91 results on '"Xuefeng Qi"'
Search Results
2. Non-cytopathic bovine viral diarrhea virus (BVDV) inhibits innate immune responses via induction of mitophagy
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Zhijun Li, Ying Zhang, Bao Zhao, Qinghong Xue, Chunjiang Wang, Siyu Wan, Jingyu Wang, Xiwen Chen, and Xuefeng Qi
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BVDV ,cGAS ,innate immunity ,MAVS ,mitophagy ,PINK1-Parkin ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Bovine viral diarrhea virus (BVDV) belongs to the genus Pestivirus within the family Flaviviridae. Mitophagy plays important roles in virus-host interactions. Here, we provide evidence that non-cytopathic (NCP) BVDV shifts the balance of mitochondrial dynamics toward fission and induces mitophagy to inhibit innate immune responses. Mechanistically, NCP BVDV triggers the translocation of dynamin-related protein (Drp1) to mitochondria and stimulates its phosphorylation at Ser616, leading to mitochondrial fission. In parallel, NCP BVDV-induced complete mitophagy via Parkin-dependent pathway contributes to eliminating damaged mitochondria to inhibit MAVS- and mtDNA-cGAS-mediated innate immunity responses, mtROS-mediated inflammatory responses and apoptosis initiation. Importantly, we demonstrate that the LIR motif of ERNS is essential for mitophagy induction. In conclusion, this study is the first to show that NCP BVDV-induced mitophagy plays a central role in promoting cell survival and inhibiting innate immune responses in vitro.
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- 2024
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3. Posttraumatic growth of medical staff during COVID-19 pandemic: A scoping review
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Qian Li, Yirong Zhu, Xuefeng Qi, Haifei Lu, Nafei Han, Yan Xiang, Jingjing Guo, and Lizhu Wang
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COVID-19 ,Posttraumatic growth ,Psychological ,Medical staff ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background The COVID-19 pandemic has imposed unprecedented stress and challenges upon medical staff, potentially resulting in posttraumatic growth (PTG). This scoping review aims to synthesize the existing knowledge on PTG among medical staff during the pandemic by identifying its current status and potential influencing factors. The findings may provide a foundation for future research and interventions to enhance the medical staff’s psychological resilience and well-being. Methods Literature was systematically searched on PTG among medical staff during the COVID-19 pandemic from 01 January 2020 to 31 December 2022. The following databases were searched: PubMed, Web of Science, Embase, CINAHL, PsycINFO, Cochrane Library, China National Knowledge Infrastructure (CNKI), Chinese Biomedical Literature Service System (SinoMed), and Wanfang Data. Eligibility criteria included: (1) medical staff as research subjects; (2) a focus on “posttraumatic growth” or “alternative posttraumatic growth” related to the COVID-19 outbreak and pandemic; (3) discussion of the situation and influencing factors of PTG; and (4) study types, such as qualitative, quantitative, and mixed methods. Two researchers independently selected and extracted study characteristics (study design, study population, region, measurement instruments, and primary outcomes) from the included literature. The data were synthesized qualitatively and descriptively. Results Thirty-six papers from 12 countries met the inclusion criteria. Moderate PTG levels were observed among healthcare workers during the COVID-19 pandemic, with emphasis on “interpersonal relationships,” “changes in life philosophy,” and “growth in personal competence.” Influencing factors included trauma exposure, sociodemographics, psychological characteristics (resilience and positive qualities), coping, and social support. Conclusions This review discovered moderate PTG levels among medical staff during the COVID-19 pandemic, with critical areas in interpersonal relationships, life philosophy, and personal competence. The identified influencing factors can inform future research and interventions to enhance healthcare workers’ psychological resilience and well-being.
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- 2024
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4. Differential innate immune responses to fowl adenovirus serotype 4 infection in Leghorn male hepatocellular and chicken embryo fibroblast cells
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Xiaolan Hou, Lizhen Wang, Riteng Zhang, Gen Liu, Ting Wang, Bo Wen, Wenchi Chang, Shuizhong Han, Jinjie Han, Junyang Fang, Xuefeng Qi, and Jingyu Wang
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FAdV-4 ,LMH cells ,CEF cells ,transcriptomics ,cytokines ,Animal culture ,SF1-1100 - Abstract
ABSTRACT: Fowl adenovirus serotype 4 (FAdV-4) infections result in substantial economic losses in the poultry industry. Recent findings have revealed that FAdV-4 significantly suppresses the host immune response upon infection; however, the specific viral and host factors contributing to this immunomodulatory activity remain poorly characterized. Moreover, diverse cell types exhibit differential immune responses to FAdV-4 infection. To elucidate cell-specific host responses, we performed transcriptomic analysis of FAdV-4 infected leghorn male hepatocellular (LMH) and chicken embryo fibroblast (CEF) cells. Although FAdV-4 replicated more efficiently in LMH cells, it provoked limited interferon-stimulated gene induction. In contrast, FAdV-4 infection triggered robust antiviral responses in CEF cells, including upregulation of cytosolic DNA sensing and interferon-stimulated genes. Knockdown of key cytosolic DNA sensing molecules enhanced FAdV-4 replication in LMH cells while reducing interferon-stimulated gene expression. Our findings reveal cell-specific virus-host interactions that provide insight into FAdV-4 pathogenesis while identifying factors that mediate antiviral immunity against FAdV-4.
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- 2024
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5. Mycoplasma synoviae LP78 is a fibronectin/plasminogen binding protein, putative adhesion, and potential diagnostic antigen
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Shuizhong Han, Ying Wang, Lizhen Wang, Wenchi Chang, Bo Wen, Junyang Fang, Xiaolan Hou, Xuefeng Qi, and Jingyu Wang
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Mycoplasma synoviae ,LP78 ,adhesion ,fibronectin ,plasminogen ,ELISA ,Microbiology ,QR1-502 - Abstract
Mycoplasma synoviae (M. synoviae) is one of the major poultry pathogens causing infectious synovitis, airsacculitis, a high incidence of shell breakage, and egg production loss. However, the pathogenesis of M. synoviae remains unclear. Adhesion of mycoplasmas to host cells is a crucial step in infection and colonization. The purpose of this study was to determine the adhesive function of a putative P80 family lipoprotein (LP78) and evaluate its application in the detection of antibodies against M. synoviae. Recombinant LP78 (rLP78) was expressed in the supernatant component of Escherichia coli and mouse anti-rLP78 serum was prepared. Bioinformatic analysis and western blotting results revealed that LP78 was conservative among M. synoviae strains. It was distributed not only in the cytoplasm but also on the membrane of M. synoviae through western blotting and indirect immunofluorescence (IFA). The adherence of M. synoviae to DF-1 cells was significantly inhibited by mouse anti-rLP78 serum (p
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- 2024
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6. A vesicular stomatitis virus-based African swine fever vaccine prototype effectively induced robust immune responses in mice following a single-dose immunization
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Yunyun Ma, Junjun Shao, Wei Liu, Shandian Gao, Decai Peng, Chun Miao, Sicheng Yang, Zhuo Hou, Guangqing Zhou, Xuefeng Qi, and Huiyun Chang
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African swine fever virus ,vaccine prototypes ,vesicular stomatitis virus ,safety ,immune potency ,Microbiology ,QR1-502 - Abstract
IntroductionAfrican swine fever (ASF) is a highly contagious hemorrhagic fever disease in pigs caused by African swine fever virus (ASFV). It is very difficult to control and prevent ASF outbreaks due to the absence of safe and effective vaccines.MethodsIn order to develop a safe and effective ASF vaccine for the control and prevention of ASF, two ASFV recombinant vesicular stomatitis virus (VSV) live vector vaccine prototypes, containing the gene of p72, and a chimera of p30 and p54, were developed based on the replication-competent VSV, and named VSV-p72 and VSV-p35. The immune potency of VSV-p72 or VSV-p35 alone and in combination was evaluated in BALB/c mice via intramuscular and intranasal vaccination.ResultsThe results indicated that whether administered alone or in combination, the two vaccine prototypes showed acceptable safety in mice and, more importantly, induced high-level specific antibodies against p72, p30, and p54 of ASFV and a strong cellular immune response 28 days after vaccination. The sera from mice vaccinated with the vaccine prototypes significantly inhibited ASFV from infecting porcine alveolar macrophages (PAMs) in vitro. Most notably, the immunized sera from a mixture of VSV-p35 and VSV-p72 inhibited ASFV from infecting PAMs, with an inhibition rate of up to 78.58%.ConclusionOverall, our findings suggest that ASFV recombinant VSV live vector vaccine prototypes may become a promising candidate vaccine for the control and prevention of ASF.
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- 2024
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7. Evaluation of the protective efficacy of six major immunogenic proteins of Mycoplasma Synoviae
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Shuizhong Han, Ying Wang, Wenchi Chang, Lizhen Wang, Junyang Fang, Jingjing Han, Xiaolan Hou, Xuefeng Qi, and Jingyu Wang
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Mycoplasma synoviae ,subunit vaccine ,DnaK ,enolase ,EF-Tu ,MSPB ,Veterinary medicine ,SF600-1100 - Abstract
Mycoplasma synoviae (MS) is a primary avian pathogen prevalent worldwide that causes airsacculitis and synovitis in birds. Vaccination is recommended as the most cost-effective strategy in the control of MS infection. Novel alternative vaccines are needed for eradicating and controlling MS infection in flocks. DnaK, enolase, elongation factor Tu (EF-Tu), MSPB, NADH oxidase and LP78 are the major immunogenic antigens of MS and are promising targets for subunit vaccine candidates. In the present study, genes encoding DnaK, enolase, EF-Tu, MSPB, LP78, and NADH oxidase were cloned and expressed in Escherichia coli. Enzyme-linked immunosorbent assay showed that the six recombinant proteins were recognized by convalescent sera, indicating that they were expressed during infection. Two injections of the six subunit vaccines induced a robust antibody response and increased the concentrations of IFN-γ and IL-4, especially rEnolase and rEF-Tu. The proliferation of peripheral blood lymphocytes was enhanced in all of the immunized groups. Chickens immunized with rEnolase, rEF-Tu, rLP78, and rMSPB conferred significant protection against MS infection, as indicated by significantly lower DNA copies in the trachea, lower scores of air sac lesions, and lesser tracheal mucosal thickness than that in the challenge control. Especially, rEnolase provided the best protective efficacy, followed by rEF-Tu, rMSPB, and rLP78. Our finds demonstrate that the subunit vaccines and bacterin can only reduce the lesions caused by MS infection, but not prevent colonization of the organism. Our findings may contribute to the development of novel vaccine agents against MS infection.
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- 2024
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8. Fowl adenovirus serotype 4 enters leghorn male hepatocellular cells via the clathrin-mediated endocytosis pathway
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Ting Wang, Lizhen Wang, Wei Li, Xiaolan Hou, Wenchi Chang, Bo Wen, Shuizhong Han, Yan Chen, Xuefeng Qi, and Jingyu Wang
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FAdV-4 ,entry ,LMH cells ,clathrin ,endocytosis ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Hepatitis-hydropericardium syndrome (HHS) induced by fowl adenovirus serotype-4 (FAdV-4) has caused large economic losses to the world poultry industry in recent years. HHS is characterized by pericardial effusion and hepatitis, manifesting as a swollen liver with focal necroses and petechial haemorrhage. However, the process of FAdV-4 entry into hepatic cells remains largely unknown. In this paper, we present a comprehensive study on the entry mechanism of FAdV-4 into leghorn male hepatocellular (LMH) cells. We first observed that FAdV-4 internalization was inhibited by chlorpromazine and clathrin heavy chain (CHC) knockdown, suggesting that FAdV-4 entry into LMH cells depended on clathrin. By using the inhibitor dynasore, we showed that dynamin was required for FAdV-4 entry. In addition, we found that FAdV-4 entry was dependent on membrane cholesterol, while neither the knockdown of caveolin nor the inhibition of a tyrosine kinase-based signalling cascade affected FAdV-4 infection. These results suggested that FAdV-4 entry required cholesterol but not caveolae. We also found that macropinocytosis played a role, and phosphatidylinositol 3-kinase (PI3K) was required for FAdV-4 internalization. However, inhibitors of endosomal acidification did not prevent FAdV-4 entry. Taken together, our findings demonstrate that FAdV-4 enters LMH cells through dynamin- and cholesterol-dependent clathrin-mediated endocytosis, accompanied by the involvement of macropinocytosis requiring PI3K. Our work potentially provides insight into the entry mechanisms of other avian adenoviruses.
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- 2023
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9. Long noncoding RNA IRF1-AS is associated with peste des petits ruminants infection
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Bo Wen, Xuefeng Qi, Daiyue Lv, Lulu Yang, Pan Tang, Wenchi Chang, Shuizhong Han, Shengmeng Yu, Shaopeng Wei, Qinghong Xue, and Jingyu Wang
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PPRV ,lncRNAs ,innate immune response ,IRF1 ,IRF3 ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Peste des petits ruminants (PPR) is an acute and highly contagious disease and has long been a significant threat to small ruminant productivity worldwide. However, the molecular mechanism underlying host-PPRV interactions remains unclear and the long noncoding RNAs (lncRNAs) regulation of PPR virus (PPRV) infection has rarely been reported so far. Here, we first demonstrated that PPRV infection can induce an obvious innate immune response in caprine endometrial epithelial cells (EECs) at 48 h post-infection (hpi) with an MOI of 3. Subsequently, we determined that PPRV infection is associated with 191 significantly differentially expressed (SDE) lncRNAs, namely, 137 upregulated and 54 downregulated lncRNAs, in caprine EECs compared with mock control cells at 48 hpi by using deep sequencing technology. Importantly, bioinformatics preliminarily analyses revealed that these DE lncRNAs were closely related to the immune response. Furthermore, we identified a system of lncRNAs related to the immune response and focused on the role of lncRNA 10636385 (IRF1-AS) in regulating the innate immune response. Interestingly, we found that IRF1-AS was a potent positive regulator of IFN-β and ISG production, which can significantly inhibit PPRV replication in host cells. In addition, our data revealed that IRF1-AS was positively correlated with its potential target gene, IRF1, which enhanced the activation of IRF3 and the expression of ISGs and interacted with IRF3. This study suggests that IRF1-AS could be a new host factor target for developing antiviral therapies against PPRV infection.
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- 2022
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10. Carboniferous to Early Permian tectono-sedimentary evolution in the western Junggar Basin, NW China: implication for the evolution of Junggar Ocean
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Fan Yang, Jianzhong Li, Shan Lu, Baoli Bian, Hailei Liu, Yanzhao Wei, Xuefeng Qi, and Hao Yang
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basin evolution ,western Junggar Basin ,forearc basin ,backarc basin ,closure time ,Junggar Ocean ,Science - Abstract
The discovery of Carboniferous hydrocarbon source rocks in the Mahu-Shawan Sag has implied considerable exploration potential in the Carboniferous strata in the western Junggar Basin. However, controversy has long surrounded when and how the Junggar Ocean was eventually closed, leading to a poor understanding of the Carboniferous basin evolution and the continental growth of the Central Asian Orogenic Belt. We performed stratigraphic and geochronologic studies to establish the chronostratigraphic framework of the western Junggar Basin to better understand its tectonic-sedimentary evolution during the Carboniferous-Early Permian. Three tectonostratigraphic units in the southern West Junggar region have been identified as Early Carboniferous shallow-deep marine sequences, Late Carboniferous coast-shallow marine sequences, and Early Permian continental sequences. The Carboniferous strata are similar to forearc and backarc-rift sequences in the Western Fault Belt and the Mahu-Shawan Sag, respectively. The Lower Permian strata in the southern West Junggar region are all continental sequences. Seismic profiles indicate extensional settings in the early stage of Late Carboniferous and Early Permian but a compressional setting at the end of Late Carboniferous. Geochemical data have suggested a Carboniferous continental arc setting and an Early Permian within-plate extensional setting. Meanwhile, calc-alkaline arc magma migrated from the Zhongguai High to the Western Fault Belt at the end of the Late Carboniferous. Collectively, the tectonic-sedimentary evolution in the Carboniferous-Early Permian of the southern West Junggar region can be divided into three stages: 1) Early Carboniferous subduction, 2) Late Carboniferous slab roll-back, and 3) Early Permian intra-continental evolution stage. This model constrains the closure of the Junggar Ocean at the Late Carboniferous.
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- 2023
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11. Extracellular vesicles derived from PPRV-infected cells enhance signaling lymphocyte activation molecular (SLAM) receptor expression and facilitate virus infection.
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Yan Chen, Ting Wang, Yang Yang, Yuan Fang, Bao Zhao, Wei Zeng, Daiyue Lv, Leyan Zhang, Yanming Zhang, Qinghong Xue, Xiwen Chen, Jingyu Wang, and Xuefeng Qi
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Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
Peste des petits ruminants virus (PPRV) is an important pathogen that seriously influences the productivity of small ruminants worldwide. PPRV is lymphotropic in nature and SLAM was identified as the primary receptor for PPRV and other Morbilliviruses. Many viruses have been demonstrated to engage extracellular vesicles (EVs) to facilitate their replication and pathogenesis. Here, we provide evidence that PPRV infection significantly induced the secretion levels of EVs from goat PBMC, and that PPRV-H protein carried in EVs can enhance SLAM receptor expression in the recipient cells via suppressing miR-218, a negative miRNA directly targeting SLAM gene. Importantly, EVs-mediated increased SLAM expression enhances PPRV infectivity as well as the expression of various cytokines related to SLAM signaling pathway in the recipient cells. Moreover, our data reveal that PPRV associate EVs rapidly entry into the recipient cells mainly through macropinocytosis pathway and cooperated with caveolin- and clathrin-mediated endocytosis. Taken together, our findings identify a new strategy by PPRV to enhance virus infection and escape innate immunity by engaging EVs pathway.
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- 2022
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12. Comparative clinical studies of primary chemoradiotherapy versus S-1 and nedaplatin chemotherapy against stage IVb oesophageal squamous cell carcinoma: a multicentre open-label randomised controlled trial
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Xin Wang, Bo Song, Yang Liu, Yang Wang, Yun Liu, Liping Wu, Xiaohong Wang, Junqi Liu, Anping Zheng, Narasimha M Beeraka, Kuo Chen, Zhang Song, Jianchao Luo, Yanhui Cui, Zhenhe Jia, Xiangyu Song, Hongqi Wang, Xuefeng Qi, Jinshan Ren, Jixing Cai, Xainying Fang, Mikhail Y Sinelnikov, Vladimir N Nikolenko, M V Greeshma, and Ruitai Fan
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Medicine - Abstract
Introduction Oesophageal squamous cell carcinoma (OSCC) is one of the most commonly occurring devastating tumours worldwide, including in China. To date, the standard care of patients with stage IV OSCC is systemic chemotherapy and palliative care, which results in poor prognosis. However, no consensus has been established regarding the role of radiotherapy in targeting the primary tumour in patients with stage IVa OSCC. Thus, the aim of this study is to assess the effectiveness of primary radiotherapy combined with S-1 and nedaplatin (NPD) chemotherapy in the patients with stage IV OSCC.Methods and analysis The study is a multicentre, open-label, randomised controlled trial. A total of 180 eligible patients with stage IV OSCC will be randomised into a study group (90 patients) and a control group (90 patients). Patients in the study group will receive radiotherapy to the primary tumour at a dose of 50.4 Gy combined with 4–6 cycles of S-1 and NPD chemotherapy. In the control group, patients will only receive 4–6 cycles of S-1 and NPD chemotherapy. The primary and secondary outcomes will be measured. The differences between the two groups will be statistically analysed with regard to overall survival, the progression-free survival and safety. All outcomes will be ascertained before treatment, after treatment and after the follow-up period.The results of this study will provide evidence on the role of radiotherapy in patients with stage IV OSCC in China, which will show new options for patients with advanced oesophageal cancer.Ethics and dissemination This study was approved by the Institutional Ethics Committee of The First Hospital Affiliated of Zhengzhou University (approval number: SS-2018–04).Trial registration The trial has been registered at the Chinese Clinical Trial Registry (ChiCTR1800015765) on 1 November 2018; retrospectively registered, http://www.chictr.org.cn/index.aspx.
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- 2022
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13. Major breakthrough of Well Gaotan 1 and exploration prospects of lower assemblage in southern margin of Junggar Basin, NW China
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Jinhu DU, Dongming ZHI, Jianzhong LI, Disheng YANG, Yong TANG, Xuefeng QI, Lixin XIAO, and Lingyun WEI
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Petroleum refining. Petroleum products ,TP690-692.5 - Abstract
Well Gaotan 1 was tested a high yield oil and gas flow of more than 1 000 m3 a day in the Cretaceous Qingshuihe Formation, marking a major breakthrough in the lower assemblage of the southern margin of Junggar Basin. The lower assemblage in the southern margin of the Junggar Basin has favorable geological conditions for forming large Petroleum fields, including: (1) Multiple sets of source rocks, of which the Jurassic and Permian are the main source rocks, with a large source kitchen. (2) Multiple sets of effective reservoirs, namely Cretaceous Qingshuihe Formation, Jurassic Toutunhe Formation and the Khalza Formation etc. (3) Regional thick mudstone caprock of Cretaceous Tugulu Group, generally with abnormally high pressure and good sealing ability. (4) Giant structural traps and litho-stratigraphic traps are developed. The northern slope also has the conditions for large-scale litho-stratigraphic traps. (5) Static elements such as source rocks, reservoirs and caprocks are well matched, and the dynamic evolution is suitable for large oil and gas accumulation. The lower assemblage of the southern margin of the Junggar Basin has three favorable exploration directions, the Sikeshu Sag in the west part, the large structures in the middle and eastern part, and the northern slope. Key Words: southern margin of Junggar Basin, Well Gaotan 1, lower assemblage, accumulation condition, exploration direction
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- 2019
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14. Interactions Among Expressed MicroRNAs and mRNAs in the Early Stages of Fowl Adenovirus Aerotype 4-Infected Leghorn Male Hepatocellular Cells
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Ning Wu, Bo Yang, Bo Wen, Ting Wang, Jiaona Guo, Xuefeng Qi, and Jingyu Wang
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fowl adenovirus serotype 4 ,entry ,leghorn male hepatocellular cells ,RNA-seq ,mRNA–miRNA integrate analysis ,Microbiology ,QR1-502 - Abstract
Hydropericardium-hepatitis syndrome (HHS) is caused by some strains of fowl adenovirus serotype 4 (FAdV-4). However, the mechanism of FAdV-4 entry is not well understood. Therefore, to investigate the changes in host cellular response at the early stage of FAdV-4 infection, a conjoint analysis of miRNA-seq and mRNA-seq was utilized with leghorn male hepatocellular (LMH) cells at 30, 60, and 120 min after FAdV-4 infection. In total, we identified 785 differentially expressed (DE) miRNAs and 725 DE mRNAs in FAdV-4-infected LMH cells. Most miRNAs and mRNAs, including gga-miR-148a-3p, gga-miR-148a-5p, gga-miR-15c-3p, CRK, SOCS3, and EGR1, have not previously been reported to be associated with FAdV-4 infection. The conjoint analysis of the obtained data identified 856 miRNA–mRNA pairs at three time points. The interaction network analysis showed that gga-miR-128-2-5p, gga-miR-7475-5p, novel_miR205, and TCF7L1 were located in the core of the network. Furthermore, the relationship between gga-miR-128-2-5p and its target OBSL1 was confirmed using a dual-luciferase reporter system and a real-time quantitative polymerase chain reaction assay. In vitro experiments revealed that both gga-miR-128-2-5p overexpression and OBSL1 loss of function inhibited FAdV-4 entry. These results suggested that gga-miR-128-2-5p plays an important role in FAdV-4 entry by targeting OBSL1. To the best of our knowledge, the present study is the first to analyze host miRNA and mRNA expression at the early stage of FAdV-4 infection; furthermore, the results of this study help to elucidate the molecular mechanisms of FAdV-4 entry.
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- 2020
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15. MicroRNA-1 Negatively Regulates Peripheral NK Cell Function via Tumor Necrosis Factor-Like Weak Inducer of Apoptosis (TWEAK) Signaling Pathways During PPRV Infection
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Xuefeng Qi, Zhen Li, Huan Li, Ting Wang, Yanming Zhang, and Jingyu Wang
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MicroRNA-1 ,TWEAK ,PPRV ,goat ,NK cells ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Peste des petits ruminants virus (PPRV) has emerged as a significant threat to the productivity of small ruminants worldwide. PPRV is lymphotropic in nature and induces in the hosts a transient but severe immunosuppression, especially innate immunity. However, it remains largely unknown how NK cells respond and are regulated at the earliest time points after an acute viral PPRV infection in goats. In this study, we revealed that multiple immune responses of goat peripheral NK cells were compromised during PPRV infection, including the cytolytic effector molecule expression and cytokine production. Importantly, we demonstrated that PPRV infection stimulated the expression of TWEAK, a negative regulator of cytotoxic function of NK cells, which may be involved in the suppression of cytotoxicity as well as cytokine production in infected goat NK cells. Furthermore, we found that PPRV infection induced TWEAK expression in goat NK cells involving post-transcription by suppressing miR-1, a novel negative miRNA directly targeting the TWEAK gene. Moreover, replication of virus is required for inhibition of miR-1 expression during PPRV infection, and the non-structural V protein of PPRV plays an important role in miR-1 mediated TWEAK upregulation. Additionally, we revealed that the regulation of NK cell immune responses by TWEAK is mediated by MyD88, SOCS1, and STAT3. Taken together, our results demonstrated that TWEAK may play a key role in regulating goat peripheral NK cell cytotoxicity and cytokine expression levels during PPRV infection.
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- 2020
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16. Autophagy enhances the replication of Peste des petits ruminants virus and inhibits caspase-dependent apoptosis in vitro
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Bo Yang, Qinghong Xue, Xuefeng Qi, Xueping Wang, Peilong Jia, Shuying Chen, Ting Wang, Tianxia Xue, and Jingyu Wang
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Peste des petits ruminants virus (PPRV) ,autophagy ,apoptosis ,replication ,caprine endometrial epithelial cells (EECs) ,Infectious and parasitic diseases ,RC109-216 - Abstract
Peste des petits ruminants (PPR) is an acute and highly contagious disease in small ruminants that causes significant economic losses in developing countries. An increasing number of studies have demonstrated that both autophagy and apoptosis are important cellular mechanisms for maintaining homeostasis, and they participate in the host response to pathogens. However, the crosstalk between apoptosis and autophagy in host cells during PPRV infection has not been clarified. In this study, autophagy was induced upon virus infection in caprine endometrial epithelial cells (EECs), as determined by the appearance of double- and single-membrane autophagy-like vesicles, LC3-I/LC3-II conversion, and p62 degradation. We also found that PPRV infection triggered a complete autophagic response, most likely mediated by the non-structural protein C and nucleoprotein N. Moreover, our results suggest that autophagy not only promotes the replication of PPRV in EECs but also provides a potential mechanism for inhibiting PPRV-induced apoptosis. Inhibiting autophagosome formation by wortmannin and knocking down the essential autophagic proteins Beclin-1 and ATG7 induces caspase-dependent apoptosis in EECs in PPRV infection. However, inhibiting autophagosome and lysosome fusion by NH4Cl and chloroquine did not increase the number of apoptotic cells. Collectively, these data are the first to indicate that PPRV-induced autophagy inhibits caspase-dependent apoptosis and thus contributes to the enhancement of viral replication and maturity in host cells.
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- 2018
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17. MicroRNA expression profiling of goat peripheral blood mononuclear cells in response to peste des petits ruminants virus infection
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Xuefeng Qi, Ting Wang, Qinghong Xue, Zhen Li, Bo Yang, and Jingyu Wang
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Veterinary medicine ,SF600-1100 - Abstract
Abstract Peste des petits ruminants virus (PPRV) belongs to the genus Morbillivirus that causes an acute and highly contagious disease in goats and sheep. Virus infection can trigger the change in the cellular microRNA (miRNA) expression profile, which play important post-transcriptional regulatory roles in gene expression and can greatly influence viral replication and pathogenesis. Here, we employed deep sequencing technology to determine cellular miRNA expression profile in goat peripheral blood mononuclear cells (PBMC) infected with Nigeria 75/1 vaccine virus, a widely used vaccine strain for mass vaccination programs against Peste des petits ruminants. Expression analysis demonstrated that PPRV infection can elicit 316 significantly differentially expressed (DE) miRNA including 103 known and 213 novel miRNA candidates in infected PBMC at 24 hours post-infection (hpi) as compared with a mock control. Target prediction and functional analysis of these DEmiRNA revealed significant enrichment for several signaling pathways including TLR signaling pathways, PI3K-Akt, endocytosis, viral carcinogenesis, and JAK-STAT signaling pathways. This study provides a valuable basis for further investigation of the roles of miRNA in PPRV replication and pathogenesis.
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- 2018
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18. Binding and entry of peste des petits ruminants virus into caprine endometrial epithelial cells profoundly affect early cellular gene expression
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Bo Yang, Xuefeng Qi, Zhijie Chen, Shuying Chen, Qinghong Xue, Peilong Jia, Ting Wang, and Jingyu Wang
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Veterinary medicine ,SF600-1100 - Abstract
Abstract Peste des petits ruminants virus (PPRV), the etiological agent of peste des petits ruminants (PPR), causes an acute or subacute disease in small ruminants. Although abortion is observed in an unusually large proportion of pregnant goats during outbreaks of PPR, the pathogenic mechanism underlying remains unclear. Here, the gene expression profile of caprine endometrial epithelial cells (EECs) infected with PPRV Nigeria 75/1 was determined by DNA microarray to investigate the cellular response immediately after viral entry. The microarray analysis revealed that a total of 146 genes were significantly dysregulated by PPRV internalization within 1 h post-infection (hpi). Of these, 85 genes were upregulated and 61 genes were downregulated. Most of these genes, including NFKB1A, JUNB, and IL1A, have not previously been reported in association with PPRV infection in goats. Following viral replication (24 hpi), the expression of 307 genes were significantly upregulated and that of 261 genes were downregulated. The data for the genes differentially expressed in EECs were subjected to a time sequence profile analysis, gene network analysis and pathway analysis. The gene network analysis showed that 13 genes (EIF2AK3, IL10, TLR4, ZO3, NFKBIB, RAC1, HSP90AA1, SMAD7, ARG2, JUNB, ZFP36, APP, and IL1A) were located in the core of the network. We clearly demonstrate that PPRV infection upregulates the expression of nectin-4 after 1 hpi, which peaked at 24 hpi in EECs. In conclusion, this study demonstrates the early cellular gene expression in the caprine endometrial epithelial cells after the binding and entry of PPRV.
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- 2018
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19. Transcriptome Analysis Reveals the Potential Role of Long Noncoding RNAs in Regulating Fowl Adenovirus Serotype 4-Induced Apoptosis in Leghorn Male Hepatocellular Cells
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Bo Wen, Xueping Wang, Lulu Yang, Ting Wang, Xiaolan Hou, Xuefeng Qi, and Jingyu Wang
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fowl adenovirus serotype 4 ,leghorn male hepatocellular cells ,long noncoding RNA ,RNA-seq ,apoptosis ,Microbiology ,QR1-502 - Abstract
Hepatitis-hydropericardium syndrome (HHS) is caused by fowl adenovirus serotype 4 (FAdV-4) and has resulted in considerable economic losses to the poultry industry globally. FAdV-4 elicits apoptosis in host cells. Long noncoding RNAs (lncRNAs) have emerged as important regulatory RNAs with profound effects on various biological processes, including apoptosis. However, it remains unknown whether lncRNAs participate in FAdV-4-induced apoptosis. In this study, RNA sequencing was applied to determine the transcription of cellular lncRNA in leghorn male hepatocellular (LMH) cells infected with FAdV-4. Cellular RNA transcription analysis demonstrated that FAdV-4 infection elicited 1798 significantly differentially expressed (DE) lncRNAs in infected LMH cells at 24 h post-infection (hpi) compared to mock control infection. In addition, 2873 DE mRNAs were also found. Target prediction and analyses revealed that 775 DE lncRNAs whose 671 target mRNAs were among the DE mRNAs were involved in several signaling pathways, including the AMPK signaling pathway, p53 signaling pathway and insulin signaling pathway. From these 775 DE lncRNAs, we identified 71 DE lncRNAs related to apoptosis based on their target gene functions. Subsequently, lncRNA 54128 was selected from the 71 identified DE lncRNAs, and its role in FAdV-4-induced apoptosis was verified. LncRNA 54128 interference significantly suppressed the rate of apoptosis, which was accompanied by reduced BMP4 transcription levels. To the best of our knowledge, this is the first study to analyze host lncRNA transcription during FAdV-4 infection. Our findings provide a better understanding of host responses to FAdV-4 infection and provide new directions for understanding the potential association between lncRNAs and FAdV-4 pathogenesis.
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- 2021
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20. MicroRNA-218 Regulates Signaling Lymphocyte Activation Molecular (SLAM) Mediated Peste des Petits Ruminants Virus Infectivity in Goat Peripheral Blood Mononuclear Cells
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Xuefeng Qi, Ting Wang, Zhen Li, Yangli Wan, Bo Yang, Wei Zeng, Yanming Zhang, and Jingyu Wang
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MicroRNA-218 ,SLAM ,PPRV ,goat PBMCs ,innate immune response ,hemagglutinin protein ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Peste des petits ruminants virus (PPRV) has emerged as a significant threat to the productivity of small ruminants worldwide. SLAM was identified as the primary receptor for PPRV and other Morbilliviruses, although the regulation of SLAM expression is not yet fully understood. In this study, we revealed a novel mechanism by which PPRV upregulates its receptor SLAM expression and thereby benefits its replication via suppressing miR-218, a novel negative miRNA directly targeting SLAM gene. We demonstrated that PPRV infection downregulates miR-218, which in turn enhances SLAM expression on the surface of goat peripheral blood mononuclear cells (PBMCs), thus promoting PPRV replication. Since SLAM signaling may modulate the immune responses induced by PPRV infection, we further examined the effect of SLAM expression on the production of various cytokines by PBMCs in the absence or presence of PPRV. We demonstrated that miR-218-mediated SLAM expression modulates the expression of IFN-γ, TNF-α, and IL-10, importantly, these modulatory effects were enhanced in the presence of PPRV infection. Furthermore, our data clearly showed that PPRV H protein is sufficient to regulate miR-218-mediated SLAM expression. Taken together, our results suggest a novel mechanism involving post-transcriptional regulation of SLAM receptor expression on goat PBMCs during PPRV infection.
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- 2019
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21. Autophagy Benefits the Replication of Egg Drop Syndrome Virus in Duck Embryo Fibroblasts
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Xueping Wang, Xuefeng Qi, Bo Yang, Shuying Chen, and Jingyu Wang
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egg drop syndrome disease virus ,autophagy ,virus replication ,autophagic flux ,DEF cells ,Microbiology ,QR1-502 - Abstract
Egg drop syndrome virus (EDSV) is an economically important pathogen with a broad host range, and it causes disease that leads to markedly decreased egg production. Although EDSV is known to induce apoptosis in duck embryo fibroblasts (DEFs), the interaction between EDSV and its host needs to be further researched. Here, we provide the first evidence that EDSV infection triggers autophagy in DEFs through increases in autophagosome-like double-membrane vesicles, the conversion of LC3-I to LC3-II, and LC3 colocalization with viral hexon proteins. Conversely, P62/SQSTM1 degradation, LC3-II turnover, and colocalization of LAMP and LC3 confirmed that EDSV infection triggers complete autophagy. Furthermore, we demonstrated that inhibition of autophagy by chloroquine (CQ) and 3-methyladenine (3MA) or RNA interference targeting ATG-7 decreased the yield of EDSV progeny. In contrast, induction of autophagy by rapamycin increased the EDSV progeny yield. In addition, we preliminarily demonstrated that the class I phosphoinositide 3-kinase (PI3K)/Akt/mTOR pathway contributes to autophagic induction following EDSV infection. Altogether, these finding lead us to conclude that EDSV infection induces autophagy, which benefits its own replication in host cells. These findings provide novel insights into EDSV–host interactions.
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- 2018
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22. Peste des Petits Ruminants Virus Enters Caprine Endometrial Epithelial Cells via the Caveolae-Mediated Endocytosis Pathway
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Bo Yang, Xuefeng Qi, Hui Guo, Peilong Jia, Shuying Chen, Zhijie Chen, Ting Wang, Jingyu Wang, and Qinghong Xue
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PPRV ,entry ,caprine endometrial epithelial cells ,caveolin ,endocytosis ,Microbiology ,QR1-502 - Abstract
Peste des petits ruminants virus (PPRV) causes an acute and highly contagious disease of sheep and goats and has spread with alarming speed around the world. The pathology of Peste des petits ruminants is linked to retrogressive changes and necrotic lesions in lymphoid tissues and epithelial cells. However, the process of PPRV entry into host epithelial cells remains largely unknown. Here, we performed a comprehensive study of the entry mechanism of PPRV into caprine endometrial epithelial cells (EECs). We clearly demonstrated that PPRV internalization was inhibited by chloroquine and ammonium chloride, which elevate the pH of various organelles. However, PPRV entry was not affected by chlorpromazine and knockdown of the clathrin heavy chain in EECs. In addition, we found that the internalization of PPRV was dependent on dynamin and membrane cholesterol and was suppressed by silencing of caveolin-1. Macropinocytosis did not play a role, but phosphatidylinositol 3-kinase (PI3K) was required for PPRV internalization. Cell type and receptor-dependent differences indicated that PPRV entry into caprine fetal fibroblast cells (FFCs) occurred via a different route. Taken together, our findings demonstrate that PPRV enters EECs through a cholesterol-dependent caveolae-mediated uptake mechanism that is pH-dependent and requires dynamin and PI3K but is independent of clathrin. This potentially provides insight into the entry mechanisms of other morbilliviruses.
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- 2018
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23. Lipopolysaccharide Upregulated Intestinal Epithelial Cell Expression of Fn14 and Activation of Fn14 Signaling Amplify Intestinal TLR4-Mediated Inflammation
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Xuefeng Qi, Lijuan Qin, Ruijing Du, Yungang Chen, Mingzhu Lei, Meiyu Deng, and Jingyu Wang
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small intestinal epithelial cells ,TLR4 ,Fn14 ,TWAEK ,TNF-α ,lipopolysaccharide ,Microbiology ,QR1-502 - Abstract
TLR4 in intestinal epithelial cells has been shown both inflammatory and homeostatic roles following binding of its cognate ligand lipopolysaccharide (LPS). TWEAK-Fn14 axis plays an important role in pathologies caused by excessive or abnormal inflammatory responses. This study aimed to evaluate potential cross-talk between TLR4 and TWEAK/Fn14 system in porcine small intestinal epithelial cells. Our in vivo results showed that, compared with the age-matched normal control piglets, increased expression of Fn14 in epithelium and decreased TWEAK expression in lamina propria were detected in the small intestinal of piglets stimulated with LPS. Consistent with this finding, treatment with LPS increased the expression of Fn14 and TLR4 while decreased TWEAK expression in porcine small intestinal epithelial cell lines SIEC02. Interestingly, modulating Fn14 activation using agonistic anti-Fn14 decreased TLR4-mediated TNF-α production by SIEC02. In addition, pretreatment of LPS-stimulated SIEC02 with recombinant TWEAK protein suppresses the expression of Fn14 and TNF-α and inhibits the negative impact of LPS on the tight junctional protein occludin expression. In conclusion, this study demonstrates that the TWEAK-independent Fn14 activation augments TLR4-mediated inflammatory responses in the intestine of piglets. Furthermore, the TWEAK-dependent suppression of Fn14 signaling may play a role in intestinal homeostasis.
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- 2017
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24. Goat uterine DBA+ leukocytes differentiation and cytokines expression respond differently to cloned versus fertilized embryos.
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Lijuan Qin, Mingzhu Lei, Dandan Zhao, Aihua Wang, Yaping Jin, and Xuefeng Qi
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Medicine ,Science - Abstract
High rate of fetal mortality in ruminant somatic cell nuclear transfer (SCNT) pregnancies is due, at least in part, to immune-mediated abortion of fetuses. In the present study, goat uterine leukocytes were isolated by Dolichos biflorus agglutinin (DBA) coated magnetic beads, and with majority being were CD56+CD16- in phenotype with low levels of perforin and Granzyme B expression. The responses of the isolated cells to SCNT and in vitro fertilization (IVF) embryos conditioned mediums containing hormone steroids were compared by measuring their phenotype and cytokines expression. The results showed there was a 2-fold increase in the numbers of isolated uterine leukocytes after incubation with different conditioned mediums for 120 h. However, significantly lower percentage and absolute numbers of uterine CD56+CD16- leukocytes incubated with SCNT conditioned mediums were detected as compared with those incubated with IVF conditioned mediums (P < 0.05). The group treated with progesterone (P4) or the combination of P4 and 17β-estradiol (E2) were associated with significantly higher percentage and absolute numbers of CD56+CD16- cells as compared with those treated with E2 alone (P < 0.05). Furthermore, in the presence of steroids, the isolated leukocytes incubated with SCNT conditioned mediums associated with greater levels of IFN-γ secretion and expression, as well as lesser levels of VEGF, as compared with those treated with IVF conditioned mediums (P < 0.05). In conclusion, this study demonstrates that SCNT embryos have a profound effect on the phenotype expression of goat uterine DBA+ leukocytes, as well as the secretion and expression of IFN-γ and VEGF by these cells in vitro.
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- 2015
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25. A student trained convolutional neural network competing with a commercial AI software and experts in organ at risk segmentation
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Sophia L. Bürkle, Dejan Kuhn, Tobias Fechter, Gianluca Radicioni, Nanna Hartong, Martin T. Freitag, Xuefeng Qiu, Efstratios Karagiannis, Anca-Ligia Grosu, Dimos Baltas, Constantinos Zamboglou, and Simon K. B. Spohn
- Subjects
Prostate cancer ,Radiation treatment planning ,Auto segmentation ,Convolutional neural network ,Artificial intelligence ,Turing test ,Medicine ,Science - Abstract
Abstract This retrospective, multi-centered study aimed to improve high-quality radiation treatment (RT) planning workflows by training and testing a Convolutional Neural Network (CNN) to perform auto segmentations of organs at risk (OAR) for prostate cancer (PCa) patients, specifically the bladder and rectum. The objective of this project was to develop a clinically applicable and robust artificial intelligence (AI) system to assist radiation oncologists in OAR segmentation. The CNN was trained using manual contours in CT-datasets from diagnostic 68Ga-PSMA-PET/CTs by a student, then validated (n = 30, PET/CTs) and tested (n = 16, planning CTs). Further segmentations were generated by a commercial artificial intelligence (cAI) software. The ground truth were manual contours from expert radiation oncologists. The performance was evaluated using the Dice-Sørensen Coefficient (DSC), visual analysis and a Turing test. The CNN yielded excellent results in both cohorts and OARs with a DSCmedian > 0.87, the cAI resulted in a DSC > 0.78. In the visual assessment, 67% (bladder) and 75% (rectum) of the segmentations were rated as acceptable for treatment planning. With a misclassification rate of 45.5% (bladder) and 51.1% (rectum), the CNN passed the Turing test. The metrics, visual assessment and the Turing test confirmed the clinical applicability and therefore the support in clinical routine.
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- 2024
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26. Trans‐rectovesical pouch urethral‐sparing robotic‐assisted simple prostatectomy: A case series
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Xinnan Chen, Kangkang Zhao, Hao Wang, Chengwei Zhang, Lin Du, Wendi Wang, Tianyi Chen, Haixiang Qin, Xuefeng Qiu, Hongqian Guo, and Gutian Zhang
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ejaculation function ,large volume benign prostatic hyperplasia ,trans‐rectovesical pouch ,urethral‐sparing robotic‐assisted simple prostatectomy ,urethtal‐sparing ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Objective To detail a novel technique of robotic‐assisted simple prostatectomy that makes handling the gland protruding into the bladder neck easier and can preserve the urethra and retain ejaculation function as much as possible. Patients and methods This is a prospective case series. Clinical data of 17 male patients who had large volume (>80 mL) benign prostatic hyperplasia (BPH) were enrolled to undergo trans‐rectovesical pouch urethral‐sparing robotic‐assisted simple prostatectomy (usRASP). We adopted the approach through the space between the bladder neck and seminal vesicle to perform a usRASP that can avoid the detrusor skirt and fibrous matrix area of the retropubic prostate. Between the transitional zone and the peripheral zone of the large prostate, the hyperplastic prostatic gland tissue can be enucleated under direct vision while preserving the prostatic urethra and retaining the ejaculatory duct and bladder neck intact. All preoperative, perioperative and postoperative clinical data were collected, and descriptive analysis was performed. Results The median intravesical prostatic protrusion was 19.3 mm (8.5–32.2). The median operative time was 100 min (75–140), and the median estimated blood loss was 100 mL (10–500). The median time to catheter removal was 7 days (5–7), with a median postoperative hospital stay of 2 days (2–4). After at least 6‐month follow‐up, the median maximum urine flow rate and postvoid residual volume were 40.1 mL/s (12.7–52.4) and 15 mL (5–23), respectively; the median International Prostate Symptom Score and Quality of Life score were 0 (0–6.3) and 1 (0–3), respectively; and the median total prostate‐specific antigen was 0.84 ng/mL (0.15–1.01). All patients successfully underwent usRASP. Fifty‐eight percent of patients with normal ejaculation function before surgery can still retain normal ejaculation function. Conclusion We described a new approach to performing usRASP. This new method remarkably improved the voiding function, maintained antegrade ejaculation and did not increase the post‐operative complications.
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- 2024
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27. Quantitative Analysis of Virulent Duck Enteritis Virus Loads in Experimentally Infected Ducklings
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Xuefeng, Qi, Xiaoyan, Yang, Anchun, Cheng, Mingshu, Wang, Dekang, Zhu, and Renyong, Jia
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- 2008
28. Prediction of false-positive PI-RADS 5 lesions on prostate multiparametric MRI: development and internal validation of a clinical-radiological characteristics based nomogram
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Yongbing Cheng, Bo Fan, Yao Fu, Haoli Yin, Jiaming Lu, Danyan Li, Xiaogong Li, Xuefeng Qiu, and Hongqian Guo
- Subjects
Prostate cancer ,Biopsy ,Magnetic resonance imaging ,PI-RADS 5 ,Nomogram ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Background To develop a risk model including clinical and radiological characteristics to predict false-positive The Prostate Imaging Reporting and Data System (PI-RADS) 5 lesions. Methods Data of 612 biopsy-naïve patients who had undergone multiparametric magnetic resonance imaging (mpMRI) before prostate biopsy were collected. Clinical variables and radiological variables on mpMRI were adopted. Lesions were divided into the training and validation cohort randomly. Stepwise multivariate logistic regression analysis with backward elimination was performed to screen out variables with significant difference. A diagnostic nomogram was developed in the training cohort and further validated in the validation cohort. Calibration curve and receiver operating characteristic (ROC) analysis were also performed. Results 296 PI-RADS 5 lesions in 294 patients were randomly divided into the training and validation cohort (208 : 88). 132 and 56 lesions were confirmed to be clinically significant prostate cancer in the training and validation cohort respectively. The diagnostic nomogram was developed based on prostate specific antigen density, the maximum diameter of lesion, zonality of lesion, apparent diffusion coefficient minimum value and apparent diffusion coefficient minimum value ratio. The C-index of the model was 0.821 in the training cohort and 0.871 in the validation cohort. The calibration curve showed good agreement between the estimation and observation in the two cohorts. When the optimal cutoff values of ROC were 0.288 in the validation cohort, the sensitivity, specificity, PPV, and NPV were 90.6%, 67.9%, 61.7%, and 92.7% in the validation cohort, potentially avoiding 9.7% unnecessary prostate biopsies. Conclusions We developed and validated a diagnostic nomogram by including 5 factors. False positive PI-RADS 5 lesions could be distinguished from clinically significant ones, thus avoiding unnecessary prostate biopsy.
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- 2024
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29. Transcriptome Analysis Reveals the Potential Role of Long Noncoding RNAs in Regulating Fowl Adenovirus Serotype 4-Induced Apoptosis in Leghorn Male Hepatocellular Cells
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Xuefeng Qi, Xiaolan Hou, Ting Wang, Lulu Yang, Bo Wen, Xueping Wang, and Jingyu Wang
- Subjects
Male ,Carcinoma, Hepatocellular ,fowl adenovirus serotype 4 ,RNA-Seq ,Biology ,Serogroup ,Microbiology ,Article ,Pathogenesis ,Transcriptome ,Transcription (biology) ,Virology ,Cell Line, Tumor ,Animals ,long noncoding RNA ,Host Microbial Interactions ,Aviadenovirus ,Gene Expression Profiling ,Liver Neoplasms ,apoptosis ,RNA ,Long non-coding RNA ,QR1-502 ,Cell biology ,Infectious Diseases ,Gene Expression Regulation ,Liver ,Apoptosis ,RNA, Long Noncoding ,Signal transduction ,RNA-seq ,Chickens ,leghorn male hepatocellular cells - Abstract
Hepatitis-hydropericardium syndrome (HHS) is caused by fowl adenovirus serotype 4 (FAdV-4) and has resulted in considerable economic losses to the poultry industry globally. FAdV-4 elicits apoptosis in host cells. Long noncoding RNAs (lncRNAs) have emerged as important regulatory RNAs with profound effects on various biological processes, including apoptosis. However, it remains unknown whether lncRNAs participate in FAdV-4-induced apoptosis. In this study, RNA sequencing was applied to determine the transcription of cellular lncRNA in leghorn male hepatocellular (LMH) cells infected with FAdV-4. Cellular RNA transcription analysis demonstrated that FAdV-4 infection elicited 1798 significantly differentially expressed (DE) lncRNAs in infected LMH cells at 24 h post-infection (hpi) compared to mock control infection. In addition, 2873 DE mRNAs were also found. Target prediction and analyses revealed that 775 DE lncRNAs whose 671 target mRNAs were among the DE mRNAs were involved in several signaling pathways, including the AMPK signaling pathway, p53 signaling pathway and insulin signaling pathway. From these 775 DE lncRNAs, we identified 71 DE lncRNAs related to apoptosis based on their target gene functions. Subsequently, lncRNA 54128 was selected from the 71 identified DE lncRNAs, and its role in FAdV-4-induced apoptosis was verified. LncRNA 54128 interference significantly suppressed the rate of apoptosis, which was accompanied by reduced BMP4 transcription levels. To the best of our knowledge, this is the first study to analyze host lncRNA transcription during FAdV-4 infection. Our findings provide a better understanding of host responses to FAdV-4 infection and provide new directions for understanding the potential association between lncRNAs and FAdV-4 pathogenesis.
- Published
- 2021
30. Interactions Among Expressed MicroRNAs and mRNAs in the Early Stages of Fowl Adenovirus Aerotype 4-Infected Leghorn Male Hepatocellular Cells
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Ting Wang, Jingyu Wang, Jiaona Guo, Bo Yang, Xuefeng Qi, Bo Wen, and Ning Wu
- Subjects
Microbiology (medical) ,0303 health sciences ,030306 microbiology ,fowl adenovirus serotype 4 ,EGR1 ,lcsh:QR1-502 ,RNA-Seq ,Biology ,Molecular biology ,Microbiology ,In vitro ,lcsh:Microbiology ,03 medical and health sciences ,Adapter molecule crk ,Real-time polymerase chain reaction ,microRNA ,mRNA–miRNA integrate analysis ,entry ,SOCS3 ,RNA-seq ,leghorn male hepatocellular cells ,Loss function ,030304 developmental biology ,Original Research - Abstract
Hydropericardium-hepatitis syndrome (HHS) is caused by some strains of fowl adenovirus serotype 4 (FAdV-4). However, the mechanism of FAdV-4 entry is not well understood. Therefore, to investigate the changes in host cellular response at the early stage of FAdV-4 infection, a conjoint analysis of miRNA-seq and mRNA-seq was utilized with leghorn male hepatocellular (LMH) cells at 30, 60, and 120 min after FAdV-4 infection. In total, we identified 785 differentially expressed (DE) miRNAs and 725 DE mRNAs in FAdV-4-infected LMH cells. Most miRNAs and mRNAs, including gga-miR-148a-3p, gga-miR-148a-5p, gga-miR-15c-3p, CRK, SOCS3, and EGR1, have not previously been reported to be associated with FAdV-4 infection. The conjoint analysis of the obtained data identified 856 miRNA-mRNA pairs at three time points. The interaction network analysis showed that gga-miR-128-2-5p, gga-miR-7475-5p, novel_miR205, and TCF7L1 were located in the core of the network. Furthermore, the relationship between gga-miR-128-2-5p and its target OBSL1 was confirmed using a dual-luciferase reporter system and a real-time quantitative polymerase chain reaction assay. In vitro experiments revealed that both gga-miR-128-2-5p overexpression and OBSL1 loss of function inhibited FAdV-4 entry. These results suggested that gga-miR-128-2-5p plays an important role in FAdV-4 entry by targeting OBSL1. To the best of our knowledge, the present study is the first to analyze host miRNA and mRNA expression at the early stage of FAdV-4 infection; furthermore, the results of this study help to elucidate the molecular mechanisms of FAdV-4 entry.
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- 2020
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31. MicroRNA-1 Negatively Regulates Peripheral NK Cell Function via Tumor Necrosis Factor-Like Weak Inducer of Apoptosis (TWEAK) Signaling Pathways During PPRV Infection
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Zhen Li, Huan Li, Ting Wang, Xuefeng Qi, Jingyu Wang, and Yanming Zhang
- Subjects
lcsh:Immunologic diseases. Allergy ,medicine.medical_treatment ,Immunology ,NK cells ,Biology ,Virus Replication ,Models, Biological ,Peste-des-petits-ruminants virus ,Immune system ,Downregulation and upregulation ,TWEAK ,Peste-des-Petits-Ruminants ,medicine ,Immunology and Allergy ,Cytotoxic T cell ,Animals ,RNA, Messenger ,MicroRNA-1 ,Original Research ,Innate immune system ,Suppressor of cytokine signaling 1 ,Effector ,Tumor Necrosis Factor-alpha ,Goats ,goat ,Cytokine TWEAK ,Killer Cells, Natural ,MicroRNAs ,Cytokine ,Gene Expression Regulation ,Tumor necrosis factor alpha ,RNA Interference ,PPRV ,lcsh:RC581-607 ,Signal Transduction - Abstract
Peste des petits ruminants virus (PPRV) has emerged as a significant threat to the productivity of small ruminants worldwide. PPRV is lymphotropic in nature and induces in the hosts a transient but severe immunosuppression, especially innate immunity. However, it remains largely unknown how NK cells respond and are regulated at the earliest time points after an acute viral PPRV infection in goats. In this study, we revealed that multiple immune responses of goat peripheral NK cells were compromised during PPRV infection, including the cytolytic effector molecule expression and cytokine production. Importantly, we demonstrated that PPRV infection stimulated the expression of TWEAK, a negative regulator of cytotoxic function of NK cells, which may be involved in the suppression of cytotoxicity as well as cytokine production in infected goat NK cells. Furthermore, we found that PPRV infection induced TWEAK expression in goat NK cells involving post-transcription by suppressing miR-1, a novel negative miRNA directly targeting the TWEAK gene. Moreover, replication of virus is required for inhibition of miR-1 expression during PPRV infection, and the non-structural V protein of PPRV plays an important role in miR-1 mediated TWEAK upregulation. Additionally, we revealed that the regulation of NK cell immune responses by TWEAK is mediated by MyD88, SOCS1, and STAT3. Taken together, our results demonstrated that TWEAK may play a key role in regulating goat peripheral NK cell cytotoxicity and cytokine expression levels during PPRV infection.
- Published
- 2020
32. Autophagy enhances the replication of Peste des petits ruminants virus and inhibits caspase-dependent apoptosis in vitro
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Xueping Wang, Xuefeng Qi, Bo Yang, Jingyu Wang, Peilong Jia, Ting Wang, Shuying Chen, Tianxia Xue, and Qinghong Xue
- Subjects
0301 basic medicine ,Autophagosome ,Virus Replication ,Autophagy-Related Protein 7 ,Wortmannin ,Endometrium ,chemistry.chemical_compound ,Goats ,apoptosis ,Chloroquine ,Cell biology ,Infectious Diseases ,medicine.anatomical_structure ,Caspases ,Host-Pathogen Interactions ,Beclin-1 ,Female ,Research Paper ,Microbiology (medical) ,caprine endometrial epithelial cells (EECs) ,autophagy ,replication ,Immunology ,In Vitro Techniques ,Biology ,Peste des petits ruminants virus (PPRV) ,Microbiology ,Ammonium Chloride ,Caspase-Dependent Apoptosis ,Virus ,Peste-des-petits-ruminants virus ,lcsh:Infectious and parasitic diseases ,03 medical and health sciences ,Lysosome ,Peste-des-Petits-Ruminants ,medicine ,Animals ,Humans ,lcsh:RC109-216 ,Autophagy ,Autophagosomes ,Epithelial Cells ,Androstadienes ,Nucleoproteins ,030104 developmental biology ,chemistry ,Viral replication ,Apoptosis ,Parasitology ,Lysosomes ,Protein C - Abstract
Peste des petits ruminants (PPR) is an acute and highly contagious disease in small ruminants that causes significant economic losses in developing countries. An increasing number of studies have demonstrated that both autophagy and apoptosis are important cellular mechanisms for maintaining homeostasis, and they participate in the host response to pathogens. However, the crosstalk between apoptosis and autophagy in host cells during PPRV infection has not been clarified. In this study, autophagy was induced upon virus infection in caprine endometrial epithelial cells (EECs), as determined by the appearance of double- and single-membrane autophagy-like vesicles, LC3-I/LC3-II conversion, and p62 degradation. We also found that PPRV infection triggered a complete autophagic response, most likely mediated by the non-structural protein C and nucleoprotein N. Moreover, our results suggest that autophagy not only promotes the replication of PPRV in EECs but also provides a potential mechanism for inhibiting PPRV-induced apoptosis. Inhibiting autophagosome formation by wortmannin and knocking down the essential autophagic proteins Beclin-1 and ATG7 induces caspase-dependent apoptosis in EECs in PPRV infection. However, inhibiting autophagosome and lysosome fusion by NH4Cl and chloroquine did not increase the number of apoptotic cells. Collectively, these data are the first to indicate that PPRV-induced autophagy inhibits caspase-dependent apoptosis and thus contributes to the enhancement of viral replication and maturity in host cells.
- Published
- 2018
33. MicroRNA expression profiling of goat peripheral blood mononuclear cells in response to peste des petits ruminants virus infection
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Ting Wang, Xuefeng Qi, Bo Yang, Qinghong Xue, Jingyu Wang, and Zhen Li
- Subjects
0301 basic medicine ,China ,Goat PBMC ,[SDV]Life Sciences [q-bio] ,Differentially Expressed (DE) ,Biology ,Peripheral blood mononuclear cell ,Virus ,Peste-des-petits-ruminants virus ,03 medical and health sciences ,Peste-des-Petits-Ruminants ,microRNA ,Gene expression ,Animals ,PPRV Infection ,Regulation of gene expression ,Goat Diseases ,lcsh:Veterinary medicine ,General Veterinary ,Gene Expression Profiling ,Goats ,High-Throughput Nucleotide Sequencing ,Peste Des Petits Ruminants Virus (PPRV) ,Virology ,3. Good health ,Gene expression profiling ,MicroRNAs ,030104 developmental biology ,Gene Expression Regulation ,Viral replication ,miRNAs ,Leukocytes, Mononuclear ,lcsh:SF600-1100 ,Research Article - Abstract
Peste des petits ruminants virus (PPRV) belongs to the genus Morbillivirus that causes an acute and highly contagious disease in goats and sheep. Virus infection can trigger the change in the cellular microRNA (miRNA) expression profile, which play important post-transcriptional regulatory roles in gene expression and can greatly influence viral replication and pathogenesis. Here, we employed deep sequencing technology to determine cellular miRNA expression profile in goat peripheral blood mononuclear cells (PBMC) infected with Nigeria 75/1 vaccine virus, a widely used vaccine strain for mass vaccination programs against Peste des petits ruminants. Expression analysis demonstrated that PPRV infection can elicit 316 significantly differentially expressed (DE) miRNA including 103 known and 213 novel miRNA candidates in infected PBMC at 24 hours post-infection (hpi) as compared with a mock control. Target prediction and functional analysis of these DEmiRNA revealed significant enrichment for several signaling pathways including TLR signaling pathways, PI3K-Akt, endocytosis, viral carcinogenesis, and JAK-STAT signaling pathways. This study provides a valuable basis for further investigation of the roles of miRNA in PPRV replication and pathogenesis. Electronic supplementary material The online version of this article (10.1186/s13567-018-0565-3) contains supplementary material, which is available to authorized users.
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- 2018
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34. Biogas slurry change the transport and distribution of soil water under drip irrigation
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Haitao Wang, Xuefeng Qiu, Xiaoyang Liang, Hang Wang, and Jiandong Wang
- Subjects
Water and nitrogen ,Transport and distribution ,Infiltration ,Wetting front ,Morphological characteristics ,Agriculture (General) ,S1-972 ,Agricultural industries ,HD9000-9495 - Abstract
Biogas slurry (BS), waste water of energy production, holds potential as both an irrigation water resource and a liquid fertilizer source. Typically combined with water and mineral fertilizer at specific ratios, BS is applied in fields with drip irrigation systems to enhance crop growth. However, the soil water infiltration process with BS drip irrigation remains poorly understood, mainly owing to the BS's differing characteristics from conventional water sources. This study investigated the morphological characteristics, transport and distribution of water in three ratios of BS-water using a soil column experiment, with the post-irrigation surface soil pores and elements analyzed using electron microscopy and energy spectrum scanning techniques. The findings reveal that BS drip irrigation significantly alters the water morphological characteristics, transport process and distribution compared to conventional water sources. The morphology of the wetting-front changed from nearly ''hemispherical'' to a ''half-pear'' shape with time in BS drip irrigation. The soil-wetting front's vertical distance was notably smaller, approximately 50% of the vertical depth seen with traditional water source drip irrigation, even after redistribution of soil moisture, it was still difficult to reach the depth of the main root zone of most crops. Moreover, The carbon content on the soil surface was increased, ranging between 19.05–47.62% in the BS irrigation scenario, which led to soil pore blockage and a decrease in porosity ranging between 11.99–40.5%. The dynamic viscosity of BS is approximately 50% higher than that of CF.Theses indicate that the combined effect of soil porosity and dynamic viscosity affects the BS infiltration.In conclusion, this paper proposes a BS drip irrigation model with integrated agronomic measures to mitigate the potential adverse effects of BS drip irrigation caused by changes in soil water transportation and distribution.
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- 2024
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35. MicroRNA-218 Regulates Signaling Lymphocyte Activation Molecular (SLAM) Mediated Peste des Petits Ruminants Virus Infectivity in Goat Peripheral Blood Mononuclear Cells
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Yangli Wan, Zhen Li, Jingyu Wang, Xuefeng Qi, Bo Yang, Wei Zeng, Ting Wang, and Yanming Zhang
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lcsh:Immunologic diseases. Allergy ,0301 basic medicine ,Immunology ,Biology ,Peripheral blood mononuclear cell ,Peste-des-petits-ruminants virus ,hemagglutinin protein ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Signaling Lymphocytic Activation Molecule Family Member 1 ,goat PBMCs ,microRNA ,Peste-des-Petits-Ruminants ,Immunology and Allergy ,Animals ,Receptor ,Gene ,Original Research ,Infectivity ,Innate immune system ,Goat Diseases ,MicroRNA-218 ,Goats ,Virology ,MicroRNAs ,030104 developmental biology ,Gene Expression Regulation ,SLAM ,innate immune response ,Leukocytes, Mononuclear ,Cytokines ,PPRV ,lcsh:RC581-607 ,030215 immunology ,Signal Transduction - Abstract
Peste des petits ruminants virus (PPRV) has emerged as a significant threat to the productivity of small ruminants worldwide. SLAM was identified as the primary receptor for PPRV and other Morbilliviruses, although the regulation of SLAM expression is not yet fully understood. In this study, we revealed a novel mechanism by which PPRV upregulates its receptor SLAM expression and thereby benefits its replication via suppressing miR-218, a novel negative miRNA directly targeting SLAM gene. We demonstrated that PPRV infection downregulates miR-218, which in turn enhances SLAM expression on the surface of goat peripheral blood mononuclear cells (PBMCs), thus promoting PPRV replication. Since SLAM signaling may modulate the immune responses induced by PPRV infection, we further examined the effect of SLAM expression on the production of various cytokines by PBMCs in the absence or presence of PPRV. We demonstrated that miR-218-mediated SLAM expression modulates the expression of IFN-γ, TNF-α, and IL-10, importantly, these modulatory effects were enhanced in the presence of PPRV infection. Furthermore, our data clearly showed that PPRV H protein is sufficient to regulate miR-218-mediated SLAM expression. Taken together, our results suggest a novel mechanism involving post-transcriptional regulation of SLAM receptor expression on goat PBMCs during PPRV infection.
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- 2019
36. A novel current-limiting method for MMC-HVDC by coordinating virtual impedance control and fault current limiter
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Lei Chen, Zekai Zhao, Xuefeng Qiao, Guocheng Li, and Hongkun Chen
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Current-limiting method ,MMC-HVDC ,DC fault ,Fault current limiter ,Virtual impedance control ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
The modular multilevel converter (MMC) topology is very suitable for high voltage direct current (HVDC) system to achieve feasible power control, favorable black start capability as well as long-distance power transmission. This paper proposes a novel current-limiting method based on the coordination of virtual impedance control (VIC) and resistive fault current limiter (R-FCL) for MMC-HVDC, and it aims to effectively decrease the DC fault current level and assist the DC circuit breaker (DCCB) to remove the fault reliably and smoothly. Firstly, the MMC-HVDC’s topology and control strategy are expounded, and the modeling method of the VIC and the R-FCL is presented. According to the DC fault evolution, the time sequence coordination scheme of the VIC and the R-FCL for the MMC-HVDC is put forward. Then, considering the introduction of the proposed current-limiting method, the fault characteristics of the MMC-HVDC are theoretically deduced, and the capacity design of the VIC and the R-FCL is conducted. Using MATLAB, a typical ±320 kV MMC-HVDC system with VIC, R-FCL, and DCCB is built, and comparative simulations are performed. The results indicate the proposed approach can strongly limit the DC fault current within the acceptable range, and reduce the electrical stress and thermal stress in the MMC and DCCB. The proposed approach possesses better techno-economics than the R-FCL alone to solve the DC fault problem, and a more efficient protection of the MMC-HVDC is realized.
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- 2022
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37. Five-Band Tunable Terahertz Metamaterial Absorber Using Two Sets of Different-Sized Graphene-Based Copper-Coin-like Resonators
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Jieru Wang, Xuefeng Qin, Qian Zhao, Guiyuan Duan, and Ben-Xin Wang
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terahertz metamaterials ,graphene-based copper-coin-like resonator ,multi-band absorption ,tunable absorption properties ,Applied optics. Photonics ,TA1501-1820 - Abstract
In this paper, a five-band metamaterial absorber with a tunable function in a terahertz band is proposed, which consists of a gold grounding layer, a polyimide dielectric layer, and a periodic patterned graphene layer. The patterned graphene layer is constructed from two sets of copper-coin-shaped structures of different sizes. The designed absorber achieves absorptions of 96.4%, 99.4%, 99.8%, 98.4%, and 99.9% at 4.62 THz, 7.29 THz, 7.70 THz, 8.19 THz, and 8.93 THz, respectively, with an average absorption intensity of 98.78%. The physical mechanism of this five-band absorber was explained by the impedance matching principle and electric field distribution. The absorption performance of the five-band absorber can be effectively tuned by changing the geometry of the patterned graphene array and the thickness of the dielectric layer. Given that the resonant frequency of the absorber varies in proportion to the Fermi level, by varying the Fermi level of the graphene hypersurface, we can achieve the continuous tuning of the absorption performance over a wide frequency range. The five-band absorber has a stable absorption performance over a wide incidence angle of 0–65°, and by combining the merits of high absorption, dynamic adjustability, and a large number of absorption peaks, the given absorber could have great potential for applications in nondestructive testing, imaging, communication, sensing, and detectors.
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- 2024
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38. circCYP24A1 promotes Docetaxel resistance in prostate Cancer by Upregulating ALDH1A3
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Haoli Yin, Haixiang Qin, Lei Yang, Mengxia Chen, Yang Yang, Wenlong Zhang, Jiange Hao, Qun Lu, Jingyan Shi, Junlong Zhuang, Xuefeng Qiu, and Hongqian Guo
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Prostate cancer ,circCYP24A1 ,miR-1301-3p ,ALDH1A3 ,Docetaxel resistance ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Abstract Background Docetaxel (DTX) is the most widely prescribed first-line chemotherapy for advanced prostate cancer (PCa). Unfortunately, DTX resistance invariably emerges, leading to worse prognosis of PCa. Growing evidence has shown that circRNAs had complex spatiotemporal specificity during the tumor development and oncogenesis. This study was designed to investigate the biological functions and possible molecular mechanisms of circRNAs in DTX resistance of PCa. Methods circRNAs in established DTX-resistant DU145 cell line were identified by RNA sequencing. Biological function of circCYP24A1 was verified in vitro and in vivo. The potential role of circCYP24A1 in the development of DTX-resistant PCa was investigated via dual-luciferase reporter assays, RIP assays and RNA pull-down assays. Univariate and multivariate logistic regression analyses was used to predict DTX-chemotherapy response based on patients’ clinical and biological information. Results CircCYP24A1 was identified to be upregulated in DTX-resistant DU145 cells. Upregulated circCYP24A1 was found to suppress the DTX chemosensitivity in vitro and in vivo. Furthermore, we found that circCYP24A1 promoted DTX resistance in PCa via regulating ALDH1A3 expression by sponging miR-1301-3p and activating PI3K/AKT/mTOR signaling pathway. Statistical analyses elucidated that circCYP24A1 was an independent risk factor to predict DTX response (OR = 0.165; 95% CI: 0.038–0.723; P = 0.017). Conclusions This study demonstrated that circCYP24A played an essential role in DTX resistance in PCa, suggesting that circCYP24A1 could be a promising biomarker to predict DTX response and a potential therapeutic target in PCa patients resistant to DTX chemotherapy.
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- 2022
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39. Androgen deprivation therapy plus abiraterone or docetaxel as neoadjuvant therapy for very-high-risk prostate cancer: a pooled analysis of two phase II trials
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Junlong Zhuang, Yuwen Wang, Shun Zhang, Yao Fu, Haifeng Huang, Xiaoyu Lyu, Shiwei Zhang, Giancarlo Marra, Linfeng Xu, Xuefeng Qiu, and Hongqian Guo
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prostate cancer ,neoadjuvant therapy ,abiraterone ,docetaxel ,radical prostatectomy ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Objective: The study aimed to compare the efficacy and safety of androgen deprivation therapy (ADT) with abiraterone or docetaxel versus ADT alone as neoadjuvant therapy in patients with very-high-risk localized prostate cancer.Methods: This was a pooled analysis of two single-center, randomized, controlled, phase II clinical trials (ClinicalTrials.gov: NCT04356430 and NCT04869371) conducted from December 2018 to March 2021. Eligible participants were randomly assigned to the intervention (ADT plus abiraterone or docetaxel) and control (ADT alone) groups at a 2:1 ratio. Efficacy was evaluated by pathological complete response (pCR), minimal residual disease (MRD), and 3-year biochemical progression-free survival (bPFS). Safety was also analyzed.Results: The study included 42 participants in the ADT group, 47 in the ADT plus docetaxel group, and 48 in the ADT plus abiraterone group. A total of 132 (96.4%) participants had very-high-risk prostate cancer, and 108 (78.8%) had locally advanced disease. The ADT plus docetaxel group (28%) and ADT plus abiraterone group (31%) had higher rates of pCR or MRD (p = 0.001 and p < 0.001) compared with the ADT group (2%). The 3-year bPFS was 41.9% (95% CI: 26.6–57.2), 51.1% (95% CI: 36.8–65.4), and 61.2% (95% CI: 45.5–76.9), respectively. Significant difference was found among groups in terms of bPFS (p = 0.037).Conclusion: Compared with ADT alone, neoadjuvant therapy with ADT plus docetaxel or abiraterone could achieve better pathological outcomes (pCR or MRD) for very-high-risk localized prostate cancer. The ADT plus abiraterone group showed longer bPFS than ADT alone. The combination regimens were tolerable.
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- 2023
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40. Pan-cancer analysis identifies LMNB1 as a target to redress Th1/Th2 imbalance and enhance PARP inhibitor response in human cancers
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Haixiang Qin, Yingqiang Lu, Lin Du, Jingyan Shi, Haoli Yin, Bo Jiang, Wei Chen, Wenli Diao, Meng Ding, Wenmin Cao, Xuefeng Qiu, Xiaozhi Zhao, and Hongqian Guo
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LMNB1 ,Pan-cancer ,Survival ,Immune infiltration ,Homologous recombination repair ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Cytology ,QH573-671 - Abstract
Abstract Background Emerging evidence suggests that LMNB1 is involved in the development of multiple cancer types. However, there is no study reporting the potential role of LMNB1 in a systematic pan-cancer manner. Methods The gene expression level and potential oncogenic roles of LMNB1 in The Cancer Genome Atlas (TCGA) database were analyzed with Tumor Immune Estimation Resource version 2 (TIMER2.0), Gene Expression Profiling Interactive Analysis version 2 (GEPIA2), UALCAN and Sangerbox tools. Pathway enrichment analysis was carried out to explore the possible mechanism of LMNB1 on tumorigenesis and tumor progression. The therapeutic effects of LMNB1 knockdown combined with PARP inhibition on human cancers were further investigated in vitro. Results LMNB1 upregulation is generally observed in the tumor tissues of most TCGA cancer types, and is verified in kidney renal clear cell carcinoma using clinical specimens of our institute. High level of LMNB1 expression usually predicts poor overall survival and disease free survival for patients with tumors. Mechanically, LMNB1 level is positively correlated with CD4+ Th2 cell infiltration and DNA homologous recombination repair gene expression. In vitro experiments reveal that targeting LMNB1 has a synergistic effect on prostate cancer with PARP inhibitor treatment. Conclusions LMNB1 is a biomarker of CD4+ Th2 cell infiltration and DNA homologous recombination repair in human cancers. Blockage of LMNB1 combined with PARP inhibitor treatment could be a promising therapeutic strategy for patients with cancers.
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- 2022
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41. Coordination of mode switching control and SMES unit for low‐voltage ride‐through fulfillment of power electronic transformer
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Lei Chen, Xuefeng Qiao, Zekai Zhao, Xuechun Wang, Hongkun Chen, Yanhong Li, Md. Rabiul Islam, Xinyi Deng, and Guocheng Li
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DC‐link stabilization ,low‐voltage ride‐through ,mode switching control ,power electronic transformer ,superconducting magnetic energy storage ,Technology ,Science - Abstract
Abstract Power electronic transformer (PET) should have a satisfying low‐voltage ride‐through (LVRT) ability to cope with different kinds and severities of voltage sags. To solve the LVRT issue, this paper proposes to coordinate mode switching control (MSC) and superconducting magnetic energy storage (SMES), and it is to realize the targets of promoting voltage recovery, keeping DC‐link stabilization, and alleviating current inrush. First, the theoretical modeling of a PET incorporating with a SMES unit is implemented, and the PET’s fault transient characterizes as well as the SMES’s potential supportability is analyzed. Then, the coordination philosophy of the MSC and the SMES is presented. For that the voltage sag reaches a certain threshold, the MSC is enabled to remove the PET’s normal control, and the SMES collaboratively operates to lower the DC‐link overvoltage, while avoiding the PET damage. In the process of the coordination control handling the voltage transients, a proper reactive current injection is carried out at the PET’s output stage to assist the voltage recovery, and the PET can possess a better LVRT margin. Using MATLAB, a 3 MW PET with an 8 H/1.2 MJ SMES unit is modeled, and different voltage sag scenarios and utilization ways of the MSC and the SMES are simulated. The comparative analysis results show that the proposed approach realizes a satisfying LVRT for the PET.
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- 2022
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42. Second generation androgen receptor antagonist, TQB3720 abrogates prostate cancer growth via AR/GPX4 axis activated ferroptosis
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Zhongqing Zhang, Tianlei Xie, Shun Zhang, Haoli Yin, Xuyu Zhang, Siyuan Zhang, Wei Chen, Ding Yu, Xuefeng Qiu, Wei Zhao, Hongqian Guo, and Junlong Zhuang
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prostate cancer ,androgen receptor ,TQB3720 ,ferroptosis ,GPx4 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Purpose: Prostate cancer (PCa) poses a great threat to humans. The study aimed to evaluate the potential of TQB3720 in promoting ferroptosis to suppress prostate cancer, providing a theoretical basis for PCa therapy.Methods: PCa cells and nude mice models were divided into TQB3720, enzalutamide (ENZ), and control groups. Sulforhodamine B assay, colony formation assessment, organoids culture system, and the CCK8 assay were used for detecting proliferation. Western blot assay was processed to detect the expression of androgen receptor (AR), ferroptosis, and apoptosis-related genes. Flow cytometry was applied to measure the intracellular ROS levels. ELISA was performed to determine the cellular oxidized glutathione (GSSG) and malondialdehyde (MDA) levels. RT-qPCR was conducted to detect the mRNA expression of genes in AR signaling. BODIPYTM™ 581/591 was processed for detection of intracellular lipid peroxidation levels. The interaction of AR with other translational factor complex proteins was explored using Co-immunoprecipitation (Co-IP), and the chromatin immunoprecipitation (ChIP) assay was performed to detect the binding of AR-involved translational complex to downstream genes promoter. Luciferase reporter assay was conducted to examine the translation activity of GPX4 promoter, and immunohistochemistry (IHC) was conducted to analyze the levels of c-MYC, Ki-67 and AR in TQB3720-treated cancer tissues.Results: Here, we found TQB3720 inhibits the growth of prostate cancer in vitro and in vivo. TQB3720 treatment induced intracellular levels of GSSG and MDA significantly, by which hints AR antagonist caused ferroptosis-related cell death. Moreover, molecular evidence shown TQB3720 regulates downstream of AR signaling by binding AR resulting in inhibition of AR entry into the nucleus. Additional, we also proved that TQB3720 abrogates the interaction between AR and SP1 and leads to decrease GPX4 transcription.Conclusion: TQB3720 promotes ferroptosis in prostate cancer cells by reducing the AR/SP1 transcriptional complex binding to GPX4 promoter. As a result, it is suggested to be a potential drug for clinic prostate cancer treatment.
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- 2023
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43. A retrospective study to evaluate the effect of preoperative hormonal therapy on continence recovery
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Yuwen Wang, Shun Zhang, Haifeng Huang, Xuefeng Qiu, Yao Fu, Xiaoyu Lyu, Linfeng Xu, Junlong Zhuang, and Hongqian Guo
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hormonal therapy ,continence ,prostatectomy ,oligometastatic prostate cancer ,locally advanced prostate cancer ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
ObjectiveTo evaluate whether different preoperative hormonal therapy options affect postoperative continence and to identify risk/protective factors for continence recovery.MethodsThis is a retrospective analysis of several clinical trials (NCT04356430, NCT04869371, NCT04992026 and NCT05406999). Data from patients treated with hormonal therapy followed by RARP were collected and analyzed. Continence was defined as 0 pad/day or one safety pad.ResultsThe study included 230 patients with adequate information. The median time to continence recovery is 8 weeks. A total of 216 (93.9%) participants recovered to urinary continence within 12 months after surgery. 21 (9.1%) participants achieved immediate continence. 69, 85, 27 and 14 participants restored continence at 1 month, 1-3 month, 3-6 month, 6-12 month, accounting for 30.0%, 40.0%, 11.7% and 6.1% accordingly. No difference in continence recovery was found among different preoperative hormonal treatment options (p=0.821). Cox regression showed that membranous urethral length (MUL) was the only independent factor influencing urinary continence recovery either in the univariate analysis (OR=1.13, 95%CI: 1.04-1.22, p=0.002) or in the multivariate analysis (OR=1.12, 95%CI: 1.04-1.20, p=0.002). Different preoperative treatment options were not associated with urinary recovery. More advanced preoperative T stage (OR=0.46, 95%CI: 0.24-0.85, p=0.014) delayed the recovery of immediate continence. MUL was associated with continence restoring at 1 month (OR=1.20, 95%CI: 1.03-1.39, p=0.017), 3 month (OR=1.27, 95%CI: 1.07-1.51, p=0.006), 6 month (OR=1.34, 95%CI: 1.07-1.67, p=0.011) and 12 month (OR=1.36, 95%CI: 1.01-1.84, p=0.044).ConclusionThere is no difference in postoperative continence recovery among ADT, ADT+Docetaxel and ADT+Abiraterone preoperative treatment options. More advanced T stage indicated poor immediate continence recovery. Longer membranous urethral length was a promotional factor for both short-time and long-time continence recovery.
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- 2023
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44. Application of decellularized vascular matrix in small-diameter vascular grafts
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Yuanming Li, Ying Zhou, Weihua Qiao, Jiawei Shi, Xuefeng Qiu, and Nianguo Dong
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small-diameter vascular grafts ,decellularized vascular matrix ,tissue-engineered vascular grafts ,design criteria ,decellularization technologies ,commercialization ,Biotechnology ,TP248.13-248.65 - Abstract
Coronary artery bypass grafting (CABG) remains the most common procedure used in cardiovascular surgery for the treatment of severe coronary atherosclerotic heart disease. In coronary artery bypass grafting, small-diameter vascular grafts can potentially replace the vessels of the patient. The complete retention of the extracellular matrix, superior biocompatibility, and non-immunogenicity of the decellularized vascular matrix are unique advantages of small-diameter tissue-engineered vascular grafts. However, after vascular implantation, the decellularized vascular matrix is also subject to thrombosis and neoplastic endothelial hyperplasia, the two major problems that hinder its clinical application. The keys to improving the long-term patency of the decellularized matrix as vascular grafts include facilitating early endothelialization and avoiding intravascular thrombosis. This review article sequentially introduces six aspects of the decellularized vascular matrix as follows: design criteria of vascular grafts, components of the decellularized vascular matrix, the changing sources of the decellularized vascular matrix, the advantages and shortcomings of decellularization technologies, modification methods and the commercialization progress as well as the application prospects in small-diameter vascular grafts.
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- 2023
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45. Expanding tubular microvessels on stiff substrates with endothelial cells and pericytes from the same adult tissue
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Xiuyue Song, Yali Yu, Yu Leng, Lei Ma, Jie Mu, Zihan Wang, Yalan Xu, Hai Zhu, Xuefeng Qiu, Peifeng Li, Jing Li, and Dong Wang
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Biochemistry ,QD415-436 - Abstract
Endothelial cells (ECs) usually form a monolayer on two-dimensional (2D) stiff substrates and a tubular structure with soft hydrogels. The coculture models using ECs and pericytes derived from different adult tissues or pluripotent stem cells cannot mimic tissue-specific microvessels due to vascular heterogeneity. Our study established a method for expanding tubular microvessels on 2D stiff substrates with ECs and pericytes from the same adult tissue. We isolated microvessels from adult rat subcutaneous soft connective tissue and cultured them in the custom-made tubular microvascular growth medium on 2D stiff substrates (TGM2D). TGM2D promoted adult microvessel growth for at least 4 weeks and maintained a tubular morphology, contrary to the EC monolayer in the commercial medium EGM2MV. Transcriptomic analysis showed that TGM2D upregulated angiogenesis and vascular morphogenesis while suppressing oxidation and lipid metabolic pathways. Our method can be applied to other organs for expanding organ-specific microvessels for tissue engineering.
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- 2022
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46. Functional and oncologic outcomes of robot-assisted simple enucleation with and without renal arterial cold perfusion in complex renal tumors: a propensity score-matched analysis
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Qun Lu, Xiaozhi Zhao, Changwei Ji, Suhan Guo, Xuefeng Qiu, Guangxiang Liu, Shiwei Zhang, Xiaogong Li, Gutian Zhang, Xuebin Zhang, and Hongqian Guo
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Renal cell carcinoma ,Enucleation ,Robotic partial nephrectomy ,Perfusion ,Hypothermia ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Background To compare robot-assisted simple enucleation with renal arterial cold perfusion (RACP-RASE) and RASE alone in complex renal tumors with regard to perioperative, functional and oncologic outcomes by propensity score-matched analysis. Methods Data from 351 patients who underwent RACP-RASE or RASE for complex renal tumors were recorded between September 2014 and December 2017. Propensity score-matched analysis was performed on age, sex, BMI, ECOG score, tumor side and size, preoperative estimated glomerular filtration rate (eGFR), RENAL score and PADUA score. Results The study included 31 RACP-RASE and 320 RASE procedures. RENAL score and PADUA score were higher and tumor diameter was greater under RACP-RASE than RASE. After matching, the two groups were similar in estimated blood loss (208.3 vs 230.7 ml; p = 0.696) and ischemic time (34.8 vs 32.8 min; p = 0.342). The RACP-RASE group had significantly longer operative time than the RASE group (264.1 ± 55.7 vs 206.9 ± 64.0 min, p = 0.001). There was no difference in the incidence of postoperative complications between the two groups (13.8% vs 24.1%; p = 0.315), as was the overall incidence of positive surgical margins (3.4 vs 0%; p = 1.000). The changes in eGFR significantly differed between the two groups at 3 months (p = 0.018) and 12 months (p = 0.038). More patients in the RASE group were CKD upstaged (p = 0.043). At multivariable analysis, preoperative eGFR and the type of procedure were significant predictive factors for a change of more than 10% in eGFR at 3 months postoperatively. There was no local recurrence or distant metastasis during follow-up. Conclusions RACP-RASE is an effective and safe technique for complex renal tumors that can provide appropriate temporary arterial occlusion and renal hypothermic perfusion. Renal arterial cold perfusion may be helpful in protecting renal function in RASE as compared with warm ischemia.
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- 2021
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47. Chemical Coupled PEDOT:PSS/Si Electrode: Suppressed Electrolyte Consumption Enables Long-Term Stability
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Xuejiao Liu, Zhixin Xu, Asma Iqbal, Ming Chen, Nazakat Ali, CheeTongJohn Low, Rongrong Qi, Jiantao Zai, and Xuefeng Qian
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Conductive binder ,PEDOT:PSS ,Cross-link ,XPS depth analysis ,Stable SEI ,Lithium-ion batteries ,Technology - Abstract
Abstract Huge volume changes of Si during lithiation/delithiation lead to regeneration of solid-electrolyte interphase (SEI) and consume electrolyte. In this article, γ-glycidoxypropyl trimethoxysilane (GOPS) was incorporated in Si/PEDOT:PSS electrodes to construct a flexible and conductive artificial SEI, effectively suppressing the consumption of electrolyte. The optimized electrode can maintain 1000 mAh g−1 for nearly 800 cycles under limited electrolyte compared with 40 cycles of the electrodes without GOPS. Also, the optimized electrode exhibits excellent rate capability. The use of GOPS greatly improves the interface compatibility between Si and PEDOT:PSS. XPS Ar+ etching depth analysis proved that the addition of GOPS is conducive to forming a more stable SEI. A full battery assembled with NCM 523 cathode delivers a high energy density of 520 Wh kg−1, offering good stability.
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- 2021
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48. Machine Learning-Based Prediction of Pathological Upgrade From Combined Transperineal Systematic and MRI-Targeted Prostate Biopsy to Final Pathology: A Multicenter Retrospective Study
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Junlong Zhuang, Yansheng Kan, Yuwen Wang, Alessandro Marquis, Xuefeng Qiu, Marco Oderda, Haifeng Huang, Marco Gatti, Fan Zhang, Paolo Gontero, Linfeng Xu, Giorgio Calleris, Yao Fu, Bing Zhang, Giancarlo Marra, and Hongqian Guo
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prostate cancer ,biopsy ,upgrade ,prostatectomy ,prediction ,machine learning ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
ObjectiveThis study aimed to evaluate the pathological concordance from combined systematic and MRI-targeted prostate biopsy to final pathology and to verify the effectiveness of a machine learning-based model with targeted biopsy (TB) features in predicting pathological upgrade.Materials and MethodsAll patients in this study underwent prostate multiparametric MRI (mpMRI), transperineal systematic plus transperineal targeted prostate biopsy under local anesthesia, and robot-assisted laparoscopic radical prostatectomy (RARP) for prostate cancer (PCa) sequentially from October 2016 to February 2020 in two referral centers. For cores with cancer, grade group (GG) and Gleason score were determined by using the 2014 International Society of Urological Pathology (ISUP) guidelines. Four supervised machine learning methods were employed, including two base classifiers and two ensemble learning-based classifiers. In all classifiers, the training set was 395 of 565 (70%) patients, and the test set was the remaining 170 patients. The prediction performance of each model was evaluated by area under the receiver operating characteristic curve (AUC). The Gini index was used to evaluate the importance of all features and to figure out the most contributed features. A nomogram was established to visually predict the risk of upgrading. Predicted probability was a prevalence rate calculated by a proposed nomogram.ResultsA total of 515 patients were included in our cohort. The combined biopsy had a better concordance of postoperative histopathology than a systematic biopsy (SB) only (48.15% vs. 40.19%, p = 0.012). The combined biopsy could significantly reduce the upgrading rate of postoperative pathology, in comparison to SB only (23.30% vs. 39.61%, p < 0.0001) or TB only (23.30% vs. 40.19%, p < 0.0001). The most common pathological upgrade occurred in ISUP GG1 and GG2, accounting for 53.28% and 20.42%, respectively. All machine learning methods had satisfactory predictive efficacy. The overall accuracy was 0.703, 0.768, 0.794, and 0.761 for logistic regression, random forest, eXtreme Gradient Boosting, and support vector machine, respectively. TB-related features were among the most contributed features of a prediction model for upgrade prediction.ConclusionThe combined effect of SB plus TB led to a better pathological concordance rate and less upgrading from biopsy to RP. Machine learning models with features of TB to predict PCa GG upgrading have a satisfactory predictive efficacy.
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- 2022
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49. Retrospective study of quadratus lumborum block for postoperative analgesia in patients undergoing percutaneous nephrolithotomy
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Luning Chen, Jingjing Ji, Yali Tian, Qing Sun, Xuefeng Qiu, Xiaogong Li, and Bingbing Li
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Quadratus lumborum block ,Percutaneous nephrolithotomy ,Analgesia ,Postoperative ,Ultrasound-guided block ,Anesthesiology ,RD78.3-87.3 - Abstract
Abstract Background The postoperative analgesic effect of transmuscular quadratus lumborum block (QLB-TM) in patients following lower abdominal surgeries has been identified; however, the efficacy of QLB using the lateral approach (QLB-L) is still in debate. Therefore, this retrospective study was conducted to investigate the effect of a single-shot block with QLB-L on postoperative analgesia for patients undergoing percutaneous nephrolithotomy (PCNL). Methods The medical information of the patients undergoing PCNL was retrieved from the electronic charter system (Medisystem, Suzhou, China) in our Nanjing Drum Tower Hospital during the period of Jan/2019 to Jun/2019. Among the total of 57 patients, there are 17, 18, and 22 patients subjected to QLB-L, QLB-TM, or routine treatment, respectively. The primary observational parameter was to assess postoperative pain with visual analog scales (VAS) at rest 30 min after extubation, 24 h, and 48 h after surgery, respectively. The secondary observatory endpoints, including the consumption of intraoperative opioids, the cumulative dose of non-steroid anti-inflammatory drugs (NSAIDs) and the incidence of adverse events related to postoperative analgesia, were evaluated as well. Results The static VAS score at 24 h after surgery and the intraoperative consumption of sufentanil were significantly lower in patients receiving either intervention of QLB-L or QLB-TM as compared with those receiving routine treatment. However, one shot of QLB had no impact on VAS scores at 30 min post-extubation, 48 h after PCNL procedure compared with the patients receiving routine treatment. The percentage of non-ambulatory patients within 24 h post-PCNL was significantly higher in the QLB-TM group compared with the routine treatment group (P = 0.04). There were no significant differences in the incidence of postoperative nausea and vomit (PONV), itches, respiratory depression, the time for the first defecation, and the length of hospital stay (LOS) among the three groups. Conclusions QLB-L procedure may exert as equivalent as QLB-TM in terms of abrogating postoperative pain within 24 h post-surgery and decreasing intraoperative sufentanil consumption in patients undergoing PCNL procedure as well. The caution should be taken to avoid lower extremities weakness in the patients after QLB-TM within the first 24 h post-PCNL procedure.
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- 2020
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50. Nanoscale control of grain boundary potential barrier, dopant density and filled trap state density for higher efficiency perovskite solar cells
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Behzad Bahrami, Sally Mabrouk, Nirmal Adhikari, Hytham Elbohy, Ashim Gurung, Khan M. Reza, Rajesh Pathak, Ashraful H. Chowdhury, Gopalan Saianand, Wenjin Yue, Jiantao Zai, Xuefeng Qian, Mao Liang, and Qiquan Qiao
- Subjects
dopant density ,filled trap state density ,grain boundary potential barrier ,perovskite solar cells ,relative humidity ,Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Information technology ,T58.5-58.64 - Abstract
Abstract In this work, grain boundary (GB) potential barrier ( Δφ GB), dopant density (Pnet), and filled trap state density (PGB,trap) were manipulated at the nanoscale by exposing the fabricated perovskite films to various relative humidity (RH) environments. Spatial mapping of surface potential in the perovskite film revealed higher positive potential at GBs than inside the grains. The average Δφ GB, Pnet, and PGB,trap in the perovskite films decreased from 0% RH to 25% RH exposure, but increased when the RH increased to 35% RH and 45% RH. This clearly indicated that perovskite solar cells fabricated at 25% RH led to the lowest average GB potential, smallest dopant density, and least filled trap states density. This is consistent with the highest photovoltaic efficiency of 18.16% at 25% RH among the different relative humidities from 0% to 45% RH.
- Published
- 2020
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