36 results on '"de Oliveira, Edivaldo Herculano Corrêa"'
Search Results
2. Transcriptome analysis displays new molecular insights into the mechanisms of action of Mebendazole in gastric cancer cells
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da Silva, Emerson Lucena, Mesquita, Felipe Pantoja, Pinto, Laine Celestino, Gomes, Bruna Puty Silva, de Oliveira, Edivaldo Herculano Correa, Burbano, Rommel Mario Rodríguez, Moraes, Maria Elisabete Amaral de, de Souza, Pedro Filho Noronha, and Montenegro, Raquel Carvalho
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- 2025
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3. Astrocyte-Like Cells Transcriptome Changes After Exposure to a Low and Non-cytotoxic MeHg Concentration
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Puty, Bruna, Bittencourt, Leonardo Oliveira, Plaça, Jéssica Rodrigues, de Oliveira, Edivaldo Herculano Corrêa, and Lima, Rafael Rodrigues
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- 2023
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4. One binge-type cycle of alcohol plus ketamine exposure induces emotional-like disorders associated with oxidative damage in adolescent female rats
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da Silveira, Cinthia Cristina Menezes, Cartágenes, Sabrina de Carvalho, Kobayashi, Natália Harumi Corrêa, Farias, Sarah Viana, de Souza-Junior, Fábio José Coelho, Fernandes, Luanna Melo Pereira, do Prado, Alejandro Ferraz, Aragão, Walessa Alana Bragança, Lima, Rafael Rodrigues, Ferreira, Wallax Augusto Silva, de Oliveira, Edivaldo Herculano Correa, Mello Júnior, Fernando Augusto Rodrigues, Burbano, Rommel Mario Rodríguez, Fontes-Júnior, Enéas Andrade, and Maia, Cristiane do Socorro Ferraz
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- 2023
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5. DNA Damage and Proteomic Profile Changes in Rat Salivary Glands After Chronic Exposure to Inorganic Mercury
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Aragão, Walessa Alana Bragança, Bittencourt, Leonardo Oliveira, Lima, Leidiane Alencar de Oliveira, de Souza, Michel Platini Caldas, Nogueira, Lygia Sega, Dionizio, Aline, Buzalaf, Marília Afonso Rabelo, de Oliveira, Edivaldo Herculano Corrêa, Crespo-Lopez, Maria Elena, and Lima, Rafael Rodrigues
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- 2022
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6. Imaging Microstructural Damage and Alveolar Bone Loss in Rats Systemically Exposed to Methylmercury: First Experimental Evidence
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de Oliveira Lopes, Géssica, Aragão, Walessa Alana Bragança, Bittencourt, Leonardo Oliveira, Puty, Bruna, Lopes, Armando Pereira, dos Santos, Sávio Monteiro, Monteiro, Marta Chagas, de Oliveira, Edivaldo Herculano Corrêa, da Silva, Márcia Cristina Freitas, and Lima, Rafael Rodrigues
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- 2021
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7. The role of the chromosomal rearrangements in the evolution and speciation of Elopiformes fishes (Teleostei; Elopomorpha)
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de Sousa, Rodrigo Petry Corrêa, Silva-Oliveira, Gláucia Caroline, Furo, Ivanete Oliveira, de Oliveira-Filho, Aldemir Branco, de Brito, Carla Denise Bessa, Rabelo, Luan, Guimarães-Costa, Auryceia, de Oliveira, Edivaldo Herculano Corrêa, and Vallinoto, Marcelo
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- 2021
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8. Mebendazole induces apoptosis via C-MYC inactivation in malignant ascites cell line (AGP01)
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Pinto, Laine Celestino, Mesquita, Felipe Pantoja, Soares, Bruno Moreira, da Silva, Emerson Lucena, Puty, Bruna, de Oliveira, Edivaldo Herculano Corrêa, Burbano, Rommel Rodriguez, and Montenegro, Raquel Carvalho
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- 2019
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9. Identifying novel genetic alterations in pediatric acute lymphoblastic leukemia based on copy number analysis
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Batista-Gomes, Jéssica Almeida, Mello, Jr, Fernando Augusto Rodrigues, de Oliveira, Edivaldo Herculano Corrêa, de Souza, Michel Platini Caldas, Wanderley, Alayde Vieira, da Costa Pantoja, Laudreisa, dos Santos, Ney Pereira Carneiro, Khayat, Bruna Cláudia Meireles, and Khayat, André Salim
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- 2020
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10. Hybridization between subterranean tuco-tucos (Rodentia, Ctenomyidae) with contrasting phylogenetic positions
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Kubiak, Bruno Busnello, Kretschmer, Rafael, Leipnitz, Leonardo Trindade, Maestri, Renan, de Almeida, Thamara Santos, Borges, Leandro Rodrigues, Galiano, Daniel, Pereira, Jorge C., de Oliveira, Edivaldo Herculano Corrêa, Ferguson-Smith, Malcolm A., and de Freitas, Thales Renato Ochotorena
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- 2020
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11. Intrachromosomal rearrangements in two representatives of the genus Saltator (Thraupidae, Passeriformes) and the occurrence of heteromorphic Z chromosomes
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dos Santos, Michelly da Silva, Kretschmer, Rafael, Silva, Fabio Augusto Oliveira, Ledesma, Mario Angel, O’Brien, Patricia C. M., Ferguson-Smith, Malcolm A., Del Valle Garnero, Analía, de Oliveira, Edivaldo Herculano Corrêa, and Gunski, Ricardo José
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- 2015
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12. Cytotaxonomy and Molecular Analyses of Mycteria americana (Ciconiidae: Ciconiiformes): Insights on Stork Phylogeny.
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de Sousa, Rodrigo Petry Corrêa, Campos, Paula Sabrina Bronze, dos Santos, Michelly da Silva, O'Brien, Patricia Caroline, Ferguson-Smith, Malcolm Andrew, and de Oliveira, Edivaldo Herculano Corrêa
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STORKS ,CICONIIFORMES ,MOLECULAR phylogeny ,CYTOTAXONOMY ,HOMOLOGOUS chromosomes ,PHYLOGENY - Abstract
Although molecular information for the wood stork (Mycteria americana) has been well described, data concerning their karyotypical organization and phylogenetic relationships with other storks are still scarce. Thus, we aimed to analyze the chromosomal organization and diversification of M. americana, and provide evolutionary insights based on phylogenetic data of Ciconiidae. For this, we applied both classical and molecular cytogenetic techniques to define the pattern of distribution of heterochromatic blocks and their chromosomal homology with Gallus gallus (GGA). Maximum likelihood analyses and Bayesian inferences (680 bp COI and 1007 bp Cytb genes) were used to determine their phylogenetic relationship with other storks. The results confirmed 2n = 72, and the heterochromatin distribution pattern was restricted to centromeric regions of the chromosomes. FISH experiments identified fusion and fission events involving chromosomes homologous to GGA macrochromosome pairs, some of which were previously found in other species of Ciconiidae, possibly corresponding to synapomorphies for the group. Phylogenetic analyses resulted in a tree that recovered only Ciconinii as a monophyletic group, while Mycteriini and Leptoptlini tribes were configured as paraphyletic clades. In addition, the association between phylogenetic and cytogenetic data corroborates the hypothesis of a reduction in the diploid number throughout the evolution of Ciconiidae. [ABSTRACT FROM AUTHOR]
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- 2023
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13. Characterization of a new cytotype and ocurrence of a B microchromosome in two spot astyanax, Astyanax bimaculatus Linnaeus, 1758 (Characiformes: Characidae).
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Corrêa de Sousa, Rodrigo Petry, dos Santos, Jaymeson Lielson Anjos, Silva‐Oliveira, Gláucia Caroline, Furo, Ivanete de Oliveira, de Oliveira, Edivaldo Herculano Corrêa, and Vallinoto, Marcelo
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ASTYANAX ,CHARACIDAE ,CHARACIFORMES ,CHROMOSOMAL rearrangement ,CHROMOSOMES - Abstract
Although Astyanax bimaculatus is the most representative species of the genus in the Amazon region, there are no cytogenetic studies of A. bimaculatus species in Amazon region. Thus, we aimed to analyse the chromosome complements of specimens from this area using classic and molecular cytogenetic approaches. The results revealed the existence of a distinct cytotype and this is the first report of the occurrence of a B microchromosome in the species. Overall, these data indicate that the karyotypic evolution of this species is complex, involving the occurrence of chromosomal rearrangements. [ABSTRACT FROM AUTHOR]
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- 2023
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14. Microchromosome BAC-FISH Reveals Different Patterns of Genome Organization in Three Charadriiformes Species.
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de Souza, Marcelo Santos, Barcellos, Suziane Alves, dos Santos, Michelly da Silva, Gunski, Ricardo José, Garnero, Analía del Valle, de Oliveira, Edivaldo Herculano Corrêa, O'Connor, Rebecca E., Griffin, Darren K., and Kretschmer, Rafael
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KARYOTYPES ,CHARADRIIFORMES ,BACTERIAL artificial chromosomes ,FLUORESCENCE in situ hybridization ,CYTOGENETICS ,SPECIES ,GENOMES - Abstract
Simple Summary: Numerous tiny (micro)chromosomes are a characteristic feature associated with birds, being found in smaller numbers in other organisms and absent in many, such as mammals. Although microchromosomes constitute a large portion of the genome in birds, data on them pertaining to comparative studies between birds are still scarce. This is the case in shorebirds (Charadriiformes), a group with a great variety of species. The aim of this study was to provide insight regarding the evolution of the microchromosomes of three species of shorebirds—the red knot (Calidris canutus), the wattled jacana (Jacana jacana), and the southern lapwing (Vanellus chilensis). The experiments are referred to as cross-species fluorescence in situ hybridization (FISH) mapping using probes called bacterial artificial chromosomes (or BACs), two (one labelled in red and one labelled in green) for every microchromosome. The results thus appear as the microchrochromosome with one green and one red end, revealing different patterns of organization over evolutionary time. In the red knot, they fuse together, but in the southern lapwing, they hardly change. We also described a new chromosome number for the red knot (92 in total). In conclusion, this study contributed to the understanding of microchromosomes organization and evolution of three shorebird species. Microchromosomes, once considered unimportant elements of the genome, represent fundamental building blocks of bird karyotypes. Shorebirds (Charadriiformes) comprise a wide variety of approximately 390 species and are considered a valuable model group for biological studies. Despite this variety, cytogenetic analysis is still very scarce in this bird order. Thus, the aim of this study was to provide insight into the Charadriiformes karyotype, with emphasis on microchromosome evolution in three species of shorebirds—Calidris canutus, Jacana jacana, and Vanellus chilensis—combining classical and molecular approaches. Cross-species FISH mapping applied two BAC probes for each microchromosome, GGA10–28 (except GGA16). The experiments revealed different patterns of microchromosome organization in the species investigated. Hence, while in C. canutus, we found two microchromosomes involved in chromosome fusions, they were present as single pairs in V. chilensis. We also described a new chromosome number for C. canutus (2n = 92). Hence, this study contributed to the understanding of genome organization and evolution of three shorebird species. [ABSTRACT FROM AUTHOR]
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- 2022
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15. Evolutionary Dynamics of Two Classes of Repetitive DNA in the Genomes of Two Species of Elopiformes (Teleostei, Elopomorpha).
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de Sousa, Rodrigo Petry Corrêa, Vasconcelos, Carolina Pinheiro, Rosário, Nayara Furtado do, Oliveira-Filho, Aldemir Branco de, de Oliveira, Edivaldo Herculano Corrêa, de Bello Cioffi, Marcelo, Vallinoto, Marcelo, and Silva-Oliveira, Gláucia Caroline
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- 2022
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16. Effects of long-term fluoride exposure are associated with oxidative biochemistry impairment and global proteomic modulation, but not genotoxicity, in parotid glands of mice.
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Miranda, Giza Hellen Nonato, Alencar de Oliveira Lima, Leidiane, Bittencourt, Leonardo Oliveira, dos Santos, Sávio Monteiro, Platini Caldas de Souza, Michel, Nogueira, Lygia Sega, de Oliveira, Edivaldo Herculano Corrêa, Monteiro, Marta Chagas, Dionizio, Aline, Leite, Aline Lima, Pessan, Juliano Pelim, Buzalaf, Marília Afonso Rabelo, and Lima, Rafael Rodrigues
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PAROTID glands ,PROTEOMICS ,SALIVARY glands ,BIOCHEMISTRY ,GENETIC toxicology ,SODIUM fluoride - Abstract
Background: Fluoride has become widely used in dentistry because of its effectiveness in caries control. However, evidence indicates that excessive intake interferes with the metabolic processes of different tissues. Thus, this study aimed to investigate the effects of long-term exposure to F on the parotid salivary gland of mice, from the analysis of oxidative, proteomic and genotoxic parameters. Materials and methods: The animals received deionized water containing 0, 10 or 50 mg/L of F, as sodium fluoride, for 60 days. After, parotid glands were collected for analysis of oxidative biochemistry, global proteomic profile, genotoxicity assessment and histopathological analyses. Results: The results revealed that exposure to fluoride interfered in the biochemical homeostasis of the parotid gland, with increased levels of thiobarbituric acid reactive species and reduced glutathione in the exposed groups; as well as promoted alteration of the glandular proteomic profile in these groups, especially in structural proteins and proteins related to oxidative stress. However, genotoxic assessment demonstrated that exposure to fluoride did not interfere with DNA integrity in these concentrations and durations of exposure. Also, it was not observed histopathological alterations in parotid gland. Conclusions: Thus, our results suggest that long-term exposure to fluoride promoted modulation of the proteomic and biochemical profile in the parotid glands, without inducing damage to the genetic component. These findings reinforce the importance of rationalizing the use of fluorides to maximize their preventative effects while minimizing the environmental risks. [ABSTRACT FROM AUTHOR]
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- 2022
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17. Comparative chromosome painting in Spizaetus tyrannus and Gallus gallus with the use of macro- and microchromosome probes.
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Carvalho, Carlos A., Furo, Ivanete O., O'Brien, Patricia C. M., Pereira, Jorge, O'Connor, Rebeca E., Griffin, Darren, Ferguson-Smith, Malcolm, and de Oliveira, Edivaldo Herculano Corrêa
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CHICKENS ,CHROMOSOMES ,KARYOTYPES ,FALCONIFORMES ,GROUP process ,STYE - Abstract
Although most birds show karyotypes with diploid number (2n) around 80, with few macrochromosomes and many microchromosomes pairs, some groups, such as the Accipitriformes, are characterized by a large karyotypic reorganization, which resulted in complements with low diploid numbers, and a smaller number of microchromosomal pairs when compared to other birds. Among Accipitriformes, the Accipitridae family is the most diverse and includes, among other subfamilies, the subfamily Aquilinae, composed of medium to large sized species. The Black-Hawk-Eagle (Spizaetus tyrannus-STY), found in South America, is a member of this subfamily. Available chromosome data for this species includes only conventional staining. Hence, in order to provide additional information on karyotype evolution process within this group, we performed comparative chromosome painting between S. tyrannus and Gallus gallus (GGA). Our results revealed that at least 29 fission-fusion events occurred in the STY karyotype, based on homology with GGA. Fissions occurred mainly in syntenic groups homologous to GGA1-GGA5. On the other hand, the majority of the microchromosomes were found fused to other chromosomal elements in STY, indicating these rearrangements played an important role in the reduction of the 2n to 68. Comparison with hybridization pattern of the Japanese-Mountain-Eagle (Nisaetus nipalensis orientalis), the only Aquilinae analyzed by comparative chromosome painting previously, did not reveal any synapomorphy that could represent a chromosome signature to this subfamily. Therefore, conclusions about karyotype evolution in Aquilinae require additional painting studies. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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18. Effects of Fluoride on Submandibular Glands of Mice: Changes in Oxidative Biochemistry, Proteomic Profile, and Genotoxicity.
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Lima, Leidiane Alencar de Oliveira, Miranda, Giza Hellen Nonato, Aragão, Walessa Alana Bragança, Bittencourt, Leonardo Oliveira, dos Santos, Sávio Monteiro, de Souza, Michel Platini Caldas, Nogueira, Lygia S., de Oliveira, Edivaldo Herculano Corrêa, Monteiro, Marta Chagas, Dionizio, Aline, Leite, Aline Lima, Pessan, Juliano Pelim, Buzalaf, Marília Afonso Rabelo, and Lima, Rafael Rodrigues
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PROTEOMICS ,SUBMANDIBULAR gland ,DEIONIZATION of water ,PROTEIN expression ,DRINKING water ,GLUTATHIONE ,GENETIC toxicology - Abstract
Although fluoride (F) is well-known to prevent dental caries, changes in cell processes in different tissues have been associated with its excessive exposure. Thus, this study aimed to evaluate the effects of F exposure on biochemical, proteomic, and genotoxic parameters of submandibular glands. Twenty one old rats (n = 30) were allocated into three groups: 60 days administration of drinking water containing 10 mgF/L, 50 mgF/L, or only deionized water (control). The submandibular glands were collected for oxidative biochemistry, protein expression profile, and genotoxic potential analyses. The results showed that both F concentrations increased the levels of thiobarbituric acid–reactive substances (TBARS) and reduced glutathione (GSH) and changed the proteomic profile, mainly regarding the cytoskeleton and cellular activity. Only the exposure to 50 mgF/L induced significant changes in DNA integrity. These findings reinforce the importance of continuous monitoring of F concentration in drinking water and the need for strategies to minimize F intake from other sources to obtain maximum preventive/therapeutic effects and avoid potential adverse effects. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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19. Chromosomal evolution and phylogenetic considerations in cuckoos (Aves, Cuculiformes, Cuculidae).
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dos Santos, Michelly da Silva, Kretschmer, Rafael, Furo, Ivanete de Oliveira, Gunski, Ricardo José, del Valle Garnero, Analía, Valeri, Mirela Pelizaro, O'Brien, Patricia C. M., Ferguson-Smith, Malcolm A., and de Oliveira, Edivaldo Herculano Corrêa
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CUCKOOS ,KARYOTYPES ,GENE mapping ,CHROMOSOMAL rearrangement ,BIRDS ,BIOLOGICAL evolution - Abstract
The Cuckoos have a long history of difficult classification. The species of this order have been the subject of several studies based on osteology, behavior, ecology, morphology and molecular data. Despite this, the relationship between Cuculiformes and species of other orders remains controversial. In this work, two species of Cuculidae, Guira guira (Gmelin, 1788) and Piaya cayana (Linnaeus, 1766), were analyzed by means of comparative chromosome painting in order to study the chromosome evolution of this group and to undertake the first chromosome mapping of these species. Our results demonstrate high chromosomal diversity, with 2n = 76 in G. guira, with fission and fusion events involving ancestral syntenies, while P. cayana presented only fissions, which were responsible for the high diploid number of 2n = 90. Interestingly, there were no chromosomal rearrangements in common between these species. Our results, based on Giemsa staining, were compared with previous data for other cuckoos and also with taxa proposed as sister-groups of Cuculiformes (Otidiformes, Musophagiformes and Opisthocomiformes). Cytogenetic comparisons demonstrated that cuckoo species can be divided into at least three major groups. In addition, we found no evidence to place Cuculiformes close to the groups proposed previously as sister-groups. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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20. Comparative chromosome painting in Columbidae (Columbiformes) reinforces divergence in Passerea and Columbea.
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Kretschmer, Rafael, de Oliveira Furo, Ivanete, Gunski, Ricardo José, del Valle Garnero, Analía, Pereira, Jorge C., O’Brien, Patricia C. M., Ferguson-Smith, Malcolm A., de Oliveira, Edivaldo Herculano Corrêa, and de Freitas, Thales Renato Ochotorena
- Abstract
Pigeons and doves (Columbiformes) are one of the oldest and most diverse extant lineages of birds. However, the karyotype evolution within Columbiformes remains unclear. To delineate the synteny-conserved segments and karyotypic differences among four Columbidae species, we used chromosome painting from Gallus gallus (GGA, 2n = 78) and Leucopternis albicollis (LAL, 2n = 68). Besides that, a set of painting probes for the eared dove, Zenaida auriculata (ZAU, 2n = 76), was generated from flow-sorted chromosomes. Chromosome painting with GGA and ZAU probes showed conservation of the first ten ancestral pairs in Z. auriculata, Columba livia, and Columbina picui, while in Leptotila verreauxi, fusion of the ancestral chromosomes 6 and 7 was observed. However, LAL probes revealed a complex reorganization of ancestral chromosome 1, involving paracentric and pericentric inversions. Because of the presence of similar intrachromosomal rearrangements in the chromosomes corresponding to GGA1q in the Columbidae and Passeriformes species but without a common origin, these results are consistent with the recent proposal of divergence within Neoaves (Passerea and Columbea). In addition, inversions in chromosome 2 were identified in C. picui and L. verreauxi. Thus, in four species of distinct genera of the Columbidae family, unique chromosomal rearrangements have occurred during karyotype evolution, confirming that despite conservation of the ancestral syntenic groups, these chromosomes have been modified by the occurrence of intrachromosomal rearrangements. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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21. Multidirectional chromosome painting in Synallaxis frontalis (Passeriformes, Furnariidae) reveals high chromosomal reorganization, involving fissions and inversions.
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Kretschmer, Rafael, de Lima, Vanusa Lilian Camargo, de Souza, Marcelo Santos, Costa, Alice Lemos, O'Brien, Patricia C. M., Ferguson-Smith, Malcolm A., de Oliveira, Edivaldo Herculano Corrêa, Gunski, Ricardo José, and Del Valle Garnero, Analía
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PASSERIFORMES ,CHROMOSOMES ,FURNARIIDAE ,FISSION (Asexual reproduction) ,GENETIC polymorphisms - Abstract
In this work we performed comparative chromosome painting using probes from Gallus gallus (GGA) Linnaeus, 1758 and Leucopternis albicollis (LAL) Latham, 1790 in Synallaxis frontalis Pelzeln, 1859 (Passeriformes, Furnariidae), an exclusively Neotropical species, in order to analyze whether the complex pattern of intrachromosomal rearrangements (paracentric and pericentric inversions) proposed for Oscines and Suboscines is shared with more basal species. S. frontalis has 82 chromosomes, similar to most Avian species, with a large number of microchromosomes and a few pairs of macrochromosomes. We found polymorphisms in pairs 1 and 3, where homologues were submetacentric and acrocentric. Hybridization of GGA probes showed syntenies in the majority of ancestral macrochromosomes, except for GGA1 and GGA2, which hybridized to more than one pair of chromosomes each. LAL probes confirmed the occurrence of intrachromosomal rearrangements in the chromosomes corresponding to GGA1q, as previously proposed for species from the order Passeriformes. In addition, LAL probes suggest that pericentric inversions or centromere repositioning were responsible for variations in the morphology of the heteromorphic pairs 1 and 3. Altogether, the analysis of our data on chromosome painting and the data published in other Passeriformes highlights chromosomal changes that have occurred during the evolution of Passeriformes. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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22. Genomic Organization of Repetitive DNA in Woodpeckers (Aves, Piciformes): Implications for Karyotype and ZW Sex Chromosome Differentiation.
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de Oliveira, Thays Duarte, Kretschmer, Rafael, Bertocchi, Natasha Avila, Degrandi, Tiago Marafiga, de Oliveira, Edivaldo Herculano Corrêa, Cioffi, Marcelo de Bello, Garnero, Analía del Valle, and Gunski, Ricardo José
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WOODPECKERS ,DNA ,SEX chromosomes ,KARYOTYPES ,MICROSATELLITE repeats - Abstract
Birds are characterized by a low proportion of repetitive DNA in their genome when compared to other vertebrates. Among birds, species belonging to Piciformes order, such as woodpeckers, show a relatively higher amount of these sequences. The aim of this study was to analyze the distribution of different classes of repetitive DNA—including microsatellites, telomere sequences and 18S rDNA—in the karyotype of three Picidae species (Aves, Piciformes)—Colaptes melanochloros (2n = 84), Colaptes campestris (2n = 84) and Melanerpes candidus (2n = 64)–by means of fluorescence in situ hybridization. Clusters of 18S rDNA were found in one microchromosome pair in each of the three species, coinciding to a region of (CGG)
10 sequence accumulation. Interstitial telomeric sequences were found in some macrochromosomes pairs, indicating possible regions of fusions, which can be related to variation of diploid number in the family. Only one, from the 11 different microsatellite sequences used, did not produce any signals. Both species of genus Colaptes showed a similar distribution of microsatellite sequences, with some difference when compared to M. candidus. Microsatellites were found preferentially in the centromeric and telomeric regions of micro and macrochromosomes. However, some sequences produced patterns of interstitial bands in the Z chromosome, which corresponds to the largest element of the karyotype in all three species. This was not observed in the W chromosome of Colaptes melanochloros, which is heterochromatic in most of its length, but was not hybridized by any of the sequences used. These results highlight the importance of microsatellite sequences in differentiation of sex chromosomes, and the accumulation of these sequences is probably responsible for the enlargement of the Z chromosome. [ABSTRACT FROM AUTHOR]- Published
- 2017
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23. Chromosomal Diversity and Karyotype Evolution in South American Macaws (Psittaciformes, Psittacidae).
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de Oliveira Furo, Ivanete, Kretschmer, Rafael, O’Brien, Patrícia C., Ferguson-Smith, Malcolm A., and de Oliveira, Edivaldo Herculano Corrêa
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SOUTH Americans ,MACAWS ,PARROTS ,SPECIES distribution ,HABITAT destruction ,CYTOGENETICS - Abstract
Most species of macaws, which represent the largest species of Neotropical Psittacidae, characterized by their long tails and exuberant colours, are endangered, mainly because of hunting, illegal trade and habitat destruction. Long tailed species seem to represent a monophyletic group within Psittacidae, supported by cytogenetic data. Hence, these species show karyotypes with predominance of biarmed macrochromosomes, in contrast to short tailed species, with a predominance of acro/telocentric macrochromosomes. Because of their similar karyotypes, it has been proposed that inversions and translocations may be the main types of rearrangements occurring during the evolution of this group. However, only one species of macaw, Ara macao, that has had its genome sequenced was analyzed by means of molecular cytogenetics. Hence, in order to verify the rearrangements, we analyzed the karyotype of two species of macaws, Ara chloropterus and Anodorhynchus hyacinthinus, using cross-species chromosome painting with two different sets of probes from chicken and white hawk. Both intra- and interchromosomal rearrangements were observed. Chicken probes revealed the occurrence of fusions, fissions and inversions in both species, while the probes from white hawk determined the correct breakpoints or chromosome segments involved in the rearrangements. Some of these rearrangements were common for both species of macaws (fission of GGA1 and fusions of GGA1p/GGA4q, GGA6/GGA7 and GGA8/GGA9), while the fissions of GGA 2 and 4p were found only in A. chloropterus. These results confirm that despite apparent chromosomal similarity, macaws have very diverse karyotypes, which differ from each other not only by inversions and translocations as postulated before, but also by fissions and fusions. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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24. Molecular Cytogenetic Characterization of Multiple Intrachromosomal Rearrangements in Two Representatives of the Genus Turdus (Turdidae, Passeriformes).
- Author
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Kretschmer, Rafael, Gunski, Ricardo José, Garnero, Analía Del Valle, Furo, Ivanete de Oliveira, O'Brien, Patricia C. M., Ferguson-Smith, Malcolm A., and de Oliveira, Edivaldo Herculano Corrêa
- Subjects
CYTOGENETICS ,MOLECULAR biology ,PASSERIFORMES ,SONGBIRDS ,TURDIDAE ,RECOMBINANT DNA ,CHROMOSOMES ,CHICKENS - Abstract
Turdus rufiventris and Turdus albicollis, two songbirds belonging to the family Turdidae (Aves, Passeriformes) were studied by C-banding, 18S rDNA, as well as the use of whole chromosome probes derived from Gallus gallus (GGA) and Leucopternis albicollis (LAL). They showed very similar karyotypes, with 2n = 78 and the same pattern of distribution of heterochromatic blocks and hybridization patterns. However, the analysis of 18/28S rDNA has shown differences in the number of NOR-bearing chromosomes and ribosomal clusters. The hybridization pattern of GGA macrochromosomes was similar to the one found in songbirds studied by Fluorescent in situ hybridization, with fission of GGA 1 and GGA 4 chromosomes. In contrast, LAL chromosome paintings revealed a complex pattern of intrachromosomal rearrangements (paracentric and pericentric inversions) on chromosome 2, which corresponds to GGA1q. The first inversion changed the chromosomal morphology and the second and third inversions changed the order of chromosome segments. Karyotype analysis in Turdus revealed that this genus has derived characteristics in relation to the putative avian ancestral karyotype, highlighting the importance of using new tools for analysis of chromosomal evolution in birds, such as the probes derived from L. albicollis, which make it possible to identify intrachromosomal rearrangements not visible with the use of GGA chromosome painting solely. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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- View/download PDF
25. From Molecules to Behavior in Long-Term Inorganic Mercury Intoxication: Unraveling Proteomic Features in Cerebellar Neurodegeneration of Rats.
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Bittencourt, Leonardo Oliveira, Chemelo, Victória Santos, Aragão, Walessa Alana Bragança, Puty, Bruna, Dionizio, Aline, Teixeira, Francisco Bruno, Fernandes, Mileni Silva, Silva, Márcia Cristina Freitas, Fernandes, Luanna Melo Pereira, de Oliveira, Edivaldo Herculano Corrêa, Buzalaf, Marilia Afonso Rabelo, Crespo-Lopez, Maria Elena, Maia, Cristiane do Socorro Ferraz, and Lima, Rafael Rodrigues
- Subjects
MERCURY poisoning ,POLLUTANTS ,CELL death ,PROTEOMICS ,PURKINJE cells ,MERCURY ,INCLINED planes ,RATS - Abstract
Mercury is a severe environmental pollutant with neurotoxic effects, especially when exposed for long periods. Although there are several evidences regarding mercury toxicity, little is known about inorganic mercury (IHg) species and cerebellum, one of the main targets of mercury associated with the neurological symptomatology of mercurial poisoning. Besides that, the global proteomic profile assessment is a valuable tool to screen possible biomarkers and elucidate molecular targets of mercury neurotoxicity; however, the literature is still scarce. Thus, this study aimed to investigate the effects of long-term exposure to IHg in adult rats' cerebellum and explore the modulation of the cerebellar proteome associated with biochemical and functional outcomes, providing evidence, in a translational perspective, of new mercury toxicity targets and possible biomarkers. Fifty-four adult rats were exposed to 0.375 mg/kg of HgCl
2 or distilled water for 45 days using intragastric gavage. Then, the motor functions were evaluated by rotarod and inclined plane. The cerebellum was collected to quantify mercury levels, to assess the antioxidant activity against peroxyl radicals (ACAPs), the lipid peroxidation (LPO), the proteomic profile, the cell death nature by cytotoxicity and apoptosis, and the Purkinje cells density. The IHg exposure increased mercury levels in the cerebellum, reducing ACAP and increasing LPO. The proteomic approach revealed a total 419 proteins with different statuses of regulation, associated with different biological processes, such as synaptic signaling, energy metabolism and nervous system development, e.g., all these molecular changes are associated with increased cytotoxicity and apoptosis, with a neurodegenerative pattern on Purkinje cells layer and poor motor coordination and balance. In conclusion, all these findings feature a neurodegenerative process triggered by IHg in the cerebellum that culminated into motor functions deficits, which are associated with several molecular features and may be related to the clinical outcomes of people exposed to the toxicant. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
26. Cytogenetic Evidence Clarifies the Phylogeny of the Family Rhynchocyclidae (Aves: Passeriformes).
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Kretschmer, Rafael, Franz, Ismael, de Souza, Marcelo Santos, Garnero, Analía Del Valle, Gunski, Ricardo José, de Oliveira, Edivaldo Herculano Corrêa, O'Connor, Rebecca E., Griffin, Darren K., and de Freitas, Thales Renato Ochotorena
- Subjects
PASSERIFORMES ,BACTERIAL artificial chromosomes ,PHYLOGENY ,ZEBRA finch ,GENE mapping ,FLYCATCHERS ,PARSIMONIOUS models - Abstract
The phylogenetic position and taxonomic status of Rhynchocyclidae (Aves: Passeriformes) have been the subject of debate since their first description. In most models, Rhynchocyclidae represents a subfamily-level taxon placed within the Tyrant Flycatchers (Tyrannidae). Considering that this classification does not include cytotaxonomic characters, we tested the hypothesis that the chromosome organization of Rhynchocyclidae members differs from that of Tyrannidae. Hence, we selected two species, Tolmomyias sulphurescens, and Pitangus sulphuratus, representing Rhynchocyclidae and Tyrannidae, respectively. Results revealed a diploid number (2n) of 60 in T. sulphurescens and 2n = 80 in P. sulphuratus, indicating significant chromosomal differences. Chromosome mapping of Gallus gallus (GGA) and Taeniopygia guttata bacterial artificial chromosome (BAC) corresponding to chromosomes GGA1-28 (except 16) revealed that the genome evolution of T. sulphurescens involved extensive chromosome fusions of macrochromosomes and microchromosomes. On the other hand, P. sulphuratus retained the ancestral pattern of organization of macrochromosomes (except the centric fission involving GGA1) and microchromosomes. In conclusion, comparing our results with previous studies in Tyrant Flycatchers and allies indicates that P. sulphuratus has similar karyotypes to other Tyrannidae members. However, T. sulphurescens does not resemble the Tyrannidae family, reinforcing family status to the clade named Rhynchocyclidae. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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27. Karyotype Evolution and Genomic Organization of Repetitive DNAs in the Saffron Finch, Sicalis flaveola (Passeriformes, Aves).
- Author
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Kretschmer, Rafael, Rodrigues, Benilson Silva, Barcellos, Suziane Alves, Costa, Alice Lemos, Cioffi, Marcelo de Bello, Garnero, Analía del Valle, Gunski, Ricardo José, de Oliveira, Edivaldo Herculano Corrêa, Griffin, Darren K., Iannuzzi, Leopoldo, and Parma, Pietro
- Subjects
FINCHES ,PASSERIFORMES ,KARYOTYPES ,BACTERIAL artificial chromosomes ,SAFFRON crocus ,CHROMOSOMES ,BIODIVERSITY ,PARROTS - Abstract
Simple Summary: Detailed chromosome studies of birds, addressing both macrochromosomes and microchromosomes, have been reported only for few species. Hence, in this study, we performed investigations of chromosome evolution in the Saffron finch (Sicalis flaveola), a semi-domestic species, tolerant of human proximity and nesting in roof spaces. We also explored the organization of simple short repeats (SSR) in the genome of this species. Our results revealed that most of the Saffron finch chromosomes remained highly conserved when compared to the avian ancestral karyotype and that the SSR accumulated mainly in the microchromosomes and the short arms of Z (sex) chromosome. Finally, we compared our results with other avian species, contributing to a better understanding of the chromosome organization and evolution of the Saffron finch genome. The Saffron finch (Sicalis flaveola), a semi-domestic species, is tolerant of human proximity and nesting in roof spaces. Considering the importance of cytogenomic approaches in revealing different aspects of genomic organization and evolution, we provide detailed cytogenetic data for S. flaveola, including the standard Giemsa karyotype, C- and G-banding, repetitive DNA mapping, and bacterial artificial chromosome (BAC) FISH. We also compared our results with the sister groups, Passeriformes and Psittaciformes, bringing new insights into the chromosome and genome evolution of birds. The results revealed contrasting rates of intrachromosomal changes, highlighting the role of SSR (simple short repetition probes) accumulation in the karyotype reorganization. The SSRs showed scattered hybridization, but brighter signals were observed in the microchromosomes and the short arms of Z chromosome in S. flaveola. BACs probes showed conservation of ancestral syntenies of macrochromosomes (except GGA1), as well as the tested microchromosomes. The comparison of our results with previous studies indicates that the great biological diversity observed in Passeriformes was not likely accompanied by interchromosomal changes. In addition, although repetitive sequences often act as hotspots of genome rearrangements, Passeriformes species showed a higher number of signals when compared with the sister group Psittaciformes, indicating that these sequences were not involved in the extensive karyotype reorganization seen in the latter. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
28. Interspecies Chromosome Mapping in Caprimulgiformes, Piciformes, Suliformes, and Trogoniformes (Aves): Cytogenomic Insight into Microchromosome Organization and Karyotype Evolution in Birds.
- Author
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Kretschmer, Rafael, de Souza, Marcelo Santos, Furo, Ivanete de Oliveira, Romanov, Michael N., Gunski, Ricardo José, Garnero, Analía del Valle, de Freitas, Thales Renato Ochotorena, de Oliveira, Edivaldo Herculano Corrêa, O'Connor, Rebecca E., Griffin, Darren K., and Askjaer, Peter
- Subjects
GENE mapping ,KARYOTYPES ,RARE birds ,CHROMOSOMES ,CONVERGENT evolution ,FLUORESCENCE in situ hybridization - Abstract
Interchromosomal rearrangements involving microchromosomes are rare events in birds. To date, they have been found mostly in Psittaciformes, Falconiformes, and Cuculiformes, although only a few orders have been analyzed. Hence, cytogenomic studies focusing on microchromosomes in species belonging to different bird orders are essential to shed more light on the avian chromosome and karyotype evolution. Based on this, we performed a comparative chromosome mapping for chicken microchromosomes 10 to 28 using interspecies BAC-based FISH hybridization in five species, representing four Neoaves orders (Caprimulgiformes, Piciformes, Suliformes, and Trogoniformes). Our results suggest that the ancestral microchromosomal syntenies are conserved in Pteroglossus inscriptus (Piciformes), Ramphastos tucanus tucanus (Piciformes), and Trogon surrucura surrucura (Trogoniformes). On the other hand, chromosome reorganization in Phalacrocorax brasilianus (Suliformes) and Hydropsalis torquata (Caprimulgiformes) included fusions involving both macro- and microchromosomes. Fissions in macrochromosomes were observed in P. brasilianus and H. torquata. Relevant hypothetical Neognathae and Neoaves ancestral karyotypes were reconstructed to trace these rearrangements. We found no interchromosomal rearrangement involving microchromosomes to be shared between avian orders where rearrangements were detected. Our findings suggest that convergent evolution involving microchromosomal change is a rare event in birds and may be appropriate in cytotaxonomic inferences in orders where these rearrangements occurred. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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29. A Comprehensive Cytogenetic Analysis of Several Members of the Family Columbidae (Aves, Columbiformes).
- Author
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Kretschmer, Rafael, Furo, Ivanete de Oliveira, Gomes, Anderson José Baia, Kiazim, Lucas G., Gunski, Ricardo José, Garnero, Analía del Valle, Pereira, Jorge C., Ferguson-Smith, Malcolm A., de Oliveira, Edivaldo Herculano Corrêa, Griffin, Darren K., de Freitas, Thales Renato Ochotorena, and O'Connor, Rebecca E.
- Subjects
KARYOTYPES ,COLUMBIDAE ,BACTERIAL artificial chromosomes ,HOMOLOGOUS chromosomes ,CHROMOSOME inversions ,BIRDS ,GREATER wax moth - Abstract
The Columbidae species (Aves, Columbiformes) show considerable variation in their diploid numbers (2n = 68–86), but there is limited understanding of the events that shaped the extant karyotypes. Hence, we performed whole chromosome painting (wcp) for paints GGA1-10 and bacterial artificial chromosome (BAC) probes for chromosomes GGA11-28 for Columbina passerina, Columbina talpacoti, Patagioenas cayennensis, Geotrygon violacea and Geotrygon montana. Streptopelia decaocto was only investigated with paints because BACs for GGA10-28 had been previously analyzed. We also performed phylogenetic analyses in order to trace the evolutionary history of this family in light of chromosomal changes using our wcp data with chicken probes and from Zenaida auriculata, Columbina picui, Columba livia and Leptotila verreauxi, previously published. G-banding was performed on all these species. Comparative chromosome paint and G-banding results suggested that at least one interchromosomal and many intrachromosomal rearrangements had occurred in the diversification of Columbidae species. On the other hand, a high degree of conservation of microchromosome organization was observed in these species. Our cladistic analysis, considering all the chromosome rearrangements detected, provided strong support for L. verreauxi and P. cayennensis, G. montana and G. violacea, C. passerina and C. talpacoti having sister taxa relationships, as well as for all Columbidae species analyzed herein. Additionally, the chromosome characters were mapped in a consensus phylogenetic topology previously proposed, revealing a pericentric inversion in the chromosome homologous to GGA4 in a chromosomal signature unique to small New World ground doves. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
30. Phylogenetic Analysis and Karyotype Evolution in Two Species of Core Gruiformes: Aramides cajaneus and Psophia viridis.
- Author
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Furo, Ivanete de Oliveira, Kretschmer, Rafael, O'Brien, Patrícia C. M., Pereira, Jorge C., Ferguson-Smith, Malcolm A., and de Oliveira, Edivaldo Herculano Corrêa
- Subjects
KARYOTYPES ,CHROMOSOMAL rearrangement ,MITOCHONDRIAL DNA ,SPECIES ,BIOLOGICAL evolution ,CYTOGENETICS - Abstract
Gruiformes is a group with phylogenetic issues. Recent studies based on mitochondrial and genomic DNA have proposed the existence of a core Gruiformes, consisting of five families: Heliornithidae, Aramidae, Gruidae, Psophiidae and Rallidae. Karyotype studies on these species are still scarce, either by conventional staining or molecular cytogenetics. Due to this, this study aimed to analyze the karyotype of two species (Aramides cajaneus and Psophia viridis) belonging to families Rallidae and Psopiidae, respectively, by comparative chromosome painting. The results show that some chromosome rearrangements in this group have different origins, such as the association of GGA5/GGA7 in A. cajaneus, as well as the fission of GGA4p and association GGA6/GGA7, which place P. viridis close to Fulica atra and Gallinula chloropus. In addition, we conclude that the common ancestor of the core Gruiformes maintained the original syntenic groups found in the putative avian ancestral karyotype. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
31. Chromosome Painting in Neotropical Long- and Short-Tailed Parrots (Aves, Psittaciformes): Phylogeny and Proposal for a Putative Ancestral Karyotype for Tribe Arini.
- Author
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Furo, Ivanete De Oliveira, Kretschmer, Rafael, O'brien, Patrícia C. M., Pereira, Jorge C., Garnero, Analía Del Valle, Gunski, Ricardo J., Ferguson-Smith, Malcolm A., and De Oliveira, Edivaldo Herculano Corrêa
- Subjects
PARROTS ,CHROMOSOME analysis ,KARYOTYPES ,PHYLOGENY ,MOLECULAR probes - Abstract
Most Neotropical Psittacidae have a diploid number of 2n = 70, and a dichotomy in chromosome patterns. Long-tailed species have biarmed macrochromosomes, while short-tailed species have telo/acrocentric macrochromosomes. However, the use of chromosome painting has demonstrated that karyotype evolution in Psittacidae includes a high number of inter/intrachromosomal rearrangements. To determine the phylogeny of long- and short-tailed species, and to propose a putative ancestral karyotype for this group, we constructed homology maps of Pyrrhura frontalis (PFR) and Amazona aestiva (AAE), belonging to the long- and short-tailed groups, respectively. Chromosomes were analyzed by conventional staining and fluorescent in situ hybridization using whole chromosome paints of Gallusgallus and Leucopternis albicollis. Conventional staining showed a karyotype with 2n = 70 in both species, with biarmed macrochromosomes in PFR and telo/acrocentric chromosomes in AAE. Comparison of the results with the putative avian ancestral karyotype (PAK) showed fusions in PFR of PAK1p/PAK4q (PFR1) and PAK6/PAK7 (PFR6) with a paracentric inversion in PFR6. However, in AAE, there was only the fusion between PAK6/7 (AAE7) with a paracentric inversion. Our results indicate that PFR retained a more basal karyotype than long-tailed species previously studied, and AAE a more basal karyotype for Neotropical Psittacidae analyzed so far. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
32. Meningiomas: An Overview of the Landscape of Copy Number Alterations in Samples from an Admixed Population.
- Author
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Silveira, Michele Amaral da, Ferreira, Wallax Augusto Silva, Amorim, Carolina Koury Nassar, Brito, José Reginaldo Nascimento, Kayath, André Salim, Sagica, Fernanda do Espirito Santo, and de Oliveira, Edivaldo Herculano Corrêa
- Subjects
- *
INTRACRANIAL tumors , *DNA repair , *GENETIC regulation , *CHI-squared test , *COPYING - Abstract
Meningiomas are considered the most common intracranial tumors, affecting mainly women. Studies in mixed populations can be of great importance to clarify issues related to the genetic diversity of tumors and their development. Considering that data obtained from analyses of the profile of copy number alterations (CNA) have been a useful diagnostic indicator for many types of tumors and that meningiomas show a complex pattern of gains and losses in the number of copies, our objective was to analyze the CNA profile in 33 samples of meningiomas of different histological grades (WHO Grade I-III) from patients in a city located in the Amazon region of Brazil, using aCGH. We found that the female to male ratio was 3 : 1. The aCGH analysis revealed a total of 2304 CNA, with an average of 69.8 ± 57.4 per case, of which 1197 were gains (52%), 926 were losses (40.2%), 105 were amplifications (4. 5%), and 76 were deletions (3.3%). A significant relationship was observed between the type of CNA and the degree of the tumor (chi-square test: χ2 = 65,844; p < 0.0001 ; contingency coefficient: C = 0.1772; p < 0.0001). Evaluating the recurrent changes in at least 50% of the samples, we observe as the most frequent losses of the segments 22q13.1-q13.2 (82%), 1p35.3 (76%), and 14q13.1-q13.2 (67%), involving all histopathological grades. The analysis of these regions showed the inclusion of genes with functions such as regulation, maintenance of cell survival, reorganization of the cytoskeleton, cell signaling, and DNA repair, among others. However, overall, the profiles observed in meningiomas of this admixed population were very similar to the ones observed in Caucasian groups. An interesting finding was a recurrent gain of 8p22 observed only in grade I meningiomas, a region which includes DLC1, a suppressor candidate gene probably implicated in the developments or progression of meningiomas, usually found deleted, when related to CNAs. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
33. Chromosome painting in neotropical long-and short-tailed parrots (Aves, Psittaciformes): Phylogeny and proposal for a putative ancestral karyotype for tribe arini
- Author
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Edivaldo Herculano Corrêa de Oliveira, Rafael Kretschmer, Analía Del Valle Garnero, Patricia C. M. O´Brien, Ivanete de Oliveira Furo, Ricardo José Gunski, Malcolm A. Ferguson-Smith, Jorge C. Pereira, Kretschmer, Rafael [0000-0002-6856-2152], Pereira, Jorge C [0000-0002-1472-1613], de Oliveira, Edivaldo Herculano Corrêa [0000-0001-6315-3352], and Apollo - University of Cambridge Repository
- Subjects
0301 basic medicine ,Pyrrhura ,Papagaios / anatomia & histologia ,lcsh:QH426-470 ,Tribe (biology) ,phylogeny ,Article ,Psittaciformes ,03 medical and health sciences ,Phylogenetics ,Centromere ,Genetics ,Cromossomos / gen?tica ,Pyrrhura frontalis ,Psittacidae ,Genetics (clinical) ,Colora??o Cromoss?mica / m?todos ,Chromosomal inversion ,Cariotipagem ,biology ,Chromosome ,Karyotype ,biology.organism_classification ,Amazona aestiva ,animal_sciences_zoology ,putative ancestral karyotype ,lcsh:Genetics ,030104 developmental biology ,Filogenia ,Evolutionary biology ,Papagaios / classifica??o ,Microchromosome ,Chromosome painting ,parrots ,Cari?tipo ,Ploidy ,chromosome painting - Abstract
This research was partially funded by a grant to EHCO from CNPq (309699/2015) and to MAFS from the Wellcome Trust in support of the Cambridge Resource Centre for comparative genomics. Universidade Federal do Par?. Programa de P?s-Gradua??o em Gen?tica e Biologia Molecular. Bel?m, PA, Brazil / Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Laborat?rio de Cultura de Tecidos e Citogen?tica. Ananindeua, PA, Brasil / Cambridge Resource Centre for Comparative Genomics. Cambridge, ES, UK. Universidade Federal do Rio Grande do Sul. Programa de P?s-Gradua??o em Gen?tica e Biologia Molecular. Porto Alegre, RS, Brazil. Cambridge Resource Centre for Comparative Genomics. Cambridge, ES, UK. Cambridge Resource Centre for Comparative Genomics. Cambridge, ES, UK. Universidade Federal do Pampa. Programa de P?s-Gradua??o em Ci?ncias Biol?gicas. Laborat?rio de Diversidade Gen?tica Animal. S?o Gabriel, RS, Brazil. Universidade Federal do Pampa. Programa de P?s-Gradua??o em Ci?ncias Biol?gicas. Laborat?rio de Diversidade Gen?tica Animal. S?o Gabriel, RS, Brazil. Cambridge Resource Centre for Comparative Genomics. Cambridge, ES, UK. Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Laborat?rio de Cultura de Tecidos e Citogen?tica. Ananindeua, PA, Brasil / Universidade Federal do Par?. Instituto de Ci?ncias Exatas e Naturais. Faculdade de Ci?ncias Naturais. Bel?m, PA, Brazil. Abstract: Most Neotropical Psittacidae have a diploid number of 2n = 70, and a dichotomy in chromosome patterns. Long-tailed species have biarmed macrochromosomes, while short-tailed species have telo/acrocentric macrochromosomes. However, the use of chromosome painting has demonstrated that karyotype evolution in Psittacidae includes a high number of inter/intrachromosomal rearrangements. To determine the phylogeny of long- and short-tailed species, and to propose a putative ancestral karyotype for this group, we constructed homology maps of Pyrrhura frontalis (PFR) and Amazona aestiva (AAE), belonging to the long- and short-tailed groups, respectively. Chromosomes were analyzed by conventional staining and fluorescent in situ hybridization using whole chromosome paints of Gallus gallus and Leucopternis albicollis. Conventional staining showed a karyotype with 2n = 70 in both species, with biarmed macrochromosomes in PFR and telo/acrocentric chromosomes in AAE. Comparison of the results with the putative avian ancestral karyotype (PAK) showed fusions in PFR of PAK1p/PAK4q (PFR1) and PAK6/PAK7 (PFR6) with a paracentric inversion in PFR6. However, in AAE, there was only the fusion between PAK6/7 (AAE7) with a paracentric inversion. Our results indicate that PFR retained a more basal karyotype than long-tailed species previously studied, and AAE a more basal karyotype for Neotropical Psittacidae analyzed so far.
- Published
- 2018
34. Comparative cytogenetics of microsatellite distribution in two tetra fishes Astyanax bimaculatus (Linnaeus, 1758) and Psalidodon scabripinnis (Jenyns, 1842).
- Author
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de Sousa RPC, Furo IO, Silva-Oliveira GC, de Sousa-Felix RC, Bessa-Brito CD, Mello RC, Sampaio I, Artoni RF, de Oliveira EHC, and Vallinoto M
- Subjects
- Animals, Cytogenetics, Karyotyping, Centromere, Microsatellite Repeats genetics, Characidae genetics
- Abstract
Background: The main cytogenetic studies of the Characidae family comprise the genera Astyanax and Psalidodon involving the use of repetitive DNA probes. However, for the microsatellite classes, studies are still scarce and the function of these sequences in the genome of these individuals is still not understood. Thus, we aimed to analyze and compare the distribution of microsatellite sequences in the species Astyanax bimaculatus and Psalidodon scabripinnis ., Methods: We collected biopsies from the fins of A. bimaculatus and P. scabripinnis to perform cell culture, followed by chromosome extraction, and mapped the distribution of 14 microsatellites by FISH in both species., Results and Discussion: The diploid number observed for both species was 2n = 50, with an acrocentric B microchromosome in A. bimaculatus and a metacentric B chromosome in P. scabripinnis . Regarding FISH, 11 probes hybridized in the karyotype of A. bimaculatus mainly in centromeric regions, and 13 probes hybridized in P. scabripinnis , mainly in telomeric regions, in addition to a large accumulation of microsatellite hybridization on its B chromosome., Conclusion: Comparative FISH mapping of 14 microsatellite motifs revealed different patterns of distribution both in autosomes and supernumerary chromosomes of A. bimaculatus and P. scabripinnis , suggesting independent evolutionary processes in each of these species, representing excellent data on chromosome rearrangements and cytotaxonomy., Competing Interests: The authors declare there are no competing interests., (©2024 de Sousa et al.)
- Published
- 2024
- Full Text
- View/download PDF
35. Methylmercury-induced cytotoxicity and oxidative biochemistry impairment in dental pulp stem cells: the first toxicological findings.
- Author
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de Souza-Rodrigues RD, Puty B, Bonfim L, Nogueira LS, Nascimento PC, Bittencourt LO, Couto RSD, Barboza CAG, de Oliveira EHC, Marques MM, and Lima RR
- Abstract
Background: Methylmercury (MeHg) is a potent toxicant able to harm human health, and its main route of contamination is associated with the consumption of contaminated fish and other seafood. Moreover, dental amalgams are also associated with mercury release on human saliva and may contribute to the accumulation of systemic mercury. In this way, the oral cavity seems to be the primary location of exposure during MeHg contaminated food ingestion and dental procedures but there is a lack of literature about its effects on dental tissues and the impact of this toxicity on human health. In this way, this study aimed to analyze the effects of different doses of MeHg on human dental pulp stem cells after short-term exposure., Methods: Dental pulp stem cells from human exfoliated deciduous teeth (SHED) were treated with 0.1, 2.5 and 5 µM of MeHg during 24 h. The MeHg effects were assessed by evaluating cell viability with Trypan blue exclusion assay. The metabolic viability was indirectly assessed by MTT reduction assay. In order to evaluate an indicative of antioxidant defense impairment, cells exposed to 0.1 and 5 µM MeHg were tested by measuring glutathione (GSH) level., Results: It was observed that cell viability decreased significantly after exposure to 2.5 and 5 µM of MeHg, but the metabolic viability only decreased significantly at 5 µM MeHg exposure, accompanied by a significant decrease in GSH levels. These results suggest that an acute exposure of MeHg in concentrations higher than 2.5 µM has cytotoxic effects and reduction of antioxidant capacity on dental pulp stem cells., Competing Interests: The authors declare that they have no competing interests., (© 2021 Souza-Rodrigues et al.)
- Published
- 2021
- Full Text
- View/download PDF
36. Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes).
- Author
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Kretschmer R, de Oliveira TD, de Oliveira Furo I, Oliveira Silva FA, Gunski RJ, Del Valle Garnero A, de Bello Cioffi M, de Oliveira EHC, and de Freitas TRO
- Abstract
An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species.
- Published
- 2018
- Full Text
- View/download PDF
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