1. High-resolution QTL mapping in Tetranychus urticae reveals acaricide-specific responses and common target-site resistance after selection by different METI-I acaricides
- Author
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René Feyereisen, Wannes Dermauw, Andre H. Kurlovs, Robert Greenhalgh, Thomas Van Leeuwen, Simon Snoeck, Ernesto Villacis-Perez, Sabina Bajda, Olivia Kosterlitz, and Richard M. Clark
- Subjects
NADH-UBIQUINONE OXIDOREDUCTASE ,0106 biological sciences ,Nonsynonymous substitution ,STRAIN ,Quantitative Trait Loci ,Drug Resistance ,Quantitative trait locus ,01 natural sciences ,Biochemistry ,COMPLEX-I ,MECHANISMS ,03 medical and health sciences ,chemistry.chemical_compound ,KOCH ACARI ,Spider mite ,Animals ,Gene family ,ELECTRON-TRANSFER ,P450 REDUCTASE ,Tetranychus urticae ,Selection, Genetic ,Molecular Biology ,Acaricides ,030304 developmental biology ,Tebufenpyrad ,Genetics ,0303 health sciences ,biology ,Acaricide ,Bulked segregant analysis ,Biology and Life Sciences ,CYTOCHROME-P450 ,Chromosome Mapping ,biology.organism_classification ,010602 entomology ,chemistry ,Insect Science ,Female ,SULFUR CLUSTER N2 ,INHIBITORS ,Tetranychidae - Abstract
Arthropod herbivores cause dramatic crop losses, and frequent pesticide use has led to widespread resistance in numerous species. One such species, the two-spotted spider mite, Tetranychus urticae, is an extreme generalist herbivore and a major worldwide crop pest with a history of rapidly developing resistance to acaricides. Mitochondrial Electron Transport Inhibitors of complex I (METI-Is) have been used extensively in the last 25 years to control T. urticae around the globe, and widespread resistance to each has been documented. METI-I resistance mechanisms in T. urticae are likely complex, as increased metabolism by cytochrome P450 monooxygenases as well as a target-site mutation have been linked with resistance. To identify loci underlying resistance to the METI-I acaricides fenpyroximate, pyridaben and tebufenpyrad without prior hypotheses, we crossed a highly METI-I-resistant strain of T. urticae to a susceptible one, propagated many replicated populations over multiple generations with and without selection by each compound, and performed bulked segregant analysis genetic mapping. Our results showed that while the known H92R target-site mutation was associated with resistance to each compound, a genomic region that included cytochrome P450-reductase (CPR) was associated with resistance to pyridaben and tebufenpyrad. Within CPR, a single nonsynonymous variant distinguished the resistant strain from the sensitive one. Furthermore, a genomic region linked with tebufenpyrad resistance harbored a non-canonical member of the nuclear hormone receptor 96 (NHR96) gene family. This NHR96 gene does not encode a DNA-binding domain (DBD), an uncommon feature in arthropods, and belongs to an expanded family of 47 NHR96 proteins lacking DBDs in T. urticae. Our findings suggest that although cross-resistance to METI-Is involves known detoxification pathways, structural differences in METI-I acaricides have also resulted in resistance mechanisms that are compound-specific.
- Published
- 2019