13 results on '"Rocher, Aline"'
Search Results
2. Plant trait relationships are maintained within a major crop species: lack of artificial selection signal and potential for improved agronomic performance.
- Author
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Lemoine, Taïna, Violle, Cyrille, Montazeaud, Germain, Isaac, Marney E., Rocher, Aline, Fréville, Hélène, and Fort, Florian
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SELECTION (Plant breeding) ,EMMER wheat ,DURUM wheat ,CROPS ,PLANT maintenance ,SPECIES - Abstract
Summary: The exploration of phenotypic spaces of large sets of plant species has considerably increased our understanding of diversification processes in the plant kingdom. Nevertheless, such advances have predominantly relied on interspecific comparisons that hold several limitations.Here, we grew in the field a unique set of 179 inbred lines of durum wheat, Triticum turgidum spp. durum, characterized by variable degrees of artificial selection. We measured aboveground and belowground traits as well as agronomic traits to explore the functional and agronomic trait spaces and to investigate trait‐to‐agronomic performance relationships.We showed that the wheat functional trait space shared commonalities with global cross‐species spaces previously described, with two main axes of variation: a root foraging axis and a slow–fast trade‐off axis. Moreover, we detected a clear signature of artificial selection on the variation of agronomic traits, unlike functional traits. Interestingly, we identified alternative phenotypic combinations that can optimize crop performance.Our work brings insightful knowledge about the structure of phenotypic spaces of domesticated plants and the maintenance of phenotypic trade‐offs in response to artificial selection, with implications for trade‐off‐free and multi‐criteria selection in plant breeding. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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3. Diversity matters in wheat mixtures: A genomic survey of the impact of genetic diversity on the performance of 12 way durum wheat mixtures grown in two contrasted and controlled environments.
- Author
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Alsabbagh, Pauline, Gay, Laurène, Colombo, Michel, Montazeaud, Germain, Ardisson, Morgane, Rocher, Aline, Allard, Vincent, and David, Jacques L.
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GENETIC variation ,WHEAT farming ,DURUM wheat ,WHEAT ,BIOTIC communities ,EMMER wheat ,BIOLOGICAL fitness - Abstract
In ecology, an increase in genetic diversity within a community in natural ecosystems increases its productivity, while in evolutionary biology, kinship selection predicts that relatedness on social traits improves fitness. Varietal mixtures, where different genotypes are grown together, show contrasting results, especially for grain yield where both positive and negative effects of mixtures have been reported. To understand the effect of diversity on field performance, we grew 96 independent mixtures each composed with 12 durum wheat (Triticum turgidum ssp. durum Thell.) inbred lines, under two contrasting environmental conditions for water availability. Using dense genotyping, we imputed allelic frequencies and a genetic diversity index on more than 96000 loci for each mixture. We then analyzed the effect of genetic diversity on agronomic performance using a genome-wide approach. We explored the stress gradient hypothesis, which proposes that the greater the unfavourable conditions, the more beneficial the effect of diversity on mixture performance. We found that diversity on average had a negative effect on yield and its components while it was beneficial on grain weight. There was little support for the stress gradient theory. We discuss how to use genomic data to improve the assembly of varietal mixtures. [ABSTRACT FROM AUTHOR]
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- 2022
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4. From cultivar mixtures to allelic mixtures: opposite effects of allelic richness between genotypes and genotype richness in wheat.
- Author
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Montazeaud, Germain, Flutre, Timothée, Ballini, Elsa, Morel, Jean‐Benoit, David, Jacques, Girodolle, Johanna, Rocher, Aline, Ducasse, Aurélie, Violle, Cyrille, Fort, Florian, and Fréville, Hélène
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DURUM wheat ,GENOTYPES ,SINGLE nucleotide polymorphisms ,CROP diversification ,GENETIC variation ,GRAIN yields ,ECOSYSTEMS - Abstract
Summary: Agroecosystem diversification through increased crop genetic diversity could provide multiple services such as improved disease control or increased productivity. However, we still poorly understand how genetic diversity affects agronomic performance.We grew 179 inbred lines of durum wheat in pure stands and in 202 binary mixtures in field conditions. We then tested the effect of allelic richness between genotypes and genotype richness on grain yield and Septoria tritici blotch disease. Allelic richness was tested at 19K single nucleotide polymorphisms distributed along the durum wheat genome. Both genotype richness and allelic richness could be equal to 1 or 2.Mixtures were overall more productive and less diseased than their pure stand components. Yet, we identified one locus at which allelic richness between genotypes was associated with increased disease severity and decreased grain yield. The effect of allelic richness at this locus was stronger than the effect of genotype richness on grain yield (−7.6% vs +5.7%).Our results suggest that positive effects of crop diversity can be reversed by unfavourable allelic associations. This highlights the need to integrate genomic data into crop diversification strategies. More generally, investigating plant–plant interactions at the genomic level is promising to better understand biodiversity–ecosystem functioning relationships. [ABSTRACT FROM AUTHOR]
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- 2022
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5. Genetic architecture of semolina yield and of its components in durum wheat (Triticum turgidum spp. durum)
- Author
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TAVAUD-PIRRA, Muriel, Ardisson, Morgane, Compan, Frederic, David, Jacques, Rocher, Aline, Sanchez, Dimitri, Roumet, Pierre, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
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Vegetal Biology ,sélection génétique ,architecture génétique ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,triticum turgidum durum ,Biologie végétale ,ComputingMilieux_MISCELLANEOUS ,amélioration des plantes - Abstract
International audience
- Published
- 2018
6. Genotype mixtures as a tool to develop sustainable agriculture? Elucidating the mechanisms that drive genotypic interactions in crops
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Fréville, Hélène, Roumet, Pierre, Rode, Nicolas, Muller, Marie-Helene, Rocher, Aline, Latreille, Muriel, David, Jacques, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Centre de Biologie pour la Gestion des Populations (UMR CBGP), and Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
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[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,ComputingMilieux_MISCELLANEOUS - Abstract
National audience
- Published
- 2018
7. Kin recognition in crops as a possible mechanism for explaining lower yield of variety mixtures
- Author
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Fréville, Hélène, Roumet, Pierre, Rode, Nicolas, Rocher, Aline, Latreille, Muriel, Muller, Marie-Helene, David, Jacques, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Centre de Biologie pour la Gestion des Populations (UMR CBGP), and Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
- Subjects
[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,ComputingMilieux_MISCELLANEOUS - Abstract
National audience
- Published
- 2018
8. Multifaceted functional diversity for multifaceted crop yield: Towards ecological assembly rules for varietal mixtures.
- Author
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Montazeaud, Germain, Violle, Cyrille, Roumet, Pierre, Rocher, Aline, Ecarnot, Martin, Compan, Frédéric, Maillet, Guillaume, Fort, Florian, Fréville, Hélène, and Isaac, Marney
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CROP yields ,DURUM wheat ,PLANT diversity ,GRAIN yields ,EMMER wheat ,MIXTURES - Abstract
Ecological theories suggest that higher plant genetic diversity can increase productivity in natural ecosystems. So far, varietal mixtures, that is, the cultivation of different genotypes within a field, have shown contrasting results, notably for grain yield where both positive and negative mixing effects have been reported. Such discrepancy between ecological theories and agronomical applications calls for a better understanding of plant–plant interactions in crops.Using durum wheat Triticum turgidum ssp. durum as a model species, we investigated the effect of functional trait composition on productivity and grain quality of varietal mixtures by growing 179 highly diverse genotypes in pure stands and 197 two‐way mixtures in field conditions. We quantified the agronomic performance of the mixtures relative to their components grown in pure stands on two variables related to productivity, vegetative biomass yield and grain yield, and one variable related to grain quality, grain protein content. We then analysed the relationship between the relative performance of the mixtures and their functional composition that we characterized with trait means and trait differences on 19 above‐ and below‐ground traits.We found that biomass and grain yield increased by 4% overall in mixtures relative to single varieties, but that mixing effects were non‐significant for grain protein content. The combined effects of trait means and trait differences explained 12%, 17% and 22% of the variability of relative grain yield, biomass yield and grain protein content, respectively, with different traits affecting productivity and grain quality. Clustering varieties into functional groups allowed us to identify the most beneficial associations for multifaceted agronomic performance.Synthesis and applications. Functional traits explained a significant part of the relative agronomic performance of mixtures compared to monocultures (12%–22%, depending on the yield component). They can thus serve as a basis to identify groups of varieties whose combinations are expected to generate positive mixing effects, especially for productivity, and without compromising grain quality. Selection could then target convergence between groups for some traits and divergence between groups for other traits using empirically derived relationships between functional traits and agronomic performance as a guideline. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
9. Genotype mixtures as a tool to develop sustainable agriculture: elucidating the mechanisms that drive genotypic interactions in durum wheat
- Author
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Fréville, Hélène, Roumet, Pierre, Rode, Nicolas, Rocher, Aline, Ecarnot, Martin, Compan, Frederic, David, Jacques, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
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Vegetal Biology ,varietal mixtures ,blé dur ,développement agricole durable ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,génotype ,Biologie végétale ,ComputingMilieux_MISCELLANEOUS - Abstract
National audience
- Published
- 2016
10. Genotype mixtures: a tool to develop sustainable agriculture? Mechanisms that drive genotypic interactions in durum wheat
- Author
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Fréville, Hélène, Roumet, Pierre, Rode, Nicolas, Rocher, Aline, Ecarnot, Martin, Compan, Frederic, Muller, Marie-Helene, David, Jacques, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Centre de Biologie pour la Gestion des Populations (UMR CBGP), and Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
- Subjects
[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,ComputingMilieux_MISCELLANEOUS - Abstract
National audience
- Published
- 2016
11. Genetic architecture of kernels quality traits in an evolutionary prebreeding population of durum wheat
- Author
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David, Jacques, Vilmus, Ingrid, Ranwez, Vincent, Roumet, Pierre, Tavaud, Muriel, Compan, Frederic, Rocher, Aline, Ardisson, Morgane, Santoni, Sylvain, Paux, Etienne, Rimbert, Hélène, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Génétique Diversité et Ecophysiologie des Céréales (GDEC), Institut National de la Recherche Agronomique (INRA)-Université Blaise Pascal - Clermont-Ferrand 2 (UBP), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), ProdInra, Migration, and Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Institut National de la Recherche Agronomique (INRA)
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[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,[SDV.BV] Life Sciences [q-bio]/Vegetal Biology - Abstract
Equipe GE2POP; International audience; Recent advances in genotyping and phenotyping technologies can now be applied in durum wheat and permit to adress a genome wide approach to disclose the geneti c architecture of kernel quality traits. DNA chips can allow the genotyping of thousands of SNP markers on several hundreds of lines while NIRS (Near Infra Red spectroscopy) allow the predicti on of relevant traits in durum wheat quality, e.g., protein content, yellow pigment content and semolina yield. Genome Wide Assocati on Studies (GWAS) have proven their potenti al in detecti ng chromosomal areas implied in the variati on of traits. Good panels should have a diversity level, a low structurati on and reduced level of linkage disequilibrium. Assembling panels from lines of diverse origin is usually the rule in many crops but may lead to a substanti al structurati on eff ect and to spurrious associati ons. We propose here to use lines drawn from an original composite cross populati on, originally dedicated to create a pre breeding resource. The Evoluti onary Prebreeding pOpulati on (EPO) is conti nuously grown since 1997 with a light selecti on and a 10% outcrossing rate. We report the fi rst results of a GWAS study on 300 hundred lines drawn from the 2009 harvest of EPO. Using a set of 62 000 polymorphic SNP drawn along the genome, we report the associati ons found between this set of markers and a set of traits related to the kernel quality predicted by NIRS. First, the characteristi cs of the EPO populati on will be illustrated to examine its power to detect associati on. We will report the fi ne geneti c structurati on and the fi ne scale Linkage disequilibrium on the 3B chromosome on which the SNP can be physically located. Then kernels quality traits will be dissected by GWAS to detect the most important chromosomal regions involved in the variati on. Finally, each trait will be predicted as the whole level to discuss the potenti al of Genomic Selecti on (GS) in the improvement of quality in the durum kernel.
- Published
- 2015
12. Preferential helping to relatives: A potential mechanism responsible for lower yield of crop variety mixtures?
- Author
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Fréville, Hélène, Roumet, Pierre, Rode, Nicolas Olivier, Rocher, Aline, Latreille, Muriel, Muller, Marie‐Hélène, and David, Jacques
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CROP yields ,CULTIVARS ,WHEAT ,DURUM wheat ,PLANT competition ,PHENOTYPIC plasticity - Abstract
Variety mixtures, the cultivation of different genotypes within a field, have been proposed as a way to increase within‐crop diversity, allowing the development of more sustainable agricultural systems with reduced environmental costs. Although mixtures have often been shown to over‐yield the average of component varieties in pure stands, decreased yields in mixtures have also been documented. Kin selection may explain such pattern, whenever plants direct helping behaviors preferentially toward relatives and thus experience stronger competition when grown with less related neighbors, lowering seed production of mixtures. Using varieties of durum wheat originating from traditional Moroccan agrosystems, we designed a greenhouse experiment to address whether plants reduced competition for light by limiting stem elongation when growing with kin and whether such phenotypic response resulted in higher yield of kin groups. Seeds were sown in groups of siblings and nonkin, each group containing a focal plant surrounded by four neighbors. At the group level, mean plant height and yield did not depend upon relatedness among competing plants. At the individual level, plant height was not affected by genetic relatedness to neighbors, after accounting for direct genetic effects that might induce among‐genotype differences in the ability to capture resources that do not depend on relatedness. Moreover, in contrast to our predictions, shorter plants had lower inclusive fitness. Phenotypic plasticity in height was very limited in response to neighbor genotypes. This suggests that human selection in crops may have attenuated shade‐avoidance responses to competition for light. Future research on preferential helping to relatives in crops might thus target social traits that drive competition for other resources than light. Overall, our study illustrates the relevance of tackling agricultural issues from an evolutionary standpoint and calls for extending such approaches to a larger set of crop species. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
13. Unravelling the impact of domestication on competitive ability in Durum Wheat: A Phenotypic Plasticity Perspective.
- Author
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Lemoine T, Violle C, Gonzalez EA, Gaubert M, Rocher A, Fréville H, and Fort F
- Abstract
The need to address the impact of domestication on plant traits is frequently highlighted in modern agriculture. It is often argued that domesticated plants have lost competitive ability due to reduced phenotypic plasticity. This study examines whether domestication has affected competitive ability, functional trait values, and plasticity in durum wheat across 39 genotypes representing four key stages of domestication, from wild progenitors to modern elite varieties. Plants were grown in pots, both alone and in competition with a same neighboring genotype. Biomass, and above- and belowground traits were measured at the end of the vegetative stage. Our results show that the three domesticated groups lost less biomass in response to competition compared to their wild progenitors. All genotypes developed thinner leaves and thicker roots when grown with a neighbor. While wild progenitors exhibited the highest plasticity, this did not translate to a greater competitive ability. These findings challenge the theoretical expectation that domesticated plants are less suited for competition. Instead, they suggest that domesticated plants perform well in competitive environments and question the need to reintroduce wild traits to improve competitive ability., (© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
- Published
- 2024
- Full Text
- View/download PDF
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