1. MDM2 promoter SNP344TA (rs1196333) status does not affect cancer risk
- Author
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Knappskog, S., Gansmo, L.B., Romundstad, P., Bjornslett, M., Trovik, J., Sommerfelt-Pettersen, J., Lokkevik, E., Tollenaar, R.A.E.M., Seynaeve, C., Devilee, P., Salvesen, H.B., Dorum, A., Hveem, K., Vatten, L., Lonning, P.E., Norwegian Breast Canc Grp, and Medical Oncology
- Subjects
Male ,Epidemiology ,lcsh:Medicine ,medicine.disease_cause ,Bioinformatics ,Proto-Oncogene Mas ,Prostate cancer ,Molecular cell biology ,Neoplasms ,Genotype ,Basic Cancer Research ,lcsh:Science ,Promoter Regions, Genetic ,Multidisciplinary ,Cancer Risk Factors ,Proto-Oncogene Proteins c-mdm2 ,Gene Expression Regulation, Neoplastic ,Oncology ,Genetic Epidemiology ,Medicine ,Female ,Cancer Epidemiology ,Research Article ,Molecular Sequence Data ,DNA transcription ,Genetic Causes of Cancer ,Single-nucleotide polymorphism ,Biology ,Polymorphism, Single Nucleotide ,Breast cancer ,SDG 3 - Good Health and Well-being ,Uterine cancer ,medicine ,Humans ,Genetic Predisposition to Disease ,Allele ,Base Sequence ,lcsh:R ,Computational Biology ,Promoter ,medicine.disease ,Haplotypes ,Cancer research ,Genetic Polymorphism ,lcsh:Q ,Gene expression ,Carcinogenesis ,Population Genetics ,Transcription Factors - Abstract
The MDM2 proto-oncogene plays a key role in central cellular processes like growth control and apoptosis, and the gene locus is frequently amplified in sarcomas. Two polymorphisms located in the MDM2 promoter P2 have been shown to affect cancer risk. One of these polymorphisms (SNP309T>G; rs2279744) facilitates Sp1 transcription factor binding to the promoter and is associated with increased cancer risk. In contrast, SNP285G>C (rs117039649), located 24 bp upstream of rs2279744, and in complete linkage disequilibrium with the SNP309G allele, reduces Sp1 recruitment and lowers cancer risk. Thus, fine tuning of MDM2 expression has proven to be of significant importance with respect to tumorigenesis. We assessed the potential functional effects of a third MDM2 promoter P2 polymorphism (SNP344T>A; rs1196333) located on the SNP309T allele. While in silico analyses indicated SNP344A to modulate TFAP2A, SPIB and AP1 transcription factor binding, we found no effect of SNP344 status on MDM2 expression levels. Assessing the frequency of SNP344A in healthy Caucasians (n = 2,954) and patients suffering from ovarian (n = 1,927), breast (n = 1,271), endometrial (n = 895) or prostatic cancer (n = 641), we detected no significant difference in the distribution of this polymorphism between any of these cancer forms and healthy controls (6.1% in healthy controls, and 4.9%, 5.0%, 5.4% and 7.2% in the cancer groups, respectively). In conclusion, our findings provide no evidence indicating that SNP344A may affect MDM2 transcription or cancer risk. © 2012 Knappskog et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
- Published
- 2012