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The scarcity of long-term observational data has limited the use of statistical or machine-learning techniques for predicting intraannual ecological variation. However, time-stamped citizen-science observation records, supported by media data such as photographs, are increasingly available. In the present article, we present a novel framework based on the concept of relative phenological niche, using machine-learning algorithms to model observation records as a temporal sample of environmental conditions in which the represented ecological phenomenon occurs. Our approach accurately predicts the temporal dynamics of ecological events across large geographical scales and is robust to temporal bias in recording effort. These results highlight the vast potential of citizen-science observation data to predict ecological phenomena across space, including in near real time. The framework is also easily applicable for ecologists and practitioners already using machine-learning and statistics-based predictive approaches. [ABSTRACT FROM AUTHOR]

Quercus faginea (Portuguese oak) is a marcescent White Oak that is distributed across the western Mediterranean Basin in transitional sub-Mediterranean areas that include most of the western Portuguese coast. Due to land-use changes, its presence has been drastically reduced but there are still old-growth oaks, remnants of the native forest, that should be classified as deserving national legal protection for their cultural and aesthetic value as well as for their ecological importance. Much remains to be done in order to identify the trees to be protected and to increase social awareness of the importance of these secular oaks. Hopefully, the implementation of tailored management practices will encourage owners to protect these iconic trees. This work presents some of the oaks in western and central Portugal that have already been classified and others that should be. Our intention is that it serve to promote the future conservation of all old-growth oaks of patrimonial and ecological interest. [ABSTRACT FROM AUTHOR]

Abstract Traditional Ecological Knowledge (TEK) and folklore are repositories of large amounts of information about the natural world. Ideas, perceptions and empirical data held by human communities regarding local species are important sources which enable new scientific discoveries to be made, as well as offering the potential to solve a number of conservation problems. We documented the gecko-related folklore and TEK of the people of southern Portugal, with the particular aim of understanding the main ideas relating to gecko biology and ecology. Our results suggest that local knowledge of gecko ecology and biology is both accurate and relevant. As a result of information provided by local inhabitants, knowledge of the current geographic distribution of Hemidactylus turcicus was expanded, with its presence reported in nine new locations. It was also discovered that locals still have some misconceptions of geckos as poisonous and carriers of dermatological diseases. The presence of these ideas has led the population to a fear of and aversion to geckos, resulting in direct persecution being one of the major conservation problems facing these animals. It is essential, from both a scientific and conservationist perspective, to understand the knowledge and perceptions that people have towards the animals, since, only then, may hitherto unrecognized pertinent information and conservation problems be detected and resolved.

Aim: Fossil pollen is an important tool for understanding biogeographical patterns in the past, but the taxonomic resolution of the fossil‐pollen record may be limited to genus or even family level. Chemical analysis of pollen grains has the potential to increase the taxonomic resolution of pollen analysis, but present‐day chemical variability is poorly understood. This study aims to investigate whether a phylogenetic signal is present in the chemical variations of Quercus L. pollen and to assess the prospects of chemical techniques for identification in biogeographical research. Location: Portugal. Taxon: Six taxa (five species, one subspecies) of Quercus L., Q. faginea, Q. robur, Q. robur ssp. estremadurensis, Q. coccifera, Q. rotundifolia and Q. suber belonging to three sections: Cerris, Ilex and Quercus (Denk, Grimm, Manos, Deng, & Hipp, 2017). Methods: We collected pollen samples from 297 individual Quercus trees across a 4° (~450 km) latitudinal gradient and determined chemical differences using Fourier‐transform infrared spectroscopy (FTIR). We used canonical powered partial least squares regression (CPPLS) and discriminant analysis to describe within‐ and between‐species chemical variability. Results: We find clear differences in the FTIR spectra from Quercus pollen at the section level (Cerris: ~98%; Ilex: ~100%; Quercus: ~97%). Successful discrimination is based on spectral signals related to lipids and sporopollenins. However, discrimination of species within individual Quercus sections is more challenging: overall, species recall is ~76% and species misidentifications within sections lie between 18% and 31% of the test set. Main Conclusions: Our results demonstrate that subgenus level differentiation of Quercus pollen is possible using FTIR methods, with successful classification at the section level. This indicates that operator‐independent FTIR approaches can surpass traditional morphological techniques using light microscopy. Our results have implications both for providing new insights into past colonization pathways of Quercus, and likewise for forecasting future responses to climate change. However, before FTIR techniques can be applied more broadly across palaeoecology and biogeography, our results also highlight a number of research challenges that still need to be addressed, including developing sporopollenin‐specific taxonomic discriminators and determining a more complete understanding of the effects of environmental variation on pollen‐chemical signatures in Quercus. [ABSTRACT FROM AUTHOR]

Mediterranean forests are unique and one of the most threatened biomes worldwide (Klausmeyer and Shaw 2009). They are distributed through marked ecological gradients that are supported by a wide variety of diverse geology and contrasting bioclimatic conditions. Marcescence (i.e., the abscence of leaf fall abscission; Addicott 1982), is a life-history trait related to contrasting or transitional climatic areas such as those across Eurosiberian and Mediterranean Regions (García-Mijangos et al. 2014). Thus, marcescent forests are ecotones located in the transition between temperate areas with cold winters and mild rainy summers and mediterranean regions with dry and hot summers (Rivas-Martínez et al. 2017). We aim to provide a global overview of marcescent forests in the Mediterranean basin, a significant ecotone in terms of biogeography and conservation, by exploring the main ecological drivers that have promoted past, current and future changes in the distribution ranges of several oak species. We used a subset of oak species from the subsection Galliferae (Quercus L.), to unveil biogeographic relationships and recent or past contact between taxa, thus bringing insights to its evolutionary history and speciation. A database was built with records obtained from extensive fieldwork, herbaria review and online resources (e.g., Global Biodiversity Information Facility (GBIF), scrutinized by taxonomic experts. We used downscaled climate data to obtain potential distribution of each species through an ensemble-modelling framework (biomod2 - R package, Araújo and New 2007, Thuiller et al. 2009), across different past (Last Glacial Maximum and Middle Holocene), present and future scenarios (2050 and 2080 Hijmans et al. 2005; Representative Concentration Pathway (RCP) 4.5 IPCC 2013). Results provide new insights to advance our current understanding of the biogeographic trajectories of transiently co-occurring oak species, at the boundary of two major biomes and biogeographic regions in Southern Europe and North Africa. Furthermore, we highlight the importance of these forests for biodiversity conservation, not only as refuge of relict and narrow endemic species, but particularly for understanding white oak biogeography and evolution in Europe, anticipating future shifts driven by anthropogenic climate change. [ABSTRACT FROM AUTHOR]

Simple Summary: The ant-like flies are a group of nine species of flightless Tachydromia, with their distribution restricted to the Iberian Peninsula. Severe knowledge gaps regarding their distribution and ecological requirements hinder conservation assessments. To improve this scenario, an ensemble of 9 different species distribution models was applied to unveil habitat suitability and to provide guidelines for future studies. The most important factors influencing habitat suitability are climate-related, followed by forest type and structure, with well-defined biogeographic gradients. T. lusitanica and T. ebejeri are adapted to the mild temperature and high-humidity environments, typical of the Temperate–Eurosiberian life zone. T. semiaptera and T. iberica are adapted to progressively drier and hotter central and southern parts of the Iberian Peninsula, connected to transitional Temperate–submediterranean areas. Ant-like flies' distribution overlaps with deciduous/ marcescent oak species, which can effectively indicate their presence in Iberia. Additionally, southern marcescent forests emerge as "islands" with particular interest for future fieldwork. Ant-like flies are threatened by several factors such as climate change and habitat destruction, including urbanization and forest fires. This study provides vital tools to better assess the ant-like flies' conservation status and to manage their habitat. Ant-like flies comprise nine Iberian endemic species of flightless Tachydromia. Severe knowledge gaps on distribution and ecological requirements hinder conservation assessments. Species distribution models were applied to unveil habitat suitability and to provide guidelines for future studies. An ensemble modeling approach combining ten different techniques was implemented with the biomod2 package. Occurrence data was partitioned into six sets, including two multi-species groups and four species. The most relevant drivers of habitat suitability are climate-related, followed by forest type and structure, according to well-defined biogeographic gradients. T. lusitanica and T. ebejeri are adapted to mild temperatures and high-humidity environments. Their distribution is connected to the Temperate–Eurosiberian life zone. T. semiaptera and T. iberica are adapted to progressively drier and hotter central and southern parts of the Iberian Peninsula, connected to transitional Temperate–submediterranean areas. Ant-like fly' ranges overlap with deciduous/marcescent oak species, acting as suitable indicators of their presence in Iberia. Southern marcescent forests emerge as "islands" with particular interest for future prospections. Ant-like flies are threatened by several factors such as climate change and habitat destruction, including urbanization and forest fires. This study provides vital tools to better assess the ant-like flies' conservation status and to manage their habitat. [ABSTRACT FROM AUTHOR]

The Iberian Peninsula hosts a high diversity of oak species, being a hot-spot for the conservation of European White Oaks (Quercus) due to their environmental heterogeneity and its critical role as a phylogeographic refugium. Identifying and ranking the drivers that shape the distribution of White Oaks in Iberia requires that environmental variables operating at distinct scales are considered. These include climate, but also ecosystem functioning attributes (EFAs) related to energy–matter exchanges that characterize land cover types under various environmental settings, at finer scales. Here, we used satellite-based EFAs and climate variables in species distribution models (SDMs) to assess how variables related to ecosystem functioning improve our understanding of current distributions and the identification of suitable areas for White Oak species in Iberia. We developed consensus ensemble SDMs targeting a set of thirteen oaks, including both narrow endemic and widespread taxa. Models combining EFAs and climate variables obtained a higher performance and predictive ability (true-skill statistic (TSS): 0.88, sensitivity: 99.6, specificity: 96.3), in comparison to the climate-only models (TSS: 0.86, sens.: 96.1, spec.: 90.3) and EFA-only models (TSS: 0.73, sens.: 91.2, spec.: 82.1). Overall, narrow endemic species obtained higher predictive performance using combined models (TSS: 0.96, sens.: 99.6, spec.: 96.3) in comparison to widespread oaks (TSS: 0.80, sens.: 92.6, spec.: 87.7). The Iberian White Oaks show a high dependence on precipitation and the inter-quartile range of Normalized Difference Water Index (NDWI) (i.e., seasonal water availability) which appears to be the most important EFA variable. Spatial projections of climate–EFA combined models contribute to identify the major diversity hotspots for White Oaks in Iberia, holding higher values of cumulative habitat suitability and species richness. We discuss the implications of these findings for guiding the long-term conservation of Iberian White Oaks and provide spatially explicit geospatial information about each oak species (or set of species) relevant for developing biogeographic conservation frameworks. [ABSTRACT FROM AUTHOR]

Grapevine ( Vitis vinifera L.) diversity richness results from a complex domestication history over multiple historical periods. Here, we used whole-genome resequencing to elucidate different aspects of its recent evolutionary history. Our results support a model in which a central domestication event in grapevine was followed by postdomestication hybridization with local wild genotypes, leading to the presence of an introgression signature in modern wine varieties across Western Europe. The strongest signal was associated with a subset of Iberian grapevine varieties showing large introgression tracts. We targeted this study group for further analysis, demonstrating how regions under selection in wild populations from the Iberian Peninsula were preferentially passed on to the cultivated varieties by gene flow. Examination of underlying genes suggests that environmental adaptation played a fundamental role in both the evolution of wild genotypes and the outcome of hybridization with cultivated varieties, supporting a case of adaptive introgression in grapevine.