107 results on '"Zaffagnini M"'
Search Results
2. Thioredoxin-dependent regulation of photosynthetic glyceraldehyde-3-phosphate dehydrogenase: autonomous vs. CP12-dependent mechanisms
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Trost, P., Fermani, S., Marri, L., Zaffagnini, M., Falini, G., Scagliarini, S., Pupillo, P., and Sparla, F.
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- 2006
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3. Redox regulation and dependence of oligomeric state of Populus trichocarpa plastidic P2-glucose-6P dehydrogenase by pH
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CARDI, MANUELA, ASCIONE, GIUSEPPINA, MONTI, SIMONA MARIA, ESPOSITO, SERGIO, Zaffagnini M, Rouhier N, Jacquot J. P, Chibani K, Federazione Italiana Scienze della Vita, Cardi, Manuela, Zaffagnini, M, Rouhier, N, Jacquot, J. P., Chibani, K, Ascione, Giuseppina, Monti, SIMONA MARIA, and Esposito, Sergio
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- 2012
4. Biochemical basis of sulphenomics: how protein sulphenic acids may be stabilized by the protein microenvironment.
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Trost, P., Fermani, S., Calvaresi, M., and Zaffagnini, M.
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SULFENIC acids ,CYSTEINE ,POST-translational modification ,REACTIVE oxygen species ,REACTIVE nitrogen species - Abstract
Among protein residues, cysteines are one of the prominent candidates to ROS-mediated and RNS-mediated post-translational modifications, and hydrogen peroxide (H
2 O2 ) is the main ROS candidate for inducing cysteine oxidation. The reaction with H2 O2 is not common to all cysteine residues, being their reactivity an utmost prerequisite for the sensitivity towards H2 O2 . Indeed, only deprotonated Cys (i.e. thiolate form, S− ) can react with H2 O2 leading to sulphenic acid formation (SOH), which is considered as a major/central player of ROS sensing pathways. However, cysteine sulphenic acids are generally unstable because they can be further oxidized to irreversible forms (sulphinic and sulphonic acids, SO2 H and SO3 H, respectively), or alternatively, they can proceed towards further modifications including disulphide bond formation (SS), S-glutathionylation (SSG) and sulphenamide formation (SN). To understand why and how cysteine residues undergo primary oxidation to sulphenic acid, and to explore the stability of cysteine sulphenic acids, a combination of biochemical, structural and computational studies are required. Here, we will discuss the current knowledge of the structural determinants for cysteine reactivity and sulphenic acid stability within protein microenvironments. [ABSTRACT FROM AUTHOR]- Published
- 2017
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5. Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site
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Couturier, J., Koh, C. S., Zaffagnini, M., Winger, A. M., Gualberto, J. M., Corbier, C., Decottignies, P., Jacquot, J. P., Lemaire, S. D., Didierjean, C., and Rouhier, N.
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3. Good health - Abstract
The journal of biological chemistry 284, 9299-9310 (2009). doi:10.1074/jbc.M807998200, Published by Soc., Bethesda, Md.
6. X-ray diffraction line broadening Fourier analysis of a metal matrix composite obtained by liquid infiltration
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Giunchi, G., Barbieri, F., Patuelli, C., and Zaffagnini, M.
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- 1991
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7. Austenite content and dislocation density in electron-beam welds of a stainless maraging steel
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Macek, K., Lukáš, P., Janovec, J., Mikula, P., Strunz, P., Vrána, M., and Zaffagnini, M.
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- 1996
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8. Mediator-free NADH photochemical regeneration with the aid of the amino acid l-cysteine
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Alberto Bianco, Mirko Zaffagnini, Giacomo Bergamini, Bianco, A, Zaffagnini, M, and Bergamini, G
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Fuel Technology ,Renewable Energy, Sustainability and the Environment ,NADH, Photocatalysis, Cysteine, Mediator Free ,Energy Engineering and Power Technology - Abstract
A strongly photoreducing ruthenium complex has been used to regenerate nicotinamide cofactor with only visible light and l-cysteine. The photoinduced processes have been deeply characterized, and the emission of NADH has been employed for the assessment of selectivity towards the enzymatically active photoregenerated cofactor.
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- 2022
9. Application of the SMALP technology to the isolation of GPCRs from low-yielding cell lines
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Rita Mazzoni, Maciej Maj, Manuela Bartolini, Krzysztof Jóźwiak, Artur Wnorowski, Paulina Malarczyk, Tiziana Benelli, Andrea Cingolani, Jakub Czapinski, Mirko Zaffagnini, Daniele Tedesco, Tedesco D., Maj M., Malarczyk P., Cingolani A., Zaffagnini M., Wnorowski A., Czapinski J., Benelli T., Mazzoni R., Bartolini M., and Jozwiak K.
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β2-adrenergic receptor ,?2-Adrenergic receptor ,Biophysics ,Styrene-maleic acid co-polymers ,Fractionation ,HEK293T cells ,styrene–maleic acid co-polymer ,Biochemistry ,law.invention ,Receptors, G-Protein-Coupled ,03 medical and health sciences ,law ,Membrane proteins ,GPCR solubilization ,Humans ,styrene–maleic acid co-polymers ,Cells, Cultured ,030304 developmental biology ,G protein-coupled receptor ,0303 health sciences ,Aqueous solution ,Chromatography ,Chemistry ,030302 biochemistry & molecular biology ,Extraction (chemistry) ,Maleates ,Biological membrane ,Cell Biology ,Lipids ,Membrane ,HEK293 Cells ,Ionic strength ,Membrane protein ,Recombinant DNA ,Polystyrenes - Abstract
Accepted Manuscript version. The Published Journal Article is available on Biochimica et Biophysica Acta (BBA) - Biomembranes, Volume 1863, Issue 9, Article number 183641 (DOI: https://doi.org/10.1016/j.bbamem.2021.183641). Supplementary Material available free of charge on the article webpage. © 2021. This Manuscript version is made available under the CC-BY-NC-ND 4.0 license. https://creativecommons.org/licenses/by-nc-nd/4.0/ ABSTRACT The ability of styrene–maleic acid (SMAc) co-polymers to spontaneously insert into biological membranes can be exploited to extract G protein-coupled receptors (GPCRs) embedded in styrene–maleic acid lipid particles (SMALPs), preserving the native environment around the protein and thus enhancing the feasibility 20 of functional studies. So far, the SMALP technology has been primarily employed on non-mammalian cells and protocols are not optimized for adherent human cell lines, which cannot be harvested in large amounts. In this work, a fine investigation of key parameters affecting the formation of SMALPs was undertaken with the purpose of maximizing the yield of extraction of a recombinant form of human β2-adrenergic receptor (rhβ2AR) from HEK293T cells. The study highlighted an important influence of ionic strength on the 25 membrane solubilization efficiency and GPCR purification yield of SMAc co-polymers: by lowering the salt concentration of all buffers used in previously published SMALP protocols, the water solubility and extraction efficiency of the selected SMAc co-polymer (commercially supplied as a potassium salt) were enhanced. In-line combination of size-exclusion chromatography (SEC) with immobilized metal affinity chromatography (IMAC) allowed further improvement of the final rhβ2AR yield by reducing the loss of 30 SMALP-embedded GPCRs during the fractionation and purification of SMALPs. The overall findings of this study show that the available SMALP protocols can be significantly optimized in several aspects in order to increase the efficiency of GPCR solubilization and isolation from low-yielding expression systems.
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- 2021
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10. Calvin–Benson cycle regulation is getting complex
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Libero Gurrieri, Francesca Sparla, Mirko Zaffagnini, Simona Fermani, Paolo Trost, Gurrieri L., Fermani S., Zaffagnini M., Sparla F., and Trost P.
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0106 biological sciences ,0301 basic medicine ,Cyanobacteria ,Dehydrogenase ,Plant Science ,Photosynthesis ,01 natural sciences ,protein complexe ,redox regulation ,03 medical and health sciences ,Magnoliopsida ,Thioredoxins ,stomatognathic system ,photosynthesi ,Light-independent reactions ,Thioredoxin ,Glyceraldehyde 3-phosphate dehydrogenase ,Regulation of gene expression ,Phosphoribulokinase ,biology ,Phototroph ,Glyceraldehyde-3-Phosphate Dehydrogenases ,food and beverages ,biology.organism_classification ,Glyceraldehyde-3-Phosphate Dehydrogenase ,eye diseases ,030104 developmental biology ,Biochemistry ,biology.protein ,sense organs ,metabolism ,010606 plant biology & botany - Abstract
Oxygenic phototrophs use the Calvin–Benson cycle to fix CO2 during photosynthesis. In the dark, glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK), two enzymes of the Calvin–Benson cycle, form an inactive complex with the regulatory protein CP12, mainly under the control of thioredoxins and pyridine nucleotides. In the light, complex dissociation allows GAPDH and PRK reactivation. The GAPDH/CP12/PRK complex is conserved from cyanobacteria to angiosperms and coexists in land plants with an autoassembling GAPDH that is analogously regulated. With the recently described 3D structures of PRK and GAPDH/CP12/PRK, the structural proteome of this ubiquitous regulatory system has been completed. This outcome opens a new avenue for understanding the regulatory potential of photosynthetic carbon fixation by laying the foundation for its knowledge-based manipulation.
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- 2021
11. Biomechanics of fibrous ligamentous tissues: volumetric analysis of microstructure under increasing strain
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G. Marchiori, G. Cassiolas, N. Sancisi, M. Berni, M. Conconi, S. Zaffagnini, M. Fini, N. F. Lopomo, A. Parrilli, F. Migliavacca, and G. Marchiori, G. Cassiolas, N. Sancisi, M. Berni, M. Conconi, S. Zaffagnini, M. Fini, N.F. Lopomo, A. Parrilli
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loads ,Ligament structure ,micro-CT - Abstract
Recently, an advanced experimental procedure has been proposed to highlight the close relationship existing between structure and function in fibrous materials [1], specifically focusing on Anterior Cruciate Ligament (ACL) tissue. A micro-CT system embedding a custom tensioning device was specifically used to acquire the fibrous tissue volume at the micro-scale, considering several levels of strain (i.e. 0÷8%); a biochemical contrasting process optimized fiber visualization and tissue mechanics preservation. After those experimental acquisition sessions [1], this study focused on image data processing and analysis, to identify “fiber” objects, hereinafter called fibers, and estimate mechanical properties, including their mean elastic modulus.
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- 2021
12. Plasticity in plastid redox networks: evolution of glutathione-dependent redox cascades and glutathionylation sites
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Stefanie J. Mueller-Schuessele, Finja A. Bohle, Jacopo Rossi, Paolo Trost, Andreas J. Meyer, Mirko Zaffagnini, Muller-Schussele S.J., Bohle F., Rossi J., Trost P., Meyer A.J., and Zaffagnini M.
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Plastid ,fungi ,Glutaredoxin ,Botany ,food and beverages ,Glutathione ,Evolution, Molecular ,Redox regulation ,QK1-989 ,Embryophyta ,Plastids ,Cysteine ,Protein S-glutathionylation ,Land plant evolution ,Streptophyta ,Oxidation-Reduction ,Phylogeny ,Research Article - Abstract
Background: Flexibility of plant metabolism is supported by redox regulation of enzymes via posttranslational modification of cysteine residues, especially in plastids. Here, the redox states of cysteine residues are partly coupled to the thioredoxin system and partly to the glutathione pool for reduction. Moreover, several plastid enzymes involved in reactive oxygen species (ROS) scavenging and damage repair draw electrons from glutathione. In addition, cysteine residues can be post-translationally modified by forming a disulfide with glutathione (S-glutathionylation), which protects thiol groups from further oxidation and can influence protein activity. However, the evolution of the plastid glutathione-dependent redox network in land plants and the conservation of cysteine residues undergoing S-glutathionylation is largely unclear.Results: We analysed the genomes of nine representative model species from streptophyte algae to angiosperms and find that the components of the plastid glutathione-dependent redox network are largely conserved, except for lambda- and the closely related iota-glutathione S-transferases. Screening the literature for target thiols of S-glutathionylation, we find that 151 plastid proteins have been identified as glutathionylation targets, while the exact cysteine residue is only known for 17% (26 proteins), with one or multiple sites per protein, resulting in 37 known S-glutathionylation sites for plastids. However, 38% (14) of the known sites were completely conserved in model species from green algae to flowering plants, with 22% (8) on non-catalytic cysteines. Variable conservation of the remaining sites indicates independent gains and losses of cysteines at the same position during land plant evolution.Conclusions: We conclude that the glutathione dependent redox network in plastids is highly conserved in streptophytes with some variability in scavenging and damage repair enzymes. Our analysis of cysteine conservation suggests that S-glutathionylation in plastids plays an important and yet under-investigated role in redox regulation and stress response.
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- 2021
13. Conservation of ethanol fermentation and its regulation in land plants
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Anna Mensuali, Mirko Zaffagnini, Jacopo Rossi, Pierdomenico Perata, Liem T. Bui, Françoise Corbineau, Antonietta Santaniello, Giacomo Novi, Cristina Iannuzzi, Lara Lombardi, Francesco Licausi, Beatrice Giuntoli, Scuola Universitaria Superiore Sant'Anna [Pisa] (SSSUP), University of Pisa - Università di Pisa, University of Bologna, Laboratoire de Biologie du Développement [Paris] (LBD), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Paris Seine (IBPS), Sorbonne Université (SU)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Bui L.T., Novi G., Lombardi L., Iannuzzi C., Rossi J., Santaniello A., Mensuali A., Corbineau F., Giuntoli B., Perata P., Zaffagnini M., and Licausi F.
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0106 biological sciences ,0301 basic medicine ,Physiology ,plant evolution ,Plant Science ,Ethanol fermentation ,7. Clean energy ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Arabidopsis ,Ethanol fuel ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] ,Alcohol dehydrogenase ,submergence ,biology ,Ethanol ,Chemistry ,hypoxia ,Acetaldehyde ,anoxia ,[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics ,15. Life on land ,biology.organism_classification ,Research Papers ,anaerobic metabolism ,Biological Evolution ,030104 developmental biology ,Biochemistry ,Fermentation ,fermentation ,biology.protein ,Embryophyta ,NAD+ kinase ,Pyruvate Decarboxylase ,Pyruvate decarboxylase ,010606 plant biology & botany ,Photosynthesis and Metabolism - Abstract
Ethanol fermentation is considered as one of the main metabolic adaptations to ensure energy production in higher plants under anaerobic conditions. Following this pathway, pyruvate is decarboxylated and reduced to ethanol with the concomitant oxidation of NADH to NAD+. Despite its acknowledgement as an essential metabolic strategy, the conservation of this pathway and its regulation throughout plant evolution have not been assessed so far. To address this question, we compared ethanol fermentation in species representing subsequent steps in plant evolution and related it to the structural features and transcriptional regulation of the two enzymes involved: pyruvate decarboxylase (PDC) and alcohol dehydrogenase (ADH). We observed that, despite the conserved ability to produce ethanol upon hypoxia in distant phyla, transcriptional regulation of the enzymes involved is not conserved in ancient plant lineages, whose ADH homologues do not share structural features distinctive for acetaldehyde/ethanol-processing enzymes. Moreover, Arabidopsis mutants devoid of ADH expression exhibited enhanced PDC activity and retained substantial ethanol production under hypoxic conditions. Therefore, we concluded that, whereas ethanol production is a highly conserved adaptation to low oxygen, its catalysis and regulation in land plants probably involve components that will be identified in the future., Transcriptional and biochemical comparisons in different phyla suggest the existence of alternative strategies of ethanol fermentation and its regulation in land plants.
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- 2019
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14. Assessment of human soft tissue microstructure under tensile load by using the Skyscan 1176 system: preliminary results
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G. Marchiori, G. Cassiolas, A. Parrilli, N. Sancisi, M. Berni, M. Conconi, S. Zaffagnini, M. Fini, N. F. Lopomo, and G. Marchiori, G. Cassiolas, A. Parrilli, N. Sancisi, M. Berni, M. Conconi, S. Zaffagnini, M. Fini, N.F. Lopomo
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Ligament, micro-ct, loads - Abstract
This study aimed to analyse the changes given by different levels of strain in the 3D microstructure of a fibrous soft tissue by using a microtomography system (micro-CT, Bruker Skyscan 1176) integrated with a custom-made tensioning device. Without loss of generality, the proposed approach was applied to the Anterior Cruciate Ligament. Two different samples were specifically analysed: a cadaveric tissue harvested by a healthy donor and a specimen obtained by a patient, who underwent total knee arthroplasty. Analysis was carried out by means of standard microtomographic procedures and focused on fiber orientation and stress-strain characteristic. Findings highlighted a clear difference in terms of fibrous density and arrangement between the two specimens. Besides providing proper mechanomicrostructural fingerprints for each human ligament/tendon and increasing the understanding on the effects of osteoarthritis on joint soft tissues, this approach can be useful also in tissue engineering, since it suggests correlation between tissue arrangements and mechanical behaviour
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- 2020
15. Structural and functional insights into nitrosoglutathione reductase from Chlamydomonas reinhardtii
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Christophe H. Marchand, Jacopo Rossi, Maria Meloni, Stéphane D. Lemaire, Giuseppe Falini, Andrea Tagliani, Daniele Tedesco, Simona Fermani, Paolo Trost, Mirko Zaffagnini, Gurrieri Libero, Marcello De Mia, Scuola Universitaria Superiore Sant'Anna [Pisa] (SSSUP), Laboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes (LBMCE), Institut de biologie physico-chimique (IBPC (FR_550)), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Physiologie cellulaire et végétale (LPCV), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Grenoble Alpes (UGA), University of Bologna, Biologie Computationnelle et Quantitative = Laboratory of Computational and Quantitative Biology (LCQB), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Paris Seine (IBPS), Sorbonne Université (SU)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Gestionnaire, HAL Sorbonne Université 5, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), University of Bologna/Università di Bologna, Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Tagliani A., Rossi J., Marchand C.H., De Mia M., Tedesco D., Gurrieri L., Meloni M., Falini G., Trost P., Lemaire S.D., Fermani S., and Zaffagnini M.
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0301 basic medicine ,Chlamydomona ,Clinical Biochemistry ,Chlamydomonas reinhardtii ,Oxidative phosphorylation ,Reductase ,Nitric Oxide ,Biochemistry ,Isozyme ,03 medical and health sciences ,0302 clinical medicine ,[CHIM] Chemical Sciences ,[CHIM]Chemical Sciences ,Cysteine ,lcsh:QH301-705.5 ,chemistry.chemical_classification ,Nitrosoglutathione reductase ,lcsh:R5-920 ,biology ,Organic Chemistry ,Chlamydomonas ,Thiol modification ,[SDV.SP]Life Sciences [q-bio]/Pharmaceutical sciences ,biology.organism_classification ,Aldehyde Oxidoreductases ,[SDV.SP] Life Sciences [q-bio]/Pharmaceutical sciences ,Zinc ions ,030104 developmental biology ,Enzyme ,lcsh:Biology (General) ,chemistry ,Redox regulation ,S-Nitrosoglutathione ,Thiol ,Nitrosoglutathione ,NAD+ kinase ,lcsh:Medicine (General) ,Oxidoreductases ,030217 neurology & neurosurgery ,Research Paper - Abstract
Protein S-nitrosylation plays a fundamental role in cell signaling and nitrosoglutathione (GSNO) is considered as the main nitrosylating signaling molecule. Enzymatic systems controlling GSNO homeostasis are thus crucial to indirectly control the formation of protein S-nitrosothiols. GSNO reductase (GSNOR) is the key enzyme controlling GSNO levels by catalyzing its degradation in the presence of NADH. Here, we found that protein extracts from the microalga Chlamydomonas reinhardtii catabolize GSNO via two enzymatic systems having specific reliance on NADPH or NADH and different biochemical features. Scoring the Chlamydomonas genome for orthologs of known plant GSNORs, we found two genes encoding for putative and almost identical GSNOR isoenzymes. One of the two, here named CrGSNOR1, was heterologously expressed and purified. Its kinetic properties were determined and the three-dimensional structures of the apo-, NAD+- and NAD+/GSNO-forms were solved. These analyses revealed that CrGSNOR1 has a strict specificity towards GSNO and NADH, and a conserved folding with respect to other plant GSNORs. The catalytic zinc ion, however, showed an unexpected variability of the coordination environment. Furthermore, we evaluated the catalytic response of CrGSNOR1 to thermal denaturation, thiol-modifying agents and oxidative modifications as well as the reactivity and position of accessible cysteines. Despite being a cysteine-rich protein, CrGSNOR1 contains only two solvent-exposed/reactive cysteines. Oxidizing and nitrosylating treatments have null or limited effects on CrGSNOR1 activity and folding, highlighting a certain resistance of the algal enzyme to redox modifications. The molecular mechanisms and structural features underlying the response to thiol-based modifications are discussed., Highlights • Chlamydomonas protein extracts catalyze NAD(P)H-dependent GSNO degradation. • Chlamydomonas GSNOR1 is a zinc-containing protein strictly relying on GSNO and NADH. • The 3D-structure of CrGSNOR1 revealed a conserved folding with other plant GSNORs. • CrGSNOR1 contains only two solvent-exposed/reactive cysteines. • Oxidizing and nitrosylating treatments have limited effects on CrGSNOR1 activity.
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- 2020
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16. Thioredoxin and Glutaredoxin Systems Antioxidants Special Issue
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Mirko Zaffagnini, Jean-Pierre Jacquot, Jacquot, Jean-Pierre, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Dept Pharm & Biotechnol, Lab Mol Plant Physiol, Università di Bologna, Jacquot J.-P., Zaffagnini M., and Université de Lorraine (UL)-Institut National de la Recherche Agronomique (INRA)
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0303 health sciences ,Physiology ,Experimental model ,[SDV]Life Sciences [q-bio] ,Clinical Biochemistry ,Library science ,Cell Biology ,Biochemistry ,Experimental research ,thioredoxine ,03 medical and health sciences ,Editorial ,0302 clinical medicine ,Thioredoxin, Glutaredoxin, Redox regulation, Thioredoxin reductase, Glutathione, Reactive oxygen species (ROS), Reactive nitrogen species (RNS), CO2 fixation, Chloroplast, Iron sulfur assembly, Mitochondria ,glutarédoxine ,Glutaredoxin ,Political science ,organisme phototrophe ,Thioredoxin ,Molecular Biology ,bioinformatique ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
The special issue on Thioredoxin and Glutaredoxin systems (https://www.mdpi.com/journal/antioxidants/special_issues/Thioredoxin_and_Glutaredoxin_Systems) was initiated in response to solicitations from Antioxidants after discussing with colleagues at two successive redox meetings sponsored by European Molecular Biology Organization (EMBO) and held in July 2017 in Moscow/St. Petersburg (http://redox.vub.ac.be/events/embo-redox-biology-conference.html) and in September of the same year in San Feliu de Guixols (Spain) (http://meetings.embo.org/event/17-thiol-ox).[br/] We could then submit the idea to long time collaborators and redox friends but also to other colleagues with whom we had the chance to get in touch with at these meetings. In general, although Antioxidants is a rather recent creation and its credentials were at the time not so well known, the idea of participating in a special issue was very well received and many of the contacted colleagues have answered positively.[br/] Of course, as our background is in plant sciences, this special issue mostly contains papers dealing with oxygenic phototrophs but other experimental model organisms are also addressed (bacteria, mammals, zebrafish, etc.). Overall the special issue contains 16 papers, 12 of those reporting experimental research data, and 4 others being more review-like although some of them also contain original bioinformatics data.
- Published
- 2019
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17. Glutathionylation primes soluble glyceraldehyde-3-phosphate dehydrogenase for late collapse into insoluble aggregates
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Marco Montalti, Mirko Zaffagnini, Stéphane D. Lemaire, Giovanni Venturoli, Marco Malferrari, Samuel Murail, Simona Fermani, Damiano Genovese, Paolo Trost, Christophe H. Marchand, Sara Bonacchi, Giuseppe Falini, Marc Baaden, Zaffagnini M., Marchand C.H., Malferrari M., Murail S., Bonacchi S., Genovese D., Montalti M., Venturoli G., Falini G., Baaden M., Lemaire S.D., Fermani S., and Trost P.
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Protein Folding ,Arabidopsis ,S-glutathionylation ,Dehydrogenase ,Molecular Dynamics Simulation ,Protein aggregation ,chemistry.chemical_compound ,Thioredoxins ,Oxidoreductase ,Catalytic Domain ,Glutaredoxin ,Cysteine ,S-Glutathionylation ,Glutaredoxins ,Glyceraldehyde 3-phosphate dehydrogenase ,chemistry.chemical_classification ,Multidisciplinary ,Disulfide bond ,Glutathione Disulfide ,biology ,Arabidopsis Proteins ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Molecular Sequence Annotation ,Glutathione ,Biological Sciences ,Kinetics ,Glyceraldehyde-3-phosphate dehydrogenase ,Solubility ,chemistry ,Biophysics ,biology.protein ,Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating) ,Oxidation-Reduction - Abstract
Protein aggregation is a complex physiological process, primarily determined by stress-related factors revealing the hidden aggregation propensity of proteins that otherwise are fully soluble. Here we report a mechanism by which glycolytic glyceraldehyde-3-phosphate dehydrogenase of Arabidopsis thaliana (AtGAPC1) is primed to form insoluble aggregates by the glutathionylation of its catalytic cysteine (Cys149). Following a lag phase, glutathionylated AtGAPC1 initiates a self-aggregation process resulting in the formation of branched chains of globular particles made of partially misfolded and totally inactive proteins. GSH molecules within AtGAPC1 active sites are suggested to provide the initial destabilizing signal. The following removal of glutathione by the formation of an intramolecular disulfide bond between Cys149 and Cys153 reinforces the aggregation process. Physiological reductases, thioredoxins and glutaredoxins, could not dissolve AtGAPC1 aggregates but could efficiently contrast their growth. Besides acting as a protective mechanism against overoxidation, S-glutathionylation of AtGAPC1 triggers an unexpected aggregation pathway with completely different and still unexplored physiological implications.
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- 2019
18. Plastidic P2 glucose-6P dehydrogenase from poplar is modulated by thioredoxin m-type: Distinct roles of cysteine residues in redox regulation and NADPH inhibition
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Sergio Esposito, Daniela Castiglia, Nicolas Rouhier, José M. Gualberto, Kamel Chibani, Alessia De Lillo, Manuela Cardi, Mirko Zaffagnini, Jean-Pierre Jacquot, Interactions Arbres-Microorganismes (IAM), Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Institut de biologie moléculaire des plantes (IBMP), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS), Dipartimento Biol, University of Naples Federico II, Dipartimento Farm & Biotecnol, University of Bologna, Université de Lorraine (UL)-Institut National de la Recherche Agronomique (INRA), Central European Institute of Technology [Brno] (CEITEC), Université de Strasbourg (UNISTRA), Legge Regionale della Campania CUP E69D15000270002, 5/2002, French Ministry of Foreign Affairs 672700K, Project FORGIARE (Formazione Giovani alla Ricerca) by Compagnia di San Paolo V-10/FORG/ST/2012/5, French National Research Agency (ANR) as part of the 'Investissements d'Avenir' program (Lab of Excellence ARBRE) UMR1136 ANR-11-LABX-0002-01, Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Central European Institute of Technology [Brno] (CEITEC MU), Brno University of Technology [Brno] (BUT), Cardi M, Zaffagnini M, De Lillo A, Castiglia D, Chibani K, Gualberto JM, Rouhier N, Jacquot JP, Esposito S, Cardi, Manuela, Zaffagnini, Mirko, DE LILLO, Alessia, Castiglia, Daniela, Chibani, Kamel, Gualberto, José Manuel, Rouhier, Nicola, Jacquot, Jean Pierre, and Esposito, Sergio
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0106 biological sciences ,0301 basic medicine ,disulfure ,STRESS ,[SDV]Life Sciences [q-bio] ,Amino Acid Motifs ,Dehydrogenase ,nadph ,Plant Science ,01 natural sciences ,Pentose Phosphate Pathway ,Serine ,Thioredoxins ,NADPH, poplar, G6PDH, cysteine, redox regulation ,déshydrogénase ,Glutamate synthase ,Plastids ,MOLECULAR CHARACTERIZATION ,Cloning, Molecular ,PENTOSE-PHOSPHATE PATHWAY ,ComputingMilieux_MISCELLANEOUS ,Plant Proteins ,biology ,food and beverages ,General Medicine ,ARABIDOPSIS ,Recombinant Proteins ,Populus ,Biochemistry ,glucose 6 phosphate déshydrogénase ,Oxidation-Reduction ,régulation redox ,BARLEY ROOTS ,HUMAN GLUCOSE-6-PHOSPHATE-DEHYDROGENASE ,ISOFORMS ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,Glucosephosphate Dehydrogenase ,Pentose phosphate pathway ,plante supérieure ,Oxidative pentose phosphate pathway ,CHLAMYDOMONAS-REINHARDTII ,thioredoxine ,03 medical and health sciences ,Genetic ,Complementary DNA ,cystéine ,Genetics ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,PLANTS ,Amino Acid Sequence ,Cysteine ,Binding site ,Thioredoxin ,Populu ,Binding Sites ,Active site ,[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,mécanisme de régulation ,030104 developmental biology ,GLUTAMATE SYNTHASE ,Mutagenesis, Site-Directed ,biology.protein ,Sequence Alignment ,Agronomy and Crop Science ,NADP ,010606 plant biology & botany - Abstract
A cDNA coding for a plastidic P2-type G6PDH isoform from A cDNA coding for a plastidic P2-type G6PDH isoform from poplar (Populus tremula x tremuloides) has been used to express and purify to homogeneity the mature recombinant protein with a N-terminus His-tag. The study of the kinetic properties of the recombinant enzyme showed an in vitro redox sensing modulation exerted by reduced DTT. The interaction with thioredoxins (TRXs) was then investigated. Five cysteine to serine variants (C145S - C175S - C183S - C195S - C242S) and a variant with a double substitution for Cys175 and Cys183 (C175S/C183S) have been generated, purified and biochemically characterized in order to investigate the specific role(s) of cysteines in terms of redox regulation and NADPH-dependent inhibition. Three cysteine residues (C145, C194, C242) are suggested to have a role in controlling the NADP+ access to the active site, and in stabilizing the NADPH regulatory binding site. Our results also indicate that the regulatory disulfide involves residues Cys175 and Cys183 in a position similar to those of chloroplastic P1-G6PDHs, but the modulation is exerted primarily by TRX m-type, in contrast to P1-G6PDH, which is regulated by TRX f. This unexpected specificity indicates differences in the mechanism of regulation, and redox sensing of plastidic P2-G6PDH compared to chloroplastic P1-G6PDH in higher plants. (Populus tremula x tremuloides) has been used to express and purify to homogeneity the mature recombinant protein with a N-terminus His-tag. The study of the kinetic properties of the recombinant enzyme showed an in vitro redox sensing modulation exerted by reduced DTT. The interaction with thioredoxins (TRXs) was then investigated. Five cysteine to serine variants (C145S - C175S - C183S - C195S - C242S) and a variant with a double substitution for Cys175 and Cys183 (C175S/C183S) have been generated, purified and biochemically characterized in order to investigate the specific role(s) of cysteines in terms of redox regulation and NADPH-dependent inhibition. Three cysteine residues (C145, C194, C242) are suggested to have a role in controlling the NADP+ access to the active site, and in stabilizing the NADPH regulatory binding site. Our results also indicate that the regulatory disulfide involves residues Cys175 and Cys183 in a position similar to those of chloroplastic P1-G6PDHs, but the modulation is exerted primarily by TRX m-type, in contrast to P1-G6PDH, which is regulated by TRX f. This unexpected specificity indicates differences in the mechanism of regulation, and redox sensing of plastidic P2-G6PDH compared to chloroplastic P1-G6PDH in higher plants.
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- 2016
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19. In vivo Assessment of Rotatory Knee Laxity after ACL Reconstruction with Inertial Sensors
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G. M. Marcheggiani Muccioli, G. Huri, A. Grassi, M. Rotini, M. Doral, S. Zaffagnini, M. Marcacci., and G.M. Marcheggiani Muccioli, G. Huri, A. Grassi, M. Rotini, M. Doral, S. Zaffagnini, M. Marcacci.
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In vivo Assessment of Rotatory Knee Laxity after ACL Reconstruction with Inertial Sensors - Published
- 2015
20. Insight into Protein S-nitrosylation in Chlamydomonas reinhardtii
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Christophe H. Marchand, Xing-Huang Gao, Samuel Morisse, Stéphane D. Lemaire, Mirko Zaffagnini, Morisse S, 32., Zaffagnini, M, Gao, Xh, Lemaire, Sd, and Marchand, Ch
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medicine.diagnostic_test ,Protein nitrosylation ,Physiology ,Clinical Biochemistry ,Nitrosylation ,Mutagenesis ,Chlamydomonas reinhardtii ,cysteine, nitric oxide, nitrosylation, proteomics, chlamydomonas reinhardtii ,Translation (biology) ,Cell Biology ,Biology ,biology.organism_classification ,Biochemistry ,Western blot ,medicine ,General Earth and Planetary Sciences ,Protein folding ,Molecular Biology ,Protein Processing, Post-Translational ,Original Research Communication ,General Environmental Science ,Cysteine ,Plant Proteins - Abstract
Aims: Protein S-nitrosylation, a post-translational modification (PTM) consisting of the covalent binding of nitric oxide (NO) to a cysteine thiol moiety, plays a major role in cell signaling and is recognized to be involved in numerous physiological processes and diseases in mammals. The importance of nitrosylation in photosynthetic eukaryotes has been less studied. The aim of this study was to expand our knowledge on protein nitrosylation by performing a large-scale proteomic analysis of proteins undergoing nitrosylation in vivo in Chlamydomonas reinhardtii cells under nitrosative stress. Results: Using two complementary proteomic approaches, 492 nitrosylated proteins were identified. They participate in a wide range of biological processes and pathways, including photosynthesis, carbohydrate metabolism, amino acid metabolism, translation, protein folding or degradation, cell motility, and stress. Several proteins were confirmed in vitro by western blot, site-directed mutagenesis and activity measurements. Moreover, 392 sites of nitrosylation were also identified. These results strongly suggest that S-nitrosylation could constitute a major mechanism of regulation in C. reinhardtii under nitrosative stress conditions. Innovation: This study constitutes the largest proteomic analysis of protein nitrosylation reported to date. Conclusion: The identification of 381 previously unrecognized targets of nitrosylation further extends our knowledge on the importance of this PTM in photosynthetic eukaryotes. The data have been deposited to the ProteomeXchange repository with identifier PXD000569. Antioxid. Redox Signal. 21, 1271–1284.
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- 2014
21. Glutathionylation in the photosynthetic model organism Chlamydomonas reinhardtii: a proteomic survey
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Mariette Bedhomme, Stéphane D. Lemaire, Mirko Zaffagnini, Hayam Groni, Christophe H. Marchand, Carine Puppo, Brigitte Gontero, Paulette Decottignies, Corinne Cassier-Chauvat, Biologie moléculaire et cellulaire des eucaryotes, Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Institut de biochimie et biophysique moléculaire et cellulaire (IBBMC), Université Paris-Sud - Paris 11 (UP11)-Centre National de la Recherche Scientifique (CNRS), Bioénergétique et Ingénierie des Protéines (BIP ), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Biologie et Biotechnologie des Cyanobactéries (B2CYA), Département Microbiologie (Dpt Microbio), Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Université Pierre et Marie Curie - Paris 6 ( UPMC ) -Centre National de la Recherche Scientifique ( CNRS ), Institut de biochimie et biophysique moléculaire et cellulaire ( IBBMC ), Université Paris-Sud - Paris 11 ( UP11 ) -Centre National de la Recherche Scientifique ( CNRS ), Bioénergétique et Ingénierie des Protéines ( BIP ), Aix Marseille Université ( AMU ) -Centre National de la Recherche Scientifique ( CNRS ), Biologie et Biotechnologie des Cyanobactéries ( B2CYA ), Département Microbiologie ( Dpt Microbio ), Institut de Biologie Intégrative de la Cellule ( I2BC ), Université Paris-Sud - Paris 11 ( UP11 ) -Commissariat à l'énergie atomique et aux énergies alternatives ( CEA ) -Université Paris-Saclay-Centre National de la Recherche Scientifique ( CNRS ) -Université Paris-Sud - Paris 11 ( UP11 ) -Commissariat à l'énergie atomique et aux énergies alternatives ( CEA ) -Université Paris-Saclay-Centre National de la Recherche Scientifique ( CNRS ) -Institut de Biologie Intégrative de la Cellule ( I2BC ), Université Paris-Sud - Paris 11 ( UP11 ) -Commissariat à l'énergie atomique et aux énergies alternatives ( CEA ) -Université Paris-Saclay-Centre National de la Recherche Scientifique ( CNRS ) -Université Paris-Sud - Paris 11 ( UP11 ) -Commissariat à l'énergie atomique et aux énergies alternatives ( CEA ) -Université Paris-Saclay-Centre National de la Recherche Scientifique ( CNRS ), Zaffagnini M, Bedhomme M, Groni H, Marchand CH, Puppo C, Gontero B, Cassier-Chauvat C, Decottignies P, and Lemaire SD.
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Proteomics ,0106 biological sciences ,[SDV]Life Sciences [q-bio] ,Blotting, Western ,Chlamydomonas reinhardtii ,Protein glutathionylation ,01 natural sciences ,Biochemistry ,Chromatography, Affinity ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Tandem Mass Spectrometry ,Photosynthesis ,Molecular Biology ,Aldose-Ketose Isomerases ,Cells, Cultured ,Glyceraldehyde 3-phosphate dehydrogenase ,Plant Proteins ,030304 developmental biology ,0303 health sciences ,Phosphoglycerate kinase ,Phosphoribulokinase ,biology ,[ SDV ] Life Sciences [q-bio] ,Research ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Glutathione ,biology.organism_classification ,Oxidative Stress ,Phosphoglycerate Kinase ,Phosphotransferases (Alcohol Group Acceptor) ,chemistry ,Biotinylation ,biology.protein ,REDOX PROTEOMICS ,Oxidation-Reduction ,Protein Processing, Post-Translational ,GLUTATHIONYLATION ,Chromatography, Liquid ,Plasmids ,010606 plant biology & botany - Abstract
International audience; Protein glutathionylation is a redox post-translational modification occurring under oxidative stress conditions and playing a major role in cell regulation and signaling. This modification has been mainly studied in nonphotosynthetic organisms, whereas much less is known in photosynthetic organisms despite their important exposure to oxidative stress caused by changes in environmental conditions. We report a large scale proteomic analysis using biotinylated glutathione and streptavidin affinity chromatography that allowed identification of 225 glutathionylated proteins in the eukaryotic unicellular green alga Chlamydomonas reinhardtii. Moreover, 56 sites of glutathionylation were also identified after peptide affinity purification and tandem mass spectrometry. The targets identified belong to a wide range of biological processes and pathways, among which the Calvin-Benson cycle appears to be a major target. The glutathionylation of four enzymes of this cycle, phosphoribulokinase, glyceraldehyde-3-phosphate dehydrogenase, ribose-5-phosphate isomerase, and phosphoglycerate kinase was confirmed by Western blot and activity measurements. The results suggest that glutathionylation could constitute a major mechanism of regulation of the Calvin-Benson cycle under oxidative stress conditions.
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- 2012
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22. The emerging roles of protein glutathionylation in chloroplasts
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Mariette Bedhomme, Stéphane D. Lemaire, Paolo Trost, Mirko Zaffagnini, Zaffagnini M., Bedhomme M., Lemaire S.D., and Trost P.
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Chloroplasts ,Plant Science ,Biology ,GLUTAREDOXIN ,Protein glutathionylation ,Chloroplast Thioredoxins ,chemistry.chemical_compound ,Glutaredoxin ,Genetics ,GLUTATHIONE ,Sulfhydryl Compounds ,DISULFIDE BONDS ,HYDROGEN PEROXIDE ,Glutaredoxins ,Plant Proteins ,POPULUS ,food and beverages ,ARABIDOPSIS THALIANA ,Free Radical Scavengers ,General Medicine ,Glutathione ,Plants ,Cell biology ,Crosstalk (biology) ,Biochemistry ,chemistry ,CHLAMYDOMONAS REINHARDTII ,THIOREDOXIN ,CYSTEINE ,NITROSOGLUTATHIONE ,Signal transduction ,Thioredoxin ,Reactive Oxygen Species ,Oxidation-Reduction ,Protein Processing, Post-Translational ,Agronomy and Crop Science ,Signal Transduction ,Cysteine - Abstract
Reactive oxygen species play important roles in redox signaling mainly through a set of reversible post-translational modifications of cysteine thiol residues in proteins, including glutathionylation and dithiol/disulfide exchange. Protein glutathionylation has been extensively studied in mammals but emerging evidence suggests that it can play important roles in plants and in chloroplast in particular. This redox modification involves protein thiols and glutathione and is mainly controlled by glutaredoxins, oxidoreductases belonging to the thioredoxin superfamily. In this review, we first present the possible mechanisms of protein glutathionylation and then introduce the chloroplast systems of glutaredoxins and thioredoxins, in order to pinpoint the biochemical properties that make some glutaredoxin isoforms the master enzymes in deglutathionylation. Finally, we discuss the possible roles of glutathionylation in thiol protection, protein regulation, reactive oxygen species scavenging and redox signaling in chloroplasts, with emphasis on the crosstalk between thioredoxin- and glutaredoxin-mediated signaling pathways.
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- 2012
23. Glutathionylation of cytosolic glyceraldehyde-3-phosphate dehydrogenase from the model plant Arabidopsis thaliana is reversed by both glutaredoxins and thioredoxins in vitro
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Stéphane D. Lemaire, Jérémy Couturier, Mariette Bedhomme, Christophe H. Marchand, Nicolas Rouhier, Paolo Trost, Mirko Zaffagnini, Mattia Adamo, Dept Expt Evolutionary Biol, Lab Mol Plant Physiol, Alma Mater Studiorum University of Bologna (UNIBO), Biologie moléculaire et cellulaire des eucaryotes, Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Interactions Arbres-Microorganismes (IAM), Université de Lorraine (UL)-Institut National de la Recherche Agronomique (INRA), Ministero dell'Istruzione, dell'Universita e della Ricerca [PRIN2008XB774B-005], ANR (Agence Nationale de la Recherche) [08-BLAN-0153 GLUTAPHOTO, ANR-07-JCJC-0121], PHC (Partenariats Hubert Curien) Galilee Project, Ville de Paris by 'Research in Paris' fellowship, Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Bedhomme M., Adamo M., Marchand Ch., Couturier J., Rouhier N., Lemaire S.D., Zaffagnini M., and Trost P.
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Models, Molecular ,0106 biological sciences ,REDOX REGULATION ,Thioredoxin reductase ,[SDV]Life Sciences [q-bio] ,Arabidopsis ,Reductase ,YEAST SACCHAROMYCES-CEREVISIAE ,BIOTIN-CONJUGATED GLUTATHIONE ,01 natural sciences ,Biochemistry ,REDUCTASE ,chemistry.chemical_compound ,Cytosol ,Thioredoxins ,Glutaredoxin ,HYDROGEN PEROXIDE ,OXIDATIVE STRESS ,Glyceraldehyde 3-phosphate dehydrogenase ,chemistry.chemical_classification ,0303 health sciences ,REDOX ,biology ,Glyceraldehyde-3-Phosphate Dehydrogenases ,glycolysis ,Glutathione ,Recombinant Proteins ,Amino acid ,Isoenzymes ,PHOTOSYNTHETIC ORGANISMS ,Oxidation-Reduction ,EXPRESSION ,Thioredoxin-Disulfide Reductase ,DNA, Plant ,Molecular Sequence Data ,PROTEIN S-GLUTATHIONYLATION ,Models, Biological ,CHLAMYDOMONAS-REINHARDTII ,UNIQUE PROPERTIES ,03 medical and health sciences ,Amino Acid Sequence ,Cysteine ,Molecular Biology ,Glutaredoxins ,030304 developmental biology ,Base Sequence ,Sequence Homology, Amino Acid ,Arabidopsis Proteins ,redox signalling ,deglutathionylation ,Cell Biology ,THIOLATION ,Enzyme ,chemistry ,Mutagenesis, Site-Directed ,biology.protein ,Arabidopsis thaliana cytosolic isoform I glyceraldehyde-3-phosphate dehydrogenase (AtGapC1) ,glutathionylation ,010606 plant biology & botany - Abstract
Plants contain both cytosolic and chloroplastic GAPDHs (glyceraldehyde-3-phosphate dehydrogenases). In Arabidopsis thaliana, cytosolic GAPDH is involved in the glycolytic pathway and is represented by two differentially expressed isoforms (GapC1 and GapC2) that are 98% identical in amino acid sequence. In the present study we show that GapC1 is a phosphorylating NAD-specific GAPDH with enzymatic activity strictly dependent on Cys(149). Catalytic Cys(149) is the only solvent-exposed cysteine of the protein and its thiol is relatively acidic (pK(a)=5.7). This property makes GapC1 sensitive to oxidation by H(2)O(2), which appears to inhibit enzyme activity by converting the thiolate of Cys(149) (-S-) into irreversible oxidized forms (-SO(2)(-) and -SO(3)(-)) via a labile sulfenate intermediate (-SO(-)). GSH (reduced glutathione) prevents this irreversible process by reacting with Cys(149) sulfenates to give rise to a mixed disulfide (Cys(149)-SSG), as demonstrated by both MS and biotinylated GSH. Glutathionylated GapC1 can be fully reactivated either by cytosolic glutaredoxin, via a GSH-dependent monothiol mechanism, or, less efficiently, by cytosolic thioredoxins physiologically reduced by NADPH:thioredoxin reductase. The potential relevance of these findings is discussed in the light of the multiple functions of GAPDH in eukaryotic cells (e.g. glycolysis, control of gene expression and apoptosis) that appear to be influenced by the redox state of the catalytic Cys(149).
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- 2012
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24. Plant thioredoxin CDSP32 regenerates 1-cys methionine sulfoxide reductase B activity through the direct reduction of sulfenic acid
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Stéphane D. Lemaire, Pascal Rey, Edith Laugier, Pierre Le Maréchal, Mirko Zaffagnini, Lionel Tarrago, Christophe H. Marchand, Biologie cellulaire et moléculaire des plantes et des bactéries (BCMPB), Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de la Méditerranée - Aix-Marseille 2, Institut de biochimie et biophysique moléculaire et cellulaire (IBBMC), Université Paris-Sud - Paris 11 (UP11)-Centre National de la Recherche Scientifique (CNRS), Biologie moléculaire et cellulaire des eucaryotes, Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC), Université de la Méditerranée - Aix-Marseille 2-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Tarrago L, Laugier E, Zaffagnini M, Marchand CH, Le Maréchal P, Lemaire SD, Rey P., Biodiversité et Biotechnologie Fongiques (BBF), Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-École Centrale de Marseille (ECM), Commissariat à l'énergie atomique et aux énergies alternatives (CEA), University of Bologna, Laboratoire de génie électrique de Paris (LGEP), Université Paris-Sud - Paris 11 (UP11)-Université Pierre et Marie Curie - Paris 6 (UPMC)-SUPELEC-Centre National de la Recherche Scientifique (CNRS), Institut des Neurosciences de Paris-Saclay (Neuro-PSI), Dassault Aviation, Aménagement, Développement, Environnement, Santé et Sociétés (ADES), and Centre National de la Recherche Scientifique (CNRS)-Université Bordeaux Segalen - Bordeaux 2-Université Bordeaux Montaigne
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0106 biological sciences ,MESH: Oxidation-Reduction ,[SDV]Life Sciences [q-bio] ,Arabidopsis ,Reductase ,01 natural sciences ,Biochemistry ,Catalysis ,Sulfenic Acids ,03 medical and health sciences ,chemistry.chemical_compound ,Thioredoxins ,MESH: Thioredoxins ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,MESH: Arabidopsis ,Molecular Biology ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Methionine ,biology ,Chemistry ,Methionine sulfoxide ,Active site ,Cell Biology ,MESH: Catalysis ,SULFENIC ACID ,MESH: Mutagenesis, Site-Directed ,MESH: Sulfenic Acids ,MESH: Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Mutagenesis, Site-Directed ,Enzymology ,Thiol ,biology.protein ,Methionine sulfoxide reductase ,Electrophoresis, Polyacrylamide Gel ,Sulfenic acid ,Thioredoxin ,Oxidation-Reduction ,010606 plant biology & botany ,MESH: Electrophoresis, Polyacrylamide Gel - Abstract
International audience; Thioredoxins (Trxs) are ubiquitous enzymes catalyzing the reduction of disulfide bonds, thanks to a CXXC active site. Among their substrates, 2-Cys methionine sulfoxide reductases B (2-Cys MSRBs) reduce the R diastereoisomer of methionine sulfoxide (MetSO) and possess two redox-active Cys as follows: a catalytic Cys reducing MetSO and a resolving one, involved in disulfide bridge formation. The other MSRB type, 1-Cys MSRBs, possesses only the catalytic Cys, and their regeneration mechanisms by Trxs remain unclear. The plant plastidial Trx CDSP32 is able to provide 1-Cys MSRB with electrons. CDSP32 includes two Trx modules with one potential active site (219)CGPC(222) and three extra Cys. Here, we investigated the redox properties of recombinant Arabidopsis CDSP32 and delineated the biochemical mechanisms of MSRB regeneration by CDSP32. Free thiol titration and 4-acetamido-4'-maleimidyldistilbene-2,2'-disulfonic acid alkylation assays indicated that the Trx possesses only two redox-active Cys, very likely the Cys(219) and Cys(222). Protein electrophoresis analyses coupled to mass spectrometry revealed that CDSP32 forms a heterodimeric complex with MSRB1 via reduction of the sulfenic acid formed on MSRB1 catalytic Cys after MetSO reduction. MSR activity assays using variable CDSP32 amounts revealed that MSRB1 reduction proceeds with a 1:1 stoichiometry, and redox titrations indicated that CDSP32 and MSRB1 possess midpoints potentials of -337 and -328 mV at pH 7.9, respectively, indicating that regeneration of MSRB1 activity by the Trx through sulfenic acid reduction is thermodynamically feasible in physiological conditions.
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- 2010
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25. Glutathionylation in photosynthetic organisms
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Gao XG, Bedhomme M, Michelet L, Lemaire S.D., ZAFFAGNINI, MIRKO, Gao XG, Bedhomme M, Michelet L, Zaffagnini M, and Lemaire SD.
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GLUTATHIONYLATION - Abstract
Protein glutathionylation is a reversible posttranslational modification promoted by oxidative and nitrosative stresses and consisting of the formation of a mixed disulfide between glutathione and a protein cysteine residue. This modification can protect specific cysteines from irreversible oxidation but can also modulate protein activities, either positively or negatively, and thereby play a role in many cellular processes including signaling. While the mechanism of glutathionylation prevailing in vivo remains unclear, the reverse reaction, called deglutathionylation, is mainly catalyzed by small disulfide oxidoreductases of the thioredoxin family named glutaredoxins (GRXs). This chapter will provide an overview of our current knowledge of the underlying molecular mechanisms, and especially the functions of GRXs, but will also review the targets and the possible physiological functions of protein glutathionylation.
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- 2009
26. Thioredoxins and Related Proteins
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Michelet L, Lemaire SD, ZAFFAGNINI, MIRKO, Michelet L, Zaffagnini M, and Lemaire SD
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THIOREDOXIN - Abstract
no abstract
- Published
- 2009
27. Redox regulation of chloroplastic glucose-6-phosphate dehydrogenase: a new role for f-type thioredoxin
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Paolo Trost, Guillaume Née, Emmanuelle Issakidis-Bourguet, Mirko Zaffagnini, NEE G., ZAFFAGNINI M., TROST P., and ISSAKIDIS-BOURGUET E.
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Models, Molecular ,animal structures ,Chloroplasts ,Light ,Biophysics ,Arabidopsis ,Dehydrogenase ,Oxidative phosphorylation ,Pentose phosphate pathway ,Biology ,Glucosephosphate Dehydrogenase ,Oxidative pentose phosphate pathway ,Biochemistry ,chemistry.chemical_compound ,Chloroplast Thioredoxins ,Structural Biology ,Genetics ,Glucose-6-phosphate dehydrogenase ,Cysteine ,Molecular Biology ,Ferredoxin ,chemistry.chemical_classification ,Arabidopsis Proteins ,Plastidial thioredoxin ,Cell Biology ,Darkness ,biology.organism_classification ,Recombinant Proteins ,Cell biology ,Protein Structure, Tertiary ,Isoenzymes ,Enzyme ,chemistry ,Redox regulation ,Ferredoxins ,Thioredoxin ,Oxidation-Reduction - Abstract
Glucose-6-phosphate dehydrogenase (G6PDH) is the key enzyme of the oxidative pentose phosphate pathway supplying reducing power (as NADPH) in non-photosynthesizing cells. We have examined in detail the redox regulation of the plastidial isoform predominantly present in Arabidopsis green tissues (AtG6PDH1) and found that its oxidative activation is strictly dependent on plastidial thioredoxins (Trxs) that show differential efficiencies. Light/dark modulation of AtG6PDH1 was reproduced in vitro in a reconstituted ferredoxin/Trx system using f-type Trx allowing to propose a new function for this Trx isoform co-ordinating both reductive (Calvin cycle) and oxidative pentose phosphate pathways.
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- 2009
28. Regeneration mechanisms of arabidopsis thaliana methionine sulfoxide reductases B by glutaredoxins and thioredoxins
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Stéphane D. Lemaire, Mirko Zaffagnini, Lionel Tarrago, Nicolas Rouhier, Pascal Rey, Pierre Le Maréchal, Edith Laugier, Christophe H. Marchand, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Centre National de la Recherche Scientifique (CNRS), Université Paris-Sud - Paris 11 (UP11), Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Agence Nationale de la Recherche, Tarrago L, Laugier E, Zaffagnini M, Marchand C, Le Maréchal P, Rouhier N, Lemaire SD, and Rey P.
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BIOCHEMICAL-CHARACTERIZATION ,REDOX REGULATION ,PROTEIN ,PEROXIREDOXIN ,Biochemistry ,chemistry.chemical_compound ,Thioredoxins ,Arabidopsis ,Glutaredoxin ,CATALYTIC MECHANISM ,Arabidopsis thaliana ,bactérie ,0303 health sciences ,arbre ,biology ,Enzyme Catalysis and Regulation ,ACTIVE-SITE ,030302 biochemistry & molecular biology ,POPLAR ,Glutathione ,ARABIDOPSIS THALIANA ,METHIONINE ,REGENERATION ,ESCHERICHIA-COLI ,S-GLUTATHIONYLATION ,REDUCING AGENT ,PEUPLIER ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM] ,protéine ,Methionine sulfoxide reductase ,escherichia coli ,Oxidoreductases ,populus ,Models, Biological ,Catalysis ,methionine sulfoxide ,03 medical and health sciences ,Cysteine ,Sulfhydryl Compounds ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] ,Molecular Biology ,Glutaredoxins ,Plant Physiological Phenomena ,030304 developmental biology ,Methionine ,Methionine sulfoxide ,Cell Biology ,biology.organism_classification ,Protein Structure, Tertiary ,Kinetics ,arabidopsis ,chemistry ,Methionine Sulfoxide Reductases ,Mutation ,Mutagenesis, Site-Directed ,Sulfenic acid - Abstract
International audience; Methionine oxidation leads to the formation of S- and R-diastereomers of methionine sulfoxide (MetSO), which are reduced back to methionine by methionine sulfoxide reductases (MSRs) A and B, respectively.MSRBs are classified in two groups depending on the conservation of one or two redox-active Cys: 2-Cys MSRBs possess a catalytic Cys reducing MetSO and a resolving Cys allowing regeneration by thioredoxins (Trxs). The second type, 1-Cys MSRBs, possess only the catalytic Cys. The biochemical mechanisms involved in activity regeneration of 1-Cys MSRBs remain largely elusive. In the present work, we used recombinant plastidial Arabidopsis thaliana MSRB1 and MSRB2, as models for 1-Cys and 2-Cys MSRBs, respectively, to delineate the Trx- and glutaredoxindependent reduction mechanisms. Activity assays carried out using a series of cysteinic mutants, combined to measurement of free thiols under distinct oxidation states and to mass spectrometry experiments, show that the 2-Cys MSRB2 is reduced by Trx through a dithiol-disulfide exchange involving both redox-active Cys of the two partners. Regarding 1-Cys MSRB1, oxidation of the enzyme after substrate reduction leads to the formation of a stable sulfenic acid on the catalytic Cys, which is subsequently glutathionylated. The deglutathionylation of MSRB1 is achieved by both mono- and dithiol glutaredoxins (Grxs) and involves only their N-terminal conserved catalytic Cys. This study proposes a detailed mechanism of the regeneration of 1-Cys MSRB activity by Grxs, which likely constitute physiological reductants for this type of MSR.
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- 2009
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29. The thioredoxin independent isoform of photosynthetic glyceraldehyde-3-phosphate dehydrogenase is selectively regulated by glutathionylation
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ZAFFAGNINI, MIRKO, SPARLA, FRANCESCA, TROST, PAOLO BERNARDO, MICHELET L., MARCHAND C., DECOTTIGNIES P., LE MARÉCHAL P., MIGINIAC MASLOW M., NOCTOR G., LEMAIRE S. D., ZAFFAGNINI M., MICHELET L., MARCHAND C., SPARLA F., DECOTTIGNIES P., LE MARÉCHAL P., MIGINIAC-MASLOW M., NOCTOR G., TROST P., and LEMAIRE S.D.
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- 2007
30. Thioredoxin-dependent regulation of photosynthetic glyceraldehyde-3-phosphate dehydrogenase: autonomous vs. CP12-dependent mechanisms
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Francesca Sparla, Sandra Scagliarini, Giuseppe Falini, Lucia Marri, Simona Fermani, Paolo Trost, Paolo Pupillo, Mirko Zaffagnini, TROST P., FERMANI S., MARRI L., ZAFFAGNINI M., FALINI G., SCAGLIARINI S., PUPILLO P., and SPARLA F.
- Subjects
biology ,Phosphoribulokinase ,Dehydrogenase ,Cell Biology ,Plant Science ,General Medicine ,Biochemistry ,Chloroplast ,Thioredoxins ,Glyceraldehyde-3-Phosphate Dehydrogenase (NADP+)(Phosphorylating) ,stomatognathic system ,biology.protein ,Light-independent reactions ,NAD+ kinase ,Photosynthesis ,Thioredoxin ,Glyceraldehyde 3-phosphate dehydrogenase ,Plant Proteins ,Homotetramer - Abstract
Regulation of the Calvin-Benson cycle under varying light/dark conditions is a common property of oxygenic photosynthetic organisms and photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is one of the targets of this complex regulatory system. In cyanobacteria and most algae, photosynthetic GAPDH is a homotetramer of GapA subunits which do not contain regulatory domains. In these organisms, dark-inhibition of the Calvin-Benson cycle involves the formation of a kinetically inhibited supramolecular complex between GAPDH, the regulatory peptide CP12 and phosphoribulokinase. Conditions prevailing in the dark, i.e. oxidation of thioredoxins and low NADP(H)/NAD(H) ratio promote aggregation. Although this regulatory system has been inherited in higher plants, these phototrophs contain in addition a second type of GAPDH subunits (GapB) resulting from the fusion of GapA with the C-terminal half of CP12. Heterotetrameric A(2)B(2)-GAPDH constitutes the major photosynthetic GAPDH isoform of higher plants chloroplasts and coexists with CP12 and A(4)-GAPDH. GapB subunits of A(2)B(2)-GAPDH have inherited from CP12 a regulatory domain (CTE for C-terminal extension) which makes the enzyme sensitive to thioredoxins and pyridine nucleotides, resembling the GAPDH/CP12/PRK system. The two systems are similar in other respects: oxidizing conditions and low NADP(H)/NAD(H) ratios promote aggregation of A(2)B(2)-GAPDH into strongly inactivated A(8)B(8)-GAPDH hexadecamers, and both CP12 and CTE specifically affect the NADPH-dependent activity of GAPDH. The alternative, lower activity with NADH is always unaffected. Based on the crystal structure of spinach A(4)-GAPDH and the analysis of site-specific mutants, a model of the autonomous (CP12-independent) regulatory mechanism of A(2)B(2)-GAPDH is proposed. Both CP12 and CTE seem to regulate different photosynthetic GAPDH isoforms according to a common and ancient molecular mechanism.
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- 2006
31. Thioredoxins, glutaredoxins, and glutathionylation: new crosstalks to explore
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Emmanuelle Issakidis-Bourguet, Hélène Vanacker, Laure Michelet, Myroslawa Miginiac-Maslow, Mirko Zaffagnini, Vincent Massot, Stéphane D. Lemaire, Eliane Keryer, Michelet L, Zaffagnini M, Massot V, Keryer E, Vanacker H, Miginiac-Maslow M, Issakidis-Bourguet E, and Lemaire SD.
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chemistry.chemical_classification ,Reactive oxygen species ,biology ,Disulfide bond ,Cell Biology ,Plant Science ,General Medicine ,Glutathione ,GLUTAREDOXIN ,biology.organism_classification ,Protein glutathionylation ,Biochemistry ,Redox ,Cell biology ,chemistry.chemical_compound ,Thioredoxins ,chemistry ,Arabidopsis ,Glutaredoxin ,Thioredoxin ,Oxidoreductases ,Oxidation-Reduction ,Glutaredoxins ,Signal Transduction - Abstract
Oxidants are widely considered as toxic molecules that cells have to scavenge and detoxify efficiently and continuously. However, emerging evidence suggests that these oxidants can play an important role in redox signaling, mainly through a set of reversible post-translational modifications of thiol residues on proteins. The most studied redox system in photosynthetic organisms is the thioredoxin (TRX) system, involved in the regulation of a growing number of target proteins via thiol/disulfide exchanges. In addition, recent studies suggest that glutaredoxins (GRX) could also play an important role in redox signaling especially by regulating protein glutathionylation, a post-translational modification whose importance begins to be recognized in mammals while much less is known in photosynthetic organisms. This review focuses on oxidants and redox signaling with particular emphasis on recent developments in the study of functions, regulation mechanisms and targets of TRX, GRX and glutathionylation. This review will also present the complex emerging interplay between these three components of redox-signaling networks.
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- 2006
32. Ancient supramolecular complexes and new autonomous regulation of photosynthetic GAPDH. A paradigm for fine metabolic tuning in higher plants
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TROST, PAOLO BERNARDO, SPARLA, FRANCESCA, MARRI, LUCIA, ZAFFAGNINI, MIRKO, FERMANI, SIMONA, FALINI, GIUSEPPE, PUPILLO, PAOLO, Ripamonti A., Trost P., Sparla F., Marri L., Zaffagnini M., Fermani S., Falini G., Ripamonti A., and Pupillo P.
- Published
- 2005
33. Glutathionylation of chloroplast thioredoxin f: a new redox signaling mechanism in plants
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MICHELET L., MARCHAND C.H., COLLIN V., DECOTTIGNIES P., TSAN P. LANCELIN J. M., MIGINIAC MASLOW M., NOCTOR G., LEMAIRE S. D., ZAFFAGNINI, MIRKO, TROST, PAOLO BERNARDO, MICHELET L., ZAFFAGNINI M., MARCHAND CH., COLLIN V., DECOTTIGNIES P., TSAN P. LANCELIN J.-M., TROST P., MIGINIAC-MASLOW M., NOCTOR G., and LEMAIRE S.D.
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- 2005
34. Orthobiologic therapies delay the need for hip arthroplasty in patients with avascular necrosis of the femoral head: A systematic review and survival analysis.
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Zaffagnini M, Boffa A, Andriolo L, Raggi F, Zaffagnini S, and Filardo G
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- Humans, Platelet-Rich Plasma, Biological Therapy methods, Survival Analysis, Femur Head Necrosis surgery, Femur Head Necrosis therapy, Arthroplasty, Replacement, Hip
- Abstract
Purpose: The aim of this systematic review and survival analysis was to quantify the benefits of orthobiologic augmentation therapies for the treatment of avascular necrosis (AVN) of the femoral head and identify the most effective approach to delay the need for total hip arthroplasty (THA)., Methods: A systematic review of the literature was performed on PubMed, Scopus, and Cochrane on clinical studies on orthobiologic therapies used alone or as an augmentation to core decompression or other procedures to address hip AVN. A qualitative analysis of the different biological therapies applied was performed. Afterward, the results of these procedures were quantitatively analysed to document their survivorship from THA compared to treatment groups without orthobiologics. Kaplan-Meier analysis was performed for all studies and then by categorising orthobiologics into treatment subgroups., Results: A total of 106 studies were included (4505 patients). Different orthobiologic approaches have been evaluated: cell-based therapies including bone marrow aspirate concentrate (BMAC) and bone marrow mesenchymal stromal cells (BM-MSCs), platelet-rich plasma (PRP), or other bioactive molecules applied in the osteonecrotic area or as intra-arterial injections. The survival analysis at 120 months documented a higher (p < 0.0005) cumulative survivorship with orthobiologics (69.4%) compared to controls (48.5%). The superiority was shown specifically for BMAC (p < 0.0005), BM-MSCs (p < 0.0005), intra-arterial (p < 0.0005) and PRP (p = 0.011) approaches, but the direct comparison of these approaches with their controls confirmed benefits only for BMAC (p < 0.0005)., Conclusion: This systematic review and survival analysis demonstrated that orthobiologics have the potential to improve survivorship in patients affected by hip AVN. In particular, the specific analysis of different orthobiologic products supported relevant benefits for BMAC augmentation in terms of survival from the need for THA, while no clear benefits were confirmed for other orthobiologics., Level of Evidence: Level III., (© 2024 The Author(s). Knee Surgery, Sports Traumatology, Arthroscopy published by John Wiley & Sons Ltd on behalf of European Society of Sports Traumatology, Knee Surgery and Arthroscopy.)
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- 2025
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35. Structural and biochemical characterization of Arabidopsis alcohol dehydrogenases reveals distinct functional properties but similar redox sensitivity.
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Meloni M, Rossi J, Fanti S, Carloni G, Tedesco D, Treffon P, Piccinini L, Falini G, Trost P, Vierling E, Licausi F, Giuntoli B, Musiani F, Fermani S, and Zaffagnini M
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- Substrate Specificity, S-Nitrosoglutathione metabolism, Amino Acid Sequence, Ethanol metabolism, Arabidopsis enzymology, Arabidopsis genetics, Oxidation-Reduction, Alcohol Dehydrogenase metabolism, Alcohol Dehydrogenase genetics, Alcohol Dehydrogenase chemistry, Arabidopsis Proteins metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins chemistry
- Abstract
Alcohol dehydrogenases (ADHs) are a group of zinc-binding enzymes belonging to the medium-length dehydrogenase/reductase (MDR) protein superfamily. In plants, these enzymes fulfill important functions involving the reduction of toxic aldehydes to the corresponding alcohols (as well as catalyzing the reverse reaction, i.e., alcohol oxidation; ADH1) and the reduction of nitrosoglutathione (GSNO; ADH2/GSNOR). We investigated and compared the structural and biochemical properties of ADH1 and GSNOR from Arabidopsis thaliana. We expressed and purified ADH1 and GSNOR and determined two new structures, NADH-ADH1 and apo-GSNOR, thus completing the structural landscape of Arabidopsis ADHs in both apo- and holo-forms. A structural comparison of these Arabidopsis ADHs revealed a high sequence conservation (59% identity) and a similar fold. In contrast, a striking dissimilarity was observed in the catalytic cavity supporting substrate specificity and accommodation. Consistently, ADH1 and GSNOR showed strict specificity for their substrates (ethanol and GSNO, respectively), although both enzymes had the ability to oxidize long-chain alcohols, with ADH1 performing better than GSNOR. Both enzymes contain a high number of cysteines (12 and 15 out of 379 residues for ADH1 and GSNOR, respectively) and showed a significant and similar responsivity to thiol-oxidizing agents, indicating that redox modifications may constitute a mechanism for controlling enzyme activity under both optimal growth and stress conditions., (© 2024 Society for Experimental Biology and John Wiley & Sons Ltd.)
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- 2024
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36. Characterization of chloroplast ribulose-5-phosphate-3-epimerase from the microalga Chlamydomonas reinhardtii.
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Meloni M, Fanti S, Tedesco D, Gurrieri L, Trost P, Fermani S, Lemaire SD, Zaffagnini M, and Henri J
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- Ribulose-Bisphosphate Carboxylase metabolism, Models, Molecular, Chloroplasts metabolism, Racemases and Epimerases, Phosphates, Chlamydomonas reinhardtii metabolism, Microalgae metabolism, Pentoses
- Abstract
Carbon fixation relies on Rubisco and 10 additional enzymes in the Calvin-Benson-Bassham cycle. Epimerization of xylulose-5-phosphate (Xu5P) into ribulose-5-phosphate (Ru5P) contributes to the regeneration of ribulose-1,5-bisphosphate, the substrate of Rubisco. Ribulose-5-phosphate-3-epimerase (RPE, EC 5.1.3.1) catalyzes the formation of Ru5P, but it can also operate in the pentose-phosphate pathway by catalyzing the reverse reaction. Here, we describe the structural and biochemical properties of the recombinant RPE isoform 1 from Chlamydomonas (Chlamydomonas reinhardtii) (CrRPE1). The enzyme is a homo-hexamer that contains a zinc ion in the active site and exposes a catalytic pocket on the top of an α8β8 triose isomerase-type barrel as observed in structurally solved RPE isoforms from both plant and non-plant sources. By optimizing and developing enzyme assays to monitor the reversible epimerization of Ru5P to Xu5P and vice versa, we determined the catalytic parameters that differ from those of other plant paralogs. Despite being identified as a putative target of multiple thiol-based redox modifications, CrRPE1 activity is not affected by both reductive and oxidative treatments, indicating that enzyme catalysis is insensitive to possible redox alterations of cysteine residues. We mapped phosphorylation sites on the crystal structure, and the specific location at the entrance of the catalytic cleft supports a phosphorylation-based regulatory mechanism. This work provides an accurate description of the structural features of CrRPE1 and an in-depth examination of its catalytic and regulatory properties highlighting the physiological relevance of this enzyme in the context of photosynthetic carbon fixation., Competing Interests: Conflict of interest statement. None declared., (© The Author(s) 2023. Published by Oxford University Press on behalf of American Society of Plant Biologists. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2024
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37. Dark complexes of the Calvin-Benson cycle in a physiological perspective.
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Gurrieri L, Sparla F, Zaffagnini M, and Trost P
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- Glyceraldehyde-3-Phosphate Dehydrogenases chemistry, Photosynthesis physiology, Arabidopsis metabolism, Arabidopsis Proteins metabolism
- Abstract
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) are two enzymes of the Calvin Benson cycle that stand out for some peculiar properties they have in common: (i) they both use the products of light reactions for catalysis (NADPH for GAPDH, ATP for PRK), (ii) they are both light-regulated through thioredoxins and (iii) they are both involved in the formation of regulatory supramolecular complexes in the dark or low photosynthetic conditions, with or without the regulatory protein CP12. In the complexes, enzymes are transiently inactivated but ready to recover full activity after complex dissociation. Fully active GAPDH and PRK are in large excess for the functioning of the Calvin-Benson cycle, but they can limit the cycle upon complex formation. Complex dissociation contributes to photosynthetic induction. CP12 also controls PRK concentration in model photosynthetic organisms like Arabidopsis thaliana and Chlamydomonas reinhardtii. The review combines in vivo and in vitro data into an integrated physiological view of the role of GAPDH and PRK dark complexes in the regulation of photosynthesis., Competing Interests: Conflict of interest All authors have declared no conflicts of interest., (Copyright © 2023. Published by Elsevier Ltd.)
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- 2024
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38. Chloroplasts lacking class I glutaredoxins are functional but show a delayed recovery of protein cysteinyl redox state after oxidative challenge.
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Bohle F, Rossi J, Tamanna SS, Jansohn H, Schlosser M, Reinhardt F, Brox A, Bethmann S, Kopriva S, Trentmann O, Jahns P, Deponte M, Schwarzländer M, Trost P, Zaffagnini M, Meyer AJ, and Müller-Schüssele SJ
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- Oxidation-Reduction, Glutathione metabolism, Oxidative Stress, Chloroplasts metabolism, Disulfides chemistry, Hydrogen Peroxide metabolism, Glutaredoxins genetics, Glutaredoxins metabolism
- Abstract
Redox status of protein cysteinyl residues is mediated via glutathione (GSH)/glutaredoxin (GRX) and thioredoxin (TRX)-dependent redox cascades. An oxidative challenge can induce post-translational protein modifications on thiols, such as protein S-glutathionylation. Class I GRX are small thiol-disulfide oxidoreductases that reversibly catalyse S-glutathionylation and protein disulfide formation. TRX and GSH/GRX redox systems can provide partial backup for each other in several subcellular compartments, but not in the plastid stroma where TRX/light-dependent redox regulation of primary metabolism takes place. While the stromal TRX system has been studied at detail, the role of class I GRX on plastid redox processes is still unknown. We generate knockout lines of GRXC5 as the only chloroplast class I GRX of the moss Physcomitrium patens. While we find that PpGRXC5 has high activities in GSH-dependent oxidoreductase assays using hydroxyethyl disulfide or redox-sensitive GFP2 as substrates in vitro, Δgrxc5 plants show no detectable growth defect or stress sensitivity, in contrast to mutants with a less negative stromal E
GSH (Δgr1). Using stroma-targeted roGFP2, we show increased protein Cys steady state oxidation and decreased reduction rates after oxidative challenge in Δgrxc5 plants in vivo, indicating kinetic uncoupling of the protein Cys redox state from EGSH . Compared to wildtype, protein Cys disulfide formation rates and S-glutathionylation levels after H2 O2 treatment remained unchanged. Lack of class I GRX function in the stroma did not result in impaired carbon fixation. Our observations suggest specific roles for GRXC5 in the efficient transfer of electrons from GSH to target protein Cys as well as negligible cross-talk with metabolic regulation via the TRX system. We propose a model for stromal class I GRX function in efficient catalysis of protein dithiol/disulfide equilibria upon redox steady state alterations affecting stromal EGSH and highlight the importance of identifying in vivo target proteins of GRXC5., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2024
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39. Fluorogenic Hyaluronan Nanogels Track Individual Early Protein Aggregates Originated under Oxidative Stress.
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Cingolani M, Lugli F, Zaffagnini M, and Genovese D
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- Protein Aggregates, Nanogels, Proteins metabolism, Glyceraldehyde-3-Phosphate Dehydrogenases, Oxidative Stress, Protein Folding, Hyaluronic Acid metabolism, Arabidopsis metabolism
- Abstract
Proteins are broadly versatile biochemical materials, whose functionality is tightly related to their folding state. Native folding can be lost to yield misfolded conformations, often leading to formation of protein oligomers, aggregates, and biomolecular phase condensates. The fluorogenic hyaluronan HA-RB, a nonsulfonated glycosaminoglycan with a combination of polyanionic character and of hydrophobic spots due to rhodamine B dyes, binds to early aggregates of the model protein cytoplasmic glyceraldehyde-3-phosphate dehydrogenase 1 from Arabidopsis thaliana (AtGAPC1) since the very onset of the oligomeric phase, making them brightly fluorescent. This initial step of aggregation has, until now, remained elusive with other fluorescence- or scattering-based techniques. The information gathered from nanotracking (via light-sheet fluorescence microscopy) and from FCS in a confocal microscope converges to highlight the ability of HA-RB to bind protein aggregates from the very early steps of aggregation and with high affinity. Altogether, this fluorescence-based approach allows one to monitor and track individual early AtGAPC1 aggregates in the size range from 10 to 100 nm with high time (∼10-2 s) and space (∼250 nm) resolution.
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- 2024
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40. Custom-made implants for massive acetabular bone loss: accuracy with CT assessment.
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Romagnoli M, Zaffagnini M, Carillo E, Raggi F, Casali M, Leardini A, Marcheggiani Muccioli GM, Grassi A, and Zaffagnini S
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- Humans, Retrospective Studies, Reoperation, Acetabulum diagnostic imaging, Acetabulum surgery, Tomography, X-Ray Computed, Arthroplasty, Replacement, Hip methods, Hip Prosthesis
- Abstract
Background: Custom-made implants are a valid option in revision total hip arthroplasty to address massive acetabular bone loss. The aim of this study was to assess the accuracy of custom-made acetabular implants between preoperative planning and postoperative positioning using CT scans., Methods: In a retrospective analysis, three patients who underwent an acetabular custom-made prosthesis were identified. The custom-made designs were planned through 3D CT analysis considering surgical points of attention. The accuracy of intended implants positioning was assessed by comparing pre- and postoperative CT analyzing the center of rotation (CoR), anteversion, inclination, screws, and implant surface in contact with the bone., Results: The three cases presented satisfactory accuracy in positioning. A malpositioning in the third case was observed due to the posterization of the CoR of the implant of more than 10 mm. The other CoR vectors considered in the third patient and all vectors in the other two cases fall within 10 mm. All the cases were positioned with a difference of less than 10° of anteversion and inclination with respect to the planning., Conclusions: The current case series revealed promising accuracy in the positioning of custom-made acetabular prosthesis comparing the planned implant in preoperative CT with postoperative CT., (© 2023. BioMed Central Ltd., part of Springer Nature.)
- Published
- 2023
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41. Phosphoribulokinase abundance is not limiting the Calvin-Benson-Bassham cycle in Chlamydomonas reinhardtii .
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Boisset ND, Favoino G, Meloni M, Jomat L, Cassier-Chauvat C, Zaffagnini M, Lemaire SD, and Crozet P
- Abstract
Improving photosynthetic efficiency in plants and microalgae is of utmost importance to support the growing world population and to enable the bioproduction of energy and chemicals. Limitations in photosynthetic light conversion efficiency can be directly attributed to kinetic bottlenecks within the Calvin-Benson-Bassham cycle (CBBC) responsible for carbon fixation. A better understanding of these bottlenecks in vivo is crucial to overcome these limiting factors through bio-engineering. The present study is focused on the analysis of phosphoribulokinase (PRK) in the unicellular green alga Chlamydomonas reinhardtii . We have characterized a PRK knock-out mutant strain and showed that in the absence of PRK, Chlamydomonas cannot grow photoautotrophically while functional complementation with a synthetic construct allowed restoration of photoautotrophy. Nevertheless, using standard genetic elements, the expression of PRK was limited to 40% of the reference level in complemented strains and could not restore normal growth in photoautotrophic conditions suggesting that the CBBC is limited. We were subsequently able to overcome this initial limitation by improving the design of the transcriptional unit expressing PRK using diverse combinations of DNA parts including PRK endogenous promoter and introns. This enabled us to obtain strains with PRK levels comparable to the reference strain and even overexpressing strains. A collection of strains with PRK levels between 16% and 250% of WT PRK levels was generated and characterized. Immunoblot and growth assays revealed that a PRK content of ≈86% is sufficient to fully restore photoautotrophic growth. This result suggests that PRK is present in moderate excess in Chlamydomonas. Consistently, the overexpression of PRK did not increase photosynthetic growth indicating that that the endogenous level of PRK in Chlamydomonas is not limiting the Calvin-Benson-Bassham cycle under optimal conditions., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Boisset, Favoino, Meloni, Jomat, Cassier-Chauvat, Zaffagnini, Lemaire and Crozet.)
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- 2023
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42. Editorial: Chloroplast redox state: new insights into stress responses and acclimation.
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Zaffagnini M, Pilarska M, and Niewiadomska E
- Abstract
Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
- Published
- 2023
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43. Tricalcium Phosphate as a Bone Substitute to Treat Massive Acetabular Bone Defects in Hip Revision Surgery: A Systematic Review and Initial Clinical Experience with 11 Cases.
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Romagnoli M, Casali M, Zaffagnini M, Cucurnia I, Raggi F, Reale D, Grassi A, and Zaffagnini S
- Abstract
The use of tricalcium phosphate (TCP) as a bone substitute is gaining increasing interest to treat severe acetabular bone defects in revision total hip arthroplasty (rTHA). The aim of this study was to investigate the evidence regarding the efficacy of this material. A systematic review of the literature was performed according to the PRISMA and Cochrane guidelines. The study quality was assessed using the modified Coleman Methodology Score (mCMS) for all studies. A total of eight clinical studies (230 patients) were identified: six on TCP used as biphasic ceramics composed of TCP and hydroxyapatite (HA), and two as pure-phase ceramics consisting of TCP. The literature analysis showed eight retrospective case series, of which only two were comparative studies. The mCMS showed an overall poor methodology (mean score 39.5). While the number of studies and their methodology are still limited, the available evidence suggests safety and overall promising results. A total of 11 cases that underwent rTHA with a pure-phase ceramic presented satisfactory clinical and radiological outcomes at initial short-term follow-up. Further studies at long-term follow-up, involving a larger number of patients, are needed before drawing more definitive conclusions on the potential of TCP for the treatment of patients who undergo rTHA.
- Published
- 2023
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44. Ribulose-1,5-bisphosphate regeneration in the Calvin-Benson-Bassham cycle: Focus on the last three enzymatic steps that allow the formation of Rubisco substrate.
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Meloni M, Gurrieri L, Fermani S, Velie L, Sparla F, Crozet P, Henri J, and Zaffagnini M
- Abstract
The Calvin-Benson-Bassham (CBB) cycle comprises the metabolic phase of photosynthesis and is responsible for carbon fixation and the production of sugar phosphates. The first step of the cycle involves the enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) which catalyzes the incorporation of inorganic carbon into 3-phosphoglyceric acid (3PGA). The following steps include ten enzymes that catalyze the regeneration of ribulose-1,5-bisphosphate (RuBP), the substrate of Rubisco. While it is well established that Rubisco activity acts as a limiting step of the cycle, recent modeling studies and experimental evidence have shown that the efficiency of the pathway is also impacted by the regeneration of the Rubisco substrate itself. In this work, we review the current understanding of the structural and catalytic features of the photosynthetic enzymes that catalyze the last three steps of the regeneration phase, namely ribose-5-phosphate isomerase (RPI), ribulose-5-phosphate epimerase (RPE), and phosphoribulokinase (PRK). In addition, the redox- and metabolic-based regulatory mechanisms targeting the three enzymes are also discussed. Overall, this review highlights the importance of understudied steps in the CBB cycle and provides direction for future research aimed at improving plant productivity., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Meloni, Gurrieri, Fermani, Velie, Sparla, Crozet, Henri and Zaffagnini.)
- Published
- 2023
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45. Orthobiologic Injections for the Treatment of Hip Osteoarthritis: A Systematic Review.
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Zaffagnini M, Boffa A, Andriolo L, Raggi F, Zaffagnini S, and Filardo G
- Abstract
The use of orthobiologics is gaining increasing interest as a minimally invasive treatment for hip osteoarthritis (OA). The aim of this study was to investigate the evidence about the safety and efficacy of these products. A systematic review of the literature was performed according to the PRISMA and Cochrane guidelines. The study quality was assessed using the RoB 2.0 for randomized controlled trials (RCTs) and the modified Coleman Methodology Score (mCMS) for all studies. A total of 20 clinical studies (735 patients) was identified, 12 on PRP injections and eight on cell-based therapies (five from bone marrow, two from adipose tissue, and one from amniotic fluid). The publication trend increased over time, with over 50% of articles published from 2019. The literature analysis showed only six RCTs, all on PRP injections. The mCMS showed an overall fair methodology (mean score 59.4). While the number of studies and their methodology are still limited, the available evidence suggests safety and overall promising results, with the treatment success being inversely proportional to the severity of OA. Further high-level controlled trials are needed before drawing more definitive conclusions on the real potential of orthobiologics for the injective treatment of patients affected by hip OA.
- Published
- 2022
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46. Crystal structure of chloroplast fructose-1,6-bisphosphate aldolase from the green alga Chlamydomonas reinhardtii.
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Le Moigne T, Sarti E, Nourisson A, Zaffagnini M, Carbone A, Lemaire SD, and Henri J
- Subjects
- Carbon Dioxide, Chloroplasts, Fructose, Fructose-Bisphosphate Aldolase, Photosynthesis, Ribulose-Bisphosphate Carboxylase chemistry, Ribulose-Bisphosphate Carboxylase metabolism, Chlamydomonas reinhardtii metabolism
- Abstract
The Calvin-Benson cycle fixes carbon dioxide into organic triosephosphates through the collective action of eleven conserved enzymes. Regeneration of ribulose-1,5-bisphosphate, the substrate of Rubisco-mediated carboxylation, requires two lyase reactions catalyzed by fructose-1,6-bisphosphate aldolase (FBA). While cytoplasmic FBA has been extensively studied in non-photosynthetic organisms, functional and structural details are limited for chloroplast FBA encoded by oxygenic phototrophs. Here we determined the crystal structure of plastidial FBA from the unicellular green alga Chlamydomonas reinhardtii (Cr). We confirm that CrFBA folds as a TIM barrel, describe its catalytic pocket and homo-tetrameric state. Multiple sequence profiling classified the photosynthetic paralogs of FBA in a distinct group from non-photosynthetic paralogs. We mapped the sites of thiol- and phospho-based post-translational modifications known from photosynthetic organisms and predict their effects on enzyme catalysis., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022. Published by Elsevier Inc.)
- Published
- 2022
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47. Structural snapshots of nitrosoglutathione binding and reactivity underlying S-nitrosylation of photosynthetic GAPDH.
- Author
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Mattioli EJ, Rossi J, Meloni M, De Mia M, Marchand CH, Tagliani A, Fanti S, Falini G, Trost P, Lemaire SD, Fermani S, Calvaresi M, and Zaffagnini M
- Subjects
- NADP metabolism, Nitric Oxide metabolism, Oxidation-Reduction, Photosynthesis, Sulfhydryl Compounds metabolism, Glyceraldehyde-3-Phosphate Dehydrogenases metabolism, S-Nitrosoglutathione metabolism
- Abstract
S-nitrosylation is a redox post-translational modification widely recognized to play an important role in cellular signaling as it can modulate protein function and conformation. At the physiological level, nitrosoglutathione (GSNO) is considered the major physiological NO-releasing compound due to its ability to transfer the NO moiety to protein thiols but the structural determinants regulating its redox specificity are not fully elucidated. In this study, we employed photosynthetic glyceraldehyde-3-phosphate dehydrogenase from Chlamydomonas reinhardtii (CrGAPA) to investigate the molecular mechanisms underlying GSNO-dependent thiol oxidation. We first observed that GSNO causes reversible enzyme inhibition by inducing S-nitrosylation. While the cofactor NADP
+ partially protects the enzyme from GSNO-mediated S-nitrosylation, protein inhibition is not observed in the presence of the substrate 1,3-bisphosphoglycerate, indicating that the S-nitrosylation of the catalytic Cys149 is responsible for CrGAPA inactivation. The crystal structures of CrGAPA in complex with NADP+ and NAD+ reveal a general structural similarity with other photosynthetic GAPDH. Starting from the 3D structure, we carried out molecular dynamics simulations to identify the protein residues involved in GSNO binding. The reaction mechanism of GSNO with CrGAPA Cys149 was investigated by quantum mechanical/molecular mechanical calculations, which permitted to disclose the relative contribution of protein residues in modulating the activation barrier of the trans-nitrosylation reaction. Based on our findings, we provide functional and structural insights into the response of CrGAPA to GSNO-dependent regulation, possibly expanding the mechanistic features to other protein cysteines susceptible to be oxidatively modified by GSNO., (Copyright © 2022 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2022
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48. Quantitative Proteome Profiling of a S -Nitrosoglutathione Reductase (GSNOR) Null Mutant Reveals a New Class of Enzymes Involved in Nitric Oxide Homeostasis in Plants.
- Author
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Treffon P, Rossi J, Gabellini G, Trost P, Zaffagnini M, and Vierling E
- Abstract
Nitric oxide (NO) is a short-lived radical gas that acts as a signaling molecule in all higher organisms, and that is involved in multiple plant processes, including germination, root growth, and fertility. Regulation of NO-levels is predominantly achieved by reaction of oxidation products of NO with glutathione to form S -nitrosoglutathione (GSNO), the principal bioactive form of NO. The enzyme S -nitrosoglutathione reductase (GSNOR) is a major route of NADH-dependent GSNO catabolism and is critical to NO homeostasis. Here, we performed a proteomic analysis examining changes in the total leaf proteome of an Arabidopsis thaliana GSNOR null mutant ( hot5-2/gsnor1-3 ). Significant increases or decreases in proteins associated with chlorophyll metabolism and with redox and stress metabolism provide insight into phenotypes observed in hot5-2/gsnor1-3 plants. Importantly, we identified a significant increase in proteins that belong to the aldo-keto reductase (AKR) protein superfamily, AKR4C8 and 9. Because specific AKRs have been linked to NO metabolism in mammals, we expressed and purified A. thaliana AKR4C8 and 9 and close homologs AKR4C10 and 11 and determined that they have NADPH-dependent activity in GSNO and S -nitroso-coenzyme A (SNO-CoA) reduction. Further, we found an increase of NADPH-dependent GSNO reduction activity in hot5-2/gsnor1-3 mutant plants. These data uncover a new, NADPH-dependent component of NO metabolism that may be integrated with NADH-dependent GSNOR activity to control NO homeostasis in plants., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Treffon, Rossi, Gabellini, Trost, Zaffagnini and Vierling.)
- Published
- 2021
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49. Calvin-Benson cycle regulation is getting complex.
- Author
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Gurrieri L, Fermani S, Zaffagnini M, Sparla F, and Trost P
- Subjects
- Glyceraldehyde-3-Phosphate Dehydrogenases metabolism, Thioredoxins metabolism, Cyanobacteria genetics, Cyanobacteria metabolism, Magnoliopsida genetics, Magnoliopsida metabolism, Photosynthesis
- Abstract
Oxygenic phototrophs use the Calvin-Benson cycle to fix CO
2 during photosynthesis. In the dark, glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK), two enzymes of the Calvin-Benson cycle, form an inactive complex with the regulatory protein CP12, mainly under the control of thioredoxins and pyridine nucleotides. In the light, complex dissociation allows GAPDH and PRK reactivation. The GAPDH/CP12/PRK complex is conserved from cyanobacteria to angiosperms and coexists in land plants with an autoassembling GAPDH that is analogously regulated. With the recently described 3D structures of PRK and GAPDH/CP12/PRK, the structural proteome of this ubiquitous regulatory system has been completed. This outcome opens a new avenue for understanding the regulatory potential of photosynthetic carbon fixation by laying the foundation for its knowledge-based manipulation., (Copyright © 2021 Elsevier Ltd. All rights reserved.)- Published
- 2021
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50. Plasticity in plastid redox networks: evolution of glutathione-dependent redox cascades and glutathionylation sites.
- Author
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Müller-Schüssele SJ, Bohle F, Rossi J, Trost P, Meyer AJ, and Zaffagnini M
- Subjects
- Embryophyta metabolism, Evolution, Molecular, Oxidation-Reduction, Phylogeny, Streptophyta metabolism, Glutathione metabolism, Plastids metabolism
- Abstract
Background: Flexibility of plant metabolism is supported by redox regulation of enzymes via posttranslational modification of cysteine residues, especially in plastids. Here, the redox states of cysteine residues are partly coupled to the thioredoxin system and partly to the glutathione pool for reduction. Moreover, several plastid enzymes involved in reactive oxygen species (ROS) scavenging and damage repair draw electrons from glutathione. In addition, cysteine residues can be post-translationally modified by forming a mixed disulfide with glutathione (S-glutathionylation), which protects thiol groups from further oxidation and can influence protein activity. However, the evolution of the plastid glutathione-dependent redox network in land plants and the conservation of cysteine residues undergoing S-glutathionylation is largely unclear., Results: We analysed the genomes of nine representative model species from streptophyte algae to angiosperms and found that the antioxidant enzymes and redox proteins belonging to the plastid glutathione-dependent redox network are largely conserved, except for lambda- and the closely related iota-glutathione S-transferases. Focussing on glutathione-dependent redox modifications, we screened the literature for target thiols of S-glutathionylation, and found that 151 plastid proteins have been identified as glutathionylation targets, while the exact cysteine residue is only known for 17% (26 proteins), with one or multiple sites per protein, resulting in 37 known S-glutathionylation sites for plastids. However, 38% (14) of the known sites were completely conserved in model species from green algae to flowering plants, with 22% (8) on non-catalytic cysteines. Variable conservation of the remaining sites indicates independent gains and losses of cysteines at the same position during land plant evolution., Conclusions: We conclude that the glutathione-dependent redox network in plastids is highly conserved in streptophytes with some variability in scavenging and damage repair enzymes. Our analysis of cysteine conservation suggests that S-glutathionylation in plastids plays an important and yet under-investigated role in redox regulation and stress response.
- Published
- 2021
- Full Text
- View/download PDF
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