25 results on '"Meinel D"'
Search Results
2. In-situ pore size investigations of loaded porous concrete with non-destructive methods
- Author
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Rifai, H., Staude, A., Meinel, D., Illerhaus, B., and Bruno, G.
- Published
- 2018
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3. Ambient occlusion – A powerful algorithm to segment shell and skeletal intrapores in computed tomography data
- Author
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Titschack, J., Baum, D., Matsuyama, K., Boos, K., Färber, C., Kahl, W.-A., Ehrig, K., Meinel, D., Soriano, C., and Stock, S.R.
- Published
- 2018
- Full Text
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4. In vivo XCT bone characterization of lattice structured implants fabricated by additive manufacturing
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Obaton, A-F., Fain, J., Djemaï, M., Meinel, D., Léonard, F., Mahé, E., Lécuelle, B., Fouchet, J-J., and Bruno, G.
- Published
- 2017
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5. A case of pharyngeal diphtheria in Germany, June 2015
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Berger, A., Meinel, D. M., Schaffer, A., Ziegler, R., Pitteroff, J., Konrad, R., and Sing, Andreas
- Published
- 2016
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6. AB1693 RECOMBINANT CALPROTECTIN IN A CONTROLLABLE OLIGOMERIC STATE COULD HELP TO HARMONIZE MRP-8/MRP-14 IMMUNOASSAYS
- Author
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Ohmann, A., Guschin, D., Afonso, J., Spies, P., Tobler, D., Villiger, T., Meinel, D., and Gerhold, C.B.
- Published
- 2023
- Full Text
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7. Nb3Sn wire shape and cross-sectional area inhomogeneity in Rutherford cables
- Author
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Kelly, U., Richter, S., Redenbach, C., Schladitz, Katja, Scheuerlein, C., Wolf, F., Ebermann, P., Lackner, F., Schoerling, D., Meinel, D., and Publica
- Abstract
During Rutherford cable production, the wires are plastically deformed and their initially round shape is distorted. Using X-ray absorption tomography, we have determined the three-dimensional shape of an unreacted Nb3Sn 11-T dipole Rutherford cable and of a reacted and impregnated Nb3Sn cable double stack. State-of-the-art image processing was applied to correct for tomographic artifacts caused by the large cable aspect ratio, for the segmentation of the individual wires and subelement bundles inside the wires, and for the calculation of the wire cross-sectional area and shape variations. The 11-T dipole cable cross section oscillates by 2% with a frequency of 1.24 mm (1/80 of the transposition pitch length of the 40 wire cable). A comparatively stronger cross-sectional area variation is observed in the individual wires at the thin edge of the keystoned cable where the wire aspect ratio is largest.
- Published
- 2018
8. Economic analysis of geothermal combined heat and power processes
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Meinel, D., Wieland, C., Spliethoff, H., and Lehrstuhl für Energiesysteme
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ddc - Abstract
Despite huge potentials of geothermal energy the share on worldwide electricity and heat provision is small, which is mainly caused by unfavorable economic boundary conditions. In this study, combinations of combined heat and power systems and working fluids, which perform best from a thermodynamic point of view, are evaluated by means of economic parameters based on VDI standard 2067. The objective is the evaluation of levelized cost of electricity and heat respectively. In detail, effects of electricity and heat price factors, thermal water temperatures and drilling costs on economic efficiency are focused. A trade-off between economic and thermodynamic goals is discussed. Based on a realistic cost structure of geothermal energy systems economic operations are feasible within typical life spans of projects. Annual energy sales are strongly influenced by the applied drilling cost correlation and are calculated to three to five Mio. Euro. In order to generate heat and electricity sales the heat generation represents the limiting process.
- Published
- 2014
9. RECOMBINANT CALPROTECTIN IN A CONTROLLABLE OLIGOMERIC STATE COULD HELP TO HARMONIZE MRP-8/MRP-14 IMMUNOASSAYS.
- Author
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Ohmann, A., Guschin, D., Afonso, J., Spies, P., Tobler, D., Villiger, T., Meinel, D., and Gerhold, C. B.
- Published
- 2023
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10. Exergo-economic comparison of ORC concepts at different Scales
- Author
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Wieland, C., Meinel, D., and Spliethoff, H.
- Subjects
ddc - Published
- 2012
11. Investigation of chloride-induced pitting corrosion of steel in concrete with innovative methods.
- Author
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Ebell, G., Burkert, A., Fischer, J., Lehmann, J., Müller, T., Meinel, D., and Paetsch, O.
- Subjects
ELECTROCHEMICAL analysis ,COMPUTED tomography ,ALKALINE earth compounds ,REINFORCING bars ,POLARIZATION (Social sciences) - Abstract
The combination of electrochemical and 3D computed tomography (CT) investigations offers the possibility of verifying electrochemical measurements non-destructively. Determining the steel surfaces damaged by pitting corrosion allows developing specimens having damage pattern corresponding to practice. Corrosion phenomena like decoupled pitting corrosion cannot be verified by electrochemical measurements only, but with the combination of those two kinds of investigations it is possible. Another advantage is the minimization of the number of samples. The classical experimental procedure requires the destruction of samples after each damage step. This can be avoided by the use of 3D computed tomography. As long as the corrosion phenomena are completely within the examination zone shown by the 3D computed tomography, the electrochemical measurements can be calculated on an area basis to get the specific corrosion rate or polarization resistance. [ABSTRACT FROM AUTHOR]
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- 2016
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12. Morphology of corrosion products of steel in concrete under macro-cell and self-corrosion conditions.
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Neff, D., Harnisch, J., Beck, M., L'Hostis, V., Goebbels, J., and Meinel, D.
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- 2011
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13. Fast neutron radiography and tomography of wood.
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Osterloh, K., Raedel, C., Zscherpel, U., Meinel, D., Ewert, Uwe, Buecherl, T., and Hasenstab, A.
- Subjects
X-rays ,TOMOGRAPHY ,LIGHT elements ,NEUTRONS ,GAMMA rays ,RADIOGRAPHY - Abstract
Wood is the material that has accompanied the whole development of mankind in various applications, for manufacturing tools and weapons, for buildings and constructions and also as fuel. It has various appearances and is subjected to decomposing changes, so there are sufficient arguments for non-destructive testing of wooden objects in the same way as is common practice with other technologically used materials. However, even today wood is rarely tested. Moreover, artefacts of cultural heritage containing wood are rare and delicate, so dismantling these for studying purposes is undesirable. Radiological inspection technologies are the methods of choice to provide a non-destructive insight. Interrogations of a specimen with various kinds of radiation provide different answers about their internal structures. High-quality detailed images are achievable with X-rays or gamma radiation in cases where heavy metals or other dense materials are not involved. Neutrons behave complementarily; they are avidly absorbed by light elements such as hydrogen on the one hand and yet are capable of easily penetrating heavy metals on the other. This provides an alternative for X-ray radiography and tomography when material characteristics are of primary interest rather than structural details, or when shielding with plates or sleeves of heavy metal severely impedes inspections with X-ray or gamma radiation technologies. However, due to the moderating effect of wooden samples it is essential to use fast neutrons for radiography and tomography of voluminous objects. Some typical examples described here will show the difference between neutron and X-ray photon-based radiographic technologies. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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14. Trans-Atlantic exchanges have shaped the population structure of the Lyme disease agent Borrelia burgdorferi sensu stricto.
- Author
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Castillo-Ramírez, S., Fingerle, V., Jungnick, S., Straubinger, R. K., Krebs, S., Blum, H., Meinel, D. M., Hofmann, H., Guertler, P., Sing, A., and Margos, G.
- Published
- 2016
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15. Sacrifice Few to Save Many: Fire Protective Interlayers in Carbon-Fiber-Reinforced Laminates.
- Author
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Tabaka W, Meinel D, and Schartel B
- Abstract
The fire protection of carbon-fiber-reinforced polymer (CFRP) laminates often relies on flame-retardant coatings, but in some applications, their efficacy may diminish upon direct fire exposure due to rapid pyrolysis. This study introduces an innovative approach by integrating protective interlayers within the laminate structure to enhance the fire resistance. Various materials, including ceramic composite WHIPOX, titanium foil, poly(ether imide) (PEI) foil, basalt fibers, rubber mat, and hemp fibers, were selected as protective interlayers. These interlayers were strategically placed within the laminate layout to form a sacrificial barrier, safeguarding the integrity of the composite. Bench-scale fire resistance tests were conducted, where fire (180 kW/m
2 ) was applied directly to the one side of the specimen by a burner while a compressive load was applied at the same time. Results indicate significant prolongation of time to failure for CFRP laminates with protective interlayers, which is up to 10 times longer. This innovative approach represents a potential advance in fire protection strategies for CFRP laminates, offering improved resilience against fire-induced structural failure., Competing Interests: The authors declare no competing financial interest., (© 2024 The Authors. Published by American Chemical Society.)- Published
- 2024
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16. HLA antibody affinity determination: From HLA-specific monoclonal antibodies to donor HLA specific antibodies (DSA) in patient serum.
- Author
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Hug MN, Keller S, Marty T, Gygax D, Meinel D, Spies P, Handschin J, Kleiser M, Vazquez N, Linnik J, Buchli R, Claas F, Heidt S, Kramer CSM, Bezstarosti S, Lee JH, Schaub S, and Hönger G
- Subjects
- Humans, Antibody Affinity, Reproducibility of Results, HLA Antigens, Alleles, Tissue Donors, Histocompatibility Testing methods, Graft Rejection, Isoantibodies, Antibodies, Monoclonal, Kidney Transplantation
- Abstract
Organs transplanted across donor-specific HLA antibodies (DSA) are associated with a variety of clinical outcomes, including a high risk of acute kidney graft rejection. Unfortunately, the currently available assays to determine DSA characteristics are insufficient to clearly discriminate between potentially harmless and harmful DSA. To further explore the hazard potential of DSA, their concentration and binding strength to their natural target, using soluble HLA, may be informative. There are currently a number of biophysical technologies available that allow the assessment of antibody binding strength. However, these methods require prior knowledge of antibody concentrations. Our objective within this study was to develop a novel approach that combines the determination of DSA-affinity as well as DSA-concentration for patient sample evaluation within one assay. We initially tested the reproducibility of previously reported affinities of human HLA-specific monoclonal antibodies and assessed the technology-specific precision of the obtained results on multiple platforms, including surface plasmon resonance (SPR), bio-layer interferometry (BLI), Luminex (single antigen beads; SAB), and flow-induced dispersion analysis (FIDA). While the first three (solid-phase) technologies revealed comparable high binding-strengths, suggesting measurement of avidity, the latter (in-solution) approach revealed slightly lower binding-strengths, presumably indicating measurement of affinity. We believe that our newly developed in-solution FIDA-assay is particularly suitable to provide useful clinical information by not just measuring DSA-affinities in patient serum samples but simultaneously delivering a particular DSA-concentration. Here, we investigated DSA from 20 pre-transplant patients, all of whom showed negative CDC-crossmatch results with donor cells and SAB signals ranging between 571 and 14899 mean fluorescence intensity (MFI). DSA-concentrations were found in the range between 11.2 and 1223 nM (median 81.1 nM), and their measured affinities fall between 0.055 and 24.7 nM (median 5.34 nM; 449-fold difference). In 13 of 20 sera (65%), DSA accounted for more than 0.1% of total serum antibodies, and 4/20 sera (20%) revealed a proportion of DSA even higher than 1%. To conclude, this study strengthens the presumption that pre-transplant patient DSA consists of various concentrations and different net affinities. Validation of these results in a larger patient cohort with clinical outcomes will be essential in a further step to assess the clinical relevance of DSA-concentration and DSA-affinity., (© 2023 The Authors. HLA: Immune Response Genetics published by John Wiley & Sons Ltd.)
- Published
- 2023
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17. Different Approaches for Manufacturing Ti-6Al-4V Alloy with Triply Periodic Minimal Surface Sheet-Based Structures by Electron Beam Melting.
- Author
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Khrapov D, Kozadayeva M, Manabaev K, Panin A, Sjöström W, Koptyug A, Mishurova T, Evsevleev S, Meinel D, Bruno G, Cheneler D, Surmenev R, and Surmeneva M
- Abstract
Targeting biomedical applications, Triply Periodic Minimal Surface (TPMS) gyroid sheet-based structures were successfully manufactured for the first time by Electron Beam Melting in two different production Themes, i.e., inputting a zero (Wafer Theme) and a 200 µm (Melt Theme) wall thickness. Initial assumption was that in both cases, EBM manufacturing should yield the structures with similar mechanical properties as in a Wafer-mode, as wall thickness is determined by the minimal beam spot size of ca 200 µm. Their surface morphology, geometry, and mechanical properties were investigated by means of electron microscopy (SEM), X-ray Computed Tomography (XCT), and uniaxial tests (both compression and tension). Application of different manufacturing Themes resulted in specimens with different wall thicknesses while quasi-elastic gradients for different Themes was found to be of 1.5 GPa, similar to the elastic modulus of human cortical bone tissue. The specific energy absorption at 50% strain was also similar for the two types of structures. Finite element simulations were also conducted to qualitatively analyze the deformation process and the stress distribution under mechanical load. Simulations demonstrated that in the elastic regime wall, regions oriented parallel to the load are primarily affected by deformation. We could conclude that gyroids manufactured in Wafer and Melt Themes are equally effective in mimicking mechanical properties of the bones.
- Published
- 2021
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18. X-ray Computed Tomography Procedures to Quantitatively Characterize the Morphological Features of Triply Periodic Minimal Surface Structures.
- Author
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Evsevleev S, Mishurova T, Khrapov D, Paveleva A, Meinel D, Surmenev R, Surmeneva M, Koptyug A, and Bruno G
- Abstract
Additively manufactured (AM) metallic sheet-based Triply Periodic Minimal Surface Structures (TPMSS) meet several requirements in both bio-medical and engineering fields: Tunable mechanical properties, low sensitivity to manufacturing defects, mechanical stability, and high energy absorption. However, they also present some challenges related to quality control, which can prevent their successful application. In fact, the optimization of the AM process is impossible without considering structural characteristics as manufacturing accuracy, internal defects, as well as surface topography and roughness. In this study, the quantitative non-destructive analysis of TPMSS manufactured from Ti-6Al-4V alloy by electron beam melting was performed by means of X-ray computed tomography (XCT). Several advanced image analysis workflows are presented to evaluate the effect of build orientation on wall thicknesses distribution, wall degradation, and surface roughness reduction due to the chemical etching of TPMSS. It is shown that the manufacturing accuracy differs for the structural elements printed parallel and orthogonal to the manufactured layers. Different strategies for chemical etching show different powder removal capabilities and both lead to the loss of material and hence the gradient of the wall thickness. This affects the mechanical performance under compression by reduction of the yield stress. The positive effect of the chemical etching is the reduction of the surface roughness, which can potentially improve the fatigue properties of the components. Finally, XCT was used to correlate the amount of retained powder with the pore size of the functionally graded TPMSS, which can further improve the manufacturing process.
- Published
- 2021
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19. X-ray imaging techniques for inspection of composite pipelines.
- Author
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Silva W, Lopes R, Zscherpel U, Meinel D, and Ewert U
- Abstract
The literature has shown that the application of laminography provides advantages as 3D radiographic imaging with depth information for in house and mobile testing. This permits to distinguish between overlapping indications, measure the extension along radiation direction and classify indications as surface open or subsurface ones as required in critical engineering assessment. This work provides a comparative study and measurements of the three techniques Digital Radiography (DR) with Digital Detector Arrays (DDA), Coplanar Translational Laminography (CTL) and Computed Tomography (CT), applied for composite pipeline inspection. It is demonstrated that CTL and CT provide advantages for the evaluation of pipe-to-pipe connections and the evaluation of adhesive applications. They show indications of discontinuities with higher contrast sensitivity than radiography. Beyond it, two specimen, namely Phantom 1 and Phantom 2, were developed and manufactured by additive manufacturing to analyze the preferential detection sensitivity and the direction of features and depth information for laminographic measurements. Another goal was to show the laminographic capabilities to distinguish between overlapping discontinuities. CTL is especially suitable for mobile inspection. Special glass fiber reinforced polymer samples (GRP) were manufactured for further analysis and comparisons between the abovementioned techniques. Finally, Phantoms 1 and 2 show the capability of laminography to detect overlapping indications and also show that discontinuities oriented perpendicular to the scan direction have the highest contrast sensitivity for laminographic measurements., (Copyright © 2021 Elsevier Ltd. All rights reserved.)
- Published
- 2021
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20. A Wireless Angle and Position Tracking Concept for Live Data Control of Advanced, Semi-Automated Manufacturing Processes.
- Author
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Lipka M, Meinel D, Müller S, Sippel E, Franke J, and Vossiek M
- Subjects
- Algorithms, Automation, Electromagnetic Phenomena, Humans, Ergonomics, Wireless Technology
- Abstract
Despite recent industrial automation advances, small series production still requires a considerable amount of manual work, and training,and monitoring of workers is consuming a significant amount of time and manpower. Adopting live monitoring of the stages in manual production, along with the comprehensive representation of production steps, may help resolve this problem. For ergonomic live support, the overall system presented in this paper combines localization, torque control, and a rotation counter in a novel approach to monitor of semi-automated manufacturing processes. A major challenge in this context is tracking, especially hand-guided tools, without the disruptions and restrictions necessary with rigid position encoders. In this paper, a promising measurement concept involving wireless wave-based sensors for close-range position tracking in industrial surroundings is proposed. By using simple beacons, the major share of processing is transferred to fixed nodes, allowing for reduced hardware size and power consumption for the wireless mobile units. This requires designated localization approaches relying on only relative phase information, similar to the proposed Kalman-filter-based-beam-tracking approach. Measurement results show a beam-tracking accuracy of about 0.58 ∘ in azimuth and 0.89 ∘ in elevation, resulting in an overall tracking accuracy of about 3.18 cm.
- Published
- 2020
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21. Transmission of ESBL-producing Enterobacteriaceae and their mobile genetic elements-identification of sources by whole genome sequencing: study protocol for an observational study in Switzerland.
- Author
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Stadler T, Meinel D, Aguilar-Bultet L, Huisman JS, Schindler R, Egli A, Seth-Smith HMB, Eichenberger L, Brodmann P, Hübner P, Bagutti C, and Tschudin-Sutter S
- Subjects
- Community-Acquired Infections microbiology, Cross Infection, Humans, Prospective Studies, Research Design, Retrospective Studies, Switzerland epidemiology, Tertiary Care Centers, Whole Genome Sequencing, beta-Lactamases metabolism, Community-Acquired Infections transmission, Enterobacteriaceae genetics, Enterobacteriaceae isolation & purification, Enterobacteriaceae Infections transmission, Interspersed Repetitive Sequences, beta-Lactamases genetics
- Abstract
Introduction: Extended-spectrum beta-lactamases (ESBL)-producing Enterobacteriaceae were first described in relation with hospital-acquired infections. In the 2000s, the epidemiology of ESBL-producing organisms changed as especially ESBL-producing Escherichia coli was increasingly described as an important cause of community-acquired infections, supporting the hypothesis that in more recent years ESBL-producing Enterobacteriaceae have probably been imported into hospitals rather than vice versa. Transmission of ESBL-producing Enterobacteriaceae is complicated by ESBL genes being encoded on self-transmissible plasmids, which can be exchanged among the same and different bacterial species. The aim of this research project is to quantify hospital-wide transmission of ESBL-producing Enterobacteriaceae on both the level of bacterial species and the mobile genetic elements and to determine if hospital-acquired infections caused by ESBL producers are related to strains and mobile genetic elements predominantly circulating in the community or in the healthcare setting. This distinction is critical in prevention since the former emphasises the urgent need to establish or reinforce antibiotic stewardship programmes, and the latter would call for more rigorous infection control., Methods and Analysis: This protocol presents an observational study that will be performed at the University Hospital Basel and in the city of Basel, Switzerland. ESBL-producing Enterobacteriaceae will be collected from any specimens obtained by routine clinical practice or by active screening in both inpatient and outpatient settings, as well as from wastewater samples and foodstuffs, both collected monthly over a 12-month period for analyses by whole genome sequencing. Bacterial chromosomal, plasmid and ESBL-gene sequences will be compared within the cohort to determine genetic relatedness and migration between humans and their environment., Ethics and Dissemination: This study has been approved by the local ethics committee (Ethikkommission Nordwest-und Zentralschweiz) as a quality control project (Project-ID 2017-00100). The results of this study will be published in peer-reviewed medical journals, communicated to participants, the general public and all relevant stakeholders., Competing Interests: Competing interests: ST-S is a member of the Astellas Fidaxomicin Advisory Board and a member of the MSD C. difficile Advisory Board. She has received unrestricted research grants from Astellas., (© Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.)
- Published
- 2018
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22. Associations among Antibiotic and Phage Resistance Phenotypes in Natural and Clinical Escherichia coli Isolates.
- Author
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Allen RC, Pfrunder-Cardozo KR, Meinel D, Egli A, and Hall AR
- Subjects
- Animals, Escherichia coli genetics, Escherichia coli pathogenicity, Evolution, Molecular, Genome, Bacterial drug effects, Humans, Phage Therapy, Phenotype, Plasmids, Receptors, Virus metabolism, Anti-Bacterial Agents pharmacology, Coliphages physiology, Drug Resistance, Bacterial genetics, Escherichia coli drug effects, Escherichia coli virology, Escherichia coli Infections microbiology
- Abstract
The spread of antibiotic resistance is driving interest in new approaches to control bacterial pathogens. This includes applying multiple antibiotics strategically, using bacteriophages against antibiotic-resistant bacteria, and combining both types of antibacterial agents. All these approaches rely on or are impacted by associations among resistance phenotypes (where bacteria resistant to one antibacterial agent are also relatively susceptible or resistant to others). Experiments with laboratory strains have shown strong associations between some resistance phenotypes, but we lack a quantitative understanding of associations among antibiotic and phage resistance phenotypes in natural and clinical populations. To address this, we measured resistance to various antibiotics and bacteriophages for 94 natural and clinical Escherichia coli isolates. We found several positive associations between resistance phenotypes across isolates. Associations were on average stronger for antibacterial agents of the same type (antibiotic-antibiotic or phage-phage) than different types (antibiotic-phage). Plasmid profiles and genetic knockouts suggested that such associations can result from both colocalization of resistance genes and pleiotropic effects of individual resistance mechanisms, including one case of antibiotic-phage cross-resistance. Antibiotic resistance was predicted by core genome phylogeny and plasmid profile, but phage resistance was predicted only by core genome phylogeny. Finally, we used observed associations to predict genes involved in a previously uncharacterized phage resistance mechanism, which we verified using experimental evolution. Our data suggest that susceptibility to phages and antibiotics are evolving largely independently, and unlike in experiments with lab strains, negative associations between antibiotic resistance phenotypes in nature are rare. This is relevant for treatment scenarios where bacteria encounter multiple antibacterial agents. IMPORTANCE Rising antibiotic resistance is making it harder to treat bacterial infections. Whether resistance to a given antibiotic spreads or declines is influenced by whether it is associated with altered susceptibility to other antibiotics or other stressors that bacteria encounter in nature, such as bacteriophages (viruses that infect bacteria). We used natural and clinical isolates of Escherichia coli , an abundant species and key pathogen, to characterize associations among resistance phenotypes to various antibiotics and bacteriophages. We found associations between some resistance phenotypes, and in contrast to past work with laboratory strains, they were exclusively positive. Analysis of bacterial genome sequences and horizontally transferred genetic elements (plasmids) helped to explain this, as well as our finding that there was no overall association between antibiotic resistance and bacteriophage resistance profiles across isolates. This improves our understanding of resistance evolution in nature, potentially informing new rational therapies that combine different antibacterials, including bacteriophages., (Copyright © 2017 Allen et al.)
- Published
- 2017
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23. Comparison of two rapid biochemical tests and four chromogenic selective media for detection of carbapenemase-producing Gram-negative bacteria.
- Author
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Hinić V, Amrein I, Stammler S, Heckendorn J, Meinel D, Frei R, and Egli A
- Subjects
- Chromogenic Compounds, Colorimetry methods, Culture Media chemistry, Gram-Negative Bacteria classification, Gram-Negative Bacteria growth & development, Gram-Negative Bacterial Infections microbiology, Humans, Reagent Kits, Diagnostic, Sensitivity and Specificity, Time Factors, Bacterial Proteins analysis, Bacteriological Techniques instrumentation, Bacteriological Techniques methods, Gram-Negative Bacteria enzymology, Gram-Negative Bacterial Infections diagnosis, beta-Lactamases analysis
- Abstract
We evaluated RAPIDEC® CARBA NP, Neo-Rapid CARB, chromID® CARBA SMART (CARB/OXA), Brilliance™ CRE/ESBL, ChromArt CRE and BBL™ CHROMagar™ CPE for the detection of carbapenemase-producing bacteria. The analytical sensitivity of RAPIDEC® CARBA NP was better than that of Neo-Rapid CARB. A combination of carbapenemase and ESBL screening plates could be advantageous., (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Published
- 2017
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24. A Cross-Sectional Study of Colonization Rates with Methicillin-Resistant Staphylococcus aureus (MRSA) and Extended-Spectrum Beta-Lactamase (ESBL) and Carbapenemase-Producing Enterobacteriaceae in Four Swiss Refugee Centres.
- Author
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Piso RJ, Käch R, Pop R, Zillig D, Schibli U, Bassetti S, Meinel D, and Egli A
- Subjects
- Afghanistan, Bacterial Proteins metabolism, Carrier State epidemiology, Cross-Sectional Studies, Enterobacteriaceae enzymology, Enterobacteriaceae Infections microbiology, Humans, Middle East, Prevalence, Staphylococcal Infections microbiology, Switzerland, Syria, beta-Lactamases metabolism, Enterobacteriaceae isolation & purification, Enterobacteriaceae Infections epidemiology, Methicillin-Resistant Staphylococcus aureus isolation & purification, Refugees, Staphylococcal Infections epidemiology
- Abstract
Background: The recent crisis of refugees seeking asylum in European countries challenges public health on many levels. Most refugees currently arrive from Syria, Afghanistan, or Eritrea. Data about multidrug resistant bacteria (MDR) prevalence are not present for these countries. However, when entering the European heath care systems, data about colonisation rates regarding highly resistant bacterial pathogens are important., Methods: We performed a cross-sectional screening in four Swiss refugee centres to determine the colonization rates for MRSA and ESBL- and carbapenemase-producing Enterobacteriaceae. We used pharyngeal, nasal, and inguinal swabs for MRSA and rectal swabs and urine for ESBL and carbapenemase screening using standard microbiological procedures. Whole genome sequencing (WGS) was used to determine the relatedness of MRSA isolates with high resolution due to a suspected outbreak., Results: 41/261(15.7%) refugees were colonized with MRSA. No differences regarding the country of origin were observed. However, in a single centre significantly more were colonized, which was confirmed to be a recent local outbreak. 57/241 (23.7%) refugees were colonized with ESBL with significantly higher colonisation in persons originating from the Middle East (35.1%, p<0.001). No carbapenemase producers were detected., Conclusion: The colonisation rate of the refugees was about 10 times higher for MRSA and 2-5 times higher for ESBL compared to the Swiss population. Contact precaution is warranted for these persons if they enter medical care. In cases of infections, MRSA and ESBL-producing Enterobacteriaceae should be considered regarding antibiotic treatment choices., Competing Interests: US is employed by Bakt. Institut Olten BIO AG. This does not alter our adherence to PLOS ONE policies on sharing data and materials. There are no patents, products in development or marketed products to declare.
- Published
- 2017
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25. Outbreak investigation for toxigenic Corynebacterium diphtheriae wound infections in refugees from Northeast Africa and Syria in Switzerland and Germany by whole genome sequencing.
- Author
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Meinel DM, Kuehl R, Zbinden R, Boskova V, Garzoni C, Fadini D, Dolina M, Blümel B, Weibel T, Tschudin-Sutter S, Widmer AF, Bielicki JA, Dierig A, Heininger U, Konrad R, Berger A, Hinic V, Goldenberger D, Blaich A, Stadler T, Battegay M, Sing A, and Egli A
- Subjects
- Adolescent, Adult, Africa epidemiology, Bacterial Toxins metabolism, Bacterial Typing Techniques, Corynebacterium diphtheriae drug effects, Corynebacterium diphtheriae isolation & purification, Diphtheria drug therapy, Drug Resistance, Multiple, Bacterial genetics, Female, Genes, Bacterial, Germany epidemiology, Humans, Male, Multigene Family, Multilocus Sequence Typing, Phylogeny, Refugees, Switzerland epidemiology, Syria epidemiology, Wound Infection drug therapy, Wound Infection microbiology, Young Adult, Bacterial Toxins genetics, Corynebacterium diphtheriae genetics, Diphtheria epidemiology, Disease Outbreaks, Wound Infection epidemiology
- Abstract
Toxigenic Corynebacterium diphtheriae is an important and potentially fatal threat to patients and public health. During the current dramatic influx of refugees into Europe, our objective was to use whole genome sequencing for the characterization of a suspected outbreak of C. diphtheriae wound infections among refugees. After conventional culture, we identified C. diphtheriae using matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) and investigated toxigenicity by PCR. Whole genome sequencing was performed on a MiSeq Illumina with >70×coverage, 2×250 bp read length, and mapping against a reference genome. Twenty cases of cutaneous C. diphtheriae in refugees from East African countries and Syria identified between April and August 2015 were included. Patients presented with wound infections shortly after arrival in Switzerland and Germany. Toxin production was detected in 9/20 (45%) isolates. Whole genome sequencing-based typing revealed relatedness between isolates using neighbour-joining algorithms. We detected three separate clusters among epidemiologically related refugees. Although the isolates within a cluster showed strong relatedness, isolates differed by >50 nucleotide polymorphisms. Toxigenic C. diphtheriae associated wound infections are currently observed more frequently in Europe, due to refugees travelling under poor hygienic conditions. Close genetic relatedness of C. diphtheriae isolates from 20 refugees with wound infections indicates likely transmission between patients. However, the diversity within each cluster and phylogenetic time-tree analysis suggest that transmissions happened several months ago, most likely outside Europe. Whole genome sequencing offers the potential to describe outbreaks at very high resolution and is a helpful tool in infection tracking and identification of transmission routes., (Copyright © 2016. Published by Elsevier Ltd.)
- Published
- 2016
- Full Text
- View/download PDF
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