26 results on '"Wahaab, Abdul"'
Search Results
2. The interactions of flaviviruses with cellular receptors: Implications for virus entry
- Author
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Anwar, Muhammad Naveed, Akhtar, Raheela, Abid, Muhammad, Khan, Shahzad Akbar, Rehman, Zaib Ur, Tayyub, Muhammad, Malik, Muhammad Irfan, Shahzad, Muhammad Khurram, Mubeen, Hadia, Qadir, Muhammad Shahzad, Hameed, Muddassar, Wahaab, Abdul, Li, Zongjie, Liu, Ke, Li, Beibei, Qiu, Yafeng, Ma, Zhiyong, and Wei, Jianchao
- Published
- 2022
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3. Downregulation of miR-296-3p by highly pathogenic porcine reproductive and respiratory syndrome virus activates the IRF1/TNF-α signaling axis in porcine alveolar macrophages
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Zhang, Yanbing, Xiang, Xiao, Lu, Yan, Li, Hui, Wahaab, Abdul, Sharma, Mona, Liu, Ke, Wei, Jianchao, Li, Zongjie, Shao, Donghua, Li, Beibei, Ma, Zhiyong, and Qiu, Yafeng
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- 2021
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4. A Metagenomic Analysis of Mosquito Virome Collected From Different Animal Farms at Yunnan-Myanmar Border of China.
- Author
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Hameed, Muddassar, Wahaab, Abdul, Tongling Shan, Xin Wang, Khan, Sawar, Di Di, Liu Xiqian, Jun-Jie Zhang, Anwar, Muhammad Naveed, Nawaz, Mohsin, Beibei Li, Ke Liu, Donghua Shao, Yafeng Qiu, Jianchao Wei, and Zhiyong Ma
- Subjects
RHABDOVIRUSES ,PARVOVIRUSES ,DOMESTIC animals ,CLONORCHIS sinensis ,METAGENOMICS ,VETERINARY public health ,AEDES aegypti ,JAPANESE encephalitis viruses ,MOSQUITOES - Abstract
Metagenomic analysis of mosquito-borne and mosquito-specific viruses is useful to understand the viral diversity and for the surveillance of pathogens of medical and veterinary importance. Yunnan province is located at the southwest of China and has rich abundance of mosquitoes. Arbovirus surveillance is not conducted regularly in this province particularly at animal farms, which have public health as well as veterinary importance. Here, we have analyzed 10 pools of mosquitoes belonging to Culex tritaeniorhyncus, Aedes aegypti, Anopheles sinensis, and Armigeres subalbatus species, collected from different animal farms located at Yunnan province of China by using metagenomic next-generation sequencing technique. The generated viral metagenomic data reveal that the viral community matched by the reads was highly diverse and varied in abundance among animal farms, which contained more than 19 viral taxonomic families, specific to vertebrates, invertebrates, fungi, plants, protozoa, and bacteria. Additionally, a large number of viral reads were related to viruses that are non-classified. The viral reads related to animal viruses included parvoviruses, anelloviruses, circoviruses, flaviviruses, rhabdoviruses, and seadornaviruses, which might be taken by mosquitoes from viremic animal hosts during blood feeding. Notably, the presence of viral reads matched with Japanese encephalitis virus, Getah virus, and porcine parvoviruses in mosquitoes collected from different geographic sites suggested a potential circulation of these viruses in their vertebrate hosts. Overall, this study provides a comprehensive knowledge of diverse viral populations present at animal farms of Yunnan province of China, which might be a potential source of diseases for humans and domestic animals. [ABSTRACT FROM AUTHOR]
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- 2024
- Full Text
- View/download PDF
5. Development of Colloidal Gold-Based Immunochromatographic Strips for Rapid Detection and Surveillance of Japanese Encephalitis Virus in Dogs across Shanghai, China.
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Zhong, Dengke, Wahaab, Abdul, Zheng, Jiayang, Zhang, Junjie, Ma, Zhiyong, and Wei, Jianchao
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JAPANESE encephalitis viruses , *DOGS , *DETECTOR dogs , *COLLOIDAL gold , *ENZYME-linked immunosorbent assay , *NEUTRALIZATION tests , *RECOMBINANT proteins - Abstract
Japanese encephalitis virus (JEV) causes acute encephalitis in humans and is of major public health concern in most Asian regions. Dogs are suitable sentinels for assessing the risk of JEV infection in humans. A neutralization test (NT) or an enzyme-linked immunosorbent assay (ELISA) is used for the serological detection of JEV in dogs; however, these tests have several limitations, and, thus, a more convenient and reliable alternative test is needed. In this study, a colloidal gold immunochromatographic strip (ICS), using a purified recombinant EDIII protein, was established for the serological survey of JEV infection in dogs. The results show that the ICSs could specifically detect JEV antibodies within 10 min without cross-reactions with antibodies against other canine viruses. The test strips could detect anti-JEV in serum with dilution up to 640 times, showing high sensitivity. The coincidence rate with the NT test was higher than 96.6%. Among 586 serum samples from dogs in Shanghai examined using the ICS test, 179 (29.98%) were found to be positive for JEV antibodies, and the high seropositivity of JEV in dogs in China was significantly correlated with the season and living environment. In summary, we developed an accurate and economical ICS for the rapid detection of anti-JEV in dog serum samples with great potential for the surveillance of JEV in dogs. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Duck karyopherin α4 (duKPNA4) is involved in type I interferon expression and the antiviral response against Japanese encephalitis virus
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Li, Chenxi, Di, Di, Wang, Xin, Xia, Qiqi, Wahaab, Abdul, Anwar, Muhammad Naveed, Li, Zongjie, Liu, Ke, Shao, Donghua, Qiu, Yafeng, Wei, Jianchao, Li, Beibei, and Ma, Zhiyong
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- 2020
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7. Recent Population Dynamics of Japanese Encephalitis Virus.
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Xu, Jinpeng, Wahaab, Abdul, Khan, Sawar, Nawaz, Mohsin, Anwar, Muhammad Naveed, Liu, Ke, Wei, Jianchao, Hameed, Muddassar, and Ma, Zhiyong
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POPULATION dynamics , *JAPANESE encephalitis viruses , *VIRAL encephalitis , *GENETIC variation , *MOSQUITO control , *SWINE farms , *DEATH rate , *INFECTIOUS disease transmission - Abstract
Japanese encephalitis virus (JEV) causes acute viral encephalitis in humans and reproductive disorders in pigs. JEV emerged during the 1870s in Japan, and since that time, JEV has been transmitted exclusively throughout Asia, according to known reporting and sequencing records. A recent JEV outbreak occurred in Australia, affecting commercial piggeries across different temperate southern Australian states, and causing confirmed infections in humans. A total of 47 human cases and 7 deaths were reported. The recent evolving situation of JEV needs to be reported due to its continuous circulation in endemic regions and spread to non-endemics areas. Here, we reconstructed the phylogeny and population dynamics of JEV using recent JEV isolates for the future perception of disease spread. Phylogenetic analysis shows the most recent common ancestor occurred about 2993 years ago (YA) (95% Highest posterior density (HPD), 2433 to 3569). Our results of the Bayesian skyline plot (BSP) demonstrates that JEV demography lacks fluctuations for the last two decades, but it shows that JEV genetic diversity has increased during the last ten years. This indicates the potential JEV replication in the reservoir host, which is helping it to maintain its genetic diversity and to continue its dispersal into non-endemic areas. The continuous spread in Asia and recent detection from Australia further support these findings. Therefore, an enhanced surveillance system is needed along with precautionary measures such as regular vaccination and mosquito control to avoid future JEV outbreaks. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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8. Potential Role of Flavivirus NS2B-NS3 Proteases in Viral Pathogenesis and Anti-flavivirus Drug Discovery Employing Animal Cells and Models: A Review
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Wahaab, Abdul, Mustafa, Bahar E, Hameed, Muddassar, Stevenson, Nigel J., Anwar, Muhammad Naveed, Liu, Ke, Wei, Jianchao, Qiu, Yafeng, and Ma, Zhiyong
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viruses ,virus diseases ,biochemical phenomena, metabolism, and nutrition ,complex mixtures - Abstract
Flaviviruses are known to cause a variety of diseases in humans in different parts of the world. There are very limited numbers of antivirals to combat flavivirus infection, and therefore new drug targets must be explored. The flavivirus NS2B-NS3 proteases are responsible for the cleavage of the flavivirus polyprotein, which is necessary for productive viral infection and for causing clinical infections; therefore, they are a promising drug target for devising novel drugs against different flaviviruses. This review highlights the structural details of the NS2B-NS3 proteases of different flaviviruses, and also describes potential antiviral drugs that can interfere with the viral protease activity, as determined by various studies. Moreover, optimized in vitro reaction conditions for studying the NS2B-NS3 proteases of different flaviviruses may vary and have been incorporated in this review. The increasing availability of the in silico and crystallographic/structural details of flavivirus NS2B-NS3 proteases in free and drug-bound states can pave the path for the development of promising antiflavivirus drugs to be used in clinics. However, there is a paucity of information available on using animal cells and models for studying flavivirus NS2B-NS3 proteases, as well as on the testing of the antiviral drug efficacy against NS2B-NS3 proteases. Therefore, on the basis of recent studies, an effort has also been made to propose potential cellular and animal models for the study of flavivirus NS2B-NS3 proteases for the purposes of exploring flavivirus pathogenesis and for testing the efficacy of possible drugs targets, in vitro and in vivo. Published version
- Published
- 2021
9. Construction of a Recombinant Japanese Encephalitis Virus with a Hemagglutinin-Tagged NS2A: A Model for an Analysis of Biological Characteristics and Functions of NS2A during Viral Infection.
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Ma, Xiaochun, Li, Chenxi, Xia, Qiqi, Zhang, Yan, Yang, Yang, Wahaab, Abdul, Liu, Ke, Li, Zongjie, Li, Beibei, Qiu, Yafeng, Wei, Jianchao, and Ma, Zhiyong
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JAPANESE encephalitis viruses ,VIRUS diseases ,BIOLOGICAL models ,HEMAGGLUTININ ,PEPTIDES ,VIRAL replication ,ENDOPLASMIC reticulum - Abstract
Nonstructural protein 2A (NS2A) of the Japanese encephalitis virus (JEV) contributes to viral replication and pathogenesis; however, a lack of NS2A-specific antibodies restricts studies on the underlying mechanisms. In this study, we constructed a recombinant JEV with a hemagglutinin (HA)-tagged NS2A (JEV-HA/NS2A/∆NS1') to overcome this challenge. An HA-tag was fused to the N-terminus of NS2A (HA-NS2A) at the intergenic junction between NS1 and NS2A. A peptide linker, "FNG", was added to the N-terminus of HA-tag to ensure correct cleavage between the C-terminus of NS1 and the N-terminus of HA-NS2A. To avoid the side effects of an unwanted NS1' tagged with HA (HA-NS1'), an alanine-to-proline (A30P) substitution was introduced at residue 30 of NS2A to abolish HA-NS1' production. The HA-tag insertion and A30P substitution were stably present in JEV-HA/NS2A/∆NS1' after six passages and did not exhibit any significant effects on viral replication and plaque morphology. Taking advantage of HA-NS2A, we examined the activities of NS2A during JEV infection in vitro using anti-HA antibodies. NS2A was observed to be localized to the endoplasmic reticulum and interact with viral NS2B and NS3 during virus infection. These data suggest that JEV-HA/NS2A/∆NS1' can serve as a model for the analysis of the biological characteristics and functions of NS2A in vitro during JEV infection. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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10. Detection of Japanese encephalitis virus in mosquitoes from Xinjiang during next‐generation sequencing arboviral surveillance.
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Hameed, Muddassar, Khan, Sawar, Xu, Jinpeng, Zhang, Junjie, Wang, Xin, Di, Di, Chen, Zheng, Naveed Anwar, Muhammad, Wahaab, Abdul, Ma, Xiaochun, Nawaz, Mohsin, Liu, Ke, Li, Beibei, Shao, Donghua, Qiu, Yafeng, Wei, Jianchao, and Ma, Zhiyong
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JAPANESE encephalitis viruses ,MOSQUITOES ,DOMESTIC animals - Abstract
A total of 548 mosquitoes were collected from different animal farms located near to highly populated cities in Xinjiang and were subjected to metagenomic next‐generation sequencing (mNGS). The mNGS data demonstrated that 18,842 (XJ1 strain) and 1,077 (XJ2 strain) of Japanese encephalitis virus (JEV)‐related reads were detected in XJ1 and XJ2 mosquito samples collected from Wushi and Wensu counties of Aksu area, which accounted for 0.032% and 0.006% of the total clean reads generated from XJ1 and XJ2 samples, respectively. The Bayesian molecular phylogenetic analysis suggested that XJ1 and XJ2 strains belonged to JEV genotype III and were clustered with JEV strains isolated in China. Notably, Bayesian molecular time line phylogeny revealed that XJ1 strain shared its MRCA with JEV GSS strain about 67 YA, suggesting that XJ1 strain likely originated from linages closely related to GSS strain and spread to Xinjiang later. Overall, these findings suggest that Xinjiang was probably not free from JEV, and thus, a further surveillance of JEV is required in Xinjiang. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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11. A Metagenomic Analysis of Mosquito Virome Collected From Different Animal Farms at Yunnan–Myanmar Border of China.
- Author
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Hameed, Muddassar, Wahaab, Abdul, Shan, Tongling, Wang, Xin, Khan, Sawar, Di, Di, Xiqian, Liu, Zhang, Jun-Jie, Anwar, Muhammad Naveed, Nawaz, Mohsin, Li, Beibei, Liu, Ke, Shao, Donghua, Qiu, Yafeng, Wei, Jianchao, and Ma, Zhiyong
- Subjects
JAPANESE encephalitis viruses ,DOMESTIC animals ,MOSQUITOES ,CLONORCHIS sinensis ,RHABDOVIRUSES ,AEDES aegypti ,VETERINARY public health ,DOMESTIC animal diseases ,ANIMAL populations - Abstract
Metagenomic analysis of mosquito-borne and mosquito-specific viruses is useful to understand the viral diversity and for the surveillance of pathogens of medical and veterinary importance. Yunnan province is located at the southwest of China and has rich abundance of mosquitoes. Arbovirus surveillance is not conducted regularly in this province particularly at animal farms, which have public health as well as veterinary importance. Here, we have analyzed 10 pools of mosquitoes belonging to Culex tritaeniorhyncus , Aedes aegypti , Anopheles sinensis , and Armigeres subalbatus species, collected from different animal farms located at Yunnan province of China by using metagenomic next-generation sequencing technique. The generated viral metagenomic data reveal that the viral community matched by the reads was highly diverse and varied in abundance among animal farms, which contained more than 19 viral taxonomic families, specific to vertebrates, invertebrates, fungi, plants, protozoa, and bacteria. Additionally, a large number of viral reads were related to viruses that are non-classified. The viral reads related to animal viruses included parvoviruses, anelloviruses, circoviruses, flaviviruses, rhabdoviruses, and seadornaviruses, which might be taken by mosquitoes from viremic animal hosts during blood feeding. Notably, the presence of viral reads matched with Japanese encephalitis virus, Getah virus, and porcine parvoviruses in mosquitoes collected from different geographic sites suggested a potential circulation of these viruses in their vertebrate hosts. Overall, this study provides a comprehensive knowledge of diverse viral populations present at animal farms of Yunnan province of China, which might be a potential source of diseases for humans and domestic animals. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
12. A viral metagenomic analysis reveals rich viral abundance and diversity in mosquitoes from pig farms.
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Hameed, Muddassar, Liu, Ke, Anwar, Muhammad Naveed, Wahaab, Abdul, Li, Chenxi, Di, Di, Wang, Xin, Khan, Sawar, Xu, Jinpeng, Li, Beibei, Nawaz, Mohsin, Shao, Donghua, Qiu, Yafeng, Wei, Jianchao, and Ma, Zhiyong
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SWINE farms ,MOSQUITOES ,AEDES aegypti ,METAGENOMICS ,ANIMAL diseases ,VIRUS diseases ,VIRAL genomes ,MOSQUITO control - Abstract
Mosquitoes harbour a diversity of viruses and are responsible for several mosquito‐borne viral diseases of humans and animals, thereby leading to major public health concerns, and significant economic losses across the globe. Viral metagenomics offers a great opportunity for bulk analysis of viral genomes retrieved directly from environmental samples. In this study, we performed a viral metagenomic analysis of five pools of mosquitoes belonging to Aedes, Anopheles and Culex species, collected from different pig farms in the vicinity of Shanghai, China, to explore the viral community carried by mosquitoes. The resulting metagenomic data revealed that viral community in the mosquitoes was highly diverse and varied in abundance among pig farms, which comprised of more than 48 viral taxonomic families, specific to vertebrates, invertebrates, plants, fungi, bacteria and protozoa. In addition, a considerable number of viral reads were related to viruses that are not classified by host. The read sequences related to animal viruses included parvoviruses, anelloviruses, circoviruses, flavivirus, rhabdovirus and seadornaviruses, which might be taken up by mosquitoes from viremic animal hosts during blood feeding. Notably, sample G1 contained the most abundant sequence related to Banna virus, which is of public health interest because it causes encephalitis in humans. Furthermore, non‐classified viruses also shared considerable virus sequences in all the samples, presumably belonging to unexplored virus category. Overall, the present study provides a comprehensive knowledge of diverse viral populations carried by mosquitoes at pig farms, which is a potential source of diseases for mammals including humans and animals. These viral metagenomic data are valuable for assessment of emerging and re‐emerging viral epidemics. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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13. The emerged genotype I of Japanese encephalitis virus shows an infectivity similar to genotype III in Culex pipiens mosquitoes from China.
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Hameed, Muddassar, Liu, Ke, Anwar, Muhammad Naveed, Wahaab, Abdul, Safdar, Anum, Di, Di, Boruah, Prerona, Xu, Jinpeng, Wang, Xin, Li, Beibei, Zhu, Huaimin, Nawaz, Mohsin, Shao, Donghua, Qiu, Yafeng, Wei, Jianchao, and Ma, Zhiyong
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JAPANESE encephalitis viruses ,CULEX pipiens ,MOSQUITOES ,GENOTYPES ,SALIVARY glands - Abstract
Japanese Encephalitis virus (JEV) is a zoonotic flavivirus that represents the most significant etiology of childhood viral neurological infections throughout the Asia. During the last 20 years, JEV genotype dominance has shifted from genotype III (GIII) to genotype I (GI). To date, the exact mechanism of this displacement is still not known. Culex (Cx.) mosquitoes are the most common species in China and play an essential role in maintaining JEV enzootic transmission cycle. In this study, we used Cx. pipiens mosquitoes from China as an in vivo mosquito model to explore if mosquitoes played a potential role in JEV genotype shift. We exposed female Cx. pipiens mosquitoes orally to either GI or GIII JEV strains. Midgut, whole mosquitoes, secondary organs, and salivary glands of JEV-infected mosquitoes were collected at 7 and 14 days of post infection (dpi) and subjected to measure the infection rate, replication kinetics, dissemination rate and transmission potential of the infected JEV strains in Cx. pipiens mosquitoes by 50% tissue culture infective dose assay. We found that Cx. pipiens mosquito was competent vector for both GI and GIII JEV infection, with similar infection rates and growth kinetics. After the establishment of infection, Cx. pipiens mosquitoes disseminated both JEV genotypes to secondary organs at similar rates of dissemination. A few GI-infected mosquito salivary glands (16.2%) were positive for GI virus, whereas GIII virus was undetectable in GIII-infected mosquito salivary glands at 7 dpi. However, 29.4% (5/17) and 36.3% (8/22) were positive for GI- and GIII-infected mosquito salivary glands at 14 dpi, respectively, showing an increase in JEV positive rate. No statistical difference in the transmission rate between GI- and GIII-infected mosquitoes was detected. Our experiment data demonstrated that GI and GIII viruses have similar infectivity in Cx. pipiens mosquitoes, suggesting that Cx. pipiens mosquitoes from China may not play a critical role in JEV genotype shift. Although the current data were obtained solely from Cx. pipiens mosquitoes, it is likely that the conclusion drawn could be extrapolated to the role of mosquitoes in JEV genotype shift. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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14. Comparative Efficacy of Triclabendazole, Oxyclozanide and Nitroxynil against Bovine Fasciolosis and its Effect on Various Blood Parameters.
- Author
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Wahaab, Abdul, Ijaz, Muhammad, Ahmad, Syed Saleem, Iqbal, Umair, Tawaab, Abdul, and khan, Iahtasham
- Abstract
A study was conducted in order to determine the comparative efficacy of Triclabendazole, Oxyclozanide and Nitroxynil against Fasciola sp. infestated bovines (cattle and buffaloes) and their effect on various blood parameters (WBC, RBC, Hb, HCT and MCHC). For this purpose, 40 infected animals were selected. After dividing them randomly in four groups of 10 animals each, drug was administered to first three groups whereas last one was kept under positive control for comparison. Study revealed that Triclabendazole was most effective drug of all three in both cattle and buffaloes with efficacy of 97.92% and 100%, respectively; Oxyclozanide was 2
nd most effective with efficacy of 96.87% and 97.05% % whereas Nitroxynil remained at last with efficacy of 93.47% and 92.15% at 21st day post-medication. A slight increase of egg counts was observed in positive control groups of both animal categories. Blood parameters of healthy and Fasciola infected animals (cattle's and buffaloes) were compared; specifically, Mean±S.E.M value of WBCs (white blood cells) in infected animals had increased compared to healthy animals. At the same time, significant decrease was observed in RBCs (red blood cells), Hb (haemoglobin), and HCT (hematocrit) in Fasciola infected animals compared to health animals but no significant difference was observed in MCHC (meancorpuscular hemoglobin concentration) quantity within both animal categories. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
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15. Molecular Epidemic Characteristics and Genetic Evolution of Porcine Circovirus Type 2 (PCV2) in Swine Herds of Shanghai, China.
- Author
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Kang, Le, Wahaab, Abdul, Shi, Kun, Mustafa, Bahar E, Zhang, Yan, Zhang, Junjie, Li, Zongjie, Qiu, Yafeng, Li, Beibei, Liu, Ke, Shao, Donghua, Ma, Zhiyong, Zhong, Dengke, and Wei, Jianchao
- Subjects
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CIRCOVIRUS diseases , *SWINE diseases , *SWINE farms , *MOLECULAR epidemiology , *ANIMAL herds , *SWINE - Abstract
Porcine Circovirus 2 (PCV2) is a crucial swine pathogen and considered a primary causative agent of porcine circovirus-associated diseases (PCVADs), posing a serious economic threat to the swine industry across globe. The world's biggest agricultural conglomerates have teamed up to create giant commercial pig farms across Shanghai due to the proximity of this region to more affluent lean-pork markets. Since its discovery, PCV2 has displayed extraordinary genetic diversity, and its genome is swiftly evolving through a series of mutations and recombinations. However, limited information on epidemiology, molecular characteristics, vaccine cross-protection, and the co-infection rate of PCV2 with other lethal swine diseases can adversely impact the pig production in the region. To investigate the molecular epidemic characteristics and genetic evolution of PCV2, pigs with doubtful symptoms of PCVADs were sampled from various commercial pig farms with a history of PWMS and/or PDNS across Shanghai from 2014 to 2018. Our results revealed the coexistence of multiple PCV2 genotypes (PCV2b, PCV2e, and PCV2d) among Shanghai pig herds and dominance of PCV2d among them. We also found critical amino acid substitutions in epitope regions of important capsid proteins in PCV2 isolates involved in viral replication and host immune escape. Spotted mutations may favor the prevalence and survival of various PCV2 genotypes despite availability of commercial vaccines. This study also provides insight into the co-infection status of PCV2 with major lethal swine viral diseases such as PPV and PPRSV. Collectively, these investigations will contribute to understanding the molecular epidemiology and evolution of PCV2 across the region. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
16. Potential Role of Flavivirus NS2B-NS3 Proteases in Viral Pathogenesis and Anti-flavivirus Drug Discovery Employing Animal Cells and Models: A Review.
- Author
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Wahaab, Abdul, Mustafa, Bahar E, Hameed, Muddassar, Stevenson, Nigel J., Anwar, Muhammad Naveed, Liu, Ke, Wei, Jianchao, Qiu, Yafeng, and Ma, Zhiyong
- Subjects
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FLAVIVIRUSES , *FLAVIVIRAL diseases , *ANIMAL models in research , *VIRUS diseases , *PROTEOLYTIC enzymes , *DRUG target - Abstract
Flaviviruses are known to cause a variety of diseases in humans in different parts of the world. There are very limited numbers of antivirals to combat flavivirus infection, and therefore new drug targets must be explored. The flavivirus NS2B-NS3 proteases are responsible for the cleavage of the flavivirus polyprotein, which is necessary for productive viral infection and for causing clinical infections; therefore, they are a promising drug target for devising novel drugs against different flaviviruses. This review highlights the structural details of the NS2B-NS3 proteases of different flaviviruses, and also describes potential antiviral drugs that can interfere with the viral protease activity, as determined by various studies. Moreover, optimized in vitro reaction conditions for studying the NS2B-NS3 proteases of different flaviviruses may vary and have been incorporated in this review. The increasing availability of the in silico and crystallographic/structural details of flavivirus NS2B-NS3 proteases in free and drug-bound states can pave the path for the development of promising antiflavivirus drugs to be used in clinics. However, there is a paucity of information available on using animal cells and models for studying flavivirus NS2B-NS3 proteases, as well as on the testing of the antiviral drug efficacy against NS2B-NS3 proteases. Therefore, on the basis of recent studies, an effort has also been made to propose potential cellular and animal models for the study of flavivirus NS2B-NS3 proteases for the purposes of exploring flavivirus pathogenesis and for testing the efficacy of possible drugs targets, in vitro and in vivo. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
17. A Novel Recombinant Virus-Like Particles Displaying B and T Cell Epitopes of Japanese Encephalitis Virus Offers Protective Immunity in Mice and Guinea Pigs.
- Author
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Anwar, Muhammad Naveed, Jiang, Chunying, Di, Di, Zhang, Junjie, Guo, Shuang, Wang, Xin, Hameed, Muddassar, Wahaab, Abdul, Shao, Donghua, Li, Zongjie, Liu, Ke, Li, Beibei, Qiu, Yafeng, Ma, Zhiyong, and Wei, Jianchao
- Subjects
JAPANESE encephalitis viruses ,GUINEA pigs ,VIRUS-like particles ,B cells ,T cells - Abstract
Virus-like particles (VLPs) are non-replicative vectors for the delivery of heterologous epitopes and are considered one of the most potent inducers of cellular and humoral immune responses in mice and guinea pigs. In the present study, VLP-JEVe was constructed by the insertion of six Japanese encephalitis virus (JEV) envelope protein epitopes into different surface loop regions of PPV VP2 by the substitution of specific amino acid sequences without altering the assembly of the virus; subsequently, the protective efficacy of this VLP-JEVe was evaluated against JEV challenge in mice and guinea pigs. Mice immunized with the VLP-JEVe antigen developed high titers of neutralizing antibodies and 100% protection against lethal JEV challenge. The neutralizing and hemagglutination inhibition (HI) antibody responses were also induced in guinea pigs vaccinated with VLP-JEVe. In addition, immunization with VLP-JEVe in mice induced effective neutralizing antibodies and protective immunity against PPV (porcine parvovirus) challenge in guinea pigs. These studies suggest that VLP-JEVe produced as described here could be a potential candidate for vaccine development. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
18. Potential Role of Birds in Japanese Encephalitis Virus Zoonotic Transmission and Genotype Shift.
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Hameed, Muddassar, Wahaab, Abdul, Nawaz, Mohsin, Khan, Sawar, Nazir, Jawad, Liu, Ke, Wei, Jianchao, Ma, Zhiyong, and Bielefeldt-Ohmann, Helle
- Subjects
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JAPANESE encephalitis viruses , *BIRD food , *GENOTYPES , *JAPANESE B encephalitis , *CICONIIFORMES , *WATER birds , *MOSQUITO vectors - Abstract
Japanese encephalitis (JE) is a vaccine-preventable disease caused by the Japanese encephalitis virus (JEV), which is primarily prevalent in Asia. JEV is a Flavivirus, classified into a single serotype with five genetically distinct genotypes (I, II, III, IV, and V). JEV genotype III (GIII) had been the most dominant strain and caused numerous outbreaks in the JEV endemic countries until 1990. However, recent data shows the emergence of JEV genotype I (GI) as a dominant genotype and it is gradually displacing GIII. The exact mechanism of this genotype displacement is still unclear. The virus can replicate in mosquito vectors and vertebrate hosts to maintain its zoonotic life cycle; pigs and aquatic wading birds act as an amplifying/reservoir hosts, and the humans and equines are dead-end hosts. The important role of pigs as an amplifying host for the JEV is well known. However, the influence of other domestic animals, especially birds, that live in high abundance and close proximity to the human is not well studied. Here, we strive to briefly highlight the role of birds in the JEV zoonotic transmission, discovery of birds as a natural reservoirs and amplifying host for JEV, species of birds susceptible to the JEV infection, and the proposed effect of JEV on the poultry industry in the future, a perspective that has been neglected for a long time. We also discuss the recent in vitro and in vivo studies that show that the newly emerged GI viruses replicated more efficiently in bird-derived cells and ducklings/chicks than GIII, and an important role of birds in the JEV genotype shift from GIII to GI. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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- View/download PDF
19. Identification of Cleavage Sites Proteolytically Processed by NS2B-NS3 Protease in Polyprotein of Japanese Encephalitis Virus.
- Author
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Wahaab, Abdul, Liu, Ke, Hameed, Muddassar, Anwar, Muhammad Naveed, Kang, Lei, Li, Chenxi, Ma, Xiaochun, Wajid, Abdul, Yang, Yi, Khan, Umair Hassan, Wei, Jianchao, Li, Beibei, Shao, Donghua, Qiu, Yafeng, and Ma, Zhiyong
- Subjects
JAPANESE encephalitis viruses ,GREEN fluorescent protein ,EUKARYOTIC cells ,WESTERN immunoblotting - Abstract
Understanding the proteolytic processing of polyprotein mediated by NS2B-NS3 protease contributes to the exploration of the mechanisms underlying infection of Japanese encephalitis virus (JEV), a zoonotic flavivirus. In this study, eukaryotic and prokaryotic cell models were employed to identify the cleavage sites mediated by viral NS2B-NS3 protease in JEV polyprotein. Artificial green fluorescent protein (GFP) substrates that contained the predicted cleavage site sequences of JEV polyprotein were expressed in swine testicle (ST) cells in the presence and absence of JEV infection, or co-expressed in E. coli with the recombinant NS2B-NS3 protease that was generated by fusing the N-terminal protease domain of NS3 to the central hydrophilic domain of NS2B. The cleavage of GFP substrates was examined by western blot. Among twelve artificial GFP substrates containing the cleavage site sequences predictively processed by host cell and/or NS2B-NS3 proteases, all sites were found to be cleaved by host cell proteases with different efficiencies. The sites at internal C, NS2A/NS2B, NS2B/NS3 and NS3/NS4A junctions, but not the sites at internal NS3, internal NS4A and NS4B/NS5 junctions were identified to be cleaved by JEV NS2B-NS3 protease. These data provide insight into the proteolytic processing of polyprotein, which is useful for understanding JEV replication and pathogenesis. [ABSTRACT FROM AUTHOR]
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- 2021
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20. Phenotypic and Genotypic Comparison of a Live-Attenuated Genotype I Japanese Encephalitis Virus SD12-F120 Strain with Its Virulent Parental SD12 Strain.
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Anwar, Muhammad Naveed, Wang, Xin, Hameed, Muddassar, Wahaab, Abdul, Li, Chenxi, Sharma, Mona, Pang, Linlin, Malik, Muhammad Irfan, Liu, Ke, Li, Beibei, Qiu, Yafeng, Wei, Jianchao, and Ma, Zhiyong
- Subjects
JAPANESE encephalitis viruses ,AFRICAN swine fever ,GENOTYPES ,AMINO acids - Abstract
The phenotypic and genotypic characteristics of a live-attenuated genotype I (GI) strain (SD12-F120) of Japanese encephalitis virus (JEV) were compared with its virulent parental SD12 strain to gain an insight into the genetic changes acquired during the attenuation process. SD12-F120 formed smaller plaque on BHK-21 cells and showed reduced replication in mouse brains compared with SD12. Mice inoculated with SD12-F120 via either intraperitoneal or intracerebral route showed no clinical symptoms, indicating a highly attenuated phenotype in terms of both neuroinvasiveness and neurovirulence. SD12-F120 harbored 29 nucleotide variations compared with SD12, of which 20 were considered silent nucleotide mutations, while nine resulted in eight amino acid substitutions. Comparison of the amino acid variations of SD12-F120 vs. SD12 pair with those from other four isogenic pairs of the attenuated and their virulent parental strains revealed that the variations at E
138 and E176 positions of E protein were identified in four and three pairs, respectively, while the remaining amino acid variations were almost unique to their respective strain pairs. These observations suggest that the genetic changes acquired during the attenuation process were likely to be strain-specific and that the mechanisms associated with JEV attenuation/virulence are complicated. [ABSTRACT FROM AUTHOR]- Published
- 2020
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21. Mosquito defensin facilitates Japanese encephalitis virus infection by downregulating the C6/36 cell-surface antiviral protein HSC70B.
- Author
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Liu, Ke, Hou, Fengxiang, Wahaab, Abdul, Kang, Lei, Xie, Fengyu, Ma, Xiaochun, Xia, Qiqi, Xiao, Changguang, Shao, Donghua, Li, Beibei, Wei, Jianchao, Qiu, Yafeng, Zhu, Huaimin, and Ma, Zhiyong
- Subjects
- *
JAPANESE encephalitis viruses , *VIRUS diseases , *MOSQUITOES , *CELL membranes , *VIRAL encephalitis , *MOSQUITO vectors , *CULEX - Abstract
• Mosquito defensin facilitates JEV infection within mosquito. • Mosquito defensin down-regulates cell surface antiviral protein HSC70B. • Mosquito defensin-HSC70B axis impacts JEV infection in in vivo and in vitro. Japanese encephalitis virus (JEV) is a viral zoonosis that can cause viral encephalitis, death and disability whose primary vector is the Culex mosquito. Viral infection induces a series of antimicrobial peptide responses in mosquitoes, and the effector defensin enhances JEV replication in mosquitoes. However, the underlying mechanisms by which defensin enhances JEV are not fully understood. Here, we found that mosquito defensin could downregulate the antiviral protein HSC70B and enhance virus infection in mosquitoes. The cell-surface protein HSC70B was significantly downregulated by JEV infection and defensin treatment. Low levels of HSC70B were beneficial to JEV infection in mosquitoes. Taken together, these findings show that defensin and HSC70B axis facilitates JEV infection in the mosquito. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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22. Adaptation of a live-attenuated genotype I Japanese encephalitis virus to vero cells is associated with mutations in structural protein genes.
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Anwar, Muhammad Naveed, Guo, Shuang, Xin, Wang, Hameed, Muddassar, Wahaab, Abdul, Ma, Xiaochun, Khan, Aman Ullah, Rahman, Sajid Ur, Shao, Donghua, Li, Zongjie, Liu, Ke, Li, Beibei, Qiu, Yafeng, Ma, Zhiyong, and Wei, Jianchao
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JAPANESE encephalitis viruses , *CYTOSKELETAL proteins , *ANTIBODY titer , *GENOTYPES , *VACCINE effectiveness , *CELLS - Abstract
• SD12-F120VC has higher titer and adaptation to growth in Vero cells • SD12-F120VC has high attenuated phenotype in suckling mice and has small plaque morphology • SD12-F120VC provided the complete protection against challenge with homologous strain, but not for the heterologous strain. • The neutralizing antibodies titer was high against homologous strains but low for heterologous strain. • Some mutations in the pr domain of prM may be involved in Vero cell adaptation The SD12-F120 is a live-attenuated genotype I strain of Japanese encephalitis virus (JEV) and was obtained by serial passage of wild-type strain SD12 on BHK-21 cells combined with multiple plaque purification and virulence selection in mice. The large scale production and vast clinical trials always demand ideal safety and efficacy profile of live-attenuated vaccines. In the present study, SD12-F120VC has undergone serial passaging of P1-P30 in WHO qualified Vero cells to assess the potential effect of adaptation to growth on Vero cells. The series of experiments showed that vaccine SD12-F120VC (Vero cell adapted) variants have consistently increased in peak virus titer compared to early passages and have good adaptation to growth in Vero cells. The animal experiments showed that Vero cell adapted SD12-F120VC variants have attenuation phenotype in suckling mice and the plaque morphology for all SD12-F120VC variants was small. Vaccination of mice with SD12-F120VC vaccine produced complete protection for homologous SD12 genotype I strain, but failed to give the complete protection of vaccinated mice against the challenge of heterologous N28 genotype III strain. In response to immunization of SD12-F120VC in mice, the neutralizing antibodies titer against homologous SD12-F120VC and SD12 (GI) was higher than heterologous N28 (GIII) strain. The prM protein has 6 amino acid substitutions, of which 5 amino acid changes were confined at the start of the pr domain in the ∼40 amino acids, and some mutations in the pr domain of prM might contribute to Vero cell adaptation. Our findings in this study are important for validation, evaluation and quality control study of live attenuated flaviviruses vaccines and show that Vero cells are a suitable substrate for the production of a safe and stable live-attenuated JEV vaccine. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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23. Corrigendum: A metagenomic analysis of mosquito virome collected from different animal farms at Yunnan-Myanmar border of China.
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Hameed M, Wahaab A, Shan T, Wang X, Khan S, Di D, Xiqian L, Zhang JJ, Anwar MN, Nawaz M, Li B, Liu K, Shao D, Qiu Y, Wei J, and Ma Z
- Abstract
[This corrects the article DOI: 10.3389/fmicb.2020.591478.]., (Copyright © 2024 Hameed, Wahaab, Shan, Wang, Khan, Di, Xiqian, Zhang, Anwar, Nawaz, Li, Liu, Shao, Qiu, Wei and Ma.)
- Published
- 2024
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24. NS2B-D55E and NS2B-E65D Variations are Responsible for Differences in NS2B-NS3 Protease Activities Between Japanese Encephalitis Virus Genotype I and III in Fluorogenic Peptide Model.
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Wahaab A, Zhang Y, Rasgon JL, Kang L, Hameed M, Li C, Anwar MN, Zhang Y, Shoaib A, Liu K, Lee B, Wei J, Qiu Y, and Ma Z
- Abstract
Japanese Encephalitis Virus (JEV) NS2B-NS3 is a protein complex composed of NS3 proteases and a NS2B cofactor. The N-terminal protease domain (180 residues) of NS3 (NS3(pro)) interacts directly with a central 40-amino acid hydrophilic domain of NS2B (NS2B(H)) to form an active serine protease. In this study, the recombinant NS2B(H)-NS3(pro) proteases were prepared in E. coli and used to compare the enzymatic activity between genotype I (GI) and III (GIII) NS2B-NS3 proteases. The GI NS2B(H)-NS3(pro) was able to cleave the sites at internal C, NS2A/NS2B, NS2B/NS3 and NS3/NS4A junctions that were identical to the sites proteolytically processed by GIII NS2B(H)-NS3(pro). Analysis of the enzymatic activity of recombinant NS2B(H)-NS3(pro) proteases using a model of fluorogenic peptide substrate revealed that the proteolytical processing activity of GIII NS2B(H)-NS3(pro) was significantly higher than that of GI NS2B(H)-NS3(pro). There were eight amino acid variations between GI and GIII NS2B(H)-NS3(pro), which may be responsible for the difference in enzymatic activities between GI and GIII proteases. Therefore, recombinant mutants were generated by exchanging NS2B(H) and NS3(pro) domains between GI and GIII NS2B(H)-NS3(pro) and subjected to protease activity analysis. Substitution of NS2B(H) significantly altered the protease activities, as compared to the parental NS2B(H)-NS3(pro), suggesting that NS2B(H) played an essential role in regulation of NS3(pro) protease activity. To further identify the amino acids responsible for the difference in protease activities, multiple substitution mutants including the individual and combined mutations at the variant residue 55 and 65 of NS2B(H) were generated and subjected to protease activity analysis. Replacement of NS2B-55 and NS2B-65 of GI to GIII significantly increased the enzymatic activity of GI NS2B(H)-NS3(pro) protease, whereas mutation of NS2B-55 and NS2B-65 of GIII to GI remarkably reduced the enzymatic activity of GIII NS2B(H)-NS3(pro) protease. Overall, these data demonstrated that NS2B-55 and NS2B-65 variations in hydrophilic domain of NS2B co-contributed to the difference in NS2B(H)-NS3(pro) protease activities between GI and GIII. These observations gain an insight into the role of NS2B in regulation of NS3 protease activities, which is useful for understanding the replication of JEV GI and GIII viruses., Competing Interests: Conflict of Interest The authors declare no conflict of interest.
- Published
- 2023
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25. Potential Role of Flavivirus NS2B-NS3 Proteases in Viral Pathogenesis and Anti-flavivirus Drug Discovery Employing Animal Cells and Models: A Review.
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Wahaab A, Mustafa BE, Hameed M, Stevenson NJ, Anwar MN, Liu K, Wei J, Qiu Y, and Ma Z
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- Animals, Dengue Virus, Drug Tapering, Encephalitis Virus, Japanese, Flavivirus genetics, Humans, Peptide Hydrolases genetics, Polyproteins, RNA Helicases genetics, Serine Endopeptidases genetics, Viral Nonstructural Proteins genetics, Viral Replicase Complex Proteins, West Nile virus, Yellow fever virus, Zika Virus, Antiviral Agents pharmacology, Drug Discovery, Flavivirus enzymology, Flavivirus Infections virology, Peptide Hydrolases metabolism, RNA Helicases metabolism, Serine Endopeptidases metabolism, Viral Nonstructural Proteins metabolism
- Abstract
Flaviviruses are known to cause a variety of diseases in humans in different parts of the world. There are very limited numbers of antivirals to combat flavivirus infection, and therefore new drug targets must be explored. The flavivirus NS2B-NS3 proteases are responsible for the cleavage of the flavivirus polyprotein, which is necessary for productive viral infection and for causing clinical infections; therefore, they are a promising drug target for devising novel drugs against different flaviviruses. This review highlights the structural details of the NS2B-NS3 proteases of different flaviviruses, and also describes potential antiviral drugs that can interfere with the viral protease activity, as determined by various studies. Moreover, optimized in vitro reaction conditions for studying the NS2B-NS3 proteases of different flaviviruses may vary and have been incorporated in this review. The increasing availability of the in silico and crystallographic/structural details of flavivirus NS2B-NS3 proteases in free and drug-bound states can pave the path for the development of promising antiflavivirus drugs to be used in clinics. However, there is a paucity of information available on using animal cells and models for studying flavivirus NS2B-NS3 proteases, as well as on the testing of the antiviral drug efficacy against NS2B-NS3 proteases. Therefore, on the basis of recent studies, an effort has also been made to propose potential cellular and animal models for the study of flavivirus NS2B-NS3 proteases for the purposes of exploring flavivirus pathogenesis and for testing the efficacy of possible drugs targets, in vitro and in vivo.
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- 2021
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26. Mosquito Defensins Enhance Japanese Encephalitis Virus Infection by Facilitating Virus Adsorption and Entry within the Mosquito.
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Liu K, Xiao C, Xi S, Hameed M, Wahaab A, Shao D, Li Z, Li B, Wei J, Qiu Y, Miao D, Zhu H, and Ma Z
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- Adsorption, Animals, Culex virology, Defensins metabolism, Encephalitis Virus, Japanese metabolism, Encephalitis, Japanese transmission, Encephalitis, Japanese virology, Gene Expression Regulation, Host-Pathogen Interactions genetics, Humans, Insect Proteins metabolism, Low Density Lipoprotein Receptor-Related Protein-2 metabolism, Mosquito Vectors virology, Protein Binding, Salivary Glands metabolism, Salivary Glands virology, Viral Envelope Proteins metabolism, Virus Internalization, Culex genetics, Defensins genetics, Encephalitis Virus, Japanese genetics, Insect Proteins genetics, Low Density Lipoprotein Receptor-Related Protein-2 genetics, Mosquito Vectors genetics, Viral Envelope Proteins genetics
- Abstract
Japanese encephalitis virus (JEV) is a viral zoonosis that can cause viral encephalitis, death, and disability. Although the Culex mosquito is the primary vector of JEV, little is known about JEV transmission by this kind of mosquito. Here, we found that mosquito defensin facilitated the adsorption of JEV on target cells via the defensin/lipoprotein receptor-related protein 2 (LRP2) axis. Mosquito defensin bound the ED III domain of the viral envelope (E) protein and directly mediated efficient virus adsorption on the target cell surface; the receptor LRP2, which is expressed on the cell surface, affected defensin-dependent adsorption. As a result, mosquito defensin enhanced JEV infection in the salivary gland, increasing the possibility of viral transmission by mosquitoes. These findings demonstrate the novel role of mosquito defensin in JEV infection and the mechanisms through which the virus exploits mosquito defensin for infection and transmission. IMPORTANCE In this study, we observed the complex roles of mosquito defensin in JEV infection; mosquito defensin exhibited a weak antiviral effect but strongly enhanced binding. In the latter, defensin directly binds the ED III domain of the viral E protein and promotes the adsorption of JEV to target cells by interacting with lipoprotein receptor-related protein 2 (LRP2), thus accelerating virus entry. Together, our results indicate that mosquito defensin plays an important role in facilitating JEV infection and potential transmission., (Copyright © 2020 American Society for Microbiology.)
- Published
- 2020
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