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Food insecurity elimination is a major focus of the Sustainable Development Goals and addresses one of the most pressing needs in developing countries. With the increasing incidence of food insecurity, poverty, and inequalities, there is a need for realignment of agriculture that aims to empower especially the rural poor smallholders by increasing productivity to improving food security conditions. Repositioning the agricultural sector should avoid general statements about production improvement, instead, it should tailor to location-specific recommendations that fully acknowledge the local spatial diversity of the natural resource base that largely determines production potentials under current low input agriculture. This paper aims to deconstruct the complex and multidimensional aspect of food insecurity and provides policymakers with an approach for mapping the spatial dimension of food insecurity. Using a set of GIS-based indicators, and a small-area approach, we combine Principal Component Analysis and GIS spatial analysis to construct one composite index and four individual indices based on the four dimensions of food security (access, availability, stability, and utilization) to map the spatial dimension of food insecurity in Vihiga County, Kenya. Data were collected by the use of a geocoded household survey questionnaire. The results reveal the existence of a clear and profound spatial disparity of food insecurity. Mapping food insecurity using individual dimension indices provides a more detailed picture of food insecurity as compared to the single composite index. Spatially disaggregated data, a small area approach, and GIS-based indicators prove valuable for mapping local-level causative factors of household food insecurity. Effective policy approaches to combat food insecurity inequalities should integrate spatially targeted interventions for each dimension of food insecurity.