17 results on '"Roch, Fernando"'
Search Results
2. Diverse Cis-Regulatory Mechanisms Contribute to Expression Evolution of Tandem Gene Duplicates
- Author
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Baudouin-Gonzalez, Luís, Santos, Marília A, Tempesta, Camille, Sucena, Élio, Roch, Fernando, and Tanaka, Kohtaro
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- 2017
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3. Multispecies Analysis of Expression Pattern Diversification in the Recently Expanded Insect Ly6 Gene Family
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Tanaka, Kohtaro, Diekmann, Yoan, Hazbun, Alexis, Hijazi, Assia, Vreede, Barbara, Roch, Fernando, and Sucena, Élio
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- 2015
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4. Echinoderms : Focus on the Sea Urchin Model in Cellular and Developmental Biology
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Pontheaux, Florian, Roch, Fernando, Morales, Julia, Cormier, Patrick, Sorbonne Université (SU), Laboratoire de Biologie Intégrative des Modèles Marins (LBI2M), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Boutet, A. & B. Schierwater, and eds
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Cell biology ,Sea urchin ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,Developmental biology ,Model systems ,Marine organisms ,Experimental biology - Abstract
International audience; Echinoderms, a sister group of chordates, is a group of exclusively marine animals. TheEchinodermata is an ancient phylum dating to at least 450 million years old and includingmore than 10,000 extant species present throughout the world’s oceans. The modernechinoderms belong to five classes: Echinoidea (e.g., sea urchins and sand dollars),Asteroidea (e.g., starfishes), Ophiuroidea (e.g., brittle stars), Holothuroidea (e.g., seacucumbers) and Crinoidea (e.g., sea lilies and feather stars).Sea urchin represents a well-established marine model in biological sciences. This chapterprovides a general description of echinoderms and focuses on the significant advances in celland developmental biology that the study of sea urchins has made possible. During the lastdecade, many genomic data concerning echinoderms and sea urchins in particular havebecome available. These new molecular tools have facilitated gene regulation analysis duringdevelopment and have boosted the possibilities offered by sea urchins as experimentalmodels.
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- 2021
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5. eIF4B mRNA Translation Contributes to Cleavage Dynamics in Early Sea Urchin Embryos.
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Pontheaux, Florian, Boulben, Sandrine, Chassé, Héloïse, Boutet, Agnès, Roch, Fernando, Morales, Julia, and Cormier, Patrick
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GENETIC translation ,SEA urchins ,CELL cycle regulation ,NOBEL Prize in Physiology or Medicine ,CELL division ,PARACENTROTUS lividus - Abstract
Simple Summary: Cell division, also known as mitosis, relies on a complex cascade of molecular events that orchestrates the whole process and decides when cells can start dividing. A key factor in this process is protein synthesis, which is carefully regulated inside the cell to assure the timely production of all the proteins required for mitosis. The embryos of sea urchins divide rapidly after fertilization and represent an informative model to analyze the role of protein synthesis regulation during cell cycle progression. For example, the analysis in the 1980s of sea urchin embryos fostered the discovery of Cyclin B, the first representative of a family of proteins that plays a universal role in controlling cell division. This finding was awarded in 2001 with the Nobel Prize in Physiology and Medicine. However, much remains to be learned, and how protein synthesis controls the time and speed of mitosis in a developing embryo is still unclear. For instance, discovering whether the translation of other mRNAs than mitotic cyclins is required to finely regulate the rate of embryonic cleavage has never been tested. In this work, we investigated the role of the translation of an mRNA encoding a protein called eIF4B in the dynamics of embryonic cell division. We showed that newly synthesized eIF4B directly impacts cell division rates in two sea urchin species. Cell divisions are delayed when the production of eIF4B is inhibited in a fertilized egg. Conversely, increased production of eIF4B accelerates mitosis. Therefore, eIF4B mRNA translation represents a new means to regulate the pace of embryonic cleavages. Moreover, since eIF4B is a translational regulator, our findings suggest that the function of its mRNA translation is boosting the production of other proteins essential for mitosis. The cells of the sea urchin embryos seem thus equipped with a controlling device capable of modulating cell division rates, a molecular switch that could contribute to coordinating the first steps of development in other animals as well. During the first steps of sea urchin development, fertilization elicits a marked increase in protein synthesis essential for subsequent cell divisions. While the translation of mitotic cyclin mRNAs is crucial, we hypothesized that additional mRNAs must be translated to finely regulate the onset into mitosis. One of the maternal mRNAs recruited onto active polysomes at this stage codes for the initiation factor eIF4B. Here, we show that the sea urchin eIF4B orthologs present the four specific domains essential for eIF4B function and that Paracentrotus lividus eIF4B copurifies with eIF4E in a heterologous system. In addition, we investigated the role of eIF4B mRNA de novo translation during the two first embryonic divisions of two species, P. lividus and Sphaerechinus granularis. Our results show that injection of a morpholino directed against eIF4B mRNA results in a downregulation of translational activity and delays cell division in these two echinoids. Conversely, injection of an mRNA encoding for P. lividus eIF4B stimulates translation and significantly accelerates cleavage rates. Taken together, our findings suggest that eIF4B mRNA de novo translation participates in a conserved regulatory loop that contributes to orchestrating protein synthesis and modulates cell division rhythm during early sea urchin development. [ABSTRACT FROM AUTHOR]
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- 2022
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6. The genome of Tetranychus urticae reveals herbivorous pest adaptations
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Grbić, Miodrag, Van Leeuwen, Thomas, Clark, Richard M., Rombauts, Stephane, Rouzé, Pierre, Grbić, Vojislava, Osborne, Edward J., Dermauw, Wannes, Thi Ngoc, Phuong Cao, Ortego, Félix, Hernández-Crespo, Pedro, Diaz, Isabel, Martinez, Manuel, Navajas, Maria, Sucena, Élio, Magalhães, Sara, Nagy, Lisa, Pace, Ryan M., Djuranović, Sergej, Smagghe, Guy, Iga, Masatoshi, Christiaens, Olivier, Veenstra, Jan A., Ewer, John, Villalobos, Rodrigo Mancilla, Hutter, Jeffrey L., Hudson, Stephen D., Velez, Marisela, Yi, Soojin V., Zeng, Jia, Pires-daSilva, Andre, Roch, Fernando, Cazaux, Marc, Navarro, Marie, Zhurov, Vladimir, Acevedo, Gustavo, Bjelica, Anica, Fawcett, Jeffrey A., Bonnet, Eric, Martens, Cindy, Baele, Guy, Wissler, Lothar, Sanchez-Rodriguez, Aminael, Tirry, Luc, Blais, Catherine, Demeestere, Kristof, Henz, Stefan R., Gregory, Ryan T., Mathieu, Johannes, Verdon, Lou, Farinelli, Laurent, Schmutz, Jeremy, Lindquist, Erika, Feyereisen, René, and Van de Peer, Yves
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- 2011
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7. Boudin trafficking reveals the dynamic internalisation of specific septate junction components in Drosophila
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Tempesta, Camille, Hijazi, Assia, Moussian, Bernard, and Roch, Fernando
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Embryology ,Arthropoda ,Cell Membranes ,lcsh:Medicine ,Immunostaining ,Endosomes ,Research and Analysis Methods ,Model Organisms ,Medicine and Health Sciences ,Morphogenesis ,Animals ,Drosophila Proteins ,Vesicles ,lcsh:Science ,Skin ,Staining ,Drosophila Melanogaster ,lcsh:R ,Embryos ,Cell Membrane ,Organisms ,Biology and Life Sciences ,Eukaryota ,Membrane Proteins ,Cell Biology ,Animal Models ,Adherens Junctions ,Invertebrates ,Endocytosis ,Insects ,Protein Transport ,Experimental Organism Systems ,Specimen Preparation and Treatment ,lcsh:Q ,Drosophila ,Cellular Structures and Organelles ,Anatomy ,Integumentary System ,Epidermis ,Research Article ,Developmental Biology - Abstract
The maintenance of paracellular barriers in invertebrate epithelia depends on the integrity of specific cell adhesion structures known as septate junctions (SJ). Multiple studies in Drosophila have revealed that these junctions have a stereotyped architecture resulting from the association in the lateral membrane of a large number of components. However, little is known about the dynamic organisation adopted by these multi-protein complexes in living tissues. We have used live imaging techniques to show that the Ly6 protein Boudin is a component of these adhesion junctions and can diffuse systemically to associate with the SJ of distant cells. We also observe that this protein and the claudin Kune-kune are endocytosed in epidermal cells during embryogenesis. Our data reveal that the SJ contain a set of components exhibiting a high membrane turnover, a feature that could contribute in a tissue-specific manner to the morphogenetic plasticity of these adhesion structures.
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- 2017
8. Chapter 2 - Modeling Cancers in Drosophila
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Polesello, Cédric, Roch, Fernando, Gobert, Vanessa, Haenlin, Marc, and Waltzer, Lucas
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- 2011
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9. The Ly6 Protein Coiled Is Required for Septate Junction and Blood Brain Barrier Organisation in Drosophila.
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Hijazi, Assia, Haenlin, Marc, Waltzer, Lucas, and Roch, Fernando
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DROSOPHILA ,PROTEINS ,VERTEBRATES ,LIGANDS (Biochemistry) ,COLD (Temperature) - Abstract
Background: Genetic analysis of the Drosophila septate junctions has greatly contributed to our understanding of the mechanisms controlling the assembly of these adhesion structures, which bear strong similarities with the vertebrate tight junctions and the paranodal septate junctions. These adhesion complexes share conserved molecular components and have a common function: the formation of paracellular barriers restraining the diffusion of solutes through epithelial and glial envelopes. Methodology/Principal Findings: In this work we characterise the function of the Drosophila cold gene, that codes for a protein belonging to the Ly6 superfamily of extracellular ligands. Analysis of cold mutants shows that this gene is specifically required for the organisation of the septate junctions in epithelial tissues and in the nervous system, where its contribution is essential for the maintenance of the blood-brain barrier. We show that cold acts in a cell autonomous way, and we present evidence indicating that this protein could act as a septate junction component. Conclusion/Significance: We discuss the specific roles of cold and three other Drosophila members of the Ly6 superfamily that have been shown to participate in a non-redundant way in the process of septate junction assembly. We propose that vertebrate Ly6 proteins could fulfill analogous roles in tight junctions and/or paranodal septate junctions. [ABSTRACT FROM AUTHOR]
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- 2011
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10. An in vivo RNA interference screen identifies gene networks controlling Drosophila melanogaster blood cell homeostasis.
- Author
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Avet-Rochex, Amélie, Boyer, Karène, Polesello, Cédric, Gobert, Vanessa, Osman, Dani, Roch, Fernando, Augé, Benoit, Zanet, Jennifer, Haenlin, Marc, and Waltzer, Lucas
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DROSOPHILA melanogaster ,GENES ,HOMEOSTASIS ,GENETICS ,EMBRYOLOGY - Abstract
Background: In metazoans, the hematopoietic system plays a key role both in normal development and in defense of the organism. In Drosophila, the cellular immune response involves three types of blood cells: plasmatocytes, crystal cells and lamellocytes. This last cell type is barely present in healthy larvae, but its production is strongly induced upon wasp parasitization or in mutant contexts affecting larval blood cell homeostasis. Notably, several zygotic mutations leading to melanotic mass (or "tumor") formation in larvae have been associated to the deregulated differentiation of lamellocytes. To gain further insights into the gene regulatory network and the mechanisms controlling larval blood cell homeostasis, we conducted a tissue-specific loss of function screen using hemocyte-specific Gal4 drivers and UAS-dsRNA transgenic lines. Results: By targeting around 10% of the Drosophila genes, this in vivo RNA interference screen allowed us to recover 59 melanotic tumor suppressor genes. In line with previous studies, we show that melanotic tumor formation is associated with the precocious differentiation of stem-cell like blood progenitors in the larval hematopoietic organ (the lymph gland) and the spurious differentiation of lamellocytes. We also find that melanotic tumor formation can be elicited by defects either in the fat body, the embryo-derived hemocytes or the lymph gland. In addition, we provide a definitive confirmation that lymph gland is not the only source of lamellocytes as embryo-derived plasmatocytes can differentiate into lamellocytes either upon wasp infection or upon loss of function of the Friend of GATA cofactor U-shaped. Conclusions: In this study, we identify 55 genes whose function had not been linked to blood cell development or function before in Drosophila. Moreover our analyses reveal an unanticipated plasticity of embryo-derived plasmatocytes, thereby shedding new light on blood cell lineage relationship, and pinpoint the Friend of GATA transcription cofactor U-shaped as a key regulator of the plasmatocyte to lamellocyte transformation. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
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11. Shavenbaby Couples Patterning to Epidermal Cell Shape Control.
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Chanut-Delalande, Hélène, Fernandes, Isabelle, Roch, Fernando, Payre, François, and Plaza, Serge
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MORPHOGENESIS ,EMBRYOLOGY ,DROSOPHILA ,FRUIT flies ,TRANSCRIPTION factors ,BIOLOGICAL evolution - Abstract
It is well established that developmental programs act during embryogenesis to determine animal morphogenesis. How these developmental cues produce specific cell shape during morphogenesis, however, has remained elusive. We addressed this question by studying the morphological differentiation of the Drosophila epidermis, governed by a well-known circuit of regulators leading to a stereotyped pattern of smooth cells and cells forming actin-rich extensions (trichomes). It was shown that the transcription factor Shavenbaby plays a pivotal role in the formation of trichomes and underlies all examined cases of the evolutionary diversification of their pattern. To gain insight into the mechanisms of morphological differentiation, we sought to identify shavenbaby's downstream targets. We show here that Shavenbaby controls epidermal cell shape, through the transcriptional activation of different classes of cellular effectors, directly contributing to the organization of actin filaments, regulation of the extracellular matrix, and modification of the cuticle. Individual inactivation of shavenbaby's targets produces distinct trichome defects and only their simultaneous inactivation prevent trichome formation. Our data show that shavenbaby governs an evolutionarily conserved developmental module consisting of a set of genes collectively responsible for trichome formation, shedding new light on molecular mechanisms acting during morphogenesis and the way they can influence evolution of animal forms. [ABSTRACT FROM AUTHOR]
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- 2006
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12. Drosophila miniature dusky encode ZP proteins required for cytoskeletal reorganisation during wing morphogenesis.
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Roch, Fernando, Alonso, Claudio R., and Akam, Michael
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DROSOPHILA genetics , *BIOLOGICAL membranes , *ZONA pellucida , *PROTEINS , *CUTICLE - Abstract
Examines the function of two Drosophila genes, miniature and dusky, that are required for the morphological reorganization of the apical membrane during wing epidermis differentiation. Expression of miniature and dusky in tissues secreting a cuticle; Localization of the Min protein to the apical membrane during the early stages of cuticle formation; Involvement of zona pellucida in the interactions between the apical membrane.
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- 2003
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13. A Peak of H3T3 Phosphorylation Occurs in Synchrony with Mitosis in Sea Urchin Early Embryos.
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Feizbakhsh, Omid, Pontheaux, Florian, Glippa, Virginie, Morales, Julia, Ruchaud, Sandrine, Cormier, Patrick, and Roch, Fernando
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SEA urchins ,EMBRYOS ,CELL division ,POST-translational modification ,SYNCHRONIC order ,MITOSIS ,PHOSPHORYLATION - Abstract
The sea urchin embryo provides a valuable system to analyse the molecular mechanisms orchestrating cell cycle progression and mitosis in a developmental context. However, although it is known that the regulation of histone activity by post-translational modification plays an important role during cell division, the dynamics and the impact of these modifications have not been characterised in detail in a developing embryo. Using different immuno-detection techniques, we show that the levels of Histone 3 phosphorylation at Threonine 3 oscillate in synchrony with mitosis in Sphaerechinus granularis early embryos. We present, in addition, the results of a pharmacological study aimed at analysing the role of this key histone post-translational modification during sea urchin early development. [ABSTRACT FROM AUTHOR]
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- 2020
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14. A Temporal Switch in DER Signaling Controls the Specification and Differentiation of Veins and Interveins in the Drosophila Wing
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Martin-Blanco, Enrique, Roch, Fernando, Noll, Elizabeth, Baonza, Antonio, Duffy, Joseph B., and Perrimon, Norbert
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The Drosophila EGF receptor (DER) is required for the specification of diverse cell fates throughout development. We have examined how the activation of DER controls the development of vein and intervein cells in the Drosophila wing. The data presented here indicate that two distinct events are involved in the determination and differentiation of wing cells. (1) The establishment of a positive feedback amplification loop, which drives DER signaling in larval stages. At this time, rhomboid (rho), in combination with vein, initiates and amplifies the activity of DER in vein cells. (2) The late downregulation of DER activity. At this point, the inactivation of MAPK in vein cells is necessary for the maintenance of the expression of decapentaplegic (dpp) and becomes essential for vein differentiation. Together, these temporal and spatial changes in the activity of DER constitute an autoregulatory network that controls the definition of vein and intervein cell types., Version of Record
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- 1999
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15. boudin is required for septate junction organisation in Drosophila and codes for a diffusible protein of the Ly6 superfamily.
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Hijazi, Assia, Masson, Wilfried, Augé, Benoit, Waltzer, Lucas, Haenlin, Marc, and Roch, Fernando
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CELL membranes ,LIGANDS (Biochemistry) ,DROSOPHILA ,MEMBRANE proteins ,CENTRAL nervous system ,EXTRACELLULAR matrix proteins - Abstract
The Ly6 superfamily, present in most metazoan genomes, codes for different cell-surface proteins and secreted ligands containing an extracellular motif called a Ly6 domain or three-finger domain. We report the identification of 36 novel genes coding for proteins of this family in Drosophila. One of these fly Ly6 proteins, coded by the gene boudin (bou), is essential for tracheal morphogenesis in the fly embryo and contributes to the maintenance of the paracellular barrier and the organisation of the septate junctions in this tissue. Bou, a glycosylphosphatidylinositol anchored membrane protein, is also required for septate junction organisation in epithelial tissues and in the chordotonal organ glial cells, but not in the central nervous system. Our study reveals interesting parallelisms between the Ly6 proteins of flies and vertebrates, such as the CD59 antigen. Similarly to this human protein, Bou travels from cell to cell associated with extracellular particles and, consistently, we show that it is required in a non-cell-autonomous fashion. Our work opens the way for future studies addressing the function of Ly6 proteins using Drosophila as a model system. [ABSTRACT FROM AUTHOR]
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- 2009
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16. Differential roles of PtdIns(4,5)P2 and phosphorylation in moesin activation during Drosophila development.
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Roch F, Polesello C, Roubinet C, Martin M, Roy C, Valenti P, Carreno S, Mangeat P, and Payre F
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- Amino Acid Sequence, Animals, Cell Membrane chemistry, Cell Membrane genetics, Cell Membrane metabolism, Cytoskeletal Proteins genetics, Cytoskeletal Proteins metabolism, Drosophila chemistry, Drosophila genetics, Drosophila metabolism, Drosophila Proteins genetics, Membrane Proteins genetics, Membrane Proteins metabolism, Microfilament Proteins chemistry, Microfilament Proteins genetics, Molecular Sequence Data, Phosphorylation, Protein Binding, Protein Transport, Sequence Alignment, Wings, Animal chemistry, Wings, Animal growth & development, Wings, Animal metabolism, Drosophila growth & development, Drosophila Proteins metabolism, Microfilament Proteins metabolism, Phosphatidylinositol 4,5-Diphosphate metabolism
- Abstract
The ezrin, radixin and moesin (ERM) proteins regulate cell membrane architecture in several cellular contexts. Current models propose that ERM activation requires a PtdIns(4,5)P(2)-induced conformational change, followed by phosphorylation of a conserved threonine. However, how these inputs contribute in vivo to orchestrate ERM activation is poorly understood. We addressed this issue by evaluating the contribution of PtdIns(4,5)P(2) and phosphorylation to the regulation of moesin during Drosophila development. Unexpectedly, we found that a form of moesin that cannot be phosphorylated displayed significant activity and could substitute for the endogenous product during wing morphogenesis. By contrast, we also show that PtdIns(4,5)P(2) binding is essential for moesin recruitment to the membrane and for its subsequent phosphorylation. Our data indicate that PtdIns(4,5)P(2) acts as a dosing mechanism that locally regulates ERM membrane recruitment and activation, whereas cycles of phosphorylation and dephosphorylation further control their activity once they have reached the cell cortex.
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- 2010
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17. EGFR signalling inhibits Capicua-dependent repression during specification of Drosophila wing veins.
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Roch F, Jiménez G, and Casanova J
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- Animals, Drosophila genetics, Drosophila growth & development, Drosophila metabolism, Genes, Insect, HMGB Proteins, High Mobility Group Proteins genetics, Proto-Oncogene Proteins c-raf metabolism, RNA Processing, Post-Transcriptional, Repressor Proteins genetics, Transcription Factors genetics, Wings, Animal growth & development, ras Proteins metabolism, Drosophila Proteins, ErbB Receptors metabolism, High Mobility Group Proteins metabolism, Repressor Proteins metabolism, Signal Transduction
- Abstract
Localised activation of the Ras/Raf pathway by Epidermal Growth Factor Receptor (EGFR) signalling specifies the formation of veins in the Drosophila wing. However, little is known about how the EGFR signal regulates transcriptional responses during the vein/intervein cell fate decision. We provide evidence that EGFR signalling induces expression of vein-specific genes by inhibiting the Capicua (Cic) HMG-box repressor, a known regulator of embryonic body patterning. Lack of Cic function causes ectopic expression of EGFR targets such as argos, ventral veinless and decapentaplegic and leads to formation of extra vein tissue. In vein cells, EGFR signalling downregulates Cic protein levels in the nucleus and relieves repression of vein-specific genes, whereas intervein cells maintain high levels of Cic throughout larval and pupal development, repressing the expression of vein-specific genes and allowing intervein differentiation. However, regulation of some EGFR targets such as rhomboid appears not to be under direct control of Cic, suggesting that EGFR signalling branches out in the nucleus and controls different targets via distinct mediator factors. Our results support the idea that localised inactivation of transcriptional repressors such as Cic is a rather general mechanism for regulation of target gene expression by the Ras/Raf pathway.
- Published
- 2002
- Full Text
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