34 results on '"Wilschut, Rutger A."'
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2. Species-specific predation determines the feeding impacts of six soil protist species on bacterial and eukaryotic prey
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Berlinches de Gea, Alejandro, Geisen, Stefan, Grootjans, Franka, Wilschut, Rutger A., and Schwelm, Arne
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- 2024
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3. Belowground plant inputs exert higher metabolic activities and carbon use efficiency of soil nematodes than aboveground inputs
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Zhang, Zhiyong, Wang, Han, Ding, Fan, Wilschut, Rutger A., Jia, Zhaojie, Zhang, Xiaoke, Zhang, Di, Rasmann, Sergio, Sánchez-Moreno, Sara, and Li, Bingxue
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- 2022
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4. Number of simultaneously acting global change factors affects composition, diversity and productivity of grassland plant communities
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Speißer, Benedikt, Wilschut, Rutger A., and van Kleunen, Mark
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- 2022
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5. Plant population and soil origin effects on rhizosphere nematode community composition of a range-expanding plant species and a native congener
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Wilschut, Rutger A., Magnée, Kim J. H., Geisen, S., van der Putten, W. H., and Kostenko, O.
- Published
- 2020
6. Plant–Soil Feedbacks and Temporal Dynamics of Plant Diversity–Productivity Relationships
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Thakur, Madhav P., van der Putten, Wim H., Wilschut, Rutger A., Veen, G.F. (Ciska), Kardol, Paul, van Ruijven, Jasper, Allan, Eric, Roscher, Christiane, van Kleunen, Mark, and Bezemer, T. Martijn
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- 2021
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7. Disentangling nematode and arbuscular mycorrhizal fungal community effect on the growth of range-expanding Centaurea stoebe in original and new range soil
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Koorem, Kadri, Wilschut, Rutger A., Weser, Carolin, and van der Putten, Wim H.
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- 2021
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8. Drought alters plant‐soil feedback effects on biomass allocation but not on plant performance
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Wilschut, Rutger A. and van Kleunen, Mark
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- 2021
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9. LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species
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Kulkarni, Purva, Wilschut, Rutger A., Verhoeven, Koen J. F., van der Putten, Wim H., and Garbeva, Paolina
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- 2018
10. Soil nematode abundance and functional group composition at a global scale
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van den Hoogen, Johan, Geisen, Stefan, Routh, Devin, Ferris, Howard, Traunspurger, Walter, Wardle, David A., de Goede, Ron G. M., Adams, Byron J., Ahmad, Wasim, Andriuzzi, Walter S., Bardgett, Richard D., Bonkowski, Michael, Campos-Herrera, Raquel, Cares, Juvenil E., Caruso, Tancredi, de Brito Caixeta, Larissa, Chen, Xiaoyun, Costa, Sofia R., Creamer, Rachel, Mauro da Cunha Castro, José, Dam, Marie, Djigal, Djibril, Escuer, Miguel, Griffiths, Bryan S., Gutiérrez, Carmen, Hohberg, Karin, Kalinkina, Daria, Kardol, Paul, Kergunteuil, Alan, Korthals, Gerard, Krashevska, Valentyna, Kudrin, Alexey A., Li, Qi, Liang, Wenju, Magilton, Matthew, Marais, Mariette, Martín, José Antonio Rodríguez, Matveeva, Elizaveta, Mayad, El Hassan, Mulder, Christian, Mullin, Peter, Neilson, Roy, Nguyen, T. A. Duong, Nielsen, Uffe N., Okada, Hiroaki, Rius, Juan Emilio Palomares, Pan, Kaiwen, Peneva, Vlada, Pellissier, Loïc, Carlos Pereira da Silva, Julio, Pitteloud, Camille, Powers, Thomas O., Powers, Kirsten, Quist, Casper W., Rasmann, Sergio, Moreno, Sara Sánchez, Scheu, Stefan, Setälä, Heikki, Sushchuk, Anna, Tiunov, Alexei V., Trap, Jean, van der Putten, Wim, Vestergård, Mette, Villenave, Cecile, Waeyenberge, Lieven, Wall, Diana H., Wilschut, Rutger, Wright, Daniel G., Yang, Jiue-in, and Crowther, Thomas Ward
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- 2019
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11. Range-expansion effects on the belowground plant microbiome
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Ramirez, Kelly S., Snoek, L. Basten, Koorem, Kadri, Geisen, Stefan, Bloem, L. Janneke, ten Hooven, Freddy, Kostenko, Olga, Krigas, Nikos, Manrubia, Marta, Caković, Danka, van Raaij, Debbie, Tsiafouli, Maria A., Vreš, Branko, Čelik, Tatjana, Weser, Carolin, Wilschut, Rutger A., and van der Putten, Wim H.
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- 2019
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12. A global database of soil nematode abundance and functional group composition
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van den Hoogen, Johan, Geisen, Stefan, Wall, Diana H., Wardle, David A., Traunspurger, Walter, de Goede, Ron G. M., Adams, Byron J., Ahmad, Wasim, Ferris, Howard, Bardgett, Richard D., Bonkowski, Michael, Campos-Herrera, Raquel, Cares, Juvenil E., Caruso, Tancredi, de Brito Caixeta, Larissa, Chen, Xiaoyun, Costa, Sofia R., Creamer, Rachel, da Cunha e Castro, José Mauro, Dam, Marie, Djigal, Djibril, Escuer, Miguel, Griffiths, Bryan S., Gutiérrez, Carmen, Hohberg, Karin, Kalinkina, Daria, Kardol, Paul, Kergunteuil, Alan, Korthals, Gerard, Krashevska, Valentyna, Kudrin, Alexey A., Li, Qi, Liang, Wenju, Magilton, Matthew, Marais, Mariette, Martín, José Antonio Rodríguez, Matveeva, Elizaveta, Mayad, El Hassan, Mzough, E., Mulder, Christian, Mullin, Peter, Neilson, Roy, Nguyen, T. A. Duong, Nielsen, Uffe N., Okada, Hiroaki, Rius, Juan Emilio Palomares, Pan, Kaiwen, Peneva, Vlada, Pellissier, Loïc, da Silva, Julio Carlos Pereira, Pitteloud, Camille, Powers, Thomas O., Powers, Kirsten, Quist, Casper W., Rasmann, Sergio, Moreno, Sara Sánchez, Scheu, Stefan, Setälä, Heikki, Sushchuk, Anna, Tiunov, Alexei V., Trap, Jean, Vestergård, Mette, Villenave, Cecile, Waeyenberge, Lieven, Wilschut, Rutger A., Wright, Daniel G., Keith, Aidan M., Yang, Jiue-in, Schmidt, Olaf, Bouharroud, R., Ferji, Z., van der Putten, Wim H., Routh, Devin, and Crowther, Thomas W.
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- 2020
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13. Microbiome predators in changing soils.
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Hu, Shunran, Li, Guixin, Berlinches de Gea, Alejandro, Teunissen, Joliese, Geisen, Stefan, Wilschut, Rutger A., Schwelm, Arne, and Wang, Yuxin
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PREDATORY animals ,SOILS ,AGRICULTURE ,PLANT growth - Abstract
Microbiome predators shape the soil microbiome and thereby soil functions. However, this knowledge has been obtained from small‐scale observations in fundamental rather than applied settings and has focused on a few species under ambient conditions. Therefore, there are several unaddressed questions on soil microbiome predators: (1) What is the role of microbiome predators in soil functioning? (2) How does global change affect microbiome predators and their functions? (3) How can microbiome predators be applied in agriculture? We show that there is sufficient evidence for the vital role of microbiome predators in soils and stress that global changes impact their functions, something that urgently needs to be addressed to better understand soil functioning as a whole. We are convinced that there is a potential for the application of microbiome predators in agricultural settings, as they may help to sustainably increase plant growth. Therefore, we plea for more applied research on microbiome predators. [ABSTRACT FROM AUTHOR]
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- 2023
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14. Leaf litter presence in the non‐growing season prolongs plant legacy effects on soil fungal communities and succeeding plant growth
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He, Yifan, Jia, Bingbing, Wei, Chunqiang, Fan, Fengyan, Wilschut, Rutger A., and Lu, Xinmin
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Life Science - Abstract
Soil microbes can profoundly affect species coexistence and alien plant invasion via plant–soil feedbacks (PSFs). Theoretically, plants can modify soil biotic communities (e.g. fungal and bacterial communities) sequentially via rhizo-inputs in the growing season and via litter decomposition in the non-growing season, and in this way affect the performance of plant individuals that establish in the same soil in the following growing season. However, how plants affect soil microbes via sequential rhizosphere and litter inputs and how these soil microbial legacies feedback to subsequent plants remains unclear.Here, we first explored the sequential effects of living individuals and their leaf litter on soil fungal communities, using 42 common alien and native species in China, and then estimated their PSF effects on three common test species.Our results show that living plants growing in field soil developed distinct rhizosphere fungal communities within one season. After the removal of conditioning plants, the fungal communities in these conditioned soils changed more dramatically in the absence than in the presence of leaf litter, suggesting that leaf litter inputs prolonged the species-specific legacies that conspecific living individuals exerted in the soil. Moreover, leaf litter induced general negative effects on all test species in the second growing season. Conditioning plant origin (native vs. alien) and life cycle (annual vs. perennial), respectively, had a slight or no impact on fungal community composition, and conditioning plant origin did not affect PSF responses of the test species.Synthesis: These findings show that leaf litter prolongs soil fungal legacies of conspecific living individuals, which can lead to carryover effects on heterospecific plant growth in the next season. Our findings highlight the importance of leaf litter for plant–soil interactions and thereby stress the potential importance of plant litter as a driver of plant community dynamics.
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- 2023
15. Nematode biomass changes along an elevational gradient are trophic group dependent but independent of body size
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Li, Guixin, Wilschut, Rutger A., Luo, Shuaiwei, Chen, Han, Wang, Xiangtai, Du, Guozhen, and Geisen, Stefan
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Life Science ,Laboratory of Nematology ,PE&RC ,Laboratorium voor Nematologie - Abstract
Aboveground, large and higher trophic-level organisms often respond more strongly to environmental changes than small and lower trophic-level organisms. However, whether this trophic or size-dependent sensitivity also applies to the most abundant animals, microscopic soil-borne nematodes, remains largely unknown. Here, we sampled an altitudinal transect across the Tibetan Plateau and applied a community-weighted mean (CWM) approach to test how differences in climatic and edaphic properties affect nematode CWM biomass at the level of community, trophic group and taxon mean biomass within trophic groups. We found that climatic and edaphic properties, particularly soil water-related properties, positively affected nematode CWM biomass, with no overall impact of altitude on nematode CWM biomass. Higher trophic-level omnivorous and predatory nematodes responded more strongly to climatic and edaphic properties, particularly to temperature, soil pH, and soil water content than lower trophic-level bacterivorous and fungivorous nematodes. However, these differences were likely not (only) driven by size, as we did not observe significant interactions between climatic and edaphic properties and mean biomasses within trophic groups. Together, our research implies a stronger, size-independent trophic sensitivity of higher trophic-level nematodes compared with lower trophic-level ones. Therefore, our findings provide new insights into the mechanisms underlying nematode body size structure in alpine grasslands and highlight that traits independent of size need to be found to explain increased sensitivity of higher trophic-level nematodes to climatic and edaphic properties, which might affect soil functioning.
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- 2023
16. Root traits and belowground herbivores relate to plant–soil feedback variation among congeners
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Wilschut, Rutger A., van der Putten, Wim H., Garbeva, Paolina, Harkes, Paula, Konings, Wouter, Kulkarni, Purva, Martens, Henk, and Geisen, Stefan
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- 2019
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17. Editorial: Drivers of host-microbiome interactions in the rhizosphere.
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Topalović, Olivera, Koorem, Kadri, and Wilschut, Rutger A.
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RHIZOSPHERE ,SUSTAINABLE agriculture ,PLANT protection ,CROPS - Published
- 2023
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18. Combined effects of warming and drought on plant biomass depend on plant woodiness and community type: a meta-analysis
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Wilschut, Rutger A, De Long, Jonathan R, Geisen, Stefan, Hannula, S Emilia, Quist, Casper W, Snoek, Basten, Steinauer, Katja, Wubs, E R Jasper, Yang, Qiang, Thakur, Madhav P, Sub Bioinformatics, Theoretical Biology and Bioinformatics, Sub Bioinformatics, Theoretical Biology and Bioinformatics, and Terrestrial Ecology (TE)
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Climate Change ,aboveground plant biomass ,000 Computer science, knowledge & systems ,Biochemistry ,General Biochemistry, Genetics and Molecular Biology ,climate warming ,Environmental Science(all) ,Immunology and Microbiology(all) ,ddc:570 ,Life Science ,Biomass ,precipitation increase ,global change experiments ,Laboratorium voor Nematologie ,Ecosystem ,General Environmental Science ,General Immunology and Microbiology ,Agricultural and Biological Sciences(all) ,Biochemistry, Genetics and Molecular Biology(all) ,General Medicine ,Plants ,belowground plant biomass ,PE&RC ,Biosystematiek ,Droughts ,precipitation decrease ,Biosystematics ,570 Life sciences ,biology ,Laboratory of Nematology ,General Agricultural and Biological Sciences ,Genetics and Molecular Biology(all) - Abstract
Global warming and precipitation extremes (drought or increased precipitation) strongly affect plant primary production and thereby terrestrial ecosystem functioning. Recent syntheses show that combined effects of warming and precipitation extremes on plant biomass are generally additive, while individual experiments often show interactive effects, indicating that combined effects are more negative or positive than expected based on the effects of single factors. Here, we examined whether variation in biomass responses to single and combined effects of warming and precipitation extremes can be explained by plant growth form and community type. We performed a meta-analysis of 37 studies, which experimentally crossed warming and precipitation treatments, to test whether biomass responses to combined effects of warming and precipitation extremes depended on plant woodiness and community type (monocultures versus mixtures). Our results confirmed that the effects of warming and precipitation extremes were overall additive. However, combined effects of warming and drought on above- and belowground biomass were less negative in woody- than in herbaceous plant systems and more negative in plant mixtures than in monocultures. We further show that drought effects on plant biomass were more negative in greenhouse- than in field studies, suggesting that greenhouse experiments may overstate drought effects in the field. Our results highlight the importance of plant system characteristics to better understand plant responses to climate change.
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- 2022
19. Aboveground herbivory can promote exotic plant invasion through intra‐ and interspecific aboveground–belowground interactions.
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Gao, Lunlun, Wei, Chunqiang, He, Yifan, Tang, Xuefei, Chen, Wei, Xu, Hao, Wu, Yuqing, Wilschut, Rutger A., and Lu, Xinmin
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PLANT invasions ,INTRODUCED plants ,INVASIVE plants ,BIOLOGICAL pest control agents ,SOIL microbial ecology ,MICROBIAL communities ,PLANT competition - Abstract
Summary: Aboveground herbivores and soil biota profoundly affect plant invasions. However, how they interactively affect plant invasions through plant–soil feedbacks (PSFs) remains unclear.To explore how herbivory by the introduced beetle Agasicles hygrophila affects Alternanthera philoxeroides invasions in China, we integrated multiyear field surveys and a 2‐yr PSF experiment, in which we examined how herbivory affects PSFs on the performance of native and invasive plants and the introduced beetles.Despite increased herbivory from A. hygrophila, A. philoxeroides dominance over co‐occurring congeneric native Alternanthera sessilis remained constant from 2014 to 2019. While occurring at lower abundances, A. sessilis experienced similar herbivore damage, suggesting apparent competitive effects. Our experiments revealed that herbivory on A. philoxeroides altered soil microbial communities, prolonged its negative PSF on A. sessilis, and decreased A. hygrophila larvae performance on the next‐generation invasive plants. Consequently, A. hygrophila larvae performed better on leaves of natives than those of invasives when grown in soils conditioned by invasive plants defoliated by the introduced beetles.Our findings suggest that aboveground herbivory might promote rather than suppress A. philoxeroides invasion by enhancing its soil‐mediated self‐reinforcement, providing a novel mechanistic understanding of plant invasions. These findings highlight the need to incorporate an aboveground–belowground perspective during the assessment of potential biocontrol agents. See also the Commentary on this article by Antunes, 237: 1941–1942. [ABSTRACT FROM AUTHOR]
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- 2023
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20. Community-level interactions between plants and soil biota during range expansion
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Koorem, Kadri, Snoek, Basten L., Bloem, Janneke, Geisen, Stefan, Kostenko, Olga, Manrubia, Marta, Ramirez, Kelly S., Weser, Carolin, Wilschut, Rutger A., van der Putten, Wim H., Sub Bioinformatics, Theoretical Biology and Bioinformatics, Sub Bioinformatics, Theoretical Biology and Bioinformatics, and Terrestrial Ecology (TE)
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0106 biological sciences ,Range (biology) ,Soil biology ,Climate change ,plant–plant interactions ,Plant Science ,plant–soil interactions ,Biology ,010603 evolutionary biology ,01 natural sciences ,complex mixtures ,Plant–Soil (Below‐ground) Interactions ,NIOO ,ddc:570 ,Laboratory of Entomology ,bacteria ,Laboratorium voor Nematologie ,Ecology, Evolution, Behavior and Systematics ,Biomass (ecology) ,Community level ,Ecology ,Plan_S-Compliant-TA ,fungi ,food and beverages ,Plant community ,Native plant ,PE&RC ,Laboratorium voor Entomologie ,climate change ,Soil water ,nematodes ,EPS ,Laboratory of Nematology ,010606 plant biology & botany ,Research Article - Abstract
Plant species that expand their range in response to current climate change will encounter soil communities that may hinder, allow or even facilitate plant performance. It has been shown repeatedly for plant species originating from other continents that these plants are less hampered by soil communities from the new than from the original range. However, information about the interactions between intra‐continental range expanders and soil communities is sparse, especially at community level.Here we used a plant–soil feedback experiment approach to examine if the interactions between range expanders and soil communities change during range expansion. We grew communities of range‐expanding and native plant species with soil communities originating from the original and new range of range expanders. In these conditioned soils, we determined the composition of fungi and bacteria by high‐throughput amplicon sequencing of the ITS region and the 16S rRNA gene respectively. Nematode community composition was determined by microscopy‐based morphological identification. Then we tested how these soil communities influence the growth of subsequent communities of range expanders and natives.We found that after the conditioning phase soil bacterial, fungal and nematode communities differed by origin and by conditioning plant communities. Despite differences in bacterial, fungal and nematode communities between original and new range, soil origin did not influence the biomass production of plant communities. Both native and range expanding plant communities produced most above‐ground biomass in soils that were conditioned by plant communities distantly related to them. Synthesis. Communities of range‐expanding plant species shape specific soil communities in both original and new range soil. Plant–soil interactions of range expanders in communities can be similar to the ones of their closely related native plant species., Communities of range‐expanding plant species shape specific soil communities in both original and new range soil. Plant–soil interactions of range expanders in communities can be similar to the ones of their closely related native plant species.
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- 2020
21. Latitudinal variation in soil nematode communities under climate warming-related range-expanding and native plants
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Wilschut, Rutger A, Geisen, Stefan, Martens, Henk, Kostenko, Olga, de Hollander, Mattias, Ten Hooven, Freddy, Weser, Carolin, Snoek, L Basten, Bloem, Janneke, Caković, Danka, Čelik, Tatjana, Koorem, Kadri, Krigas, Nikos, Manrubia, Marta, Ramirez, Kelly S, Tsiafouli, Maria A, Vreš, Branko, van der Putten, Wim H, Sub Bioinformatics, Theoretical Biology and Bioinformatics, Terrestrial Ecology (TE), Sub Bioinformatics, and Theoretical Biology and Bioinformatics
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0106 biological sciences ,Bacterivore ,010504 meteorology & atmospheric sciences ,Nematoda ,Range (biology) ,root‐feeding nematodes ,Introduced species ,Biology ,range-expanding plant species ,010603 evolutionary biology ,01 natural sciences ,Soil ,enemy release hypothesis ,plant-pathogenic nematodes ,Environmental Chemistry ,Animals ,range‐expanding plant species ,Primary Research Article ,plant‐pathogenic nematodes ,Laboratory of Entomology ,range expansion ,Laboratorium voor Nematologie ,root-feeding nematodes ,0105 earth and related environmental sciences ,General Environmental Science ,Global and Planetary Change ,Herbivore ,Ecology ,Centaurea stoebe ,Biota ,CBLB Bodembiologie ,Native plant ,Plants ,Primary Research Articles ,PE&RC ,Laboratorium voor Entomologie ,Europe ,international ,Rhizosphere ,Biological dispersal ,Species richness ,EPS ,Laboratory of Nematology - Abstract
Current climate change has led to latitudinal and altitudinal range expansions of numerous species. During such range expansions, plant species are expected to experience changes in interactions with other organisms, especially with belowground biota that have a limited dispersal capacity. Nematodes form a key component of the belowground food web as they include bacterivores, fungivores, omnivores and root herbivores. However, their community composition under climate change-driven intracontinental range-expanding plants has been studied almost exclusively under controlled conditions, whereas little is known about actual patterns in the field. Here, we use novel molecular sequencing techniques combined with morphological quantification in order to examine nematode communities in the rhizospheres of four range-expanding and four congeneric native species along a 2000 km latitudinal transect from South-Eastern to North-Western Europe. We tested the hypotheses that latitudinal shifts in nematode community composition are stronger in range-expanding plant species than in congeneric natives and that in their new range, range-expanding plant species accumulate fewest root-feeding nematodes. Our results show latitudinal variation in nematode community composition of both range expanders and native plant species, while OTU richness remained the same across ranges. Therefore, range-expanding plant species face different nematode communities at higher latitudes, but this is also the case for widespread native plant species. Only one of the four range-expanding plant species showed a stronger shift in nematode community composition than its congeneric native, and accumulated fewer root-feeding nematodes in its new range. We conclude that variation in nematode community composition with increasing latitude occurs for both range-expanding and native plant species and that some range-expanding plant species may become released from root-feeding nematodes in the new range. This article is protected by copyright. All rights reserved.
- Published
- 2019
22. Contrasting responses of naturalized alien and native plants to native soil biota and drought.
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Ruppert, Hannah K., Kleunen, Mark, and Wilschut, Rutger A.
- Abstract
Terrestrial plant communities often become invaded by alien species, which may benefit from high growth rates, strong phenotypic plasticity and reduced negative impacts from local soil communities. At the same time, terrestrial communities are increasingly more often exposed to periods of drought. However, how drought affects the competition between alien and native plants directly, and indirectly, through changing impacts of soil communities on plant performance, remains poorly understood. Here, we performed a greenhouse pot experiment in which we examined biomass responses of five native and five naturalized alien species (all occurring in mesic grasslands) to drought and benign soil moisture conditions, while growing in interspecific, intraspecific or absence of competition, in the presence or absence of native soil biota. We expected that alien plant species are less negatively affected by soil biota, but more negatively affected by drought than native species, and that drought indirectly weakens soil‐community‐driven competitive benefits of alien plant species over native ones. On average, soil‐community effects on plant biomass were positive, but native performance was less positively affected by soil communities than alien performance, suggesting reduced impacts of soil‐borne enemies on alien plants. Drought more negatively affected alien‐ than native plant performance. Drought impacts on plant biomass did not depend on soil community presence, but in the presence of soil biota, plants overall invested more in root biomass when exposed to drought. The effects of competition were subtle and species‐specific. To better understand the observed positive soil‐community effects on plant performance in our study, we examined mycorrhizal root colonization of plants grown in absence of competition. Among‐species variation in mycorrhizal colonization explained plant performance differences between soils with and without live soil communities, indicating a key role for arbuscular mycorrhizal fungi as driver of plant performance. However, mycorrhizal colonization did not differ between alien and native plants and was unaffected by drought. Overall, our study suggests that drought may weaken alien plant invasions through stronger direct negative impacts on alien than on native plant performance, but that drought does not affect soil‐biota‐driven differences in plant performance between alien and native plants. Read the free Plain Language Summary for this article on the Journal blog. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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23. Range-expanding plant species and their belowground neighbours : digging into novel interactions
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Wilschut, Rutger Arie, Wageningen University, and W.H. van der Putten
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fungi ,Life Science ,food and beverages ,Laboratory of Nematology ,PE&RC ,Laboratorium voor Nematologie - Abstract
In this thesis I studied plant-soil interactions of range-expanding plant species: plants that have expanded their range northward due to recent climate change. The interactions of these plant species with associated belowground organisms are predicted to change along their range expansion trajectory, as belowground organisms have limited dispersal capabilities. I show that nematode communities under range-expanding plant species indeed change along a latitudinal transect across Europe, but that range-expanding plant species only rarely experience less herbivory from nematodes in their new range compared to their original range. Greenhouse studies showed that in the new range, the direct and indirect interactions of range-expanding plant species with root-feeding nematodes differ from similar interactions of native plant species, but that the outcomes of such interactions are highly species-specific. The level of dissimilarity in root chemistry between range-expanding plant and related native plant species may determine the responses of native nematodes to range-expanding plant species in their new range. I also show that phylogenetic distance is not a good predictor of variation in plant-soil interactions among native and range-expanding plant species. Overall, my thesis shows that interactions of range-expanding plant species with soil organisms in their new range are species-specific, and that the impact of range-expanding plant species on communities in their new range cannot be easily predicted.
- Published
- 2018
24. Nematodes as Drivers of Plant Performance in Natural Systems.
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Wilschut, Rutger A. and Geisen, Stefan
- Subjects
- *
PLANT performance , *SOIL nematodes , *SPECIES specificity , *NEMATODES , *VEGETATION dynamics , *SOIL biodiversity , *PLANT nematodes , *NUTRIENT cycles - Abstract
Nematodes form an important part of soil biodiversity as the most abundant and functionally diverse animals affecting plant performance. Most studies on plant–nematode interactions are focused on agriculture, while plant–nematode interactions in nature are less known. Here we highlight that nematodes can contribute to vegetation dynamics through direct negative effects on plants, and indirect positive effects through top–down predation on plant-associated organisms. Global change alters these interactions, of which better understanding is rapidly needed to better predict functional consequences. By expanding the knowledge of plant–nematode interactions in natural systems, an increase in basic understanding of key ecological topics such as plant–soil interactions and plant invasion dynamics will be obtained, while also increasing the insights and potential biotic repertoire to be applicable in sustainable plant management. The impact of soil nematodes -the most abundant animals on Earth- on plant performance have mostly been studied in agricultural systems and are only partly understood in natural systems. There is accumulating evidence that nematodes affect natural plant performance by contributing to negative plant–soil feedbacks, altering rhizosphere microbial communities and enhancing nutrient cycling. Molecular methods will further increase this understanding, especially by elucidating species specificity and underlying molecular mechanisms of plant–nematode interactions. Increased knowledge is needed to understand how changes in nematode community structure, which are imposed by several global change drivers, feed back to plant performance and plant community composition. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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25. Nematode community responses to range‐expanding and native plant communities in original and new range soils.
- Author
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Wilschut, Rutger A., Kostenko, Olga, Koorem, Kadri, and Van Der Putten, Wim H.
- Subjects
- *
NEMATODES , *NATIVE plants , *CLIMATE change , *PLANT-pathogen relationships , *SOIL science - Abstract
Many plant species expand their range to higher latitudes in response to climate change. However, it is poorly understood how biotic interactions in the new range differ from interactions in the original range. Here, in a mesocosm experiment, we analyze nematode community responses in original and new range soils to plant communities with either (a) species native in both the original and new range, (b) range‐expanding species related to these natives (related range expanders), or (c) range expanders without native congeneric species in the new range (unrelated range expanders). We hypothesized that nematode community shifts between ranges are strongest for unrelated range expanders and minimal for plant species that are native in both ranges. As a part of these community shifts, we hypothesized that range expanders, but not natives, would accumulate fewer root‐feeding nematodes in their new range compared to their original range. Analyses of responses of nematodes from both original and new ranges and comparison between range expanders with and without close relatives have not been made before. Our study reveals that none of the plant communities experienced evident nematode community shifts between the original and new range. However, in soils from the new range, root‐feeding nematode communities of natives and related range expanders were more similar than in soils from the original range, whereas the nematode community of unrelated range expanders was distinct from the communities of natives and related range expanders in soils from both ranges. The abundances of root‐feeding nematodes were comparable between the original and new range for all plant communities. Unexpectedly, unrelated range expanders overall accumulated most root‐feeding nematodes, whereas related range expanders accumulated fewest. We conclude that nematode communities associated with native and range‐expanding plant species differ between the original and the new range, but that range‐expanding plant species do not accumulate fewer root‐feeding nematodes in their new than in their original range. We tested whether communities of climate change‐driven range‐expanding plant species accumulate different communities of nematodes in soils from their new range compared to soils from their original range. We examined plant communities that either consisted of range expanders with or range expanders without relatives in the native community, and the nematode responses to these native relatives were also examined. We did not find clear shifts in nematode community composition between original and new range soils, but found distinct responses to plant community type. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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26. Relatedness with plant species in native community influences ecological consequences of range expansions.
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Koorem, Kadri, Kostenko, Olga, Snoek, L. Basten, Weser, Carolin, Ramirez, Kelly S., Wilschut, Rutger A., and van der Putten, Wim H.
- Subjects
CLIMATE change ,EFFECT of global warming on plants ,PLANT species ,PLANT phylogeny ,PLANT-soil relationships - Abstract
Global warming is enabling many plant species to expand their range to higher latitudes and altitudes, where they may suffer less from natural aboveground and belowground enemies. Reduced control by natural enemies can enable climate warming‐induced range expanders to gain an advantage in competition with natives and become disproportionally abundant in their new range. However, so far studies have only examined individual growth of range expanders, which have common congeneric plant species in their new range. Thus it is not known how general is this reduced effect of above‐ and belowground enemies and how it operates in communities, where multiple plant species also interact with each other. Here we show that range‐expanding plant species with and without congenerics in the invaded habitats differ in their ecological interactions in the new range. In a community‐level experiment, range‐expanding plant species, both with and without congenerics, suppressed the growth of a herbivore. However, only range expanders without congenerics reduced biomass production of the native plant species. In the present study, range expanders without congenerics allocated more biomass aboveground compared to native plant species, which can explain their competitive advantage. Competitive interaction and also biomass allocation of native plants and their congeneric range expanders were similar. Our results highlight that information about species phylogenetic relatedness with native flora can be crucial for improving predictions about the consequences of climate warming‐induced range expansions. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
27. Rapid evolution of phenology during range expansion with recent climate change.
- Author
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Lustenhouwer, Nicky, Wilschut, Rutger A., Williams, Jennifer L., van der Putten, Wim H., and Levine, Jonathan M.
- Subjects
- *
PLANT phenology , *CLIMATE change , *PLANT habitats , *PLANT migration , *PLANT adaptation , *ABIOTIC environment , *PLANT colonization - Abstract
Abstract: Although climate warming is expected to make habitat beyond species’ current cold range edge suitable for future colonization, this new habitat may present an array of biotic or abiotic conditions not experienced within the current range. Species’ ability to shift their range with climate change may therefore depend on how populations evolve in response to such novel environmental conditions. However, due to the recent nature of thus far observed range expansions, the role of rapid adaptation during climate change migration is only beginning to be understood. Here, we evaluated evolution during the recent native range expansion of the annual plant
Dittrichia graveolens , which is spreading northward in Europe from the Mediterranean region. We examined genetically based differentiation between core and edge populations in their phenology, a trait that is likely under selection with shorter growing seasons and greater seasonality at northern latitudes. In parallel common garden experiments at range edges in Switzerland and the Netherlands, we grew plants from Dutch, Swiss, and central and southern French populations. Population genetic analysis following RAD‐sequencing of these populations supported the hypothesized central France origins of the Swiss and Dutch range edge populations. We found that in both common gardens, northern plants flowered up to 4 weeks earlier than southern plants. This differentiation in phenology extended from the core of the range to the Netherlands, a region only reached from central France over approximately the last 50 years. Fitness decreased as plants flowered later, supporting the hypothesized benefits of earlier flowering at the range edge. Our results suggest that native range expanding populations can rapidly adapt to novel environmental conditions in the expanded range, potentially promoting their ability to spread. [ABSTRACT FROM AUTHOR]- Published
- 2018
- Full Text
- View/download PDF
28. Belowground Plant--Herbivore Interactions Vary among Climate-Driven Range-Expanding Plant Species with Different Degrees of Novel Chemistry.
- Author
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Wilschut, Rutger A., Silva, Julio C. P., Garbeva, Paolina, and van der Putten, Wim H.
- Subjects
HERBIVORES ,PLANT nematodes ,PLANT roots - Abstract
An increasing number of studies report plant range expansions to higher latitudes and altitudes in response to global warming. However, consequences for interactions with other species in the novel ranges are poorly understood. Here, we examine how range-expanding plant species interact with root-feeding nematodes from the new range. Root-feeding nematodes are ubiquitous belowground herbivores that may impact the structure and composition of natural vegetation. Because of their ecological novelty, we hypothesized that range-expanding plant species will be less suitable hosts for root-feeding nematodes than native congeneric plant species. In greenhouse and lab trials we compared nematode preference and performance of two root-feeding nematode species between range-expanding plant species and their congeneric natives. In order to understand differences in nematode preferences, we compared root volatile profiles of all range-expanders and congeneric natives. Nematode preferences and performances differed substantially among the pairs of range-expanders and natives. The range-expander that had the most unique volatile profile compared to its related native was unattractive and a poor host for nematodes. Other range-expanding plant species that differed less in root chemistry from native congeners, also differed less in nematode attraction and performance. We conclude that the three climate-driven range-expanding plant species studied varied considerably in their chemical novelty compared to their congeneric natives, and therefore affected native root-feeding nematodes in species-specific ways. Our data suggest that through variation in chemical novelty, range-expanding plant species may vary in their impacts on belowground herbivores in the new range. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
29. Natural epigenetic variation contributes to heritable flowering divergence in a widespread asexual dandelion lineage.
- Author
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Wilschut, Rutger A., Oplaat, Carla, Snoek, L. Basten, Kirschner, Jan, and Verhoeven, Koen J. F.
- Subjects
- *
DANDELIONS , *EPIGENETICS , *PHENOTYPES , *GENOTYPES , *ENTEROTYPES - Abstract
Epigenetic variation has been proposed to contribute to the success of asexual plants, either as a contributor to phenotypic plasticity or by enabling transient adaptation via selection on transgenerationally stable, but reversible, epialleles. While recent studies in experimental plant populations have shown the potential for epigenetic mechanisms to contribute to adaptive phenotypes, it remains unknown whether heritable variation in ecologically relevant traits is at least partially epigenetically determined in natural populations. Here, we tested the hypothesis that DNA methylation variation contributes to heritable differences in flowering time within a single widespread apomictic clonal lineage of the common dandelion ( Taraxacum officinale s. lat.). Apomictic clone members of the same apomictic lineage collected from different field sites showed heritable differences in flowering time, which was correlated with inherited differences in methylation-sensitive AFLP marker profiles. Differences in flowering between apomictic clone members were significantly reduced after in vivo demethylation using the DNA methyltransferase inhibitor zebularine. This synchronization of flowering times suggests that flowering time divergence within an apomictic lineage was mediated by differences in DNA methylation. While the underlying basis of the methylation polymorphism at functional flowering time-affecting loci remains to be demonstrated, our study shows that epigenetic variation contributes to heritable phenotypic divergence in ecologically relevant traits in natural plant populations. This result also suggests that epigenetic mechanisms can facilitate adaptive divergence within genetically uniform asexual lineages. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
30. Belowground plant inputs exert higher metabolic activities and carbon use efficiency of soil nematodes than aboveground inputs
- Author
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Zhiyong Zhang, Han Wang, Fan Ding, Rutger A. Wilschut, Zhaojie Jia, Xiaoke Zhang, Di Zhang, Sergio Rasmann, Sara Sánchez-Moreno, Bingxue Li, National Natural Science Foundation of China, Wilschut, Rutger A., Rasmann, Sergio, Sánchez-Moreno, Sara, Wilschut, Rutger A. [0000-0002-2559-9799], Rasmann, Sergio [0000-0002-3120-6226], and Sánchez-Moreno, Sara [0000-0003-4558-0304]
- Subjects
Aboveground ,Carbon use efficiency ,Soil Science ,Aboveground input ,Belowground input ,Soil carbon cycling ,Nematode metabolic activities - Abstract
9 Pág., Soil nematodes are key components of soil food web and, through their metabolic activities, play a crucial role in soil carbon (C) cycling. Aboveground and belowground plant C inputs can directly, or indirectly via soil microbes, modify nematode abundance and community composition. Aboveground and belowground C inputs differ in chemical composition, amounts, and frequency, so we hypothesized that the two input pathways affect nematode communities differently. To assess the relative contributions of aboveground versus belowground inputs to nematode community composition and activity, we subjected grassland soils to four plant input pathways over two consecutive years: no input, only aboveground input (+A), only belowground input (+B), and both aboveground and belowground inputs (+A + B). Nematode metabolic footprints, as estimates of C used in growth/reproduction and C lost by respiration, and C use efficiency (C used/(C used + C lost)) were calculated. We predicted that soils with belowground inputs, which are more directly linked to the soil biota, and which contain a more labile blend of molecules, would support richer and more complex nematode communities, and also favor a bacterial-driven decomposition channel. Accordingly, we showed that + B soils supported higher nematode numbers than + A soils, and that the bacterial decomposition channel was dominant in + B soils, while the fungal decomposition channel dominated in + A soils. Compared with + A soils, +B input system increased nematode structure footprints (the metabolic footprints of nematodes in upper functional guilds) rather than enrichment footprints (the metabolic footprints of enrichment opportunistic nematodes). Moreover, we observed that, compared to + A soils, +B soils had higher growth and respiration rates of bacterivores, omnivores-predators, and total nematodes. Finally, we found higher C use efficiency values for omnivores-predators and total nematodes in + B than in + A soils. We thus conclude that belowground plant-derived resources, by changing the ratio between fungivores and bacterivores, induce a faster carbon turnover rate, and higher metabolic activity of soil nematodes within soil food web, ultimately spurring richer and more efficient soil food web than aboveground inputs., This research was supported by the National Natural Science Foundation of China (grant numbers 41601258, 41771280).
- Published
- 2022
31. Nematode biomass changes along an elevational gradient are trophic group dependent but independent of body size.
- Author
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Li G, Wilschut RA, Luo S, Chen H, Wang X, Du G, and Geisen S
- Subjects
- Animals, Biomass, Soil, Body Size, Water, Ecosystem, Nematoda
- Abstract
Aboveground, large and higher trophic-level organisms often respond more strongly to environmental changes than small and lower trophic-level organisms. However, whether this trophic or size-dependent sensitivity also applies to the most abundant animals, microscopic soil-borne nematodes, remains largely unknown. Here, we sampled an altitudinal transect across the Tibetan Plateau and applied a community-weighted mean (CWM) approach to test how differences in climatic and edaphic properties affect nematode CWM biomass at the level of community, trophic group and taxon mean biomass within trophic groups. We found that climatic and edaphic properties, particularly soil water-related properties, positively affected nematode CWM biomass, with no overall impact of altitude on nematode CWM biomass. Higher trophic-level omnivorous and predatory nematodes responded more strongly to climatic and edaphic properties, particularly to temperature, soil pH, and soil water content than lower trophic-level bacterivorous and fungivorous nematodes. However, these differences were likely not (only) driven by size, as we did not observe significant interactions between climatic and edaphic properties and mean biomasses within trophic groups. Together, our research implies a stronger, size-independent trophic sensitivity of higher trophic-level nematodes compared with lower trophic-level ones. Therefore, our findings provide new insights into the mechanisms underlying nematode body size structure in alpine grasslands and highlight that traits independent of size need to be found to explain increased sensitivity of higher trophic-level nematodes to climatic and edaphic properties, which might affect soil functioning., (© 2023 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
32. Combined effects of warming and drought on plant biomass depend on plant woodiness and community type: a meta-analysis.
- Author
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Wilschut RA, De Long JR, Geisen S, Hannula SE, Quist CW, Snoek B, Steinauer K, Wubs ERJ, Yang Q, and Thakur MP
- Subjects
- Biomass, Climate Change, Plants, Droughts, Ecosystem
- Abstract
Global warming and precipitation extremes (drought or increased precipitation) strongly affect plant primary production and thereby terrestrial ecosystem functioning. Recent syntheses show that combined effects of warming and precipitation extremes on plant biomass are generally additive, while individual experiments often show interactive effects, indicating that combined effects are more negative or positive than expected based on the effects of single factors. Here, we examined whether variation in biomass responses to single and combined effects of warming and precipitation extremes can be explained by plant growth form and community type. We performed a meta-analysis of 37 studies, which experimentally crossed warming and precipitation treatments, to test whether biomass responses to combined effects of warming and precipitation extremes depended on plant woodiness and community type (monocultures versus mixtures). Our results confirmed that the effects of warming and precipitation extremes were overall additive. However, combined effects of warming and drought on above- and belowground biomass were less negative in woody- than in herbaceous plant systems and more negative in plant mixtures than in monocultures. We further show that drought effects on plant biomass were more negative in greenhouse, than in field studies, suggesting that greenhouse experiments may overstate drought effects in the field. Our results highlight the importance of plant system characteristics to better understand plant responses to climate change.
- Published
- 2022
- Full Text
- View/download PDF
33. Latitudinal variation in soil nematode communities under climate warming-related range-expanding and native plants.
- Author
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Wilschut RA, Geisen S, Martens H, Kostenko O, de Hollander M, Ten Hooven FC, Weser C, Snoek LB, Bloem J, Caković D, Čelik T, Koorem K, Krigas N, Manrubia M, Ramirez KS, Tsiafouli MA, Vreš B, and van der Putten WH
- Subjects
- Animals, Europe, Plants, Rhizosphere, Nematoda, Soil
- Abstract
Current climate change has led to latitudinal and altitudinal range expansions of numerous species. During such range expansions, plant species are expected to experience changes in interactions with other organisms, especially with belowground biota that have a limited dispersal capacity. Nematodes form a key component of the belowground food web as they include bacterivores, fungivores, omnivores and root herbivores. However, their community composition under climate change-driven intracontinental range-expanding plants has been studied almost exclusively under controlled conditions, whereas little is known about actual patterns in the field. Here, we use novel molecular sequencing techniques combined with morphological quantification in order to examine nematode communities in the rhizospheres of four range-expanding and four congeneric native species along a 2,000 km latitudinal transect from South-Eastern to North-Western Europe. We tested the hypotheses that latitudinal shifts in nematode community composition are stronger in range-expanding plant species than in congeneric natives and that in their new range, range-expanding plant species accumulate fewest root-feeding nematodes. Our results show latitudinal variation in nematode community composition of both range expanders and native plant species, while operational taxonomic unit richness remained the same across ranges. Therefore, range-expanding plant species face different nematode communities at higher latitudes, but this is also the case for widespread native plant species. Only one of the four range-expanding plant species showed a stronger shift in nematode community composition than its congeneric native and accumulated fewer root-feeding nematodes in its new range. We conclude that variation in nematode community composition with increasing latitude occurs for both range-expanding and native plant species and that some range-expanding plant species may become released from root-feeding nematodes in the new range., (© 2019 The Authors Global Change Biology Published by John Wiley & Sons Ltd.)
- Published
- 2019
- Full Text
- View/download PDF
34. Parallel diversifications of Cremastosperma and Mosannona (Annonaceae), tropical rainforest trees tracking Neogene upheaval of South America.
- Author
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Pirie MD, Maas PJM, Wilschut RA, Melchers-Sharrott H, and Chatrou LW
- Abstract
Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees ( Cremastosperma , ca 31 spp.; and Mosannona , ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phylogenetically conserved niche differentiation, particularly within Cremastosperma . Niche similarity and recent common ancestry of Amazon and Guianan Mosannona species contrast with dissimilar niches and more distant ancestry of Amazon, Venezuelan and Guianan species of Cremastosperma , suggesting that this element of the similar patterns of disjunct distributions in the two genera is instead a biogeographic parallelism, with differing origins. The results provide further independent evidence for the importance of the Andean orogeny, the drainage of Lake Pebas, and the formation of links between South and Central America in the evolutionary history of Neotropical lowland rainforest trees., Competing Interests: The authors declare that they have no financial or non-financial competing interests.
- Published
- 2018
- Full Text
- View/download PDF
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