8 results on '"Mi Rim Shin"'
Search Results
2. Molecular and Functional Properties of Three Different Peroxiredoxin Isotypes in Chinese Cabbage
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Dae-Jin Yun, Woe Yeon Kim, Young Jun Jung, Junghoon Park, Seol Ki Paeng, Eun Seon Lee, Kang-San Kim, Sang Yeol Lee, Mi Rim Shin, Sun Young Kim, Ganesh M. Nawkar, Punyakishore Maibam, Kyun Oh Lee, and Chang Ho Kang
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biology ,Molecular Sequence Data ,Cell Biology ,General Medicine ,Articles ,Brassica ,Peroxiredoxins ,Malate dehydrogenase ,Isozyme ,Isotype ,Isoenzymes ,Cytosol ,Biochemistry ,Chaperone (protein) ,biology.protein ,Amino Acid Sequence ,Peroxiredoxin ,Molecular Biology ,Gene ,Peroxidase ,Molecular Chaperones - Abstract
Peroxiredoxins (Prxs), which are classified into three isotypes in plants, play important roles in protection systems as peroxidases or molecular chaperones. The three Prx isotypes of Chinese cabbage, namely C1C-Prx, C2C-Prx, and C-PrxII, have recently been identified and characterized. The present study compares their molecular properties and biochemical functions to gain insights into their concerted roles in plants. The three Prx isotype genes were differentially expressed in tissue- and developmental stage-specific manners. The transcript level of the C1C-Prx gene was abundant at the seed stage, but rapidly decreased after imbibitions. In contrast, the C2C-Prx transcript was not detected in the seeds, but its expression level increased at germination and was maintained thereafter. The C-PrxII transcript level was mild at the seed stage, rapidly increased for 10 days after imbibitions, and gradually disappeared thereafter. In the localization analysis using GFP-fusion proteins, the three isotypes showed different cellular distributions. C1C-Prx was localized in the cytosol and nucleus, whereas C2C-Prx and C-Prx were found mainly in the chloroplast and cytosol, respectively. In vitro thiol-dependent antioxidant assays revealed that the relative peroxidase activities of the isotypes were C-PrxII > C2C-Prx > C1C-Prx. C1C-Prx and C2C-Prx, but not C-PrxII, prevented aggregation of malate dehydrogenase as a molecular chaperone. Taken together, these results suggest that the three isotypes of Prx play specific roles in the cells in timely and spatially different manners, but they also cooperate with each other to protect the plant.
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- 2012
3. Inhibitor of Apoptosis (IAP)-like Protein Lacks a Baculovirus IAP Repeat (BIR) Domain and Attenuates Cell Death in Plant and Animal Systems*
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Yong Hoon Chi, Young-Myeong Kim, Mi Rim Shin, Ganesh M. Nawkar, Min Gab Kim, Chang Ho Kang, Jin Ho Park, Il Pyung Ahn, Woe Yeon Kim, Ho Byoung Chae, Sang Yeol Lee, Dae-Jin Yun, Sun Young Kim, Kyun Oh Lee, Young Jun Jung, and Sun Yong Lee
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Programmed cell death ,Apoptosis Inhibitor ,Cell Survival ,Molecular Sequence Data ,Arabidopsis ,Plant Biology ,Caspase 3 ,Apoptosis ,Biology ,Inhibitor of apoptosis ,Biochemistry ,Fumonisins ,Inhibitor of Apoptosis Proteins ,Animals ,Humans ,Amino Acid Sequence ,Molecular Biology ,Inhibitor of apoptosis domain ,Base Sequence ,Cell Death ,Sequence Homology, Amino Acid ,Cell Biology ,DNA ,Plants, Genetically Modified ,Molecular biology ,XIAP ,Protein Structure, Tertiary ,Baculoviral IAP repeat-containing protein 3 ,Baculoviridae ,HeLa Cells ,Plasmids ,Subcellular Fractions - Abstract
A novel Arabidopsis thaliana inhibitor of apoptosis was identified by sequence homology to other known inhibitor of apoptosis (IAP) proteins. Arabidopsis IAP-like protein (AtILP) contained a C-terminal RING finger domain but lacked a baculovirus IAP repeat (BIR) domain, which is essential for anti-apoptotic activity in other IAP family members. The expression of AtILP in HeLa cells conferred resistance against tumor necrosis factor (TNF)-α/ActD-induced apoptosis through the inactivation of caspase activity. In contrast to the C-terminal RING domain of AtILP, which did not inhibit the activity of caspase-3, the N-terminal region, despite displaying no homology to known BIR domains, potently inhibited the activity of caspase-3 in vitro and blocked TNF-α/ActD-induced apoptosis. The anti-apoptotic activity of the AtILP N-terminal domain observed in plants was reproduced in an animal system. Transgenic Arabidopsis lines overexpressing AtILP exhibited anti-apoptotic activity when challenged with the fungal toxin fumonisin B1, an agent that induces apoptosis-like cell death in plants. In AtIPL transgenic plants, suppression of cell death was accompanied by inhibition of caspase activation and DNA fragmentation. Overexpression of AtILP also attenuated effector protein-induced cell death and increased the growth of an avirulent bacterial pathogen. The current results demonstrated the existence of a novel plant IAP-like protein that prevents caspase activation in Arabidopsis and showed that a plant anti-apoptosis gene functions similarly in plant and animal systems.
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- 2011
4. Stress-driven structural and functional switching of Ypt1p from a GTPase to a molecular chaperone mediates thermo tolerance in Saccharomyces cerevisiae.
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Chang Ho Kang, Sun Yong Lee, Joung Hun Park, Yuno Lee, Hyun Suk Jung, Yong Hun Chi, Young Jun Jung, Ho Byoung Chae, Mi Rim Shin, Woe Yeon Kim, Dae-Jin Yun, and Sang Yeol Lee
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GUANOSINE triphosphatase ,MOLECULAR chaperones ,PHYSIOLOGICAL stress ,G proteins ,THERMAL tolerance (Physiology) ,GEL permeation chromatography ,IMMUNOBLOTTING ,SACCHAROMYCES cerevisiae - Abstract
Guanosine triphosphatases (GTPases) function as molecular switches in signal transduction pathways that enable cells to respond to extracellular stimuli. Saccharomyces cerevisiae yeast protein two 1 protein (Ypt1p) is a monomeric small GTPase that is essential for endoplasmic reticulum-to-Golgi trafficking. By size-exclusion chromatography, SDS-PAGE, and native PAGE, followed by immunoblot analysis with an anti-Ypt1p antibody, we found that Ypt1p structurally changed from low-molecular-weight (LMW) forms to high-molecular-weight (HMW) complexes after heat shock. Based on our results, Ypt1p exhibited dual functions both as a GTPase and a molecular chaperone, and furthermore, heat shock induced a functional switch from that of a GTPase to a molecular chaperone driven by the structural change from LMW to HMW forms. Subsequently, we found, by using a galactose-inducible expression system, that conditional overexpression of YPT1 in yeast cells enhanced the thermotolerance of cells by increasing the survival rate at 55°C by ~60%, compared with the control cells expressing YPT1 in the wild-type level. Altogether, our results suggest that Ypt1p is involved in the cellular protection process under heat stress conditions. Also, these findings provide new insight into the in vivo roles of small GTP-binding proteins and have an impact on research and the investigation of human diseases. [ABSTRACT FROM AUTHOR]
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- 2015
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5. Analysis of Arabidopsis thioredoxin-h isotypes identifies discrete domains that confer specific structural and functional properties.
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Young Jun JUNG, Yong Hun CHI, Ho Byoung CHAE, Mi Rim SHIN, Eun Seon LEE, Joon-Yung CHA, Seol Ki PAENG, Yuno LEE, Jin Ho PARK, Woe Yeon KIM, Chang Ho KANG, Kyun Oh LEE, Keun Woo LEE, Dae-Jin YUN, and Sang Yeol LEE
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ARABIDOPSIS thaliana ,THIOREDOXIN ,DISULFIDES ,MOLECULAR chaperones ,PROTEIN structure ,MUTAGENESIS - Abstract
Multiple isoforms of Arabidopsis thaliana h-type thioredoxins (AtTrx-hs) have distinct structural and functional specificities. AtTrx-h3 acts as both a disulfide reductase and as a molecular chaperone. We prepared five representative AtTrx-hs and compared their protein structures and disulfide reductase and molecular chaperone activities. AtTrx-h2 with an N-terminal extension exhibited distinct functional properties with respect to other AtTrx-hs. AtTrx-h2 formed low-molecular-mass structures and exhibited only disulfide reductase activity, whereas the other AtTrx-h isoforms formed high-molecular-mass complexes and displayed both disulfide reductase and molecular chaperone activities. The domains that determine the unique structural and functional properties of each AtTrx-hs protein were determined by constructing a domain-swap between the N- and C-terminal regions of AtTrx-h2 and AtTrx-h3 (designated AtTrx-h-2N3C and AtTrx-h-3N2C respectively), an N-terminal deletion mutant of AtTrx-h2 [AtTrx-h2-N(Δ19)] and site-directed mutagenesis of AtTrx-h3. AtTrx-h2-N(Δ19) and AtTrx-h-3N2C exhibited similar properties to those of AtTrx-h2, but AtTrx-h-2N3C behaved more like AtTrx-h3, suggesting that the structural and functional specificities of AtTrx-hs are determined by their C-terminal regions. Hydrophobicity profiling and molecular modelling revealed that Ala
100 and Ala106 in AtTrx-h3 play critical roles in its structural and functional regulation. When these two residues in AtTrx-h3 were replaced with lysine, AtTrx-h3 functioned like AtTrx-h2. The chaperone function of AtTrx-hs conferred enhanced heat-shock-resistance on a thermosensitive trx1/2-null yeast mutant. [ABSTRACT FROM AUTHOR]- Published
- 2013
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6. Heat-induced chaperone activity of serine/threonine protein phosphatase 5 enhances thermotolerance in Arabidopsis thaliana.
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Jin Ho Park, Sun Yong Lee, Woe Yeon Kim, Young Jun Jung, Ho Byoung Chae, Hyun Suk Jung, Chang Ho Kang, Mi Rim Shin, Sun Young Kim, Su'udi, Mukhamad, Dae Jin Yun, Kyun Oh Lee, Min Gab Kim, and Sang Yeol Lee
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ARABIDOPSIS thaliana ,MOLECULAR chaperones ,SERINE proteinases ,PHOSPHATASES ,PHYSIOLOGICAL stress - Abstract
Summary [ABSTRACT FROM AUTHOR]
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- 2011
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7. Heat-Shock and Redox-Dependent Functional Switching of an h-Type Arabidopsis Thioredoxin from a Disulfide Reductase to a Molecular Chaperone.
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Soo Kwon Park, Young Jun Jung, Jung Ro Lee, Young Mee Lee, Ho Hee Jang, Seung Sik Lee, Jin Ho Park, Sun Young Kim, Jeong Chan Moon, Sun Yong Lee, Ho Byoung Chae, Mi Rim Shin, Ji Hyun Jung, Min Gab Kim, Woe Yeon Kim, Dae-Jin Yun, Kyun Oh Lee, and Sang Yeol Lee
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THIOREDOXIN ,ARABIDOPSIS thaliana ,OLIGOMERS ,HEAT shock proteins ,MOLECULAR chaperones ,RECOMBINANT proteins - Abstract
A large number of thioredoxins (Trxs), small redox proteins, have been identified from all living organisms. However, many of the physiological roles played by these proteins remain to be elucidated. We isolated a high M
r (HMW) form of h-type Trx from the heat-treated cytosolic extracts of Arabidopsis (Arabidopsis thaliana) suspension cells and designated it as AtTrx-h3. Using bacterially expressed recombinant AtTrx-h3, we find that it forms various protein structures ranging from low and oligomeric protein species to HMW complexes. And the AtTrx-h3 performs dual functions, acting as a disulfide reductase and as a molecular chaperone, which are closely associated with its molecular structures. The disulfide reductase function is observed predominantly in the low Mr forms, whereas the chaperone function predominates in the HMW complexes. The multimeric structures of AtTrx-h3 are regulated not only by heat shock but also by redox status. Two active cysteine residues in AtTrx-h3 are required for disulfide reductase activity, but not for chaperone function. AtTrx-h3 confers enhanced heat-shock tolerance in Arabidopsis, primarily through its chaperone function. [ABSTRACT FROM AUTHOR]- Published
- 2009
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8. Heat-shock dependent oligomeric status alters the function of a plant-specific thioredoxin-like protein, AtTDX.
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Jung Ro Lee, Seung Sik Lee, Ho Hee Jang, Young Mee Lee, Jin Ho Park, Seong-Cheol Park, Jeong Chan Moon, Soo Kwon Park, Sun Young Kim, Sun Yong Lee, Ho Byoung Chae, Young Jun Jung, Woe Yeon Kim, Mi Rim Shin, Gang-Won Cheong, Min Gab Kim, Kee Ryeon Kang, Kyun Oh Lee, Dae-Jin Yun, and Sang Yeol Lee
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HEAT shock proteins ,ARABIDOPSIS ,OLIGOMERS ,LINEAR algebra ,MOLECULAR weights - Abstract
We found that Arabidopsis AtTDX, a heat-stable and plant-specific thioredoxin (Trx)-like protein, exhibits multiple functions, acting as a disulfide reductase, foldase chaperone, and holdase chaperone. The activity of AtTDX, which contains 3 tetratricopeptide repeat (TPR) domains and a Trx motif, depends on its oligomeric status. The disulfide reductase and foldase chaperone functions predominate when AtTDX occurs in the low molecular weight (LMW) form, whereas the holdase chaperone function predominates in the high molecular weight (HMW) complexes. Because deletion of the TPR domains results in a significant enhancement of AtTDX disulfide reductase activity and complete loss of the holdase chaperone function, our data suggest that the TPR domains of AtTDX block the active site of Trx and play a critical role in promoting the holdase chaperone function. The oligomerization status of AtTDX is reversibly regulated by heat shock, which causes a transition from LMW to HMW complexes with concomitant functional switching from a disulfide reductase and foldase chaperone to a holdase chaperone. Overexpression of AtTDX in Arabidopsis conferred enhanced heat shock resistance to plants, primarily via its holdase chaperone activity. [ABSTRACT FROM AUTHOR]
- Published
- 2009
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