1. An efficient single-cell based method for linking human T cell phenotype to T cell receptor sequence and specificity
- Author
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Julia Puchan, Christian E. Busse, Sandro Hoffmann, Benjamin Mordmüller, Rebecca Hundsdorfer, Ilka Wahl, Peter G. Kremsner, Hedda Wardemann, and Stephen L. Hoffman
- Subjects
Adult ,CD4-Positive T-Lymphocytes ,Male ,Receptors, Antigen, T-Cell, alpha-beta ,T cell ,Immunology ,T-cell receptor ,lnfectious Diseases and Global Health Radboud Institute for Molecular Life Sciences [Radboudumc 4] ,Computational biology ,CD8-Positive T-Lymphocytes ,Biology ,Phenotype ,Immune system ,medicine.anatomical_structure ,Gene duplication ,Expression cloning ,medicine ,Humans ,Immunology and Allergy ,Female ,Single-Cell Analysis ,Gene ,CD8 - Abstract
Contains fulltext : 248576.pdf (Publisher’s version ) (Open Access) Single-cell antigen-receptor gene amplification and sequencing platforms have been used to characterize T cell receptor (TCR) repertoires but typically fail to generate paired full-length gene products for direct expression cloning and do not enable linking this data to cell phenotype information. To overcome these limitations, we established a high-throughput platform for the quantitative and qualitative analysis of human TCR repertoires that provides insights into the clonal and functional composition of human CD4(+) and CD8(+) αβ T cells at the molecular and cellular level. The strategy is a powerful tool to qualitatively assess differences between antigen receptors of phenotypically defined αβ T cell subsets, e.g. in immune responses to cancer, vaccination, or infection, and in autoimmune diseases.
- Published
- 2022