21 results on '"Wojciech Barczak"'
Search Results
2. Combination treatment of T1-44, a PRMT5 inhibitor with Vactosertib, an inhibitor of TGF-β signaling, inhibits invasion and prolongs survival in a mouse model of pancreatic tumors
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Eunji Hong, Wojciech Barczak, Sujin Park, Jin Sun Heo, Akira Ooshima, Shonagh Munro, Chang Pyo Hong, Jinah Park, Haein An, Joon Oh Park, Seok Hee Park, Nick B. La Thangue, and Seong-Jin Kim
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Cytology ,QH573-671 - Abstract
Abstract Pancreatic ductal adenocarcinoma (PDAC) is the most lethal type of cancer and the third leading cause of cancer death with the lowest 5-year survival rate. Heterogeneity, difficulty in diagnosis, and rapid metastatic progression are the causes of high mortality in pancreatic cancer. Recent studies have shown that Protein arginine methyltransferase 5 (PRMT5) is overexpressed in pancreatic cancers, and these patients have a worse prognosis. Recently, PRMT5 as an anti-cancer target has gained considerable interest. In this study, we investigated whether inhibition of PRMT5 activity was synergistic with blockade of TGF-β1 signaling, which plays an important role in the construction of the desmoplastic matrix in pancreatic cancer and induces therapeutic vulnerability. Compared with T1-44, a selective inhibitor of PRMT5 activity, the combination of T1-44 with the TGF-β1 signaling inhibitor Vactosertib significantly reduced tumor size and surrounding tissue invasion and significantly improved long-term survival. RNA sequencing analysis of mouse tumors revealed that the combination of T1-44 and Vactosertib significantly altered the expression of genes involved in cancer progression, such as cell migration, extracellular matrix, and apoptotic processes. In particular, the expression of Btg2, known as a tumor suppressor factor in various cancers, was markedly induced by combination treatment. Ectopic overexpression of Btg2 inhibited the EMT response, blocking cell migration, and promoted cancer cell death. These data demonstrate that the combination therapy of T1-44 with Vactosertib is synergistic for pancreatic cancer, suggesting that this novel combination therapy has value in the treatment strategy of patients with pancreatic cancer.
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- 2023
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3. The HDAC inhibitor zabadinostat is a systemic regulator of adaptive immunity
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Geng Liu, Wojciech Barczak, Lian Ni Lee, Amit Shrestha, Nicholas M. Provine, Gulsah Albayrak, Hong Zhu, Claire Hutchings, Paul Klenerman, and Nicholas B. La Thangue
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Biology (General) ,QH301-705.5 - Abstract
The clinical HDAC inhibitor zabadinostat increases MHC class I and II expression in dendritic cells, activates T and B cells, and enhances adaptive immune responses to COVID-19 spike protein in mice.
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- 2023
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4. Immune modulation underpins the anti‐cancer activity of HDAC inhibitors
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Wiktoria Blaszczak, Geng Liu, Hong Zhu, Wojciech Barczak, Amit Shrestha, Gulsah Albayrak, Shunsheng Zheng, David Kerr, Anastasia Samsonova, and Nicholas B. La Thangue
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checkpoints inhibitors ,HDAC inhibitors ,immunotherapy ,tumour microenvironment ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Aberrant protein acetylation is strongly linked to tumorigenesis, and modulating acetylation through targeting histone deacetylase (HDAC) with small‐molecule inhibitors has been the focus of clinical trials. However, clinical success on solid tumours, such as colorectal cancer (CRC), has been limited, in part because the cancer‐relevant mechanisms through which HDAC inhibitors act remain largely unknown. Here, we have explored, at the genome‐wide expression level, the effects of a novel HDAC inhibitor CXD101. In human CRC cell lines, a diverse set of differentially expressed genes were up‐ and downregulated upon CXD101 treatment. Functional profiling of the expression data highlighted immune‐relevant concepts related to antigen processing and natural killer cell‐mediated cytotoxicity. Similar profiles were apparent when gene expression was investigated in murine colon26 CRC cells treated with CXD101. Significantly, these changes were also apparent in syngeneic colon26 tumours growing in vivo. The ability of CXD101 to affect immune‐relevant gene expression coincided with changes in the tumour microenvironment (TME), especially in the subgroups of CD4 and CD8 tumour‐infiltrating T lymphocytes. The altered TME reflected enhanced antitumour activity when CXD101 was combined with immune checkpoint inhibitors (ICIs), such as anti‐PD‐1 and anti‐CTLA4. The ability of CXD101 to reinstate immune‐relevant gene expression in the TME and act together with ICIs provides a powerful rationale for exploring the combination therapy in human cancers.
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- 2021
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5. Tissue and serum microRNA profile of oral squamous cell carcinoma patients
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Augusto Schneider, Berta Victoria, Yury Nunez Lopez, Wiktoria Suchorska, Wojciech Barczak, Agnieszka Sobecka, Wojciech Golusinski, Michal M. Masternak, and Pawel Golusinski
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Medicine ,Science - Abstract
Abstract Head and neck cancer is characterized by malignant tumors arising from the epithelium covering the upper aerodigestive tract, and the majority of these epithelial malignancies are squamous cell carcinomas (SCCs) of the oral cavity (OSCCs). The aim of the current work was to identify miRNAs regulated in OSCC cancerous tissue when compared to a healthy adjacent tissue and to verify the presence of the same miRNAs in the circulation of these patients. For that serum samples and biopsies of healthy and tumor tissues were collected from five patients diagnosed with OSCC of the oral cavity, RNA was extracted from these samples and microRNAs libraries were prepared and sequenced. A total 255 miRNAs were identified in tissue and 381 different miRNAs were identified in serum samples. When comparing the miRNA expression between tumor and healthy tissue we identified 48 miRNAs (25 down- and 23 up-regulated) that were differentially expressed (FDR
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- 2018
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6. Addition of Popular Exogenous Antioxidant Agent, PBN, to Culture Media May Be an Important Step to Optimization of Myogenic Stem/Progenitor Cell Preparation Protocol
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Magdalena Nowaczyk, Agnieszka Malcher, Agnieszka Zimna, Wojciech Łabędź, Łukasz Kubaszewski, Wojciech Barczak, Błażej Rubiś, Natalia Rozwadowska, and Maciej Kurpisz
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α-phenyl-N-tert-butyl nitrone ,heart failure ,skeletal muscle derived stem cells ,apoptosis ,oxidative stress ,post-infarction heart ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The aim of the study was to modify human skeletal muscle-derived stem/progenitor cells (SkMDS/PCs) and demonstrate the optimal cell preparation protocol for application in post-infarction hearts. We used conditioned SkMDS/PC culture medium with α-phenyl-N-tert-butyl nitrone (PBN). SkMDS/PCs were cultured under hypoxic conditions and the results were compared to the standard ones. We observed a significant increase of CD-56 positive phenotypic marker the ability to form functional myotubes, increase in the proportion of young cells in cell primary suspensions, and a decrease in the percentage of apoptotic cells among PBN-conditioned cells in normoxia an hypoxia. We also observed significantly higher levels of SOD3 expression; maintained expression of SOD1, SOD2, and CAT; a higher level of BCL2 gene expression; and a rather significant decrease in Hsp70 gene expression in PBN-conditioned SkMDS/PCs compared to the WT population under hypoxic conditions. In addition, significant increase of myogenic genes expression was observed after PBN addition to culture medium, compared to WT population under hypoxia. Interestingly, PBN addition significantly increased the lengths of telomeres under hypoxia. Based on the data obtained, we can postulate that PBN conditioning of human SkMDS/PCs could be a promising step in improving myogenic cell preparation protocol for pro-regenerative treatment of post-infarction hearts.
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- 2021
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7. hTERT Downregulation Attenuates Resistance to DOX, Impairs FAK-Mediated Adhesion, and Leads to Autophagy Induction in Breast Cancer Cells
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Aleksandra Romaniuk-Drapała, Ewa Totoń, Natalia Konieczna, Marta Machnik, Wojciech Barczak, Dagmar Kowal, Przemysław Kopczyński, Mariusz Kaczmarek, and Błażej Rubiś
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hTERT ,RNAi ,adhesion ,migration ,senescence ,autophagy ,Cytology ,QH573-671 - Abstract
Telomerase is known to contribute to telomere maintenance and to provide cancer cell immortality. However, numerous reports are showing that the function of the enzyme goes far beyond chromosome ends. The study aimed to explore how telomerase downregulation in MCF7 and MDA-MB-231 breast cancer cells affects their ability to survive. Consequently, sensitivity to drug resistance, proliferation, and adhesion were assessed. The lentiviral-mediated human telomerase reverse transcriptase (hTERT) downregulation efficiency was performed at gene expression and protein level using qPCR and Western blot, respectively. Telomerase activity was evaluated using the Telomeric Repeat Amplification Protocol (TRAP) assay. The study revealed that hTERT downregulation led to an increased sensitivity of breast cancer cells to doxorubicin which was demonstrated in MTT and clonogenic assays. During a long-term doubling time assessment, a decreased population doubling level was observed. Interestingly, it did not dramatically affect cell cycle distribution. hTERT downregulation was accompanied by an alteration in β1-integrin- and by focal adhesion kinase (FAK)-driven pathways together with the reduction of target proteins phosphorylation, i.e., paxillin and c-Src. Additionally, autophagy activation was observed in MDA-MB-231 cells manifested by alternations in Atg5, Beclin 1, LC3II/I ratio, and p62. These results provide new evidence supporting the possible therapeutic potential of telomerase downregulation leading to induction of autophagy and cancer cells elimination.
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- 2021
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8. Contribution of Dopamine Transporter Gene Methylation Status to Cannabis Dependency
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Anna Grzywacz, Wojciech Barczak, Jolanta Chmielowiec, Krzysztof Chmielowiec, Aleksandra Suchanecka, Grzegorz Trybek, Jolanta Masiak, Paweł Jagielski, Katarzyna Grocholewicz, and Blazej Rubiś
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dopamine transporter gene ,DAT1 ,cannabis ,epigenetics ,dependency ,CpG sites ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
The susceptibility to cannabis dependency results from the influence of numerous factors such as social, genetic, as well as epigenetic factors. Many studies have attempted to discover a molecular basis for this disease. However, our study aimed at evaluating the connection between altered methylation of the dopamine transporter gene (DAT1) promoter CpG sites and cannabis dependency. In the cases of some DNA sequences, including the DAT1 gene region, their methylation status in blood cells may reflect a systemic modulation in the whole organism. Consequently, we isolated the DNA from the peripheral blood cells from a group of 201 cannabis-dependent patients and 285 controls who were healthy volunteers and who were matched for age and sex. The DNA was subjected to bisulfite conversion and sequencing. Our analysis revealed no statistical differences in the general methylation status of the DAT1 gene promoter CpG island between the patients and controls. Yet, the analysis of individual CpG sites where methylation occurred indicated significant differences. These sites are known to be bound by transcription factors (e.g., SP1, p53, PAX5, or GR), which, apart from other functions, were shown to play a role in the development of the nervous system. Therefore, DAT1 gene promoter methylation studies may provide important insight into the mechanism of cannabis dependency.
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- 2020
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9. Blood Serum From Head and Neck Squamous Cell Carcinoma Patients Induces Altered MicroRNA and Target Gene Expression Profile in Treated Cells
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Brittany Allen, Augusto Schneider, Berta Victoria, Yury O. Nunez Lopez, Mark Muller, Mateusz Szewczyk, Jakub Pazdrowski, Ewa Majchrzak, Wojciech Barczak, Wojciech Golusinski, Pawel Golusinski, and Michal M. Masternak
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head and neck squamous cell carcinomas ,microRNA ,sequencing data analysis ,p53 pathway ,cancer-associated factors ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
The head and neck squamous cell carcinoma (HNSCC) represents one of the most common cancers in humans. Close to 600,000 new diagnoses are made every year worldwide and over half of diagnosed patients will not survive. In view of this low survival rate, the development of novel cell-based assays for HNSCC will allow more mechanistic approaches for specific diagnostics for each individual patient. The cell-based assays will provide more informative data predicting cellular processes in treated patient, which in effect would improve patient follow up. More importantly, it will increase the specificity and effectiveness of therapeutic approaches. In this study, we investigated the role of serum from HNSCC patients on the regulation of microRNA (miRNA) expression in exposed cells in vitro. Next-generation sequencing of miRNA revealed that serum from HNSCC patients induced a different miRNA expression profile than the serum from healthy individuals. Out of 377 miRNA detected, we found that 16 miRNAs were differentially expressed when comparing cells exposed to serum from HNSCC or healthy individuals. The analysis of gene ontologies and pathway analysis revealed that these miRNA target genes were involved in biological cancer-related processes, including cell cycle and apoptosis. The real-time PCR analysis revealed that serum from HNSCC patients downregulate the expression level of five genes involved in carcinogenesis and two of these genes—P53 and SLC2A1—are direct targets of detected miRNAs. These novel findings provide new insight into how cancer-associated factors in circulation regulate the expression of genes and regulatory elements in distal cells in favor of tumorigenesis. This has the potential for new therapeutic approaches and more specific diagnostics with tumor-specific cell lines or single-cell in vitro assays for personalized treatment and early detection of primary tumors or metastasis.
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- 2018
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10. Vitamin C as a Modulator of the Response to Cancer Therapy
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Wiktoria Blaszczak, Wojciech Barczak, Julia Masternak, Przemysław Kopczyński, Anatoly Zhitkovich, and Błażej Rubiś
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vitamin C ,ascorbate ,cancer ,cancer therapy ,chemotherapy ,oxidative stress ,ROS ,hypoxia ,Organic chemistry ,QD241-441 - Abstract
Ascorbic acid (vitamin C) has been gaining attention as a potential treatment for human malignancies. Various experimental studies have shown the ability of pharmacological doses of vitamin C alone or in combinations with clinically used drugs to exert beneficial effects in various models of human cancers. Cytotoxicity of high doses of vitamin C in cancer cells appears to be related to excessive reactive oxygen species generation and the resulting suppression of the energy production via glycolysis. A hallmark of cancer cells is a strongly upregulated aerobic glycolysis, which elevates its relative importance as a source of ATP (Adenosine 5′-triphosphate). Aerobic glycolysis is maintained by a highly increased uptake of glucose, which is made possible by the upregulated expression of its transporters, such as GLUT-1, GLUT-3, and GLUT-4. These proteins can also transport the oxidized form of vitamin C, dehydroascorbate, permitting its preferential uptake by cancer cells with the subsequent depletion of critical cellular reducers as a result of ascorbate formation. Ascorbate also has a potential to affect other aspects of cancer cell metabolism due to its ability to promote reduction of iron(III) to iron(II) in numerous cellular metalloenzymes. Among iron-dependent dioxygenases, important targets for stimulation by vitamin C in cancer include prolyl hydroxylases targeting the hypoxia-inducible factors HIF-1/HIF-2 and histone and DNA demethylases. Altered metabolism of cancer cells by vitamin C can be beneficial by itself and promote activity of specific drugs.
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- 2019
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11. Fucoidan Exerts Anticancer Effects Against Head and Neck Squamous Cell Carcinoma In Vitro
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Wiktoria Blaszczak, Michal Stefan Lach, Wojciech Barczak, and Wiktoria Maria Suchorska
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fucoidan ,head and neck cancer ,marine algae ,complementary therapy ,HNSCC ,Organic chemistry ,QD241-441 - Abstract
Fucoidans have been reported to exert anticancer effects with simultaneous low toxicity against healthy tissue. That correlation was observed in several cancer models, however, it has never been investigated in head and neck cancer before. To magnify the efficacy of conventional therapy, the administration of agents like fucoidan could be beneficial. The aim of this study was to evaluate the anticancer effect of Fucus vesiculosus (FV) extract alone and with co-administration of cisplatin in head and neck squamous cell carcinoma (HNSCC) in vitro. MTT assay results revealed an FV-induced inhibition of proliferation in all tested cell lines (H103, FaDu, KB). Flow cytometric cell cycle analysis showed an FV-induced, dose-dependent arrest in either S/G2 phase (H103, FaDu) or G1 arrest (KB). Furthermore, a dose-dependent gain in apoptotic fraction was observed. Western blot analysis confirmed the induction of apoptosis. A significant dose-dependent increase in reactive oxygen species (ROS) production was revealed in the H103 cell line, while FaDu cells remained unresponsive. On the contrary, an HPV-positive cell line, KB, demonstrated a dose-dependent decrease in ROS synthesis. Moreover, fucoidan enhanced the response to cisplatin (synergistic effect) in all cell lines with the HPV-positive one (KB) being the most sensitive. These results have been confirmed by flow-cytometric apoptosis analysis. In conclusion, we confirmed that fucoidan exhibits anticancer properties against HNSCC, which are manifested by the induction of apoptosis, regulation of ROS production, cell cycle arrest, and inhibition of proliferation.
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- 2018
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12. Immune modulation underpins the anti‐cancer activity of HDAC inhibitors
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Shunsheng Zheng, Amit Shrestha, Wojciech Barczak, Anastasia Samsonova, Hong Zhu, Gulsah Albayrak, Wiktoria Blaszczak, Geng Liu, David J. Kerr, and Nicholas B. La Thangue
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0301 basic medicine ,Cancer Research ,medicine.medical_treatment ,Biology ,Histone Deacetylases ,Mice ,03 medical and health sciences ,0302 clinical medicine ,HDAC inhibitors ,Neoplasms ,Gene expression ,Tumor Microenvironment ,Genetics ,medicine ,Animals ,Humans ,Research Articles ,RC254-282 ,HDAC Inhibitor CXD101 ,Antigen processing ,Cancer ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,checkpoints inhibitors ,General Medicine ,Immunotherapy ,medicine.disease ,Histone Deacetylase Inhibitors ,030104 developmental biology ,Oncology ,Acetylation ,030220 oncology & carcinogenesis ,Cancer research ,Molecular Medicine ,Histone deacetylase ,immunotherapy ,tumour microenvironment ,CD8 ,Research Article - Abstract
Aberrant protein acetylation is strongly linked to tumorigenesis, and modulating acetylation through targeting histone deacetylase (HDAC) with small‐molecule inhibitors has been the focus of clinical trials. However, clinical success on solid tumours, such as colorectal cancer (CRC), has been limited, in part because the cancer‐relevant mechanisms through which HDAC inhibitors act remain largely unknown. Here, we have explored, at the genome‐wide expression level, the effects of a novel HDAC inhibitor CXD101. In human CRC cell lines, a diverse set of differentially expressed genes were up‐ and downregulated upon CXD101 treatment. Functional profiling of the expression data highlighted immune‐relevant concepts related to antigen processing and natural killer cell‐mediated cytotoxicity. Similar profiles were apparent when gene expression was investigated in murine colon26 CRC cells treated with CXD101. Significantly, these changes were also apparent in syngeneic colon26 tumours growing in vivo. The ability of CXD101 to affect immune‐relevant gene expression coincided with changes in the tumour microenvironment (TME), especially in the subgroups of CD4 and CD8 tumour‐infiltrating T lymphocytes. The altered TME reflected enhanced antitumour activity when CXD101 was combined with immune checkpoint inhibitors (ICIs), such as anti‐PD‐1 and anti‐CTLA4. The ability of CXD101 to reinstate immune‐relevant gene expression in the TME and act together with ICIs provides a powerful rationale for exploring the combination therapy in human cancers., CXD101 is a novel histone deacetylase inhibitor with potent antitumour activity. We find that CXD101 reinstates immune‐relevant gene expression in tumours, which includes major histocompatibility complex class I and class II genes. This enables CXD101 to enhance the activity of immune checkpoint therapies, such as anti‐PD‐1, on tumours that would otherwise be poorly responsive and coincides with increased T lymphocyte infiltration into the tumour microenvironment.
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- 2021
13. No Association between ABCB1 G2677T/A or C3435T Polymorphisms and Survival of Breast Cancer Patients—A 10-Year Follow-Up Study in the Polish Population
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Ewa Totoń, Barbara Jacczak, Wojciech Barczak, Paweł Jagielski, Robert Gryczka, Hanna Hołysz, Sylwia Grodecka-Gazdecka, and Błażej Rubiś
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ATP Binding Cassette Transporter, Subfamily B ,Genetics ,Humans ,Breast Neoplasms ,Estrogens ,Female ,ATP Binding Cassette Transporter, Subfamily B, Member 1 ,Poland ,Polymorphism, Single Nucleotide ,breast cancer risk ,ABCB1 ,polymorphism ,glycoprotein P ,drug resistance ,hormone receptors ,Genetics (clinical) ,Follow-Up Studies - Abstract
Many intensive studies are devoted to identifying novel cancer diagnostics or therapy strategies that would boost cancer therapy efficacy and recovery rates. Importantly, polymorphisms in the genes coding for ABC family proteins were considered good candidates for cancer development risk or cancer drug resistance markers. For this reason, we decided to assess the contribution of ABCB1’s most common variants (i.e., G2677T/A in exon 21/rs2032582 and C3435T in exon 26/rs1045642) to the cancer therapy response in breast cancer patients. A 10-year follow-up analysis of 157 breast cancer patients was performed. Clinical assessment, ABCB1 polymorphism status, estrogen/progesterone/human epidermal receptors status, and other characteristics were compared according to the follow-up status using the Chi-square statistic. For the analysis of overall survival curves in TCGA breast cancer patients, the Xena browser was used. We show that neither 2677 nor 3435 polymorphisms contributed to the survival of breast cancer patients. Interestingly, but not surprisingly, estrogen and progesterone receptors status were good prognostic factors and positively correlated with a disease-free survival for up to 10 years. To summarize, ABCB1 polymorphisms status may be one of the numerous factors that affect cancer development. However, they may not be the critical ones when it comes to risk or recovery assessment. Consequently, they may not be treated as reliable prognostic or predictive markers in breast cancer patients’ evaluation, which supports the previous findings and current knowledge.
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- 2022
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14. The Kinetics of γ-H2AX During Radiotherapy of Head and Neck Cancer Potentially Allow for Prediction of Severe Mucositis
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Wiktoria Maria Suchorska, Tomasz Winiecki, J. Kazmierska, Łukasz Łuczewski, Wojciech Barczak, and Magdalena Marciniak
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Male ,Mucositis ,medicine.medical_specialty ,Radiation-Sensitizing Agents ,Time Factors ,peripheral blood lymphocytes ,medicine.medical_treatment ,Lymphocyte ,R895-920 ,macromolecular substances ,Gastroenterology ,Severity of Illness Index ,030218 nuclear medicine & medical imaging ,Histones ,03 medical and health sciences ,Medical physics. Medical radiology. Nuclear medicine ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Lymphocytes ,Prospective Studies ,Phosphorylation ,skin and connective tissue diseases ,Chemotherapy ,Radiotherapy ,business.industry ,Head and neck cancer ,Significant difference ,Chemoradiotherapy ,medicine.disease ,Peripheral ,Radiation therapy ,medicine.anatomical_structure ,Oncology ,γ-H2AX ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Concomitant ,Female ,sense organs ,Cisplatin ,business ,Research Article - Abstract
Background The aim of the study was to evaluate the changes in γ-H2AX expression in peripheral blood lymphocytes (PBL) according to severity of radiation-induced mucositis. Patients and method Fifty patients with head and neck cancer treated with radiotherapy (RT) or chemoradiation were included in the study. Blood samples were collected before treatment to measure baseline γ-H2AX levels. Second sample was taken 45 minutes after the first RT fraction and then once a week, 45 min after irradiation. In patients treated with chemoradiation the blood sample was taken the day after chemotherapy. Mucositis was evaluated once a week and reported according to CTCAE v4 and RTOG/EORTC scales. PBL were analyzed with flow cytometry and level of H2AX phosphorylation at every time point was evaluated. Results In 35 patients mild to moderate (grade 1–2) mucositis was observed and 15 patients developed severe (grade 3) mucositis. No cases of grade 4 mucositis were observed. The difference in baseline levels of γ-H2AX between groups with mild and severe mucositis was statistically insignificant (p = 0.25). The statistically significant difference in γ-H2AX level was observed in week 7 of treatment (p = 0.01). No significant differences in γ-H2AX level were found neither between group treated with concomitant chemoradiation or RT alone neither between groups with and without common comorbidities. In the analysis of the kinetics of γ-H2AX during treatment, a statistically significant difference (p = 0.0088) between groups with mild and severe mucositis was observed. After fourth week of treatment levels of γ-H2AX decreased significantly in the group with severe mucositis and increased in patients with mild side effects. The observed difference was not caused by the decrease in peripheral lymphocyte count, which was similar in both groups. Conclusions Presented results indicate that severity of radiation-induced mucositis does not correlate directly with γ-H2AX levels measured in vivo in PBL. Prediction of mucositis grade based on γ-H2AX level is not yet possible, either before treatment or early during treatment, but preliminary results, indicating significant differences in γ-H2AX kinetics between groups, encourage further studies.
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- 2020
15. miRNAs as Biomarkers for Diagnosing and Predicting Survival of Head and Neck Squamous Cell Carcinoma Patients
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Augusto Schneider, Wojciech Barczak, Xiang Zhu, Sarah Ashiqueali, Michal M. Masternak, Allancer D. C. Nunes, Wojciech Golusiński, Agnieszka Sobecka, Mateusz Szewczyk, Sarah Noureddine, Tatiana D. Saccon, Paweł Golusiński, and Igor Piotrowski
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Larynx ,Cancer Research ,oropharyngeal cancer ,Differentially expressed mirnas ,Oral cavity ,medicine.disease_cause ,head and neck squamous cell carcinoma ,Article ,Pathogenesis ,stomatognathic system ,microRNA ,medicine ,otorhinolaryngologic diseases ,RC254-282 ,miRNA ,business.industry ,Cancer ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,oral cancer ,medicine.disease ,Head and neck squamous-cell carcinoma ,stomatognathic diseases ,medicine.anatomical_structure ,Oncology ,Cancer research ,laryngeal cancer ,Carcinogenesis ,business - Abstract
Simple Summary Head and Neck Squamous Cell Carcinoma (HNSCC) is the sixth most common cancer worldwide. It arises from the epithelium of the upper aerodigestive tract. Increasing evidence suggests that there is a significant role of microRNAs in HNSCC formation and progression. The aim of this study was to explore and compare the expression of HNSCC related miRNAs in tumor vs neighboring healthy tissue of HNSCC patients with tumors located in either the oral cavity, oropharynx, or larynx. Our results demonstrated that expression of these miRNAs was significantly different not only between healthy and tumor tissues, but also among tumor locations. Further analysis indicated that microRNA expression could be used to distinguish between tumor and healthy tissues, and prognose the overall survival of patients. Abstract Head and Neck Squamous Cell Carcinoma (HNSCC) is the sixth most common cancer worldwide. These tumors originate from epithelial cells of the upper aerodigestive tract. HNSCC tumors in different regions can have significantly different molecular characteristics. While many microRNAs (miRNAs) have been found to be involved in the regulation of the carcinogenesis and pathogenesis of HNSCC, new HNSCC related miRNAs are still being discovered. The aim of this study was to explore potential miRNA biomarkers that can be used to diagnose HNSCC and prognose survival of HNSCC patients. For this purpose, we chose a panel of 12 miRNAs: miR-146a-5p, miR-449a, miR-126-5p, miR-34a-5p, miR-34b-5p, miR-34c-5p, miR-217-5p, miR-378c, miR-6510-3p, miR-96-5p, miR-149-5p, and miR-133a-5p. Expression of these miRNAs was measured in tumor tissue and neighboring healthy tissue collected from patients diagnosed with HNSCC (n = 79) in either the oral cavity, oropharynx, or larynx. We observed a pattern of differentially expressed miRNAs at each of these cancer locations. Our study showed that some of these miRNAs, separately or in combination, could serve as biomarkers distinguishing between healthy and tumor tissue, and their expression correlated with patients’ overall survival.
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- 2021
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16. Addition of Popular Exogenous Antioxidant Agent, PBN, to Culture Media May Be an Important Step to Optimization of Myogenic Stem/Progenitor Cell Preparation Protocol
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Agnieszka Zimna, Agnieszka Malcher, Łukasz Kubaszewski, Natalia Rozwadowska, Magdalena Nowaczyk, Wojciech Barczak, Błażej Rubiś, Maciej Kurpisz, and Wojciech Łabędź
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0301 basic medicine ,Physiology ,Clinical Biochemistry ,Population ,SOD2 ,heart failure ,RM1-950 ,medicine.disease_cause ,Biochemistry ,Article ,03 medical and health sciences ,0302 clinical medicine ,Gene expression ,medicine ,α-phenyl-N-tert-butyl nitrone ,oxidative stress ,Progenitor cell ,education ,Molecular Biology ,education.field_of_study ,Chemistry ,Myogenesis ,apoptosis ,Cell Biology ,Hypoxia (medical) ,Cell biology ,030104 developmental biology ,Apoptosis ,post-infarction heart ,Therapeutics. Pharmacology ,medicine.symptom ,skeletal muscle derived stem cells ,030217 neurology & neurosurgery ,Oxidative stress - Abstract
The aim of the study was to modify human skeletal muscle-derived stem/progenitor cells (SkMDS/PCs) and demonstrate the optimal cell preparation protocol for application in post-infarction hearts. We used conditioned SkMDS/PC culture medium with α-phenyl-N-tert-butyl nitrone (PBN). SkMDS/PCs were cultured under hypoxic conditions and the results were compared to the standard ones. We observed a significant increase of CD-56 positive phenotypic marker the ability to form functional myotubes, increase in the proportion of young cells in cell primary suspensions, and a decrease in the percentage of apoptotic cells among PBN-conditioned cells in normoxia an hypoxia. We also observed significantly higher levels of SOD3 expression, maintained expression of SOD1, SOD2, and CAT, a higher level of BCL2 gene expression, and a rather significant decrease in Hsp70 gene expression in PBN-conditioned SkMDS/PCs compared to the WT population under hypoxic conditions. In addition, significant increase of myogenic genes expression was observed after PBN addition to culture medium, compared to WT population under hypoxia. Interestingly, PBN addition significantly increased the lengths of telomeres under hypoxia. Based on the data obtained, we can postulate that PBN conditioning of human SkMDS/PCs could be a promising step in improving myogenic cell preparation protocol for pro-regenerative treatment of post-infarction hearts.
- Published
- 2021
17. Contribution of Dopamine Transporter Gene Methylation Status to Cannabis Dependency
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Grzegorz Trybek, Krzysztof Chmielowiec, Jolanta Chmielowiec, Jolanta Masiak, Aleksandra Suchanecka, Błażej Rubiś, Wojciech Barczak, Katarzyna Grocholewicz, Anna Grzywacz, and Paweł Jagielski
- Subjects
cannabis ,Bisulfite sequencing ,CpG sites ,Article ,lcsh:RC321-571 ,03 medical and health sciences ,0302 clinical medicine ,DAT1 ,Epigenetics ,Gene ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,030304 developmental biology ,Dopamine transporter ,Genetics ,0303 health sciences ,biology ,epigenetics ,General Neuroscience ,Promoter ,Methylation ,dopamine transporter gene ,CpG site ,DNA methylation ,biology.protein ,030217 neurology & neurosurgery ,dependency - Abstract
The susceptibility to cannabis dependency results from the influence of numerous factors such as social, genetic, as well as epigenetic factors. Many studies have attempted to discover a molecular basis for this disease. However, our study aimed at evaluating the connection between altered methylation of the dopamine transporter gene (DAT1) promoter CpG sites and cannabis dependency. In the cases of some DNA sequences, including the DAT1 gene region, their methylation status in blood cells may reflect a systemic modulation in the whole organism. Consequently, we isolated the DNA from the peripheral blood cells from a group of 201 cannabis-dependent patients and 285 controls who were healthy volunteers and who were matched for age and sex. The DNA was subjected to bisulfite conversion and sequencing. Our analysis revealed no statistical differences in the general methylation status of the DAT1 gene promoter CpG island between the patients and controls. Yet, the analysis of individual CpG sites where methylation occurred indicated significant differences. These sites are known to be bound by transcription factors (e.g., SP1, p53, PAX5, or GR), which, apart from other functions, were shown to play a role in the development of the nervous system. Therefore, DAT1 gene promoter methylation studies may provide important insight into the mechanism of cannabis dependency.
- Published
- 2020
18. hTERT gene knockdown enhances response to radio- and chemotherapy in head and neck cancer cell lines through a DNA damage pathway modification
- Author
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Wojciech Golusiński, Paweł Golusiński, Agnieszka Sobecka, Wiktoria Maria Suchorska, Michal M. Masternak, Wojciech Barczak, and Blazej Rubis
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0301 basic medicine ,Small interfering RNA ,Cell cycle checkpoint ,DNA Repair ,DNA repair ,cells ,Down-Regulation ,lcsh:Medicine ,Apoptosis ,Article ,Flow cytometry ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,medicine ,Gene silencing ,Humans ,Telomerase reverse transcriptase ,DNA Breaks, Double-Stranded ,RNA, Small Interfering ,lcsh:Science ,Telomerase ,neoplasms ,Gene knockdown ,Multidisciplinary ,medicine.diagnostic_test ,Chemistry ,lcsh:R ,Cell Cycle Checkpoints ,enzymes and coenzymes (carbohydrates) ,030104 developmental biology ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Gene Knockdown Techniques ,embryonic structures ,Cancer research ,lcsh:Q ,biological phenomena, cell phenomena, and immunity ,DNA Damage - Abstract
The aim of the study was to analyze the effect of hTERT gene knockdown in HNSCC cells by using novel in vitro models of head and neck cancer (HNSCC), as well as improving its personalized therapy. To obtain the most efficient knockdown siRNA, shRNA-bearing lentiviral vectors were used. The efficiency of hTERT silencing was verified with qPCR, Western blot, and immunofluorescence staining. Subsequently, the type of cell death and DNA repair mechanism induction after hTERT knockdown was assessed with the same methods, followed by flow cytometry. The effect of a combined treatment with hTERT gene knockdown on Double-Strand Breaks levels was also evaluated by flow cytometry. Results showed that the designed siRNAs and shRNAs were effective in hTERT knockdown in HNSCC cells. Depending on a cell line, hTERT knockdown led to a cell cycle arrest either in phase G1 or phase S/G2. Induction of apoptosis after hTERT downregulation with siRNA was observed. Additionally, hTERT targeting with lentiviruses, followed by cytostatics administration, led to induction of apoptosis. Interestingly, an increase in Double-Strand Breaks accompanied by activation of the main DNA repair mechanism, NER, was also observed. Altogether, we conclude that hTERT knockdown significantly contributes to the efficacy of HNSCC treatment.
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- 2018
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19. The importance of stem cell engineering in head and neck oncology
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Wiktoria Maria Suchorska, Wojciech Barczak, Wojciech Golusiński, Paweł Golusiński, Michal M. Masternak, and Lukasz Luczewski
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0301 basic medicine ,Oncology ,medicine.medical_specialty ,Reconstructive surgery ,Bioengineering ,Review ,Vocal Cords ,Applied Microbiology and Biotechnology ,03 medical and health sciences ,Tissue engineering ,Internal medicine ,medicine ,Humans ,Induced pluripotent stem cell ,Head and neck cancer ,Tissue Engineering ,HESC ,Stem Cells ,Mesenchymal stem cell ,Cancer ,Cell Differentiation ,General Medicine ,Plastic Surgery Procedures ,medicine.disease ,Head and neck squamous-cell carcinoma ,Trachea ,Induced pluripotent stem cells ,030104 developmental biology ,Cartilage ,Head and Neck Neoplasms ,Carcinoma, Squamous Cell ,Quality of Life ,Mesenchymal stem cells ,Stem cell ,Stem cell tissue engineering ,Biotechnology - Abstract
Head and neck squamous cell carcinoma is the sixth leading cause of cancer worldwide. The most common risk factors are carcinogens (tobacco, alcohol), and infection of the human papilloma virus. Surgery is still considered as the treatment of choice in case of head and neck cancer, followed by a reconstructive surgery to enhance the quality of life in the patients. However, the widespread use of artificial implants does not provide appropriate physiological activities and often cannot act as a long-term solution for the patients. Here we review the applicability of multiple stem cell types for tissue engineering of cartilage, trachea, vocal folds and nerves for head and neck injuries. The ability of the cells to self-renew and maintain their pluripotency state makes them an attractive tool in tissue engineering.
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- 2016
20. Association of DNA repair genes polymorphisms and mutations with increased risk of head and neck cancer: a review
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Anna Wegner, Wojciech Golusiński, Wiktoria Maria Suchorska, Agata Dylawerska, and Wojciech Barczak
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0301 basic medicine ,Genome instability ,Cancer Research ,medicine.medical_specialty ,DNA Repair ,DNA repair ,DNA damage ,Review Article ,03 medical and health sciences ,0302 clinical medicine ,Radioresistance ,Internal medicine ,medicine ,Humans ,Head and neck cancer ,Genetics ,Hematology ,Polymorphism, Genetic ,business.industry ,Squamous Cell Carcinoma of Head and Neck ,General Medicine ,medicine.disease ,Head and neck squamous-cell carcinoma ,Cancer susceptibility ,030104 developmental biology ,Oncology ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Cancer cell ,Mutation ,Cancer research ,Carcinoma, Squamous Cell ,business ,Polymorphisms ,DNA Damage - Abstract
DNA repair mechanisms allow maintain genomic stability and proper functioning within the cells. Any aberrations may cause an increased risk of many diseases such as cancer. The most crucial risk factors for head and neck squamous cell carcinoma are behavioral factors, predominantly chronic exposure to tobacco, alcohol addiction, and infection with human papillomavirus or Epstein–Barr virus. These agents can induce DNA damage; therefore, cells must activate appropriate mechanisms in order to function correctly. Cancer cells are marked with genomic instability, which is associated with a greater tendency for the accumulation of a DNA damage and increased chemo- and radioresistance. Multiple studies have assessed the correlation of increased head and neck cancer (HNC) risk with polymorphism in the DNA repair genes. However, they suggest that interaction of DNA repair genes mutations with susceptibility to HNC depends on a patient’s race and risk factors, especially tobacco smoking. Further identification of these sequence variations must be performed. In this review, we discuss the current knowledge about the DNA repair genes mutations and polymorphisms associated with the high risk of head and neck treatment.
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- 2017
21. Universal Real-Time PCR-Based Assay for Lentiviral Titration
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Błażej Rubiś, Wiktoria Maria Suchorska, Wojciech Barczak, and Katarzyna Kulcenty
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Genetic Vectors ,Green Fluorescent Proteins ,Gene Expression ,Bioengineering ,Regulatory Sequences, Nucleic Acid ,Real-Time Polymerase Chain Reaction ,Applied Microbiology and Biotechnology ,Biochemistry ,Poor quality ,Viral vector ,Titration methods ,Transduction (genetics) ,Transduction, Genetic ,Humans ,Stable gene ,Molecular Biology ,biology ,Research ,Albumin ,Woodchuck hepatitis virus ,Lentivirus ,biology.organism_classification ,Virology ,WPRE ,Titer ,qPCR ,Real-time polymerase chain reaction ,Research studies ,HeLa Cells ,Biotechnology - Abstract
Lentiviral vectors are efficient vehicles for stable gene transfer in both dividing and non-dividing cells. This feature among others makes lentiviral vectors a powerful tool in molecular research. However, the use of lentiviruses in research studies and clinical trials requires a precise and validated titration method. In this study, we describe a qPCR-based approach for estimation of lentiviral vector titer (pLV-THM-GFP). The use of WPRE (Woodchuck Hepatitis Virus Posttranscriptional Regulatory Element) and albumin genes as templates for an SYBR green-based real-time qPCR method allows for a rapid, sensitive, reproducible, and accurate assessment of lentiviral copy number at an integrated lentiviral DNA level. Furthermore, this optimization enables measurement of lentiviral concentration even in very poor quality and small quantity material. Consequently, this approach provides researchers with a tool to perform low-cost assessment with highly repeatable results.
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