391 results on '"José de la Fuente"'
Search Results
2. Phylogenomic analysis supports Mycobacterium tuberculosis transmission between humans and elephants
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Rajesh Man Rajbhandari, Rajindra Napit, Prajwol Manandhar, Roji Raut, Anupama Gurung, Ajit Poudel, Nisha Shrestha, Amir Sadaula, Dibesh Karmacharya, Christian Gortázar, Paulo Célio Alves, José de la Fuente, and João Queirós
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General Veterinary - Abstract
IntroductionTuberculosis is an infectious disease caused by a group of acid-fast bacilli known as Mycobacterium tuberculosis complex (MTC), which has a major impact on humans. Transmission of MTC across the human-animal interface has been demonstrated by several studies. However, the reverse zoonotic transmission from humans to animals (zooanthroponosis) has often been neglected.MethodsIn this study, we used Nanopore MinION and Illumina MiSeq approaches to sequence the whole genome of M. tuberculosis strains isolated from two deceased Asian elephants (Elephas maximus) and one human in Chitwan, Nepal. The evolutionary relationships and drug resistance capacity of these strains were assessed using the whole genome data generated by the stand-alone tool Tb-Profiler. Phylogenomic trees were also constructed using a non-synonymous SNP alignment of 2,596 bp, including 94 whole genome sequences representative of the previously described M. tuberculosis lineages from elephants worldwide (lineages 1 and 4) and from humans in Nepal (lineages 1, 2 and 3).Results and DiscussionThe new genomes achieved an average coverage of 99.6%, with an average depth of 55.67x. These M. tuberculosis strains belong to lineage 1 (elephant DG), lineage 2 (elephant PK) and lineage 4 (human), and none of them were found to have drug-resistant variants. The elephant-derived isolates were evolutionarily closely related to human-derived isolates previously described in Nepal, both in lineages 1 and 2, providing additional support for zooanthroponosis or bidirectional transmission between humans and elephants. The human-derived isolate clustered together with other published human isolates from Argentina, Russia and the United Kingdom in the lineage 4 clade. This complex multi-pathogen, multi-host system is challenging and highlights the need for a One Health approach to tuberculosis prevention and control at human-animal interface, particularly in regions where human tuberculosis is highly endemic.
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- 2023
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3. Antibody isotype epitope mapping of SARS‐CoV‐2 Spike RBD protein: Targets for COVID‐19 symptomatology and disease control
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Marinela Contreras, Joaquín Vicente, José Joaquín Cerón, Silvia Martinez Subiela, José Miguel Urra, Francisco J. Rodríguez‐del‐Río, Elisa Ferreras‐Colino, Rita Vaz‐Rodrigues, Isabel G. de Fernández de Mera, Sandra Antunes, Ana Domingos, Christian Gortázar, and José de la Fuente
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Immunology ,Immunology and Allergy - Published
- 2023
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4. Additional considerations for anti-tick vaccine research
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José De la Fuente, Marinela Contreras Rojo, Ministerio de Ciencia, Innovación y Universidades (España), European Commission, Agencia Estatal de Investigación (España), and Junta de Comunidades de Castilla-La Mancha
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Pharmacology ,Vaccines ,Ticks ,Drug Discovery ,Immunology ,Animals ,Humans ,Molecular Medicine ,Antigens ,Tick Infestations - Abstract
The part of the research included in this paper was supported by the Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación MCIN/AEI/10.13039/501100011033, Spain and EU-FEDER (Grant BIOGAL PID2020-116761GB-I00) and the Consejería de Educación, Cultura y Deportes, JCCM, Spain, project CCM17-PIC-036 (SBPLY/17/180501/000185).
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- 2022
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5. Vaccinomics: a future avenue for vaccine development against emerging pathogens
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José de la Fuente, Marinela Contreras, and Junta de Comunidades de Castilla-La Mancha
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Pharmacology ,Vaccines ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Immunology ,COVID-19 ,Vaccine Efficacy ,Biology ,Communicable Diseases, Emerging ,Virology ,Emerging pathogen ,Immunity ,Vaccine Development ,Drug Discovery ,Humans ,Molecular Medicine ,Antigens ,Pandemics ,Pathogen - Abstract
[Introduction]: Vaccines are a major achievement in medical sciences, but the development of more effective vaccines against infectious diseases is essential for prevention and control of emerging pathogens worldwide. The application of omics technologies has advanced vaccinology through the characterization of host-vector-pathogen molecular interactions and the identification of candidate protective antigens. However, major challenges such as host immunity, pathogen and environmental factors, vaccine efficacy and safety need to be addressed. Vaccinomics provides a platform to address these challenges and improve vaccine efficacy and safety., [Areas covered]: In this review, we summarize current information on vaccinomics and propose quantum vaccinomics approaches to further advance vaccine development through the identification and combination of antigen protective epitopes, the immunological quantum. The COVID-19 pandemic caused by SARS-CoV-2 is an example of emerging infectious diseases with global impact on human health., [Expert opinion]: Vaccines are required for the effective and environmentally sustainable intervention for the control of emerging infectious diseases worldwide. Recent advances in vaccinomics provide a platform to address challenges in improving vaccine efficacy and implementation. As proposed here, quantum vaccinomics will contribute to vaccine development, efficacy, and safety by facilitating antigen combinations to target pathogen infection and transmission in emerging infectious diseases., The investigation on α-Gal was partially supported by the Consejería de Educación, Cultura y Deportes, JCCM, Spain, project CCM17-PIC-036 (SBPLY/17/180501/000185).
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- 2021
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6. CoQ
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Javier, Frontiñán-Rubio, Emilio, Llanos-González, Sonia, García-Carpintero, Juan Ramón, Peinado, Inmaculada, Ballesteros-Yáñez, Margarita Villar, Rayo, José, de la Fuente, Víctor M, Pérez-García, Luis A, Perez-Romasanta, Marcos, Malumbres, Francisco J, Alcaín, and Mario, Durán-Prado
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Most monotherapies available against glioblastoma multiforme (GBM) target individual hallmarks of this aggressive brain tumor with minimal success. In this article, we propose a therapeutic strategy using coenzyme QXenografts of U251 cells in nu/nu mice were used to assay tumor growth, hypoxia, angiogenesis, and inflammation. An orthotopic model was used to explore microglial infiltration, tumor growth, and invasion into the brain parenchyma. Cell proliferation, migration, invasion, proteome remodeling, and secretome were assayed in vitro. Conditioned media were used to assay angiogenesis, monocyte chemoattraction, and differentiation into macrophages in vitro.CoQCoQ
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- 2022
7. A Quantum Vaccinomics Approach for the Design and Production of MSP4 Chimeric Antigen for the Control of
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José, de la Fuente, Alberto, Moraga-Fernández, Pilar, Alberdi, Sandra, Díaz-Sánchez, Olga, García-Álvarez, Rubén, Fernández-Melgar, and Marinela, Contreras
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- 2022
8. Art-science multidisciplinary collaborations to address the scientific challenges posed by COVID-19
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José De la Fuente, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), European Commission, Fuente, José de la [0000-0001-7383-9649], and Fuente, José de la
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Arte proteico ,Mixed-methods ,Multidisciplinary ,Art-based method ,SARS-CoV-2 ,Vaccination ,Métodos mixtos ,COVID-19 ,General Medicine ,Método basado en el arte método ,Multidisciplinar ,Protean art ,Animals ,Humans ,Pandemics ,COVID - Abstract
The ongoing coronavirus pandemic COVID-19 constitutes a scientific and social challenge. The application of mixed-methods research with multidisciplinary collaborations increases the success of experimental design and interpretation of results to approach scientific challenges. The objective is to develop and implement protean art algorithms with interactions between artists and scientists for scientific research in areas of molecular biology, immunology, ecology and biomedicine. In this perspective, artists were invited to contribute pieces related to the pandemic, and scientists were then challenged to contribute their view and proposed research inspired by artist contribution to face COVID-19 scientific challenges. Proposed research objectives inspired by artist contributions contribute to approach COVID-19 scientific and social challenges with results that may translate into new diagnosis and control interventions. The proposed research objectives approach vaccine protective mechanisms and the development of nutritional interventions with possible impact on boosting protective response to vaccination, the impact of fuel pollutants on host immunity and virus transmission, the possible role of ectoparasite vectors in the appearance of SARS-CoV-2 variants and virus transmission, collaboration between different sectors to contribute to virus surveillance and reduce risks of contagion, characterization of the incidence of zoonotic diseases during and after the COVID-19 pandemic in relation to modifications in the interactions between humans and reservoir animal species, evaluation of the risks associated with sexual or congenital transmission of SARS-CoV-2, development of new methods for the easy and rapid detection of very low SARS-CoV-2 virus amounts in infected but asymptomatic individuals, and understanding society perceptions about the socio-ecological relationships between decoupled environments and the risks and effects of pandemics. This approach may be used to promote social participation in science through combined scientific and artistic perspectives with impact on science and society., Part of the reported ongoing studies related to alpha-Gal are supported by the Ministerio de Ciencia e Innovacion/Agencia Estatal de Investigacion MCIN/AEI/10.13039/ 501100011033, Spain and EU-FEDER [Grant BIOGAL PID2020-116761GB-I00].
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- 2022
9. Zebrafish Animal Model for the Study of Allergic Reactions in Response to Tick Saliva Biomolecules
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José de la Fuente, Almudena González-García, Marinela Contreras, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), and European Commission
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Mammals ,Ixodes ,General Immunology and Microbiology ,General Chemical Engineering ,General Neuroscience ,Immunoglobulin E ,General Biochemistry, Genetics and Molecular Biology ,Models, Animal ,Animals ,Humans ,Glycolipids ,Saliva ,Anaphylaxis ,Food Hypersensitivity ,Zebrafish - Abstract
Ticks are arthropod vectors that cause disease by pathogen transmission and whose bites could be related to allergic reactions impacting human health worldwide. In some individuals, high levels of immunoglobulin E antibodies against the glycan Galα1-3Galβ1-(3)4GlcNAc-R (α-Gal) have been induced by tick bites. Anaphylactic reactions mediated by glycoproteins and glycolipids containing the glycan α-Gal, present in tick saliva, are related to alpha-Gal syndrome (AGS) or mammalian meat allergy. Zebrafish (Danio rerio) has become a widely used vertebrate model for the study of different pathologies. In this study, zebrafish was used as a model for the study of allergic reactions in response to α-Gal and mammalian meat consumption because, like humans, they do not synthesize this glycan. For this purpose, behavioral patterns and hemorrhagic anaphylactic-type allergic reactions in response to Ixodes ricinus tick saliva and mammalian meat consumption was evaluated. This experimental approach allows the obtention of valid data that support the zebrafish animal model for the study of tick-borne allergies including AGS., This work was supported by Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación MCIN/AEI/10.13039/501100011033, Spain and EU-FEDER (Grant BIOGAL PID2020-116761GB-I00). Marinela Contreras is funded by the Ministerio de Ciencia, Innovación y Universidades, Spain, grant IJC2020-042710-I.
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- 2022
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10. One Health Approach to Identify Research Needs on
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Agustín, Estrada-Peña, Alina Rodríguez, Mallón, Sergio, Bermúdez, José, de la Fuente, Ana, Domingos, Mario Pablo Estrada, García, Marcelo B, Labruna, Octavio, Merino, Juan, Mosqueda, Santiago, Nava, Ricardo Lleonart, Cruz, Matías, Szabó, Evelina, Tarragona, and José M, Venzal
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We aim to provide a harmonized view of the factors that affect the survival and promote the spread of
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- 2022
11. <scp>HEPA</scp> filters of portable air cleaners as a tool for the surveillance of <scp>SARS‐CoV</scp> ‐2
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Isabel G. Fernández de Mera, Carmen Granda, Florentina Villanueva, Marta Sánchez‐Sánchez, Alberto Moraga‐Fernández, Christian Gortázar, José de la Fuente, Universidad Politécnica de Madrid, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Comunidad de Madrid, and Ministerio de Economía y Competitividad (España)
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Aerosols ,Serum ,COVID-19 biomarkers ,Ferritin ,Interferometric optical detection method ,Surveillance ,Environmental Engineering ,SARS-CoV-2 ,Public Health, Environmental and Occupational Health ,COVID-19 ,Respiratory Aerosols and Droplets ,SARS-CoV- 2 ,Building and Construction ,HEPA filter ,Air Filters ,Air Pollution, Indoor ,Immunoglobulin ,Indoor air ,Portable air cleaners ,Humans ,RNA, Viral - Abstract
Studies about the identification of SARS-CoV-2 in indoor aerosols have been conducted in hospital patient rooms and to a lesser extent in nonhealthcare environments. In these studies, people were already infected with SARS-CoV-2. However, in the present study, we investigated the presence of SARS-CoV-2 in HEPA filters housed in portable air cleaners (PACs) located in places with apparently healthy people to prevent possible outbreaks. A method for detecting the presence of SARS-CoV-2 RNA in HEPA filters was developed and validated. The study was conducted for 13 weeks in three indoor environments: school, nursery, and a household of a social health center, all in Ciudad Real, Spain. The environmental monitoring of the presence of SARS-CoV-2 was conducted in HEPA filters and other surfaces of these indoor spaces for a selective screening in asymptomatic population groups. The objective was to limit outbreaks at an early stage. One HEPA filter tested positive in the social health center. After analysis by RT-PCR of SARS-CoV-2 in residents and healthcare workers, one worker tested positive. Therefore, this study provides direct evidence of virus-containing aerosols trapped in HEPA filters and the possibility of using these PACs for environmental monitoring of SARS-CoV-2 while they remove airborne aerosols and trap the virus., This work was supported by the Research and Innovation program of Universidad Politécnica de Madrid (https://www.upm.es/Investigacion/Programa_Propio_UPM) under the project with reference: VIMPACTO20MHB, the project HERON with reference TEC2017-84846-R supported by the Spanish Ministry of economy and competitiveness, and within the framework of the project COVIDTECH-CM of the regional government of Madrid (Spain).
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- 2022
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12. Low NETosis Induced in
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Sara, Artigas-Jerónimo, Almudena, González-García, José, de la Fuente, Valeria, Blanda, Mojtaba, Shekarkar Azgomi, Margarita, Villar, Leila, Mohammadnezhad, Francesca, Grippi, Alessandra, Torina, and Guido, Sireci
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- 2022
13. Frankenbacteriosis targeting interactions between pathogen and symbiont to control infection in the tick vector
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Lorena Mazuecos, Pilar Alberdi, Angélica Hernández-Jarguín, Marinela Contreras, Margarita Villar, Alejandro Cabezas-Cruz, Ladislav Simo, Almudena González-García, Sandra Díaz-Sánchez, Girish Neelakanta, Sarah I. Bonnet, Erol Fikrig, and José de la Fuente
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Multidisciplinary - Published
- 2023
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14. The Correlation between Subolesin-Reactive Epitopes and Vaccine Efficacy
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Marinela Contreras, Paul D. Kasaija, Fredrick Kabi, Swidiq Mugerwa, José De la Fuente, National Agricultural Research Foundation, Government of Uganda, Ministerio de Ciencia, Innovación y Universidades (España), and Agencia Estatal de Investigación (España)
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Pharmacology ,Vacuna ,Immunology ,Garrapata ,Ganado ,Q38 ,Infectious Diseases ,subolesin ,epitope ,vaccine ,cattle ,quantum vaccinomics ,tick ,Drug Discovery ,Vacunación cuántica ,Pharmacology (medical) ,Epitope ,Cattle ,Subolesin ,Vaccine ,Quantum vaccinomics ,Tick - Abstract
This article belongs to the Special Issue New Approaches in Vaccine Development for the Control of Vectors and Vector-Borne Diseases., Vaccination is an environmentally-friendly alternative for tick control. The tick antigen Subolesin (SUB) has shown protection in vaccines for the control of multiple tick species in cattle. Additionally, recent approaches in quantum vaccinomics have predicted SUB-protective epitopes and the peptide sequences involved in protein–protein interactions in this tick antigen. Therefore, the identification of B-cell–reactive epitopes by epitope mapping using a SUB peptide array could be essential as a novel strategy for vaccine development. Subolesin can be used as a model to evaluate the effectiveness of these approaches for the identification of protective epitopes related to vaccine protection and efficacy. In this study, the mapping of B-cell linear epitopes of SUB from three different tick species common in Uganda (Rhipicephalus appendiculatus, R. decoloratus, and Amblyomma variegatum) was conducted using serum samples from two cattle breeds immunized with SUB-based vaccines. The results showed that in cattle immunized with SUB from R. appendiculatus (SUBra) all the reactive peptides (Z-score > 2) recognized by IgG were also significant (Z-ratio > 1.96) when compared to the control group. Additionally, some of the reactive peptides recognized by IgG from the control group were also recognized in SUB cocktail–immunized groups. As a significant result, cattle groups that showed the highest vaccine efficacy were Bos indicus immunized with a SUB cocktail (92%), and crossbred cattle were immunized with SUBra (90%) against R. appendiculatus ticks; the IgG from these groups recognized overlapping epitopes from the peptide SPTGLSPGLSPVRDQPLFTFRQVGLICERMMKERESQIRDEYDHVLSAKLAEQYDTFVKFTYDQKRFEGATPSYLS (Z-ratio > 1.96), which partially corresponded to a Q38 peptide and the SUB protein interaction domain. These identified epitopes could be related to the protection and efficacy of the SUB-based vaccines, and new chimeras containing these protective epitopes could be designed using this new approach., This study was funded by the National Agricultural Research Organization (NARO) of Uganda. Marinela Contreras receives funding from the Ministerio de Ciencia, Innovación y Universidades, Spain (grant IJC2020-042710-I).
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- 2022
15. Identification and Characterization of Probiotics Isolates from Indigenous Chicken (Gallus domesticus) of Nepal
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Mohan Gupta, Roji Raut, Sulochana Manandhar, Ashok Chaudhary, Ujwal Shrestha, Saubhagya Dangol, Sudarshan G. C., Keshab Raj Budha, Gaurab Karki, Sandra Díaz-Sánchez, Christian Gortazar, José de la Fuente, Pragun Rajbhandari, Prajwol Manandhar, Rajindra Napit, and Dibesh Karmacharya
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Multidisciplinary - Abstract
Background Excessive and irrational use of antibiotics as growth promoters in poultry has been one of key factors contributing to increased emergence of antibiotics resistant bacteria. Several alternatives for antibiotic growth promoters are being sought, and the search for effective probiotics to be used as feed additives is amongst the promising ones. Our study aimed to isolate and test potential probiotics bacteria from cloacal swabs of various indigenous chicken (Gallus domesticus) breeds from rural outskirts of the Kathmandu valley (Nepal). Methods Selective isolation of probiotics was conducted by micro-aerophilic enrichment of sample in MRS Broth at 37°C, followed by culturing on MRS agar supplemented with 5 g/L of CaCO3. Isolated bacterial colonies producing transparent halo were selected as potential lactic acid bacteria (LAB), and tested for their antibacterial activity, phenotypic and biochemical characteristics, acidic yield, and tolerance to acid and bile. Results A total of 90 potential LAB were isolated from cloacal samples collected from 41 free-ranging chickens of indigenous breeds. Of these, 52 LAB isolates (57%) showed variable antibacterial activity to at least one bacterial pathogen. Of 52 LAB, 46 isolates fulfilled phenotypic and biochemical criteria of Lactobacillus spp. Of these, 37 isolates produced varying percentage yields of lactic acid, 27 isolates showed survival at pH 3.0, and 17 isolates showed survival tolerances in the presence of 0.3% and 0.5% bile salts for 24 hours. Phylogenetic analysis of 16S rDNA sequencing of LAB isolates fulfilling in vitro probiotics properties showed that 3 isolates had genetic identity of 99.38% with Lactobacillus plantarum, while one isolate was genetically similar (99.85%) with the clade of L. reuteri, L. antri and L. panis. Conclusion Our study identified four Lactobacillus spp. strains having potential probiotics properties. Further investigations are needed to evaluate these isolates to be used as poultry probiotics feed supplement.
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- 2022
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16. Understanding Mycobacterium tuberculosis complex in elephants through a One Health approach: a systematic review
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Rajesh Man Rajbhandari, José de la Fuente, Dibesh Karmacharya, Sujala Mathema, Bijay Maharjan, Sameer Mani Dixit, Nisha Shrestha, João Queirós, Christian Gortázar, and Paulo Célio Alves
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Transmisión ,General Veterinary ,Loxodonta Africana ,Prevention ,Elephants ,Animals, Wild ,Loxodonta africana ,Mycobacterium tuberculosis ,General Medicine ,Elephas maximus ,Zoonosis ,Prevención ,Transmission ,Animals ,Tuberculosis ,One Health - Abstract
[Background]: Mycobacterium tuberculosis complex (MTC) that causes the chronic infectious disease- tuberculosis (TB), often presents with a complicated epidemiological pattern where the transmission chain may include humans, domestic animals and wildlife, including elephants. TB has been reported globally in both captive and wild elephants. The One Health approach might be the most effective way of understanding the shared MTC infection dynamics in captive and wild animals like Asian elephants. This systematic review accumulates evidence on occurrence, transmission pathways, and preventive measures of TB in elephants from a One Health perspective., [Results]: The prevalence of TB reported in elephant populations ranges from 0 to 23.33% and high prevalence's are reported for elephants that are in close proximity to infected humans. The risk of elephant to human infection transmission increased significantly with exposure duration and contact with infected elephants. Some studies described the plausible TB transmission to captive elephants from other animals (wild and domestic), suggesting inter- and intra-species transmission. The results of this systematic review based on 27 relevant published works, suggest three overarching interrelated transmission pathways for M. tuberculosis infections in Asian elephants- i) humans and elephants, ii) other animals (wild or domestic) and elephants and iii) unclear sources of infection., [Conclusions]: The progress made with new TB diagnostic tools provides multiple methods to choose from. However, lack of harmonization of TB testing in elephants and their human contacts remains a challenge to prevent TB in those animals. Routine TB screening among elephants and caretakers by setting up an occupational health program for early diagnosis of infection through combined efforts of public health, veterinary medicine, and occupational health experts is suggested. This implies the need for a One Health approach to elephant TB control. This review reveals the need for more research on Mycobacterium tuberculosis complex transmission pathways at the human-animal interface.
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- 2022
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17. Differentially Represented Proteins in Response to Infection with
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Margarita, Villar, Rajesh Man, Rajbhandari, Sara, Artigas-Jerónimo, Marinela, Contreras, Amir, Sadaula, Dibesh, Karmacharya, Paulo Célio, Alves, Christian, Gortázar, and José, de la Fuente
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Tuberculosis is a major global concern. Tuberculosis in wildlife is a risk for zoonotic transmission and becoming one of the challenges for conservation globally. In elephants, the number of cases is likely rising. The aim of this study was to identify proteins related to tuberculosis infection in elephants, which could then be used for the development of diagnostic tools and/or vaccines. A serum proteomics approach was used to characterize differentially represented proteins in response to
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- 2022
18. Structure-based in silico design and in vitro acaricidal activity assessment of Acacia nilotica and Psidium guajava extracts against Sarcoptes scabiei var. cuniculi
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Afshan Khan, Muhammad Sohaib, Rooh Ullah, Imdad Hussain, Sadaf Niaz, Nosheen Malak, José de la Fuente, Adil Khan, Liliana Aguilar-Marcelino, Abdullah D. Alanazi, and Mourad Ben Said
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Scabies ,Infectious Diseases ,Psidium ,General Veterinary ,Plant Extracts ,Insect Science ,Acacia ,Animals ,Humans ,Parasitology ,General Medicine ,Sarcoptes scabiei ,Acaricides - Abstract
Infestation by Sarcoptes scabiei var. cuniculi mite causes scabies in humans and mange in animals. Alternative methods for developing environmentally friendly and effective plant-based acaricides are now a priority. The purpose of this research was the in silico design and in vitro evaluation of the efficacy of ethanol extracts of Acacia nilotica and Psidium guajava plant leaves against S. scabiei. Chem-Draw ultra-software (v. 12.0.2.1076.2010) was used to draw 36 distinct compounds from these plants that were employed as ligands in docking tests against S. scabiei Aspartic protease (SsAP). With docking scores of − 6.50993 and − 6.16359, respectively, clionasterol (PubChem CID 457801) and mangiferin (PubChem CID 5281647) from A. nilotica inhibited the targeted protein SsAP, while only beta-sitosterol (PubChem CID 222284) from P. guajava interacted with the SsAP active site with a docking score of − 6.20532. Mortality in contact bioassay at concentrations of 0.25, 0.5, 1.0, and 2.0 g/ml was determined to calculate median lethal time (LT50) and median lethal concentration (LC50) values. Acacia nilotica extract had an LC50 value of 0.218 g/ml compared to P. guajava extract, which had an LC50 value of 0.829 g/ml at 6 h. These results suggest that A. nilotica extract is more effective in killing mites, and these plants may have novel acaricidal properties against S. scabiei. Further research should focus on A. nilotica as a potential substitute for clinically available acaricides against resistant mites.
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- 2022
19. COVID-19 in the Developing World: Is the Immune Response to α-Gal an Overlooked Factor Mitigating the Severity of Infection?
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Alejandro Cabezas-Cruz, José de la Fuente, Adnan Hodžić, Junta de Comunidades de Castilla-La Mancha, Fuente, José de la, Cabezas-Cruz, Alejandro, Institute of Parasitology [Vienna], University of Veterinary Medicine, Vienna, Oklahoma State University [Stillwater], Biologie moléculaire et immunologie parasitaires et fongiques (BIPAR), École nationale vétérinaire d'Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Dozulé, Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Consejería de Educación, Cultura y Deportes, JCCM, Spain,Project CCM17-PIC-036 (SBPLY/17/180501/000185)., Fuente, José de la [0000-0001-7383-9649], Cabezas-Cruz, Alejandro [0000-0002-8660-730X], and École nationale vétérinaire - Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Dozulé
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0301 basic medicine ,Coronavirus disease 2019 (COVID-19) ,[SDV]Life Sciences [q-bio] ,030106 microbiology ,Cross Reactions ,Gut flora ,Severity of Illness Index ,Neutralization ,ABO Blood-Group System ,Mice ,03 medical and health sciences ,Immune system ,Downregulation and upregulation ,Immunity ,Pandemic ,Prevalence ,Animals ,Humans ,Medicine ,Developing Countries ,Pandemics ,biology ,SARS-CoV-2 ,business.industry ,COVID-19 ,biology.organism_classification ,Antibodies, Neutralizing ,Immunity, Innate ,Gastrointestinal Microbiome ,3. Good health ,030104 developmental biology ,Infectious Diseases ,Immunology ,biology.protein ,α-gal syndrome ,Antibody ,business ,Trisaccharides - Abstract
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the causative agent of coronavirus disease 2019 (COVID-19), which has affected millions of people worldwide. Considerably lower prevalence and fatality rates resulting from COVID-19 are reported in Africa and Asia than in the industrialized world. In this Viewpoint, we discuss the possibility that this intriguing phenomenon could be, among other factors, due to protective immunity of the oligosaccharide galactose-α-1,3-galactose (α-Gal). The α-Gal immunity induced by gut microbiota that express the same glycan modification may prevent COVID-19 through the activation of different mechanisms involved in SARS-CoV-2 neutralization and the downregulation of the inflammatory response in the lungs of infected patients., We thank the members of our group for fruitful discussions. The investigation of the anti-α-Gal antibody response in patients with COVID-19 was partially supported by the Consejeria de Educacion, Cultura y Deportes, JCCM, Spain, ́ Project CCM17-PIC-036 (SBPLY/17/180501/000185).
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- 2020
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20. Understanding the role of the first language (L1) in instructed second language acquisition (ISLA): Effects of using a principled approach to L1 in the beginner foreign language classroom
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Carola Goldenberg and María José de la Fuente
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050101 languages & linguistics ,Linguistics and Language ,First language ,05 social sciences ,Foreign language ,050301 education ,Second-language acquisition ,Language and Linguistics ,Linguistics ,Education ,Second language ,0501 psychology and cognitive sciences ,Psychology ,0503 education - Abstract
This study investigated whether second language (L2) classroom instruction that incorporates a principled approach into the use of the first language (L1) by students and instructors has an effect on beginning learners’ development of L2 speaking and writing proficiency, compared to L2-only instruction, over the course of one semester. Participants were 54 students of Spanish enrolled in six sections of a university-level Elementary Spanish course. The six intact classes, exposed to the same task-based curriculum, were randomly assigned to two experimental groups (–L1 and +L1). For the –L1 group, instruction and interaction were conducted exclusively in the L2, whereas instruction and interaction in the +L1 group included specific uses of the L1. A pretest–posttest design was used to measure change in speaking and writing proficiency. Effects were assessed using the STAMP 4 test, a standardized measure of proficiency. Results indicated that courses under both conditions promoted improvements in speaking and writing. However, students in the +L1 condition improved significantly more than those in the control –L1 group, both in speaking and writing. This points to a potentially more important role for the L1 in the development of an L2. Pedagogical implications are discussed, and directions for further research are offered.
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- 2020
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21. Assessment of the Safety and Efficacy of an Oral Probiotic-Based Vaccine Against Aspergillus Infection in Captive-Bred Humboldt Penguins (
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Milan, Thorel, Lourdes, Mateos-Hernandez, Baptiste, Mulot, Mouna Naila, Azzouni, Adnan, Hodžić, Hugues, Gaillot, Yannick, Ruel, Guillaume, Desoubeaux, Jean-Baptiste, Delaye, Dasiel, Obregon, Alejandra, Wu-Chuang, José, de la Fuente, Luis G, Bermúdez-Humarán, Veronica, Risco-Castillo, Antoine, Leclerc, and Alejandro, Cabezas-Cruz
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Vaccines ,Immunoglobulin M ,Probiotics ,Escherichia coli ,Animals ,Aspergillosis ,Galactose ,Spheniscidae - Abstract
Aspergillosis is a fungal infection caused mainly by
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- 2022
22. Changes in resistome profile of potential probiotic Lactiplantibacillus pentosus in response to edible oil adaptation
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Esther Alonso García, Nabil Benomar, Leyre Lavilla Lerma, Juan José de la Fuente Ordoñez, Charles W. Knapp, and Hikmate Abriouel
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TA ,Probiotics ,Olea ,Fermentation ,Food Microbiology ,Lactobacillus pentosus ,Microbiology ,Oils ,Food Science ,Anti-Bacterial Agents - Abstract
Despite increasing interest to investigate horizontal gene transfer as a leading cause of antibiotic resistance spread, the resistome is not only influenced by the influx and efflux of genes in different environments. Rather, the expression of existing genes under different stress conditions requires special attention. This study determined whether pre-adapting Lactiplantibacillus pentosus strains, isolated from Aloreña green table olives, to vegetable-based edible oils influence their phenotypic and genotypic responses to antibiotics. This has significant diet, food matrix, gut health, and food safety concerns. Pre-adapting L. pentosus strains to oils significantly changed their susceptibility profile to antibiotics. However, results generally differed among the three strains; although changes in the Minimum Inhibitory Concentration (MIC) of antibiotics occurred, it depended on the L. pentosus strain and the oil used for adaptation. The pre-adaptation of L. pentosus strains with olive, sunflower, argan and linseed oils induced gene expressions (e.g., rpsL, recA and uvrB) in several stress responses. Thus, to analyze this fact in-depth, transcriptional changes were reported in the selected potential probiotic L. pentosus CF2-10 adapted with olive or sunflower, rerouting its metabolic pathways to export toxic molecules through efflux pumps and ABC transporters. Pre-adaptation of some lactobacilli with olive or sunflower oils may represent a novel approach for manufacturing probiotic products with improved stability, functionality and robustness.
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- 2022
23. Microbial Electrochemical Technologies for Sustainable Nitrogen Removal in Marine and Coastal Environments
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María José De La Fuente, Carlos Gallardo-Bustos, Rodrigo De la Iglesia, and Ignacio T. Vargas
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Bioreactors ,Nitrogen ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Denitrification ,Wastewater ,Ecosystem - Abstract
For many years, the world’s coastal marine ecosystems have received industrial waste with high nitrogen concentrations, generating the eutrophication of these ecosystems. Different physicochemical-biological technologies have been developed to remove the nitrogen present in wastewater. However, conventional technologies have high operating costs and excessive production of brines or sludge which compromise the sustainability of the treatment. Microbial electrochemical technologies (METs) have begun to gain attention due to their cost-efficiency in removing nitrogen and organic matter using the metabolic capacity of microorganisms. This article combines a critical review of the environmental problems associated with the discharge of the excess nitrogen and the biological processes involved in its biogeochemical cycle; with a comparative analysis of conventional treatment technologies and METs especially designed for nitrogen removal. Finally, current METs limitations and perspectives as a sustainable nitrogen treatment alternative and efficient microbial enrichment techniques are included.
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- 2022
24. Immunostimulation with Heat-Inactivated Mycobacterium Bovis Reduces Parasite Burden in Mice Challenged with Plasmodium Berghei
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Elisa Ferreras-Colino, José de la Fuente, Joana Couto, Sandra Antunes, Iker A. Sevilla, Ana Domingos, Marinela Contreras, Christian Gortazar, and María A. Risalde
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History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
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25. Assessment of the safety and efficacy of an oral probiotic-based vaccine against Aspergillus infection in captive-bred humboldt penguins (Spheniscus humboldti)
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Milan Thorel, Lourdes Mateos-Hernandez, Baptiste Mulot, Mouna Naila Azzouni, Adnan Hodžić, Hugues Gaillot, Yannick Ruel, Guillaume Desoubeaux, Jean-Baptiste Delaye, Dasiel Obregon, Alejandra Wu-Chuang, José de la Fuente, Luis G. Bermúdez-Humarán, Veronica Risco-Castillo, Antoine Leclerc, Alejandro Cabezas-Cruz, Agence Nationale de la Recherche (France), and Programa Nacional de Becas de Postgrado en el Exterior 'Don Carlos Antonio López' (Paraguay)
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a-Gal Vaccine ,α-Gal vaccine ,E. coli Nissle 1917 ,Zoo ,Aspergillus fumigatus ,Probiotics ,Spheniscus humboldti ,Immunology ,Immunology and Allergy ,Aspergillosis ,Penguins - Abstract
Aspergillosis is a fungal infection caused mainly by Aspergillus fumigatus that often results in respiratory disease in birds. Aspergillosis is a major cause of morbidity and mortality in captive-bred penguin species. Currently, there is no registered vaccine to prevent aspergillosis. Recent research demonstrated that oral administration of gram-negative bacteria expressing high levels of galactose-α-1,3-galactose (α-Gal) modulates anti-α-Gal immunity and protects turkeys from clinical aspergillosis caused by experimental A. fumigatus infection. The role of anti-α-Gal immunity in penguins has not been studied. Here, we tested the distribution of α-1,3-galactosyltransferase (α1,3GT) genes in the fecal microbiome of Humboldt penguins (Spheniscus humboldti). The occurrence of natural anti-α-Gal antibodies (Abs) in sera and eggs of healthy Humboldt penguins was also assessed. A trial was then conducted to test whether oral administration of Escherichia coli Nissle, expressing high α-Gal levels, modulates anti-α-Gal immunity in a colony of Humboldt penguins. Animals in the vaccination and placebo groups were evaluated before the trial and followed for one year for aspergillosis detection using a diagnostic panel including computed tomography scans, capillary zone electrophoresis, 3-hydroxybutyrate levels, and anti-A. fumigatus Abs. Anti-α-Gal Abs were detected in sera (IgM and IgY) and eggs (IgY) of healthy penguins. Microbiota analysis and functional predictions revealed the presence of α1,3GT genes in the microbiota of Humboldt penguins and other penguin species. A strong decrease in anti-α-Gal IgM levels was observed in all animals in the placebo group three months after vaccination protocol. This decrease was not observed in E. coli Nissle-treated penguins. After the vaccination protocol, we found a positive correlation between anti-E. coli IgY and anti-α-Gal IgY in the E. coli Nissle group, suggesting a correlation between the presence of the bacteria and these Abs. During the study period, three penguins exhibited respiratory signs consistent with aspergillosis. Two were from the placebo group whose symptoms resolved with specific treatments, while a single vaccinated individual developed fatal respiratory aspergillosis eight months after the trial. We conclude that E. coli Nissle represents a safe potential probiotic with a protective effect against aspergillosis in Humboldt penguins that deserves to be further explored for therapeutic uses in these animals., UMR BIPAR is supported by the French Government’s Investissement d’Avenir program, Laboratoire d’Excellence “Integrative Biology of Emerging Infectious Diseases” (grant no. ANR-10-LABX-62-IBEID). AW-C is supported by Programa Nacional de Becas de Postgrado en el Exterior “Don Carlos Antonio López” (grant no. 205/2018).
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- 2022
26. Correlates with Vaccine Protective Capacity and COVID-19 Disease Symptoms Identified by Serum Proteomics in Vaccinated Individuals
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Margarita Villar, José Miguel Urra, Sara Artigas-Jerónimo, Lorena Mazuecos, Marinela Contreras, Rita Vaz-Rodrigues, Francisco J. Rodríguez-del-Río, Christian Gortázar, José de la Fuente, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), European Commission, Junta de Comunidades de Castilla-La Mancha, Villar, Margarita [0000-0003-4172-9079], Mazuecos, Lorena [0000-0002-7897-1304], Contreras, Marinela [0000-0002-1505-5624], Vaz Rodrigues, Rita [0000-0002-0411-7738], Fuente, José de la [0000-0001-7383-9649], Villar, Margarita, Mazuecos, Lorena, Contreras, Marinela, Vaz Rodrigues, Rita, and Fuente, José de la
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Proteomics ,Immunology ,Inmunología ,Pharmaceutical Science ,Analytical Chemistry ,Epitopes ,COVID-19 ,proteomic ,vaccine ,immunology ,biomarker ,Drug Discovery ,Hypersensitivity ,Humans ,Physical and Theoretical Chemistry ,Autoantibodies ,Vacuna ,SARS-CoV-2 ,Organic Chemistry ,Proteomic ,Viral Vaccines ,Biomarker ,Proteómica ,Chemistry (miscellaneous) ,Spike Glycoprotein, Coronavirus ,Biomarcador ,Molecular Medicine ,Vaccine ,Biomarkers - Abstract
This article belongs to the Special Issue Potential Anti-SARS-CoV-2 Molecular Strategies., In the last two years, the coronavirus disease 19 (COVID-19) pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been a scientific and social challenge worldwide. Vaccines have been the most effective intervention for reducing virus transmission and disease severity. However, genetic virus variants are still circulating among vaccinated individuals with different disease symptomatology. Understanding the protective- or disease-associated mechanisms in vaccinated individuals is relevant to advances in vaccine development and implementation. To address this objective, serum-protein profiles were characterized by quantitative proteomics and data-analysis algorithms in four cohorts of uninfected and SARS-CoV-2-infected vaccinated individuals with asymptomatic, non-severe, and severe disease symptomatology. The results show that immunoglobulins were the most overrepresented proteins in infected cohorts when compared to PCR-negative individuals. The immunoglobulin profile varied between different infected cohorts and correlated with protective- or disease-associated capacity. Overrepresented immunoglobulins in PCR-positive individuals correlated with protective response against SARS-CoV-2, other viruses, and thrombosis in asymptomatic cases. In non-severe cases, correlates of protection against SARS-CoV-2 and HBV together with risk of myasthenia gravis and allergy and autoantibodies were observed. Patients with severe symptoms presented risk for allergy, chronic idiopathic thrombocytopenic purpura, and autoantibodies. The analysis of underrepresented immunoglobulins in PCR-positive compared to PCR-negative individuals identified vaccine-induced protective epitopes in various coronavirus proteins, including the spike receptor-binding domain RBD. Non-immunoglobulin proteins were associated with COVID-19 symptoms and biological processes. These results evidence host-associated differences in response to vaccination and the possibility of improving vaccine efficacy against SARS-CoV-2., This research was funded by the Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación MCIN/AEI/10.13039/501100011033, Spain, and EU-FEDER (Grant BIOGAL PID2020-116761GB-I00); and the Junta de Comunidades de vncha (JCCM), Spain, and EU-FEDER (grant MYCOTRAINING SBPLY/19/180501/000174).
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- 2022
27. Characterization of tick salivary gland and saliva alphagalactome reveals candidate alpha-gal syndrome disease biomarkers
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Margarita Villar, Iván Pacheco, Lourdes Mateos-Hernández, Alejandro Cabezas-Cruz, Ala E. Tabor, Manuel Rodríguez-Valle, Albert Mulenga, Katherine M. Kocan, Edmour F. Blouin, José de La Fuente, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), European Commission, Consejo Superior de Investigaciones Científicas (España), Junta de Comunidades de Castilla-La Mancha, Australian Research Council, and Universidad de Castilla La Mancha
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Ticks ,Animals ,Humans ,Saliva ,Molecular Biology ,Biochemistry ,Biomarkers ,Food Hypersensitivity ,Salivary Glands - Abstract
[Background]: Ticks are obligate hematophagous arthropods that synthesize the glycan Galα1-3Galβ1-(3)4GlcNAc-R (α-Gal) associated with the alpha-gal syndrome (AGS) or allergy to mammalian meat consumption., [Research design and methods]: In this study, we used a proteomics approach to characterize tick proteins in salivary glands (sialome SG), secreted saliva (sialome SA) and with α-Gal modification (alphagalactome SG and SA) in model tick species associated with the AGS in the United States (Amblyomma americanum) and Australia (Ixodes holocyclus). Selected proteins reactive to sera (IgE) from patients with AGS were identified to advance in the identification of possible proteins associated with the AGS. For comparative analysis, the α-Gal content was measured in various tick species., [Results]: The results confirmed that ticks produce proteins with α-Gal modifications and secreted into saliva during feeding. Proteins identified in tick alphagalactome SA by sera from patients with severe AGS symptomatology may constitute candidate disease biomarkers., [Conclusions]: The results support the presence of tick-derived proteins with α-Gal modifications in the saliva with potential implications in AGS and other disorders and protective capacity against tick infestations and pathogen infection. Future research should focus on the characterization of the function of tick glycoproteins with α-Gal in tick biology and AGS., This work was supported by the State Research Agency, Spain, project BIOGAL [PID2020-116761GB-I00], the Spanish Research Council Grant [2020AEP123] and Consejería de Educación, Cultura y Deportes, JCCM, Spain, project CCM17-PIC-036 (SBPLY/17/180501/000185). Ixodes holocyclus saliva and salivary gland collections was supported by the Australian Research Council Linkage Grant [LP120200836 (2013-2018)]. MV was supported by the University of Castilla La Mancha, UCLM, Spain, and the Fondo Europeo de Desarrollo Regional, FEDER, EU.
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- 2021
28. Introducción al ecomunitarismo y a la educación ambiental. Una lectura chilena de la obra de Sirio López Velasco
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José de la Fuente and Ricardo Salas
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La tendencia plural ecomunitarista, indispensable guía para un nuevo sentido histórico, comparte la definición de democracia de A. Lincoln: “gobierno del pueblo, por el pueblo y para el pueblo”, donde las vivencias interculturales constituyan el terreno fértil para intercambiar el Buen Vivir, regulada por una Educación Ambiental como proceso de concientización compuesto por el “develamiento crítico de las opresiones y devastaciones que vivimos-presenciamos y la acción transformadora-superadora de las mismas”. En efecto, una de las finalidades es transformar la sociedad en sentido ecomunitarista en todos los niveles, desde el local al planetario, preparando el cambio cualitativo que abrirá las puertas de la transición a gran escala para reemplazar el capitalismo por una convivencia digna, decente, valórica, estética, ética, práctica, científica y participada. Esta educación excluye al machismo y la homofobia, e incluye el respeto a la salud y la educación sexual desde la pubertad hasta la edad adulta.
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- 2021
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29. A Quantum Vaccinomics Approach Based on Protein-Protein Interactions
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Marinela, Contreras, Sara, Artigas-Jerónimo, Juan J, Pastor Comín, and José, de la Fuente
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Epitopes ,Vaccines ,Ticks ,Tick-Borne Diseases ,Animals ,Humans ,Protein Interaction Maps ,Antigens ,Tick Infestations - Abstract
Vaccines are the most effective preventive intervention to reduce the impact of infectious diseases worldwide. In particular, tick-borne diseases represent a growing burden for human and animal health worldwide and vaccines are the most effective and environmentally sound approach for the control of vector infestations and pathogen transmission. However, the development of effective vaccines for the control of tick-borne diseases with combined vector-derived and pathogen-derived antigens is one of the limitations for the development of effective vaccine formulations. Quantum biology arise from findings suggesting that living cells operate under non-trivial features of quantum mechanics, which has been proposed to be involved in DNA mutation biological process. Then, the electronic structure of the molecular interactions behind peptide immunogenicity led to quantum immunology and based on the definition of the photon as a quantum of light, the immune protective epitopes were proposed as the immunological quantum. Recently, a quantum vaccinomics approach was proposed based on the characterization of the immunological quantum to further advance the design of more effective and safe vaccines. In this chapter, we describe methods of the quantum vaccinomics approach based on proteins with key functions in cell interactome and regulome of vector-host-pathogen interactions for the identification by yeast two-hybrid screen and the characterization by in vitro protein-protein interactions and musical scores of protein interacting domains, and the characterization of conserved protective epitopes in protein interacting domains. These results can then be used for the design and production of chimeric protective antigens.
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- 2021
30. Evolution of Tick Vaccinology Highlights Changes in Paradigms in This Research Area
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José De la Fuente and Agustín Estrada Peña
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Pharmacology ,Infectious Diseases ,Drug Discovery ,Immunology ,Pharmacology (medical) - Abstract
Ticks and tick-borne diseases affect human and animal health worldwide. Although some tick-protective antigens have been identified and characterized, further research is needed for the development and application of effective anti-tick vaccines, which currently are unavailable for human protection. To study the trends and gaps in anti-tick vaccine approaches, herein we used scientometric analysis to evaluate several aspects of tick vaccinology. Co-authorship and citations networks pointed out two main research fronts, one focused on the laboratory protocols driving the recognition of candidate antigens and the other devoted to field experiments of protection against ticks. The analysis demonstrated the prominence of research in European countries on the topic. The scientometric approach allowed the recognition of isolated teams working casually on the topic, the lack of cooperation between middle- and low-income countries, and the need for sustained and integrated research. Most important, we identified a considerable lack of new candidates for vaccine development, as well as the participation of African and Asian countries. These results provide significant insights obtained from bibliographical analysis, suggest the strength and weaknesses in this field of research, and highlight new directions to advance in the development of effective vaccines for the control of tick infestations and tick-borne pathogens.
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- 2023
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31. Ticks Infesting Dogs in Khyber Pakhtunkhwa, Pakistan: Detailed Epidemiological and Molecular Report
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Jehan Zeb, Baolin Song, Haytham Senbill, Muhammad Umair Aziz, Sabir Hussain, Munsif Ali Khan, Ishtiaq Qadri, Alejandro Cabezas-Cruz, José de la Fuente, and Olivier Andre Sparagano
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Microbiology (medical) ,Infectious Diseases ,General Immunology and Microbiology ,Hyalomma excavatum ,Rhipicephalus sanguineus s.l ,Rhipicephalus turanicus s.s ,cox1 ,16S rRNA ,ticks ,dogs ,Khyber Pakhtunkhwa ,Pakistan ,Immunology and Allergy ,Molecular Biology - Abstract
Ticks and tick-borne diseases are considered a major challenge for human and animal health in tropical, sub-tropical, and temperate regions of the world. However, only scarce information is available on the characterization of tick species infesting dogs in Pakistan. In this study, we present a comprehensive report on the epidemiological and phylogenetic aspects of ticks infesting dogs in Pakistan using the mitochondrial markers i.e. Cytochrome c oxidase subunit 1 (cox1) and 16S ribosomal RNA (16S rRNA) nucleotide sequences. A total of 300 dogs were examined and 1150 ixodid ticks were collected across central Khyber Pakhtunkhwa, Pakistan. The morpho-molecular characterization of hard ticks revealed the presence of two ixodid tick genera on dogs, i.e., Hyalomma and Rhipicephalus, including six tick species viz. Hyalomma dromedarii (15.9%), Hyalomma excavatum (3%), Rhipicephalus sanguineus s.l. (41.3%), Rhipicephalus turanicus s.s. (28.7%), Rhipicephalus haemaphysaloides (10.2%), and Rhipicephalus microplus (2%). The total prevalence of tick infestation in dogs was 61%. The district with the highest tick prevalence rate in dogs was Mardan (14.7%), followed by Peshawar (13%), Swabi (12%), Charsadda (11%), and Malakand (10.3%), respectively. Risk factors analysis indicated that some demographic and host management-associated factors such as host age, breed, exposure to acaricides treatment, and previous tick infestation history were associated with a higher risk of tick infestation on dogs. This is the first molecular report confirming the infestation of Hyalomma and Rhipicephalus tick species in the dog population from the study area. The present study also reported a new tick–host association between Hy. excavatum, Hy. dromedarii, and dogs. Phylogenetic analysis revealed that cox1 partial nucleotide sequences of Hy. excavatum in our dataset were 100% identical to similar tick specimens identified in Turkey, and those of Hy. dromedarii were identical to tick specimens from Iran. Whereas, Rh. haemaphysaloides and Rh. microplus’cox1 partial nucleotide sequences were identical to sequences previously published from Pakistan. Rhipicephalus turanicus s.s. ‘s cox1 isolates from the present study were 99.8–100% identical to Pakistani-reported isolates, and those of Rh. sanguineus s.l. were 100% identical to Chinese specimens. Results on the genetic characterization of ticks were further confirmed by 16S rRNA partial nucleotide sequences analysis, which revealed 100% identity between the tick isolates of this study and those of Hy. excavatum reported from Turkey; Hy. dromedarii specimens reported from Senegal; Rh. haemaphysaloides, Rh. microplus, and Rh. turanicus s.s., previously published from Pakistan, and Rh. sanguineuss.l., published from China. Furthermore, phylogenetic analysis showed that the Rh. sanguineus s.l. isolates of this study clustered with specimens of the tropical lineage with 7.7–10% nucleotide divergence from the specimens of the temperate lineage. Further molecular works need to be performed throughout Pakistan to present a more detailed map of tick distribution with information about dog host associations, biological characteristics, and pathogen competence.
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- 2023
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32. Inspiring Anti-Tick Vaccine Research, Development and Deployment in Tropical Africa for the Control of Cattle Ticks: Review and Insights
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Paul D. Kasaija, Marinela Contreras, Halid Kirunda, Ann Nanteza, Fredrick Kabi, Swidiq Mugerwa, and José de la Fuente
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Pharmacology ,Infectious Diseases ,Drug Discovery ,Immunology ,Pharmacology (medical) - Abstract
Ticks are worldwide ectoparasites to humans and animals, and are associated with numerous health and economic effects. Threatening over 80% of the global cattle population, tick and tick-borne diseases (TTBDs) particularly constrain livestock production in the East, Central and Southern Africa. This, therefore, makes their control critical to the sustainability of the animal industry in the region. Since ticks are developing resistance against acaricides, anti-tick vaccines (ATVs) have been proposed as an environmentally friendly control alternative. Whereas they have been used in Latin America and Australia to reduce tick populations, pathogenic infections and number of acaricide treatments, commercially registered ATVs have not been adopted in tropical Africa for tick control. This is majorly due to their limited protection against economically important tick species of Africa and lack of research. Recent advances in various omics technologies and reverse vaccinology have enabled the identification of many candidate anti-tick antigens (ATAs), and are likely to usher in the next generation of vaccines, for which Africa should prepare to embrace. Herein, we highlight some scientific principles and approaches that have been used to identify ATAs, outline characteristics of a desirable ATA for vaccine design and propose the need for African governments to investment in ATV research to develop vaccines relevant to local tick species (personalized vaccines). We have also discussed the prospect of incorporating anti-tick vaccines into the integrated TTBDs control strategies in the sub-Saharan Africa, citing the case of Uganda.
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- 2022
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33. Enhanced nitrogen and carbon removal in natural seawater by electrochemical enrichment in a bioelectrochemical reactor
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María José De La Fuente, Rodrigo De la Iglesia, Laura Farias, Benjamin Glasner, Felipe Torres-Rojas, Diana Muñoz, Holger Daims, Michael Lukumbuzya, and Ignacio T. Vargas
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Nitrates ,Environmental Engineering ,Nitrogen ,General Medicine ,Wastewater ,Management, Monitoring, Policy and Law ,Nitrification ,Carbon ,Bioreactors ,RNA, Ribosomal, 16S ,Ammonium Compounds ,Denitrification ,Graphite ,Seawater ,Waste Management and Disposal ,Nitrites ,In Situ Hybridization, Fluorescence - Abstract
Municipal and industrial wastewater discharges in coastal and marine environments are of major concern due to their high carbon and nitrogen loads and the resulted phenomenon of eutrophication. Bioelectrochemical reactors (BERs) for simultaneous nitrogen and carbon removal have gained attention owing to their cost efficiency and versatility, as well as the possibility of electrochemical enrich specific groups. This study presented a scalable two-chamber BERs using graphite granules as electrode material. BERs were inoculated and operated for 37 days using natural seawater with high concentrations of ammonium and acetate. The BERs demonstrated a maximum current density of 0.9 A m
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- 2022
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34. Approaching Challenges Posed by SARS-CoV-2 Genetic Variants
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José De la Fuente
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Microbiology (medical) ,Infectious Diseases ,General Immunology and Microbiology ,Immunology and Allergy ,Molecular Biology - Abstract
In this new collection of the most viewed and cited papers, one of the Editor’s chosen articles, published in Pathogens in 2021, addressed the impact and the concerns relating to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its variants [...]
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- 2022
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35. The Saharan antelope addax (Addax nasomaculatus) as a host for Hyalomma marginatum, tick vector of Crimean-Congo hemorrhagic fever virus
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Oscar Rodríguez, Gabriela de la Fuente, Isabel G. Fernández de Mera, Rita Vaz-Rodrigues, Christian Gortázar, and José de la Fuente
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Infectious Diseases ,Insect Science ,Parasitology ,Microbiology - Abstract
Tick infestation and pathogen prevalence in ticks infesting the Saharan antelope addax (Addax nasomaculatus) are factors that may constitute a risk for both human and animal health. In this study we describe season distribution of adult Hyalomma marginatum and analyzed the tick-borne pathogens and their seroprevalence in natural-living addax in Morocco. The results showed that addax is an important host species for H. marginatum adults. The seroprevalence of Bluetongue virus (BTV; 61.5–92.3%, n = 8/13-84/91), Coxiella burnetii (36.3–69.2%, n = 33/91-9/13) and Brucella spp. (0.0–4.8%, n = 0/50-2/42) was characterized in addax during various years (sampled animals per year, n = 13–91). Presence of Aigai virus (AIGV), a recent taxonomic differentiation of Crimean-Congo hemorrhagic fever virus (CCHFV) of 100% (4/4, years 2016 and 2017) together with Babesia ovis (75%, 3/4, year 2014), Anaplasma spp. (75%, 3/4, year 2014), Rickettsia spp. (50%, 2/4, year 2014) and Theileria spp. (25%, 1/4, year 2014) was observed in H. marginatum collected from the addax (4 pools of 10 adult ticks each). The results support the role of addax host in H. marginatum life cycle and exposure to AIGV and other tick-borne pathogens. The development of control interventions including anti-tick vaccines for wildlife species will contribute to the implementation of effective measures for the prevention and control of tick-borne diseases and might be relevant for the preservation of this threatened species and others such as Arabian oryx (Oryx leucoryx) and African elk (Taurotragus oryx) that share habitat.
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- 2022
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36. The α-Gal Syndrome and Potential Mechanisms
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Patricia, Román-Carrasco, Wolfgang, Hemmer, Alejandro, Cabezas-Cruz, Adnan, Hodžić, José, de la Fuente, and Ines, Swoboda
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The α-Gal syndrome is a complex allergic disease characterized by the development of specific IgE antibodies against the carbohydrate galactose-α-1,3-galactose (α-Gal), an oligosaccharide present in cells and tissues of non-primate mammals. Individuals with IgE antibodies to α-Gal suffer from a delayed form of anaphylaxis following red meat consumption. There are several features that make the α-Gal syndrome such a unique allergic disease and distinguish it from other food allergies: (1) symptoms causing IgE antibodies are directed against a carbohydrate moiety, (2) the unusual delay between the consumption of the food and the onset of the symptoms, and (3) the fact that primary sensitization to α-Gal occurs
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- 2021
37. Transcriptomic Profile and Probiotic Properties of
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Esther, Alonso García, Juan José, de la Fuente Ordoñez, Leyre, Lavilla Lerma, María D, Estudillo-Martínez, Sonia, Castillo-Gutiérrez, Nabil, Benomar, Charles W, Knapp, and Hikmate, Abriouel
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transcriptomics ,probiotics ,food and beverages ,vegetable edible oils ,metabolic pathways ,Lactiplantibacillus pentosus ,Microbiology ,Original Research - Abstract
In this study, we determined whether pre-adapting Lactiplantibacillus pentosus strains, isolated from Aloreña green table olives, to vegetable-based edible oils improved their robustness and functionality; this may have great importance on their stress response during fermentation, storage, and digestion. Pre-adapting the strains to the corresponding oils significantly increased their probiotic functionality (e.g., auto-aggregation, co-aggregation with pathogens, and mucin adhesion), although results depended on the strain and the oil used for pre-adaptation. As such, we selected olive-adapted (TO) L. pentosus AP2-16, which exhibited improved functionality, and subjected it to transcriptomic profiling with the aim to understand the molecular mechanisms involved in the adaptation and the increased functionality. Global transcriptomic analysis of oil-adapted (olive or almond) and non-adapted (control) L. pentosus AP2-16 realized that 3,259 genes were expressed, with 2,779 mapped to the reference database. Comparative transcriptomic analysis showed that 125 genes (olive vs. control) and 108 genes (olive vs. almond) became significantly differentially expressed. TO L. pentosus AP2-16 responded by rerouting its metabolic pathways to balance energy production and storage, cell growth and survivability, host interactions (glycoconjugates), and other physiological features. As such, the pre-adaptation of lactobacilli with olive oil switches their transcriptional network to regulate robustness and functionality, possibly representing a novel approach toward the design and manufacture of probiotic products with improved stability and functionality.
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- 2021
38. Challenges at the host-arthropod-coronavirus interface and COVID-19: a One Health approach
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Isabel G. Fernández de Mera, Christian Gortázar, and José de la Fuente
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Epidemiology ,viruses ,Arthropod ,Biology ,medicine.disease_cause ,General Biochemistry, Genetics and Molecular Biology ,Virus ,Host-Parasite Interactions ,Zoonoses ,Pandemic ,medicine ,Animals ,Humans ,Immune response ,Coronavirus ,General Immunology and Microbiology ,Transmission (medicine) ,SARS-CoV-2 ,Host ,Vaccination ,Arthropod Vectors ,COVID-19 ,biochemical phenomena, metabolism, and nutrition ,Vaccine efficacy ,Virology ,One Health ,Virus variants ,Arthropod Vector - Abstract
[Background]: The world faces the challenge posed by the interaction between hosts and Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) with potential role for arthropod vectors, and the effect of SARS-CoV-2 variants on acquired immunity, vaccine efficacy and coronavirus disease-19 (COVID-19) pandemic control. [Proposal]: The characterization of the role played by animal hosts and host-virus interactions is essential to address this challenge. Zoonotic (animal-to-human) and reverse zoonotic (human-to-animal) routes may be involved in virus transmission with a possible still unconfirmed role for arthropod vectors. Herein we propose to consider the risks posed by the possible role of arthropod vectors in COVID-19 and that immunity against SARS-CoV-2 may increase the risk for zoonotic virus transmission. These risks should be considered when evaluating vaccine efficacy and monitoring animal SARS-CoV-2 variants. [Conclusion]: Virus surveillance, epidemiology, sequencing and evaluation of susceptibility to antibodies and other protective immune mechanisms from vaccinated individuals should be improved. A One Health approach such as the one applied by our group SaBio is necessary for a more effective control of COVID-19 and prevention of future pandemics., We thank members of SaBio and collaborators worldwide for their contributions to COVID-19 research and acknowledge the University of Castilla La Mancha (UCLM, Spain) for support to Group SaBio.
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- 2021
39. Arthropod Ectoparasites Have Potential to Bind SARS-CoV-2 via ACE
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José de la Fuente, Su Datt Lam, Christian Gortázar, Paul Ashford, Sandra Díaz-Sánchez, Christine A. Orengo, Margarita Villar, Ministry of Higher Education (Malaysia), Wellcome Trust, Junta de Comunidades de Castilla-La Mancha, European Commission, Lam, Su Datt [0000-0003-4772-7656], Ashford, Paul [0000-0003-4079-0257], Villar, Margarita [0000-0003-4172-9079], Fuente, José de la [0000-0001-7383-9649], Lam, Su Datt, Ashford, Paul, Villar, Margarita, and Fuente, José de la
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0301 basic medicine ,Models, Molecular ,In silico ,Cat flea ,030106 microbiology ,ACE2 ,Sequence Homology ,Ectoparasitic Infestations ,Tick ,Spike protein ,Peptidyl-Dipeptidase A ,spike protein ,Microbiology ,Article ,Virus ,Arthropod Proteins ,03 medical and health sciences ,Phylogenetics ,Virology ,Animals ,Humans ,Bioinformática estructural ,Proteína de espiga ,Arthropods ,Phylogeny ,Genetics ,Binding Sites ,biology ,SARS-CoV-2 ,COVID-19 ,structural bioinformatics ,biology.organism_classification ,Body louse ,QR1-502 ,Parasite ,030104 developmental biology ,Infectious Diseases ,Structural bioinformatics ,Parásito ,parasite ,Mutation ,Spike Glycoprotein, Coronavirus ,Arthropod ,Angiotensin-Converting Enzyme 2 ,Protein Binding - Abstract
Coronavirus-like organisms have been previously identified in Arthropod ectoparasites (such as ticks and unfed cat flea). Yet, the question regarding the possible role of these arthropods as SARS-CoV-2 passive/biological transmission vectors is still poorly explored. In this study, we performed in silico structural and binding energy calculations to assess the risks associated with possible ectoparasite transmission. We found sufficient similarity between ectoparasite ACE and human ACE2 protein sequences to build good quality 3D-models of the SARS-CoV-2 Spike:ACE complex to assess the impacts of ectoparasite mutations on complex stability. For several species (e.g., water flea, deer tick, body louse), our analyses showed no significant destabilisation of the SARS-CoV-2 Spike:ACE complex, suggesting these species would bind the viral Spike protein. Our structural analyses also provide structural rationale for interactions between the viral Spike and the ectoparasite ACE proteins. Although we do not have experimental evidence of infection in these ectoparasites, the predicted stability of the complex suggests this is possible, raising concerns of a possible role in passive transmission of the virus to their human hosts, S.D.L. is funded by a Fundamental Research Grant Scheme from the Ministry of Higher Education Malaysia [FRGS/1/2020/STG01/UKM/02/3]. P.A. is funded by the Wellcome Trust [Wellcome Trust 221327/Z/20/Z]. S.D.-S. is funded by Junta de Comunidades de Castilla-La Mancha (JCCM), Spain and EU-FEDER (grant GALINFEC SBPLY/17/180501/000185). The APC was funded by the Wellcome Trust.
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- 2021
40. Cattle ticks and tick-borne diseases: a review of Uganda's situation
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Paul D. Kasaija, Agustín Estrada-Peña, Halid Kirunda, Marinela Contreras, José de la Fuente, National Agricultural Research Foundation, Agencia Estatal de Investigación (España), and Ministerio de Ciencia, Innovación y Universidades (España)
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Protozoan Vaccines ,Anaplasmosis ,Theileria parva ,Antibodies, Protozoan ,Cattle Diseases ,Tick ,Microbiology ,Seroepidemiologic Studies ,Babesiosis ,parasitic diseases ,Control ,Rhipicephalus ,medicine ,Animals ,East Coast fever ,Tick Control ,Uganda ,Socioeconomics ,Acaricides ,Tick-borne disease ,Farmers ,Surveillance ,biology ,business.industry ,Acaricide ,medicine.disease ,biology.organism_classification ,Theileriasis ,Tick Infestations ,Infectious Diseases ,Tick-Borne Diseases ,Health ,Insect Science ,Parasitology ,Livestock ,Cattle ,business ,Vaccine - Abstract
Herein we review the epidemiology of ticks and tick-borne diseases (TTBDs), their impact on livestock health and on the economy, control and associated challenges in Uganda. Ticks are leading vectors of economically important pathogens and are widespread in Uganda due to suitable climatic conditions. Besides the physical injury inflicted on the animal host, ticks transmit a number of pathogens that can cause morbidity and mortality of livestock if untreated, resulting in economic losses. Uganda suffers an aggregated annual loss (direct and indirect) of over USD 1.1 billion in the TTBDs complex. East Coast fever (ECF) caused by a protozoan haemoparasite, Theileria parva, is the most prevalent and economically important tick-borne disease (TBD) in Uganda and its vector, the brown ear tick (Rhipicephalus appendiculatus) widely distributed. Other prevalent TBDs in Uganda include anaplasmosis, babesiosis and heartwater. We highlight the role of agro-ecological zones (AEZs) and livestock management system in the distribution of TTBDs, citing warm and humid lowlands as being ideal habitats for ticks and endemic for TBDs. Control of TTBDs is a matter of great importance as far as animal health is concerned in Uganda. Indigenous cattle, which make up over 90% of the national herd are known to be more tolerant to TTBDs and most farms rely on endemic stability to TBDs for control. However, exotic cattle breeds are more capital intensive than indigenous breeds, but the increasing adoption of tick-susceptible exotic cattle breeds (especially dairy) in western and central Uganda demands intensive use of acaricides for tick control and prevention of TBDs. Such acaricide pressure has unfortunately led to selection of acaricide-resistant tick populations and the consequent acaricide resistance observed in the field. Vaccination against ECF, selective breeding for tick resistance and integrated tick control approaches that limit tick exposure, could be adopted to interrupt spread of acaricide resistance. We recommend increasing monitoring and surveillance for TTBDs and for emerging acaricide resistance, improved extension services and sensitization of farmers on tick control measures, appropriate acaricide use and the development and implementation of vaccines for the control of TTBDs as more sustainable and effective interventions. A tick control policy should be developed, taking into account variations of agro-ecological zones, farm circumstances and indigenous technical knowledge, and this should be incorporated into the overall animal health program., This study was financially supported by the the National Agricultural Research Organization (NARO) of Uganda. MC was funded by the Ministerio de Ciencia, Innovación y Universidades, Spain (grant FJC-2018-038277-I).
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- 2021
41. Analysis of genetic diversity in Indian isolates of Rhipicephalus microplus based on Bm86 gene sequence
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Gaurav Nagar, José de la Fuente, Haranahally Vasanthachar Manjunathachar, Binod Kumar, Srikant Ghosh, Balasamudram Chandrasekhar Parthasarathi, Indian Council of Agricultural Research, National Agricultural Research Foundation, University Grants Commission (India), and Indian Veterinary Research Institute
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0301 basic medicine ,Tick infestation ,Garrapata ,Bm86 gene ,030231 tropical medicine ,Immunology ,Population ,lcsh:Medicine ,Rhipicephalus microplus ,Tick ,Tick control ,In silico analysis ,diversity ,03 medical and health sciences ,0302 clinical medicine ,Drug Discovery ,parasitic diseases ,in silico analysis ,medicine ,Pharmacology (medical) ,Tick Control ,education ,tick control ,Pharmacology ,Genetics ,Diversidad ,education.field_of_study ,Genetic diversity ,Diversity ,biology ,lcsh:R ,Reverse vaccinology ,medicine.disease ,biology.organism_classification ,Vaccine efficacy ,tick ,030104 developmental biology ,Infectious Diseases ,Gen Bm86 ,cattle ,Control de garrapatas ,Cattle - Abstract
This article belongs to the Section Veterinary Vaccines., The control of cattle tick, Rhipicephalus microplus, is focused on repeated use of acaricides. However, due to growing acaricide resistance and residues problem, immunization of animals along with limited use of effective acaricides is considered a suitable option for the control of tick infestations. To date, more than fifty vaccine candidates have been identified and tested worldwide, but two vaccines were developed using the extensively studied candidate, Bm86. The main reason for limited vaccine commercialization in other countries is genetic diversity in the Bm86 gene leading to considerable variation in vaccine efficacy. India, with 193.46 million cattle population distributed in 28 states and 9 union territories, is suffering from multiple tick infestation dominated by R. microplus. As R. microplus has developed multi-acaricide resistance, an efficacious vaccine may provide a sustainable intervention for tick control. Preliminary experiments revealed that the presently available commercial vaccine based on the BM86 gene is not efficacious against Indian strain. In concert with the principle of reverse vaccinology, genetic polymorphism of the Bm86 gene within Indian isolates of R. microplus was studied. A 578 bp conserved nucleotide sequences of Bm86 from 65 R. microplus isolates collected from 9 Indian states was sequenced and revealed 95.6–99.8% and 93.2–99.5% identity in nucleotides and amino acids sequences, respectively. The identities of nucleotides and deduced amino acids were 94.7–99.8% and 91.8–99.5%, respectively, between full-length sequence (orf) of the Bm86 gene of IVRI-I strain and published sequences of vaccine strains. Six nucleotides deletion were observed in Indian Bm86 sequences. Four B-cell epitopes (D519-K554, H563-Q587, C598-T606, T609-K623), which are present in the conserved region of the IVRI-I Bm86 sequence, were selected. The results confirm that the use of available commercial Bm86 vaccines is not a suitable option against Indian isolates of R. microplus. A country-specific multi-epitope Bm86 vaccine consisting of four specific B-cell epitopes along with candidate molecules, subolesin and tropomyosin in chimeric/co-immunization format may provide a sustainable option for implementation in an integrated tick management system., The authors are grateful to the Indian Council of Agricultural Research, New Delhi, for funding through the National Agricultural Science Fund (Grant numberNASF/ABA-6015/2016-17/357 and NFBSFARA/BSA-4004/2013-14 and also wish to thank The University Grant Commission (UGC) for providing Junior Research Fellowship (JRF). The APC is funded by the Indian Veterinary Research Institute.
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- 2021
42. Function of cofactor Akirin2 in the regulation of gene expression in model human Caucasian neutrophil-like HL60 cells
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José de la Fuente, Pilar Alberdi, Margarita Villar, Agustín Estrada-Peña, Adrián Velázquez-Campoy, Sara Artigas-Jerónimo, CSIC - Unidad de Recursos de Información Científica para la Investigación (URICI), Ministerio de Economía y Competitividad (España), and Universidad de Castilla La Mancha
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0301 basic medicine ,Proteomics ,Interactome ,Proteome ,Neutrophils ,Gene regulatory network ,interactome ,Biochemistry ,Interactoma ,Gene regulatory networks ,Histones ,0302 clinical medicine ,Histonas ,Gene Regulatory Networks ,Protein Interaction Maps ,RNA-Seq ,Subolesin ,Research Articles ,Regulation of gene expression ,Gene knockdown ,biology ,Molecular Interactions ,Chromatin ,Cell biology ,DNA-Binding Proteins ,Gene Expression Regulation, Neoplastic ,Histone ,030220 oncology & carcinogenesis ,Epigenetics ,Redes reguladoras de genes ,Signal Transduction ,Biophysics ,Omics ,Regulome ,HL-60 Cells ,03 medical and health sciences ,histones ,Humans ,Molecular Biology ,Transcription factor ,Gene Expression & Regulation ,epigenetics ,Gene Expression Profiling ,Cell Biology ,030104 developmental biology ,Subolesina ,Akirin ,biology.protein ,Akirina ,Epigenética ,Transcriptome ,Transcription Factors - Abstract
34 pags., 8 figs. (+SI), The Akirin family of transcription cofactors are involved throughout the metazoan in the regulation of different biological processes (BPs) such as immunity, interdigital regression, muscle and neural development. Akirin do not have catalytic or DNA-binding capability and exert its regulatory function primarily through interacting proteins such as transcription factors, chromatin remodelers, and RNA-associated proteins. In the present study, we focused on the human Akirin2 regulome and interactome in neutrophil-like model human Caucasian promyelocytic leukemia HL60 cells. Our hypothesis is that metazoan evolved to have Akirin2 functional complements and different Akirin2-mediated mechanisms for the regulation of gene expression. To address this hypothesis, experiments were conducted using transcriptomics, proteomics and systems biology approaches in akirin2 knockdown and wildtype (WT) HL60 cells to characterize Akirin2 gene/protein targets, functional complements and to provide evidence of different mechanisms that may be involved in Akirin2-mediated regulation of gene expression. The results revealed Akirin2 gene/protein targets in multiple BPs with higher representation of immunity and identified immune response genes as candidate Akirin2 functional complements. In addition to linking chromatin remodelers with transcriptional activation, Akirin2 also interacts with histone H3.1 for regulation of gene expression., This work was supported by the Ministerio de Economıa, Industria y Competitividad (Spain) [grant number BFU2016-79892-P]; the Predoctoral Fellowship of the UCLM (to Sara Artigas-Jeronimo); the University of Castilla La Mancha, Spain (to Margarita ´ Villar); and the Fondo Europeo de Desarrollo Regional, FEDER, EU (to Margarita Villar).
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- 2021
43. Analysis of Genetic Diversity in Indian Isolates of
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Balasamudram Chandrasekhar, Parthasarathi, Binod, Kumar, Gaurav, Nagar, Haranahally Vasanthachar, Manjunathachar, José, de la Fuente, and Srikant, Ghosh
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Rhipicephalus microplus ,cattle ,parasitic diseases ,in silico analysis ,Bm86 gene ,Article ,tick ,diversity ,tick control - Abstract
The control of cattle tick, Rhipicephalus microplus, is focused on repeated use of acaricides. However, due to growing acaricide resistance and residues problem, immunization of animals along with limited use of effective acaricides is considered a suitable option for the control of tick infestations. To date, more than fifty vaccine candidates have been identified and tested worldwide, but two vaccines were developed using the extensively studied candidate, Bm86. The main reason for limited vaccine commercialization in other countries is genetic diversity in the Bm86 gene leading to considerable variation in vaccine efficacy. India, with 193.46 million cattle population distributed in 28 states and 9 union territories, is suffering from multiple tick infestation dominated by R. microplus. As R. microplus has developed multi-acaricide resistance, an efficacious vaccine may provide a sustainable intervention for tick control. Preliminary experiments revealed that the presently available commercial vaccine based on the BM86 gene is not efficacious against Indian strain. In concert with the principle of reverse vaccinology, genetic polymorphism of the Bm86 gene within Indian isolates of R. microplus was studied. A 578 bp conserved nucleotide sequences of Bm86 from 65 R. microplus isolates collected from 9 Indian states was sequenced and revealed 95.6–99.8% and 93.2–99.5% identity in nucleotides and amino acids sequences, respectively. The identities of nucleotides and deduced amino acids were 94.7–99.8% and 91.8–99.5%, respectively, between full-length sequence (orf) of the Bm86 gene of IVRI-I strain and published sequences of vaccine strains. Six nucleotides deletion were observed in Indian Bm86 sequences. Four B-cell epitopes (D519-K554, H563-Q587, C598-T606, T609-K623), which are present in the conserved region of the IVRI-I Bm86 sequence, were selected. The results confirm that the use of available commercial Bm86 vaccines is not a suitable option against Indian isolates of R. microplus. A country-specific multi-epitope Bm86 vaccine consisting of four specific B-cell epitopes along with candidate molecules, subolesin and tropomyosin in chimeric/co-immunization format may provide a sustainable option for implementation in an integrated tick management system.
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- 2020
44. Detection of environmental SARS-CoV-2 RNA in a high prevalence setting in Spain
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Isabel G. Fernández-de-Mera, Inmaculada Moreno, José de la Fuente, Lucas Domínguez, Dolores Hervás, Francisco J. Rodríguez del‐Río, Mercedes Domínguez, Christian Gortázar, Marta Pérez-Sancho, Universidad de Castilla La Mancha, Fernández de Mera, Isabel G. [0000-0001-5936-4018], Gortázar, Christian [0000-0003-0012-4006], University of Castilla-La Mancha (España), Universidad de Castilla‐La Mancha, Fernández de Mera, Isabel G., and Gortázar, Christian
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medicine.medical_specialty ,Population ,Sewage ,Disease ,medicine.disease_cause ,Risk hotspot identification ,SARS‐CoV‐2 ,Environmental health ,Pandemic ,Epidemiology ,medicine ,Environmental Microbiology ,Prevalence ,Animals ,Humans ,Environmental pathogen monitoring ,Viral shedding ,education ,Coronavirus ,Disease surveillance ,education.field_of_study ,General Veterinary ,General Immunology and Microbiology ,business.industry ,SARS-CoV-2 ,COVID-19 ,General Medicine ,Rural Spain ,Virus Shedding ,Geography ,Spain ,Communicable Disease Control ,RNA, Viral ,business ,Environmental Monitoring - Abstract
Since March 2020, Spain (along with many other countries) has been severely affected by the ongoing coronavirus disease 19 (COVID‐19) pandemic caused by the rapid spread of a new virus (severe acute respiratory syndrome coronavirus 2; SARS‐CoV‐2). As part of global efforts to improve disease surveillance, we investigated how readily SARS‐CoV‐2 RNA could be detected in environmental samples collected from an isolated rural community in Spain with a high COVID‐19 prevalence (6% of the population of 883 inhabitants). The first diagnosis of COVID‐19‐compatible symptoms in the village was recorded on March 3, 2020 and the last known active case resolved on June 5, 2020. By May 15, two months after strict movement constraints were imposed (“lockdown”) the cumulative number of symptomatic cases had increased to 53. Of those cases, 22 (41%) had been tested and confirmed by RT‐PCR. On May 13 and June 5, samples were collected from high‐use surfaces and clothes in the homes of 13 confirmed cases, from surfaces in nine public service sites (e.g. supermarket and petrol station), and from the wastewater of the village sewage system. SARS‐CoV‐2 RNA was detected in 7 of 57 (12%) samples, including three households and three public sites. While there is not yet sufficient evidence to recommend environmental surveillance as a standard approach for COVID‐19 epidemiology, environmental surveillance research may contribute to advance knowledge about COVID‐19 by further elucidating virus shedding dynamics and environmental contamination, including the potential identification of animal reservoirs., This study had no specific funding although we benefitted from Universidad de Castilla-La Mancha support through the COVID Diagnosis Action. We would like to thank the local veterinarian Javier Camarena, the local healthcare staff, and the municipality of Horcajo de los Montes for help in wastewater sampling and logistics, and for providing detailed information on disinfection and patient support activities. Mariana Boadella (Sabiotec, Ciudad Real, Spain) kindly provided the sponges. IGFM is supported by the Research Plan of the University of Castilla- La Mancha (UCLM), Spain
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- 2020
45. Coronavirus in cat flea: findings and questions regarding COVID-19
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Isabel G. Fernández de Mera, Margarita Villar, Marinela Contreras, Christian Gortázar, José de la Fuente, Sara Artigas-Jerónimo, Universidad de Castilla La Mancha, European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Fuente, José de la [0000-0001-7383-9649], and Fuente, José de la
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Proteomics ,0301 basic medicine ,Flea ,Arthropod ,viruses ,Cat flea ,Pneumonia, Viral ,030231 tropical medicine ,Peptidyl-Dipeptidase A ,medicine.disease_cause ,lcsh:Infectious and parasitic diseases ,Betacoronavirus ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Animals ,Humans ,lcsh:RC109-216 ,Amino Acid Sequence ,Pandemics ,Letter to the Editor ,ACE ,Ctenocephalides ,Coronavirus ,biology ,SARS-CoV-2 ,Transmission (medicine) ,Felis ,COVID-19 ,Cat ,virus diseases ,biology.organism_classification ,Ixodes uriae ,Virology ,Insect Vectors ,030104 developmental biology ,Infectious Diseases ,Parasitology ,Coronavirus Infections - Abstract
The coronavirus disease 19 (COVID-19) pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARSCoV-2) has afected millions of people worldwide. Recent evidence raised the question about the possibility that cats may be a domestic host for SARS-CoV-2 with unknown implications in disease dissemination. Based on the fact that the domestic cat fea, Ctenocephalides felis, are abundant ectoparasites infesting humans, companion animals and wildlife and that coronavirus-like agents have been identifed in the ectoparasite tick vector, Ixodes uriae of seabirds, herein we considered the presence of coronaviruses in general and SARS-CoV-2 in particular in C. felis. We identi‑ fed coronavirus-derived and cell receptor angiotensin-converting enzyme RNA/proteins in C. felis. Although cur‑ rent evidence suggests that pets are probably dead-end-hosts with small risk of transmission to humans, our results suggested that cat fea may act as biological and/or mechanical vectors of SARS-CoV. Although preliminary, these results indicate a possibility of ectoparasites acting as reservoirs and vectors of SARS-CoV and related beta-coronavirus although with little disease risk due to systemic transmission route, low viremia, virus attenuation or other unknown factors. These results support the need to further study the role of animal SARS-CoV-2 hosts and their ectoparasite vectors in COVID-19 disease spread., MV was supported by the UCLM and the Fondo Europeo de Desarrollo Regional, FEDER, EU. IGFM was supported by the UCLM. SA-J was supported by a predoctoral fellowship of the UCLM. MC was funded by the Ministerio de Ciencia, Innovación y Universidades, Spain (Grant FJC-2018-038277-I).
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- 2020
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46. Challenges for the Control of Poultry Red Mite (Dermanyssus gallinae)
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José Francisco Lima-Barbero, José de la Fuente, Ursula Höfle, and Margarita Villar
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Veterinary medicine ,Dermanyssus gallinae ,Mite ,Biology ,biology.organism_classification - Published
- 2020
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47. α-Gal-Based Vaccines: Advances, Opportunities, and Perspectives
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Alejandro Cabezas-Cruz, Lourdes Mateos-Hernández, José de la Fuente, Adnan Hodžić, University of Veterinary Medicine [Vienna] (Vetmeduni), Biologie moléculaire et immunologie parasitaires et fongiques (BIPAR), École nationale vétérinaire d'Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Dozulé, Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Instituto de Investigación en Recursos Cinegéticos (IREC), and École nationale vétérinaire - Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Dozulé
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0301 basic medicine ,Glycan ,Protective immunity ,030231 tropical medicine ,Computational biology ,parasites ,Adaptive Immunity ,immunization ,Antibodies ,03 medical and health sciences ,0302 clinical medicine ,Antigen ,Immunity ,vaccine ,Parasitic Diseases ,Animals ,Humans ,Vaccines ,Innate immune system ,biology ,α-Gal ,protection ,immunity ,3. Good health ,Review article ,030104 developmental biology ,Infectious Diseases ,Immunization ,biology.protein ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,Parasitology ,Antibody ,[SDV.IMM.VAC]Life Sciences [q-bio]/Immunology/Vaccinology - Abstract
Humans and crown catarrhines evolved with the inability to synthesize the oligosaccharide galactose-α-1,3-galactose (α-Gal). In turn, they naturally produce high quantities of the glycan-specific antibodies that can be protective against infectious agents exhibiting the same carbohydrate modification on their surface coat. The protective immunity induced by α-Gal is ensured through an antibody-mediated adaptive and cell-mediated innate immune response. Therefore, the α-Gal antigen represents an attractive and feasible target for developing glycan-based vaccines against multiple diseases. In this review article we provide an insight into our current understanding of the mechanisms involved in the protective immunity to α-Gal and discuss the possibilities and challenges in developing a single-antigen pan-vaccine for prevention and control of parasitic diseases of medical and veterinary concern.
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- 2020
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48. Vaccination with Recombinant Subolesin Antigens Provides Cross-Tick Species Protection in
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Paul D, Kasaija, Marinela, Contreras, Fredrick, Kabi, Swidiq, Mugerwa, and José, de la Fuente
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uganda ,akirin ,cattle ,vaccine ,parasitic diseases ,Article ,tick ,subolesin - Abstract
Cattle tick infestations and transmitted pathogens affect animal health, production and welfare with an impact on cattle industry in tropical and subtropical countries. Anti-tick vaccines constitute an effective and sustainable alternative to the traditional methods for the control of tick infestations. Subolesin (SUB)-based vaccines have shown efficacy for the control of multiple tick species, but several factors affect the development of new and more effective vaccines for the control of tick infestations. To address this challenge, herein we used a regional and host/tick species driven approach for vaccine design and implementation. The objective of the study was to develop SUB-based vaccines for the control of the most important tick species (Rhipicephalus appendiculatus, R. decoloratus and Amblyomma variegatum) affecting production of common cattle breeds (Bos indicus and B. indicus x B. taurus crossbred) in Uganda. In this way, we addressed the development of anti-tick vaccines as an intervention to prevent the economic losses caused by ticks and tick-borne diseases in the cattle industry in Uganda. The results showed the possibility of using SUB antigens for the control of multiple tick species in B. indicus and crossbred cattle and suggested the use of R. appendiculatus SUB to continue research on vaccine design and formulation for the control of cattle ticks in Uganda. Future directions would include quantum vaccinology approaches based on the characterization of the SUB protective epitopes, modeling of the vaccine E under Ugandan ecological and epidemiological conditions and optimization of vaccine formulation including the possibility of oral administration.
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- 2020
49. Modeling tick vaccines: a key tool to improve protection efficacy
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Marinela Contreras, José de la Fuente, Agustín Estrada-Peña, Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo, and John Sealy Memorial Endowment Fund
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0301 basic medicine ,Crimean–Congo hemorrhagic fever ,Vaccine evaluation ,Immunology ,Tick ,03 medical and health sciences ,0302 clinical medicine ,parasitic diseases ,Drug Discovery ,medicine ,Animals ,Humans ,030212 general & internal medicine ,Antigens ,Immunization Schedule ,Pharmacology ,Vaccines ,Animal health ,biology ,business.industry ,Transmission (medicine) ,Vaccination ,Tick-borne pathogen ,Models, Theoretical ,bacterial infections and mycoses ,medicine.disease ,Hemorrhagic fever virus ,biology.organism_classification ,Biotechnology ,Tick Infestations ,030104 developmental biology ,Tick-Borne Diseases ,Hemorrhagic Fever Virus, Crimean-Congo ,Molecular Medicine ,Hemorrhagic Fever, Crimean ,business ,Vaccine ,Model ,Omics technologies - Abstract
[Introduction]: The development of more effective vaccines for the control of tick infestations and pathogen transmission is essential for prevention and control of tick-borne diseases worldwide. Recently, the application of omics technologies has advanced the identification of tick protective antigens. However, other factors such as vaccine formulation and implementation need to be addressed, and tick vaccine modeling will contribute to improve the efficacy of vaccination strategies., [Areas covered]: In this review, we summarized current information on tick vaccine correlates of protection and modeling, and proposed new approaches to improve vaccine evaluation and implementation using as a proof-of-concept the Hyalomma marginatum-Crimean-Congo hemorrhagic fever virus model due to its high mortality rate and potentially growing impact on human health., [Expert opinion]: Vaccines are required as an effective and environmentally sound intervention for the control of tick-borne diseases affecting human and animal health worldwide. Despite recent advances in the identification of candidate tick protective antigens, research on vaccine formulation and implementation need to be addressed to improve tick vaccine control efficacy. As shown here, modeling of the vaccination strategies against ticks and transmitted pathogens will contribute to vaccine development by guiding the selection of appropriate antigen combinations, target hosts, and vaccination time schedule., This work has been partially supported by the Spanish program CYTED, project number 118RT0542 and The Sealy and Smith Foundation, Galveston, TX, USA, grant number 84477.
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- 2020
50. Interactomics and tick vaccine development: new directions for the control of tick-borne diseases
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José de la Fuente, Sara Artigas-Jerónimo, Margarita Villar, Universidad de Castilla La Mancha, Ministerio de Economía y Competitividad (España), and European Commission
- Subjects
Proteomics ,0301 basic medicine ,Zoology ,Biology ,Tick ,Biochemistry ,03 medical and health sciences ,Ticks ,parasitic diseases ,Tick-borne diseases ,medicine ,Animals ,Humans ,Interactomics ,Molecular Biology ,Vaccines ,Tick-borne disease ,Obligate ,bacterial infections and mycoses ,biology.organism_classification ,medicine.disease ,3. Good health ,030104 developmental biology ,Host-Pathogen Interactions ,Arthropod ,Vaccine - Abstract
[Introduction]: Ticks are obligate hematophagous arthropod ectoparasites that transmit pathogens responsible for a growing number of tick-borne diseases (TBDs) throughout the world. Vaccines have been shown to be the most efficient, cost-effective, and environmentally friendly approach for the control of ticks and the prevention of TBDs. Although at its infancy, interactomics has shown the possibilities that the knowledge of the interactome offers in understanding tick biology and the molecular mechanisms involved in pathogen infection and transmission. Furthermore, interactomics has provided information for the identification of candidate vaccine protective antigens. [Areas covered]: In this special report, we review the different approaches used for the study of protein–protein physical and functional interactions, and summarize the application of interactomics to the characterization of tick biology and tick–host–pathogen interactions, and the possibilities that offers to vaccine development for the control of ticks and TBDs. [Expert commentary]: The combination of interacting proteins in antigen formulations may increase vaccine efficacy. In the near future, the combination of interactomics with other omics approaches such as transcriptomics, proteomics, metabolomics, and regulomics together with intelligent Big Data analytic techniques will improve the high throughput discovery and characterization of vaccine protective antigens for the prevention and control of TBDs., The preparation of this paper was partially supported by the Ministerio de Economía y Competitividad, Spain (project BFU2016–79892–P). MV was supported by the Research Plan of the University of Castilla – La Mancha, Spain. SAJ was supported by the H2020 COllaborative Management Platform for detection and Analyses of (Re-) emerging and foodborne outbreaks in Europe (COMPARE) [grant number 643476].
- Published
- 2018
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