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6 results on '"Dorpe, Jo Van"'

1. Additional file 4 of Shallow whole-genome sequencing of plasma cell-free DNA accurately differentiates small from non-small cell lung carcinoma

Author

Raman, Lennart, Malaïka Van Der Linden, Eecken, Kim Van Der, Vermaelen, Karim, Ingel Demedts, Surmont, Veerle, Himpe, Ulrike, Franceska Dedeurwaerdere, Ferdinande, Liesbeth, Lievens, Yolande, Claes, Kathleen, Menten, Björn, and Dorpe, Jo Van

Subjects
respiratory system
Abstract

Additional file 4. Supplementary single-end copy number profiles, containing all in-house lung cancer copy number profiles.

Published
2020
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2. Additional file 2 of Shallow whole-genome sequencing of plasma cell-free DNA accurately differentiates small from non-small cell lung carcinoma

Author

Raman, Lennart, Malaïka Van Der Linden, Eecken, Kim Van Der, Vermaelen, Karim, Ingel Demedts, Surmont, Veerle, Himpe, Ulrike, Franceska Dedeurwaerdere, Ferdinande, Liesbeth, Lievens, Yolande, Claes, Kathleen, Menten, Björn, and Dorpe, Jo Van

Abstract

Additional file 2: Supplementary methods. The copy number profile abnormality score & Details on predictive modeling.

Published
2020
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3. Additional file 3 of Shallow whole-genome sequencing of plasma cell-free DNA accurately differentiates small from non-small cell lung carcinoma

Author

Raman, Lennart, Malaïka Van Der Linden, Eecken, Kim Van Der, Vermaelen, Karim, Ingel Demedts, Surmont, Veerle, Himpe, Ulrike, Franceska Dedeurwaerdere, Ferdinande, Liesbeth, Lievens, Yolande, Claes, Kathleen, Menten, Björn, and Dorpe, Jo Van

Abstract

Additional file 3: Figure S1 Performance comparison between the copy number profile abnormality (CPA) score and previously published alternatives, applied to all liquid biopsies. Figure S2 Tumor heterogeneity analysis, applied to patients with a liquid (LB) and solid biopsy (SB) taken no longer than 50 days apart. Figure S3 Cluster analysis, applied to all liquid biopsies. Figure S4 Prediction accuracy in relation to abnormality cutoff stringency. Figure S5 Performance of predicting histology by single-end (SE) versus paired-end (PE) sequencing. Figure S6 Copy number profiles of a relapsed patient with small cell transformation/a second primary tumor.

Published
2020
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4. Additional file 1 of Shallow whole-genome sequencing of plasma cell-free DNA accurately differentiates small from non-small cell lung carcinoma

Author

Raman, Lennart, Malaïka Van Der Linden, Eecken, Kim Van Der, Vermaelen, Karim, Ingel Demedts, Surmont, Veerle, Himpe, Ulrike, Franceska Dedeurwaerdere, Ferdinande, Liesbeth, Lievens, Yolande, Claes, Kathleen, Menten, Björn, and Dorpe, Jo Van

Abstract

Additional file 1: Table S1 Patient information. Table S2 Sample information.

Published
2020
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5. Additional file 5 of Shallow whole-genome sequencing of plasma cell-free DNA accurately differentiates small from non-small cell lung carcinoma

Author

Raman, Lennart, Malaïka Van Der Linden, Eecken, Kim Van Der, Vermaelen, Karim, Ingel Demedts, Surmont, Veerle, Himpe, Ulrike, Franceska Dedeurwaerdere, Ferdinande, Liesbeth, Lievens, Yolande, Claes, Kathleen, Menten, Björn, and Dorpe, Jo Van

Abstract

Additional file 5. Supplementary paired-end copy number profiles, containing a thorough patient-wise comparison of paired single/paired-end copy number profiles. Prediction probabilities are shown in addition.

Published
2020
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6. Additional file 1: of Neo-adjuvant treatment of adenocarcinoma and squamous cell carcinoma of the cervix results in significantly different pathological complete response rates

Author

Couvreur, Karen, Naert, Eline, Jaeghere, Emiel De, Tummers, Philippe, Makar, Amin, Visschere, Pieter De, Bockstal, Mieke Van, Dorpe, Jo Van, Neve, Wilfried De, Denys, Hannelore, and Vandecasteele, Katrien

Subjects
carbohydrates (lipids), stomatognathic diseases, animal diseases, digestive system, digestive system diseases
Abstract

Table S1. Relapse pattern in the entire cohort and neo-adjuvant chemoradiation group. Table S2. Univariate analysis of DSS. Table S3. Multivariate analysis of DSS. (DOCX 26 kb)

Published
2018
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