional research funding from Advenchen Laboratories, Amgen Dompé, AROG Pharmaceuticals, Ayala Pharmaceuticals, Bayer, Blueprint Medicines, Boehriger Ingelheim, Daiichi Sankyo, Deciphera, Eisai, Eli Lilly, Epizyme Inc, Foghorn Therapeutics Inc., Glaxo, Hutchison MediPharma Limited, Inhibrx, Inc., Karyopharm Pharmaceuticals, Novartis, Pfizer, PharmaMar, PTC Therapeutics, Rain Oncology, SpringWorks Therapeutics. Alexia Bertuzzi declares support for attending meeting and/or travels from Pharmamar and Istituto Gentili; support for scientific activities from Istituto Gentili. Antonella Brunello declares consulting fees or serving on advisory boards for Eli Lilly, Roche, GSK, Eisai, Pharmamar, Boehringer Ingelheim, Deciphera; payment or honoraria for educational events by GSK and Pharmamar; travel grants by Pharmamar, Istituto Gentili. Giacomo G. Baldi declares consulting fees from Eli Lilly, Pharmamar, AboutEvents; honoraria from Pharmamar, Eli Lilly, Glaxo Smith Kline, Merck Sharp & Dome, Eisai, IstitutoGentili; support for attending meetings and/or travels from Novartis, Pharmamar, Eli Lilly; participation on the advisory board from Pharmamar, Eli Lilly, Glaxo Smith Kline, Merck Sharp & Dome, Eisai. Paolo G. Casali declares institutional research funding from Advenchen Laboratories, Amgen Dompé, AROG Pharmaceuticals, Ayala Pharmaceuticals, Bayer, Blueprint Medicines, Boehriger Ingelheim, Daiichi Sankyo, Deciphera, Eisai, Eli Lilly, Epizyme Inc, Foghorn Therapeutics Inc., Glaxo, Hutchison MediPharma Limited, Inhibrx, Inc., Karyopharm Pharmaceuticals, Novartis, Pfizer, PharmaMar, PTC Therapeutics, Rain Oncology, SpringWorks Therapeutics. Virginia Ferraresi declares consultancy fees or honoraria from PharmaMar, Boehringer Ingelheim, Gentili e Serb Pharmaceuticals. Matilde Ingrosso reports institutional research funding from Advenchen Laboratories, Amgen Dompé, AROG Pharmaceuticals, Ayala Pharmaceuticals, Bayer, Blueprint Medicines, Boehriger Ingelheim, Daiichi Sankyo, Deciphera, Eisai, Eli Lilly, Epizyme Inc, Foghorn Therapeutics Inc., Glaxo, Hutchison MediPharma Limited, Inhibrx, Inc., Karyopharm Pharmaceuticals, Novartis, Pfizer, PharmaMar, PTC Therapeutics, Rain Oncology, SpringWorks Therapeutics. Laura Monteleone reports institutional research funding from Advenchen Laboratories, Amgen Dompé, AROG Pharmaceuticals, Ayala Pharmaceuticals, Bayer, Blueprint Medicines, Boehriger Ingelheim, Daiichi Sankyo, Deciphera, Eisai, Eli Lilly, Epizyme Inc, Foghorn Therapeutics Inc., Glaxo, Hutchison MediPharma Limited, Inhibrx, Inc., Karyopharm Pharmaceuticals, Novartis, Pfizer, PharmaMar, PTC Therapeutics, Rain Oncology, SpringWorks Therapeutics. Johanna Szkandera reports participation in advisory boards or invited speaker fees for PharmaMar, Bayer, Roche, Lilly, Amgen; travel expenses coverage from PharmaMar, Roche, Lilly, Amgen, Bristol Myers Squibb; research funding from PharmaMar, Roche, Eisai. Bruno Vincenzi reports consulting fees from Eisai, Lilly, Bayer, Deciphera, PharmaMar, Blueprint, Pfizer, GSK, Accord, Abbott and research support from PharmaMar, Novartis, Lilly Silvia Stacchiotti declares advisory board roles with Bayer, Boehringer, Daiichi, Ikena, Nec Oncology, Pharma Essentia, Regeneron, Servier; invited speaker roles for Bayer, Boehringer, Gentili, Pharmamar; institutional research funding from Advenchen Laboratories, Amgen Dompé, AROG Pharmaceuticals, Ayala Pharmaceuticals, Bayer, Blueprint Medicines, Boehriger Ingelheim, Daiichi Sankyo, Deciphera, Eisai, Eli Lilly, Epizyme Inc, Foghorn Therapeutics Inc., Glaxo, Hutchison MediPharma Limited, Inhibrx, Inc., Karyopharm Pharmaceuticals, Novartis, Pfizer, PharmaMar, PTC Therapeutics, Rain Oncology, SpringWorks Therapeutics. Carlo Cicala, Lorenzo D’Ambrosio, Angelo Paolo Dei Tos, Alessandro Gronchi, Nadia Hindi, Robin Jones, Iwona Lugowska, Julia Ketzer, Anna Mariuk-Jarema, Andrea Napolitano, Andri Papakonstantinou, Sandro Pasquali, Marta Sbaraglia, Federico Scolari, Elisa Crotti, Irene Benzonelli, Jean-Yves Blay, Christophe Bouvier, Javier Martin Broto, Hugh Leonard, Ninna Aggerholm-Pedersen, Andri Papakonstantinou, Giuseppe Bianchi, Federica Zuccheri, Paolo Baili, Simone Bonfarnuzzo, Domenico Campanacci, Armelle Dufresne, Sebastian Bauer, Serena Bazzurri, Stefano Gabellini, Claudia Giani, Vincenzo Giannusa, Melissa Gil-Sanjines, Teresa Grassani, Paolo Lasalvia, Stefan Lindskog, Salvatore Vizzaccaro, Nils Dieckmann, Alessandro Mazzocca, Andrei Ivanescu, Giuseppe Badalamenti, Carlo Morosi, Stephanie Elston, Kyetil Boye, Francesca Nardozza, Elisabetta Neri, Maria Nilsson and Annalisa Trama declares no conflict of interest., (Copyright: © 2024 Frezza et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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31. Predictors of medical adherence following a bowel management program for youth and young adults with Spina Bifida.
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Simpson T, Scott S, Ketzer J, Matkins K, Schneider L, De La Torre L, Bischoff A, Melkonian V, and Judd-Glossy L
- Subjects
- Humans, Male, Female, Adolescent, Child, Young Adult, Patient Compliance statistics & numerical data, Retrospective Studies, Child, Preschool, Spinal Dysraphism
- Abstract
Purpose: To evaluate individual and community sociodemographic factors that predict bowel regimen adherence in youth and young adults with Spina Bifida (SB) following participation in a bowel management program (BMP)., Methods: Participants were drawn from clinical cases seen through an International Center for Colorectal and Urogenital Care. Area deprivation index (ADI) scores were extracted from participant addresses and bowel regimen adherence data were collected from the electronic medical record (EMR)., Results: Participants' mean age was 8.06 years old, 51.7% were male, 72.4% white, 37.9% Hispanic, 56.9% government insurance, 89.7% myelomeningocele, 15.5% non-adherent. Average neighborhood disadvantage was 5.19 (SD:2.83, range:1-10). After controlling for variables correlated with adherence (p < .20), every one decile higher neighborhood disadvantage score was associated with a 48% decrease in the odds of being adherent (OR = 0.52, p = .005, 95% CI: - 101.90, - 0.21)., Conclusion: Our results suggest that neighborhood disadvantage is a strong predictor of medical adherence following a BMP, more so than other sociodemographic and health-related variables. These results may assist with identifying which individuals may be at higher risk for poor health outcomes due to neighborhood socioeconomic disadvantage and help health care systems intervene proactively., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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32. Urological outcomes in adult females born with anorectal malformation or Hirschsprung disease.
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Wehrli LA, Harris KT, Wood DT, Wilcox DT, Cooper EH, Rieck JM, McGuire E, Ketzer J, De La Torre L, Peña A, and Bischoff A
- Subjects
- Humans, Female, Cross-Sectional Studies, Adult, Young Adult, Adolescent, Middle Aged, Aged, Surveys and Questionnaires, Aged, 80 and over, Lower Urinary Tract Symptoms, Hirschsprung Disease surgery, Anorectal Malformations surgery, Anorectal Malformations complications
- Abstract
Introduction: Women born with anorectal malformation (ARM) or Hirschsprung disease (HD) may have impaired urologic function resulting in sequelae in adulthood. This study assessed and compared self-reported urinary outcomes in adult females born with ARM or HD to a reference population., Methods: This was an IRB approved, cross-sectional study of female-born patients with ARM or HD, who completed surveys between November 2021 and August 2022. Female patients between the ages of 18 and 80 years were included. Lower Urinary Tract Symptom Questionnaires were administered through REDCap and the responses were compared to a reference population using Chi-squared or Fisher's exact tests., Results: Sixty-six born female patients answered the questionnaires, two of them identified as non-binary. The response rate was 76%. Median age was 31.6 years. The majority were born with cloaca (56.3%), followed by other type of ARMs (28.1%), complex malformation (9.4%), and HD (6.3%). A history of bladder reconstruction was present for 26.6%. Catheterization through a channel or native urethra was present in 18.8%. Two had ureterostomies and were excluded from the analysis. Seven had chronic kidney disease or end-stage renal disease, three with a history of kidney transplantation. Patients with cloaca had significantly higher rates of urinary incontinence, urinary tract infection, and social problems due to impaired urological functioning, when compared to an age-matched reference population (Table 3)., Conclusion: This study emphasizes the need for a multi-disciplinary team that includes urology and nephrology following patients with ARM long term, especially within the subgroup of cloaca., Level of Evidence: III., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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33. Transanal proximal rectosigmoidectomy: a single-center experience in surgically treated severe medically refractory idiopathic constipation.
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Melkonian V, Wehrli L, Bischoff A, Cooper EH, Ketzer J, Judd-Glossy L, and de la Torre L
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- Humans, Male, Female, Child, Adolescent, Child, Preschool, Young Adult, Treatment Outcome, Retrospective Studies, Quality of Life, Constipation surgery, Constipation etiology, Rectum surgery, Colon, Sigmoid surgery
- Abstract
Purpose: To present the functional results after a transanal proximal rectosigmoidectomy in patients with severe idiopathic constipation in which medical treatment has failed., Methods: Patients with severe idiopathic constipation who underwent transanal proximal rectosigmoidectomy (TPRS) at Children's Hospital Colorado between June 2019 and March 2024 were included in the study. We compared multiple pre- and post-operative outcome measures and the patient's bowel regimen before and after resection., Results: Fourteen patients underwent TPRS, 10 of whom were male. The average age at the time of surgery was 10.1 years (range 5-19). Seven patients have moderate to severe autism. Constipation-related clinic visits, family calls, procedural intervention, emergency room visits, and hospitalizations notably decreased frequency after TPRS. Laxative dosages and enema volume requirements were also reduced after surgery. Before surgery, all the patients suffered from daily fecal accidents, while post-operatively, all were completely free of stool accidents., Conclusion: In our experience, for patients who suffer from severe medically refractory idiopathic constipation, TPRS has provided improvement in their symptoms and decreased the complications inherent to this chronic disease. Parents and patients attest to a profound positive transformation in their quality of life after surgery., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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34. "Take It One Dilation at a Time": Caregiver Perspectives of Postoperative Anal Dilations in Pediatric Patients with Colorectal Conditions.
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Wehrli LA, Ariefdjohan M, Ketzer J, Matkins K, De la Torre L, Bischoff A, and Judd-Glossy L
- Abstract
Background: Postoperative anal dilations (PAD) are the standard of care for patients after a posterior sagittal anorectoplasty (PSARP) for anorectal malformation (ARM) or a transanal pull-through (TP) procedure for Hirschsprung disease (HD). This study assessed the psychosocial impact of PAD among caregivers of children with ARM or HD, which may inform postoperative care strategies., Methods: Caregivers of patients with ARM and HD who underwent PSARP or TP within five years participated in the online survey. Questions included demographics, patient and caregiver experiences with PAD, and baseline psychosocial functioning. Quantitative results were reported descriptively, while qualitative responses were summarized as major themes., Results: The survey indicated a response rate of 26% caregivers, with most being female (91%) and biological mothers (85%). Patients were mostly male (65%), born with ARM (74%), and were five months old on average when PAD began. Caregivers reported that during PAD, children experienced distress (56%), pain (44%), and fear (41%), while a third noted no negative reactions. Over time, their child's ability to cope with PAD got easier (38%) or stayed the same (41%). Caregivers reported worry/anxiety (88%), guilt (71%), stress (62%), and frustration (35%), noting that additional coping strategies to manage the emotional and logistical challenges of daily PAD would be helpful., Conclusion: Although PAD is necessary, it can be highly stressful for the patients and their caregivers. Key findings emphasized the need for additional coping strategies and highlighted the importance of integrating psychosocial support into the postoperative care regimen.
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- 2024
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35. Molecularly Stratified Treatment Options in Primary Refractory DLBCL/HGBL with MYC and BCL2 or BCL6 Rearrangements (HGBL, NOS with MYC/BCL6).
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Witte HM, Riedl J, Künstner A, Fähnrich A, Ketzer J, Fliedner SMJ, Reimer N, Bernard V, von Bubnoff N, Merz H, Busch H, Feller A, and Gebauer N
- Subjects
- Humans, Proto-Oncogene Proteins c-bcl-6 genetics, Proto-Oncogene Proteins c-myc genetics, B-Lymphocytes, Gene Rearrangement, Proto-Oncogene Proteins c-bcl-2 genetics, Lymphoma, Large B-Cell, Diffuse drug therapy, Lymphoma, Large B-Cell, Diffuse genetics
- Abstract
Background: There is growing evidence supporting multidisciplinary molecular tumor boards (MTB) in solid tumors whereas hematologic malignancies remain underrepresented in this regard., Objective: The present study aimed to assess the clinical relevance of MTBs in primary refractory diffuse large B-cell lymphomas/high-grade B-cell lymphomas with MYC and BCL2 rearrangements (prDLBCL/HGBL-MYC/BCL2) (n = 13) and HGBL, not otherwise specified (NOS), with MYC and BCL6 rearrangements (prHGBL, NOS-MYC/BCL6) (n = 6) based on our previously published whole-exome sequencing (WES) cohort., Patients and Methods: For genomic analysis, the institutional MTB WES pipeline (University Cancer Center Schleswig-Holstein: UCCSH), certified for routine clinical diagnostics, was employed and supplemented by a comprehensive immunohistochemical work-up. Consecutive database research and annotation according to established evidence levels for molecularly stratified therapies was performed (NCT-DKTK/ESCAT)., Results: Molecularly tailored treatment options with NCT-DKTK evidence level of at least m2A were identified in each case. We classified mutations in accordance with biomarker/treatment baskets and detected a heterogeneous spectrum of targetable alterations affecting immune evasion (IE; n = 30), B-cell targets (BCT; n = 26), DNA damage repair (DDR; n = 20), tyrosine kinases (TK; n = 13), cell cycle (CC; n = 7), PI3K-MTOR-AKT pathway (PAM; n = 2), RAF-MEK-ERK cascade (RME; n = 1), and others (OTH; n = 11)., Conclusion: Our virtual MTB approach identified potential molecularly targeted treatment options alongside targetable genomic signatures for both prDLBCL/HGBL-MYC/BCL2 and prHGBL, NOS-MYC/BCL6. These results underline the potential of MTB consultations in difficult-to-treat lymphomas early in the treatment sequence., (© 2023. The Author(s).)
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- 2023
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36. Gastrointestinal quality of life and bowel function in adults born with anorectal malformation and hirschsprung disease.
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Wehrli LA, Reppucci ML, De La Torre L, Ketzer J, Rieck JM, Cooper EH, Judd-Glossy L, Peña A, and Bischoff A
- Subjects
- Male, Humans, Adult, Quality of Life psychology, Defecation, Surveys and Questionnaires, Anorectal Malformations psychology, Hirschsprung Disease diagnosis
- Abstract
Purpose: To assess the quality of life and disease-specific functioning of adults with anorectal malformations (ARM) or Hirschsprung disease (HD) compared to healthy reference scores., Methods: Patients with the diagnosis of ARM or HD from the Adult Colorectal Research Registry completed the Short Form 36 Health Survey (SF-36), the Gastrointestinal Quality of Life Index (GIQoLI), and the Bowel Function Score (BFS) between October 2019 and August 2022. One-sample Wilcoxon test compared the results to reported healthy references with a significance level of < 0.05., Results: The response rate was 67%. All three surveys were completed by 133 adults with a slight preponderance of males (51%). Median age was 31 years, 117 were born with ARM and 16 with HD. All subgroups had significantly lower BFS than healthy references. ARM patients scored significantly lower than the healthy reference population when assessed for GIQoL. All showed significant impairment with the mental component summary (MCS) of SF-36. Patients with a successful bowel management had significantly higher scores on all three questionnaires than those with fecal accidents., Conclusion: Our results emphasize the importance of a successful bowel management and its impact on the quality of life and bowel function. Long-term follow-up is recommended with attention to mental health., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2023
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37. Identifying predictive factors for bowel control in patients with spina bifida and spinal cord injuries.
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Domínguez-Muñoz A, De La Torre L, Santos-Jasso K, Schneider L, Merritt A, Wickham M, Ketzer J, Rodriguez V, Peña A, and Bischoff A
- Subjects
- Child, Humans, Feces, Fecal Incontinence etiology, Spinal Dysraphism complications, Spinal Dysraphism surgery, Spinal Cord Injuries complications, Spinal Cord Injuries surgery, Urinary Incontinence
- Abstract
Purpose: This study aimed to assess our bowel management program (BMP) and identify predictive factors for bowel control in patients with Spina Bifida (SB) and Spinal Cord Injuries (SCI). Additionally, in patients with SB, we examined the impact of fetal repair (FRG) on bowel control., Methods: We included all patients with SB and SCI seen in the Multidisciplinary Spinal Defects Clinic at Children's Hospital Colorado from 2020 to 2023., Results: 336 patients included. Fecal incontinence was present in 70% and bowel control in 30%. All patients with urinary control also had bowel control. Fecal incontinence prevalence was higher in patients with ventriculoperitoneal (VP) shunt (84%), urinary incontinence (82%), and wheelchair users (79%) compared to those who did not need a VP shunt (56%), had urinary continence (0%) and non-wheelchair users (52%), respectively (p = < 0.001 in all three scenarios). After completing BMP, 90% remained clean for stool. There was no statistical significance when comparing bowel control in FRG with non-fetal repair group., Conclusions: Urinary continence predicts bowel control in patients with SB and SCI. Risk factors for fecal incontinence were the need for a VP shunt, urinary incontinence, and wheelchair usage. We did not find any positive impact of fetal repair on bowel and urinary control., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2023
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38. Radiologically supervised bowel management program outcome in patients with chronic idiopathic constipation.
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Domínguez-Muñoz A, Bischoff A, Wehrli LA, Judd-Glossy L, Schneider L, Merritt A, Wickham M, Ketzer J, Rodriguez V, Peña A, and De La Torre L
- Subjects
- Child, Humans, Retrospective Studies, Sennosides therapeutic use, Polyethylene Glycols therapeutic use, Enema, Colon, Sigmoid, Treatment Outcome, Constipation diagnostic imaging, Constipation therapy, Megacolon
- Abstract
Purpose: This study aimed to analyze our radiologically supervised bowel management program (RS-BMP) outcomes in patients with chronic idiopathic constipation (CIC)., Methods: A retrospective study was conducted. We included all patients with CIC who participated in our RS-BMP at Children´s Hospital Colorado from July 2016 to October 2022., Results: Eighty patients were included. The average time with constipation was 5.6 years. Before our RS-BMP, 95% had received non-radiologically supervised treatments, and 71% had attempted two or more treatments. Overall, 90% had tried Polyethylene Glycol and 43% Senna. Nine patients had a history of Botox injections. Five underwent anterograde continence procedure, and one a sigmoidectomy. Behavioral disorders (BD) were found in 23%. At the end of the RS-BMP, 96% of patients had successful outcomes, 73% were on Senna, and 27% were on enemas. Megarectum was detected in 93% of patients with successful outcomes and 100% with unsuccessful outcomes (p = 0.210). Of the patients with BD, 89% had successful outcomes, and 11% had unsuccessful., Conclusion: Our RS-BMP has been proven to be effective in treating CIC. The radiologically supervised use of Senna and enemas was the appropriate treatment in 96% of the patients. BD and megarectum were associated with unsuccessful outcomes., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2023
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39. Fertility concerns and outcomes in females with anorectal malformations.
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Wehrli LA, Reppucci ML, Woodfield K, Ketzer J, Rieck JM, Cooper EH, De La Torre L, Pena A, Bischoff A, and Alaniz VI
- Subjects
- Pregnancy, Adult, Infant, Newborn, Humans, Female, Adolescent, Cross-Sectional Studies, Fertility, Pregnancy Outcome, Anorectal Malformations complications, Anorectal Malformations surgery, Urogenital Abnormalities
- Abstract
Purpose: To assess fertility concerns and to describe pregnancy outcomes in patients with anorectal malformations (ARM)., Methods: This is an IRB approved, cross-sectional study of patients in the Adult Colorectal Research Registry who completed reproductive health surveys between November 2021 and August 2022. Patients assigned female at birth with age 18 or older and ARM were included., Results: Sixty-four patients with ARM, age 18 or older, were included. Fertility concerns were reported in 26 (40.6%) patients, 11 of which had seen a fertility specialist, including four who had not yet tried to conceive. Fertility concerns were highest amongst cloaca patients who had not yet tried to conceive (37.5%). 26 (40.6%) patients had tried to conceive, of which 16 (25%) reported fertility problems, most frequently uterine abnormalities and damaged or blocked fallopian tubes. 22 (34.4%) participants were able to conceive and 18 (28.1%) had at least one live birth. Patients with ARM who had concerns of fertility, had better FertiQoL when compared to published reference scores for patients experiencing fertility issues., Conclusion: Providers should be aware of fertility concerns in patients with ARM. Proactive counseling with referrals to a fertility specialist should be considered in patients who desire future fertility., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2023
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40. Evaluation of the Effect of Photodynamic Therapy on CAM-Grown Sarcomas.
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Kerkhoff M, Grunewald S, Schaefer C, Zöllner SK, Plaumann P, Busch M, Dünker N, Ketzer J, Kersting J, Bauer S, Hardes J, Streitbürger A, Dirksen U, Hartmann W, and Guder WK
- Abstract
Resection margin adequacy plays a critical role in the local control of sarcomas. Fluorescence-guided surgery has increased complete resection rates and local recurrence-free survival in several oncological disciplines. The purpose of this study was to determine whether sarcomas exhibit sufficient tumor fluorescence (photodynamic diagnosis (PDD)) after administration of 5-aminolevulinic acid (5-ALA) and whether photodynamic therapy (PDT) has an impact on tumor vitality in vivo. Sixteen primary cell cultures were derived from patient samples of 12 different sarcoma subtypes and transplanted onto the chorio-allantoic membrane (CAM) of chick embryos to generate 3-dimensional cell-derived xenografts (CDXs). After treatment with 5-ALA, the CDXs were incubated for another 4 h. Subsequently accumulated protoporphyrin IX (PPIX) was excited by blue light and the intensity of tumor fluorescence was analyzed. A subset of CDXs was exposed to red light and morphological changes of both CAMs and tumors were documented. Twenty-four hours after PDT, the tumors were excised and examined histologically. High rates of cell-derived engraftments on the CAM were achieved in all sarcoma subtypes and an intense PPIX fluorescence was observed. PDT of CDXs resulted in a disruption of tumor-feeding vessels and 52.4% of CDXs presented as regressive after PDT treatment, whereas control CDXs remained vital in all cases. Therefore, 5-ALA mediated PDD and PDT appear to be promising tools in defining sarcoma resection margins (PDD) and adjuvant treatment of the tumor bed (PDT).
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- 2023
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41. The success rate of antegrade enemas for the management of idiopathic constipation.
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Reppucci ML, Nolan MM, Cooper E, Wehrli LA, Schletker J, Ketzer J, Peña A, Bischoff A, and De la Torre L
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- Child, Humans, Retrospective Studies, Enema methods, Constipation therapy, Polyethylene Glycols, Treatment Outcome, Laxatives, Fecal Incontinence therapy
- Abstract
Purpose: Most patients with idiopathic constipation achieve daily voluntary bowel movements with stimulant laxatives after a "Structured Bowel Management Program" (BMP). A small percentage require rectal enemas. One week in a BMP to find the right enema recipe results in a success rate great than 95%. Once the enema is radiologically and clinically effective, antegrade continent enema procedures (ACE) can afford patients an alternative route of enema administration. This study summarized the outcomes of children with idiopathic constipation who receive antegrade enemas (AE) with or without a prior BMP., Methods: This was a single institution, retrospective cohort study of children with idiopathic constipation who underwent ACE procedures indicated by different providers from 2015-2020. We categorized the outcomes with AE after the ACE procedure as: "successful outcome" when the AE produced a daily bowel movement, no involuntary bowel movements, and no more fecal impactions, "unsuccessful outcome" was defined when the patient continued having involuntary bowel movements or fecal impaction requiring cleanouts despite a daily AE, and "unnecessary outcome" was defined when the patient was no longer doing AE, but had daily bowel movements, and no involuntary bowel movements or fecal impactions., Results: Thirty-eight children with idiopathic constipation had an ACE. The most frequent indication for ACE was a failure of medical treatment. The most common medical treatment was polyethylene glycol. Before ACE, 34 (89%) patients did not have a BMP; 18 patients were on rectal enemas and 16 on laxatives. All four with BMP (100%) had a successful rectal enema. After ACE, 12 (31%) patients had successful antegrade enemas, including the four with previous successful BMP with rectal enemas. Twenty patients (52%) had unsuccessful antegrade enemas, and in 6 (15%), the ACE was unnecessary (Fig. 1)., Conclusion: Using antegrade enemas without a previously successful formula for rectal enemas has resulted in a high rate of unsuccessful and unnecessary procedures. BMP for children with idiopathic constipation who needs rectal enemas offers a high possibility to find the proper rectal enema recipe and ensures higher rates of successful AE., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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42. Patient-reported urinary outcomes in adult males with congenital colorectal conditions.
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Reppucci ML, Wehrli LA, Wilcox D, Ketzer J, Pena A, de la Torre L, Bischoff A, and Wood D
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- Adult, Humans, Male, Prospective Studies, Patient Reported Outcome Measures, Anorectal Malformations complications, Hirschsprung Disease complications, Urinary Bladder Fistula complications, Colorectal Neoplasms complications
- Abstract
Purpose: Long-term urinary outcomes for patients born with Hirschsprung disease (HD) and anorectal malformations (ARM) may impact their health and wellbeing into adulthood. This study describes self-reported long-term urinary outcomes in males with HD and ARM., Methods: This was a prospective study of male patients in the Adult Colorectal Research Registry who completed surveys on urinary function between October 2019 and March 2022. Self-reported health and functional outcomes were summarized, and differences based on type of condition were compared., Results: Sixty-seven patients completed the questionnaire (response rate: 59.1%), of which 17.9% (12) had HD and 82.1% (55) had an ARM. Rates of urinary incontinence and stress urinary incontinence were 16.4% (11) and 4.5% (3), respectively. On sub-analysis of patients with ARM, patients with sacral ratio (SR) of 0.4-0.69 reported higher UTI rates compared to those with SR ≥ 0.7 (57.9 vs 25.8%, p = 0.023). Renal failure rates were highest among patients with recto-bladder neck fistulas (66.0%, p = 0.012)., Conclusion: Patients with HD and ARM report a variety of urological sequelae in adulthood. Outcomes appear to be more common in patients with ARM and may be impacted by both anatomy and sacral ratios. Transitional care to monitor and manage renal and urological function is imperative., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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43. Sexual function and fertility of adult males with anorectal malformations or Hirschsprung disease.
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Reppucci ML, Wehrli LA, Wilcox D, Ketzer J, Pena A, de la Torre L, Bischoff A, and Wood D
- Subjects
- Adult, Humans, Male, Erectile Dysfunction epidemiology, Prospective Studies, Surveys and Questionnaires, Fertility physiology, Anorectal Malformations complications, Anorectal Malformations physiopathology, Hirschsprung Disease complications, Hirschsprung Disease physiopathology
- Abstract
Purpose: The long-term impact of anorectal malformations (ARM) and Hirschsprung disease (HD) on sexual function is well recognized but understudied. This study evaluated self-reported sexual and fertility outcomes in adult males with ARM and HD., Methods: This was an IRB approved, prospective study of males in the Adult Colorectal Research Registry who completed surveys between October 2019 and March 2022. Electronic surveys were administered after consenting to being contacted for research. Patients completed the International Index of Erectile Function (IIEF) questionnaire and provided information on fertility outcomes., Results: Sixty-five patients completed outcome questionnaires: 11 (16.9%) had HD and 54 (83.1%) had an ARM. Nineteen patients reported some degree of erectile dysfunction per IIEF criteria, a greater proportion of whom have ARM (p = 0.046). Twenty (30.7%) have reported having children; there were no differences in rates between HD and ARM patients. Most patients had not attempted to conceive, but eight patients, all of whom have ARM, have pursued fertility investigation or treatments., Conclusion: More patients with ARM reported some degree of erectile dysfunction compared to those with HD. Additionally, some have required fertility treatments. Further investigation is warranted to ensure true low rates of sexual and fertility dysfunction in patients with HD., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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44. The effect of an enhanced recovery protocol in pediatric patients who undergo colostomy closure and Malone procedures.
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Reppucci ML, Wehrli LA, Schletker J, Nolan MM, Rieck J, Fares S, Ketzer J, Rove K, Pena A, de la Torre L, and Bischoff A
- Subjects
- Humans, Child, Retrospective Studies, Length of Stay, Colostomy, Postoperative Complications epidemiology, Postoperative Complications etiology, Analgesics, Opioid, Colorectal Neoplasms complications
- Abstract
Purpose: Pediatric colorectal studies have shown enhanced recovery after surgery (ERAS) protocols can safely improve outcomes. This study sought to determine the impact of an ERAS pathway on the outcomes of children with colorectal conditions who underwent colostomy closure or Malone procedure., Methods: A single-institution, retrospective cohort study of children who underwent colostomy closure or Malone procedure between 2016 and 2020 was performed. Differences in outcomes between pre-ERAS and ERAS cohorts were tested. A sub-analysis based on procedure type was performed., Results: There were 96 patients included: 22 prior to ERAS implementation and 74 after. Patients who underwent ERAS had shorter mean time (hours) to oral intake, mean days until regular diet, post-operative opioid volume, and median length of stay (p < 0.05). There was no difference in complication rates in the ERAS and pre-ERAS cohort (12.2 vs 9.1%, p = 0.99). Patients who underwent colostomy closure after ERAS had lower post-operative opioid use, but no differences were seen in those who underwent Malone., Conclusion: Implementation of an ERAS protocol resulted in quicker time to oral intake, normal diet, and decreased opioid use without increasing complication rates. Differences seen based on procedure type may reflect that the effect of an ERAS protocol is procedure specific., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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45. Pelvic exams and cervical cancer screening in patients with anorectal malformations.
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Wehrli LA, Bischoff A, De La Torre L, Reppucci ML, Ketzer J, Peña A, and Alaniz VI
- Subjects
- Humans, Female, Young Adult, Adult, Middle Aged, Aged, Aged, 80 and over, Gynecological Examination, Early Detection of Cancer, Cross-Sectional Studies, Pain, Anorectal Malformations complications, Anorectal Malformations diagnosis, Uterine Cervical Neoplasms complications, Uterine Cervical Neoplasms diagnosis
- Abstract
Purpose: Congenital or acquired anatomic differences of the genital tract in patients with anorectal malformations (ARM) may make pelvic exams more challenging. The purpose of this study was to describe office-based pelvic exams and cervical cancer screening among female patients with a history of ARM., Methods: This was an IRB approved, cross-sectional study of female patients with ARM who completed our Reproductive Health Surveys from November 2021 to March 2022., Results: Fifty-four patients with ARM were included in the study. Ages ranged from 22 to 80 years (mean age 34.5 years). Thirty-four patients had a cloaca, 16 had an ARM other than cloaca, and four patients had a complex malformation. Most patients (79.6%) reported having had a pelvic exam in the office. On a scale of 0-100, the mean pain score with pelvic exam was 42. Pain scores were higher for patients with complex malformations and neo-vagina. Forty-three participants (79.6%) had cervical cancer screening. Fifteen participants (28%) had a didelphys uterus but only two patients specified that both cervices were screened for cervical cancer., Conclusion: The majority of female patients with ARM had cervical cancer screening in clinic, those with complex malformations reported greater discomfort. Providers should be aware of barriers to performing pelvic exams in patients with ARM as well as the need to screen both cervices in didelphys uterus., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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46. Long-term outcomes of adult patients following surgery for congenital colorectal conditions: analysis of psychosocial functioning.
- Author
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Judd-Glossy L, Ariefdjohan M, Ketzer J, Wehrli LA, Pena A, de la Torre L, and Bischoff A
- Subjects
- Adult, Male, Humans, Female, Depression epidemiology, Psychosocial Functioning, Anxiety, Quality of Life psychology, Anorectal Malformations surgery, Colorectal Neoplasms surgery
- Abstract
Purpose: This study aimed to obtain information about the psychosocial functioning of adults with various congenital colorectal conditions (e.g., anorectal malformation, Hirschsprung disease)., Methods: A research registry of adult patients with colorectal conditions was developed. Items included demographics, medical diagnosis/treatment, and measures of anxiety and depression. Descriptive and inferential statistical approaches were applied to summarize data and determine significant differences in the average scores for depression and anxiety between various groupings of diagnoses, gender, race, and the use of psychotropic medication., Results: Study measures were completed by 131 adults. Depression and anxiety scores were significantly higher for women than men and those self-identified as non-binary (p = 0.012, < 0.001, respectively). No significant differences in depression and anxiety scores were found due to colorectal diagnosis (p > 0.05). Participants who identified as Asian had significantly higher depression scores than participants of other races (p = 0.002); but no significant difference was noted for anxiety scores (p = 0.065)., Conclusions: Results suggest that depression and anxiety scores were significantly influenced by gender and race. However, colorectal diagnosis was not a predictor of depression or anxiety. It is important for colorectal providers to be aware of the psychosocial implications of congenital colorectal conditions and consider how to provide adequate support to address patients' psychosocial needs., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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47. Stricture rate in patients after the repair of anorectal malformation following a standardized dilation protocol.
- Author
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Wehrli LA, Reppucci ML, Ketzer J, de la Torre L, Peña A, and Bischoff A
- Subjects
- Male, Female, Humans, Infant, Infant, Newborn, Child, Preschool, Child, Constriction, Pathologic surgery, Constriction, Pathologic complications, Dilatation, Rectum surgery, Rectum abnormalities, Anal Canal surgery, Anal Canal abnormalities, Retrospective Studies, Postoperative Complications etiology, Anorectal Malformations surgery, Anorectal Malformations complications, Anus, Imperforate surgery, Laparoscopy methods, Rectal Fistula surgery, Urinary Bladder Fistula complications, Urethral Diseases surgery, Urinary Fistula surgery
- Abstract
Purpose: The aim of this study was to determine and analyze the stricture rate in patients who underwent a PSARP or PSARVUP and followed a postoperative protocol of anal dilation (Fig. 1)., Methods: A retrospective review of patients with anorectal malformation (ARM) who underwent a primary PSARP or PSARVUP from February 2016 to October 2021 was performed. Data collected included patients' demographics, type of ARM, age at the time of operation, postoperative complications, with emphasis on whether there were any strictures or any difficulties during dilations, and on follow-up. During the surgical repair, emphasis was placed on preserving the blood supply of the bowel and performing a tension-free bowel-to-skin anastomosis., Results: Eighty-four patients met the inclusion criteria. Forty-four patients were females: 21 recto-perineal fistula, 12 cloaca, 9 recto-vestibular fistula, one imperforate anus without fistula, and one patient had a complex anorectal and vaginal malformation with an anal stricture and a rectovaginal fistula. Forty patients were males: 14 recto-perineal fistula, 11 recto-urethral bulbar fistula, 6 recto-urethral prostatic fistula, 6 imperforate anus without fistula, and 2 bladder neck fistula. One patient had an anal stenosis with sacral agenesis, without a presacral mass. Patient ages ranged from 0 to 79 months (mean 7.5 months, median 5 months) at the time of surgery. Follow-up time ranged from 7 to 73 months (mean 38 months, median 35 months). No patient suffered of a postoperative anal stricture. Six patients suffered of a rectal prolapse that required a surgical repair., Conclusion: Post-operative anal stricture after PSARP and PSARVUP can be avoided with proper surgical technique and postoperative care. Namely, by preserving adequate blood supply of the bowel and avoiding tension at the anoplasty, and by adhering to a structured protocol of anal dilations., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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48. Plasma Sequencing for Patients with GIST-Limitations and Opportunities in an Academic Setting.
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Falkenhorst J, Grunewald S, Krzeciesa D, Herold T, Ketzer J, Christoff M, Hamacher R, Kostbade K, Treckmann J, Köster J, Farzaliyev F, Fletcher BS, Dieckmann N, Kaths M, Mühlenberg T, Schildhaus HU, and Bauer S
- Abstract
Circulating tumor DNA (ctDNA) from circulating free DNA (cfDNA) in GIST is of interest for the detection of heterogeneous resistance mutations and treatment monitoring. However, methodologies for use in a local setting are not standardized and are error-prone and difficult to interpret. We established a workflow to evaluate routine tumor tissue NGS (Illumina-based next generation sequencing) panels and pipelines for ctDNA sequencing in an academic setting. Regular blood collection (Sarstedt) EDTA tubes were sufficient for direct processing whereas specialized tubes (STRECK) were better for transportation. Mutation detection rate was higher in automatically extracted (AE) than manually extracted (ME) samples. Sensitivity and specificity for specific mutation detection was higher using digital droplet (dd)PCR compared to NGS. In a retrospective analysis of NGS and clinical data (133 samples from 38 patients), cfDNA concentration correlated with tumor load and mutation detection. A clinical routine pipeline and a novel research pipeline yielded different results, but known and resistance-mediating mutations were detected by both and correlated with the resistance spectrum of TKIs used. In conclusion, NGS routine panel analysis was not sensitive and specific enough to replace solid biopsies in GIST. However, more precise methods (hybridization capture NGS, ddPCR) may comprise important research tools to investigate resistance. Future clinical trials need to compare methodology and protocols.
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- 2022
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49. The pediatric surgery match from the applicant perspective.
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Roach JP, Derderian SC, Ketzer J, Benge M, Kaizer A, and Bischoff A
- Subjects
- Child, Humans, Infant, Newborn, Surveys and Questionnaires, Internship and Residency, Specialties, Surgical
- Abstract
Background: Previous studies have examined characteristics critical to make a successful applicant in the pediatric surgery match. No previous study has focused on what applicants consider important as they interview pediatric surgery training programs., Study Design: Successfully matched applicants to our training program from 2018 to 2020 were identified and a 49-question survey sent electronically. In addition to a descriptive analysis of responses, comparisons between those who matched into one of their top three programs and those who matched outside of their top three programs were made. A Likert scale was used and data are reported as mean (95% confidence intervals)., Results: One hundred and thirty individuals were surveyed. Sixty-three (48%) responded. The most important characteristics identified were total index case volume 1.94 (1.87, 2.00), interactions with faculty on the interview day 1.84 (1.74, 1.94), neonatal case volume 1.75 (1.61, 1.88) and degree of autonomy 1.63 (1.50, 1.77). Respondents also placed a high importance on the in-person interview experience 1.63 (1.49, 1.77). The least important training program characteristics were quantity of vacation time -0.24 (-0.52, 0.05), opportunity to participate in medical mission trips -0.25 (-0.54, 0.06), paid accommodation at the interview -0.29 (-0.57, 0.00), and access to a simulation laboratory -0.51 (-0.78, -0.24)., Conclusion: Clinical volume, neonatal volume, faulty interactions and the experience on the interview day are the most important characteristics to applicants. There were few, if any, characteristics applicants felt were truly unimportant as they weighed their rank lists. Applicants also placed a high level of importance on an in-person interview LEVEL OF EVIDENCE: Level IV., (Copyright © 2022. Published by Elsevier Inc.)
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- 2022
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50. Mutational landscape of high-grade B-cell lymphoma with MYC- , BCL2 and/or BCL6 rearrangements characterized by whole-exome sequencing.
- Author
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Künstner A, Witte HM, Riedl J, Bernard V, Stölting S, Merz H, Olschewski V, Peter W, Ketzer J, Busch Y, Trojok P, Bubnoff NV, Busch H, Feller AC, and Gebauer N
- Subjects
- Gene Rearrangement, Humans, Mutation, Proto-Oncogene Proteins c-bcl-2 genetics, Proto-Oncogene Proteins c-bcl-6 genetics, Proto-Oncogene Proteins c-myc genetics, Exome Sequencing, Lymphoma, Follicular pathology, Lymphoma, Large B-Cell, Diffuse genetics, Lymphoma, Large B-Cell, Diffuse pathology
- Abstract
High-grade B-cell lymphoma accompanied with double/triple-hit MYC and BCL2 and/or BCL6 rearrangements (HGBLDH/ TH) poses a cytogenetically-defined provisional entity among aggressive B-cell lymphomas that is traditionally associated with unfavorable prognosis. In order to better understand the mutational and molecular landscape of HGBLDH/ TH we here performed whole-exome sequencing and deep panel next-generation sequencing of 47 clinically annotated cases. Oncogenic drivers, mutational signatures and perturbed pathways were compared with data from follicular lymphoma (FL), diffuse large B-cell lymphoma (DLBCL) and Burkitt lymphoma (BL). We find an accumulation of oncogenic mutations in NOTCH, IL6/JAK/STAT and NFκB signaling pathways and delineate the mutational relationship within the continuum between FL/DLBCL, HGBL-DH/TH and BL. Further, we provide evidence of a molecular divergence between BCL2 and BCL6 rearranged HGBL-DH. Beyond a significant congruency with the C3/EZB DLBCL cluster in BCL2 rearranged cases on an exome-wide level, we observe an enrichment of the SBS6 mutation signature in BCL6 rearranged cases. Differential gene set enrichment and subsequent network propagation analysis according to cytogenetically defined subgroups revealed an impairment of TP53 and MYC pathway signaling in BCL2 rearranged cases, whereas BCL6 rearranged cases lacked this enrichment, but instead showed impairment of E2F targets. Intriguingly, HGBL-TH displayed intermediate mutational features considering all three aspects. This study elucidates a recurrent pattern of mutational events driving FL into MYC-driven BCL2-rearranged HGBL, unveiling the mutational pathogenesis of this provisional entity. Through this refinement of the molecular taxonomy for aggressive, germinal center-derived B-cell lymphomas, this calls into question the current World Health Organization classification system, especially regarding the status of MYC/BCL6- rearranged HGBL.
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- 2022
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