1. Additional file 1 of A CRISPR-based chromosomal-separation technique for Escherichia coli
- Author
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Su, Junchang, Wang, Pengju, Li, Ju, Zhao, Dongdong, Li, Siwei, Fan, Feiyu, Dai, Zhubo, Liao, Xiaoping, Mao, Zhitao, Zhang, Chunzhi, Bi, Changhao, and Zhang, Xueli
- Abstract
Additional file 1: Table S1. Plasmids and E. coli stains used in this study. Table S2. Primers used in this study. Table S3. The schematic and sequences of the editing cassette used in this study. Table S4. The sequences of clone PCR products used to identity the E. coli variants. Figure S1. Stability of the chromosomal organization of E. coli0.10/4.54 and E. coli2.28/2.36. (A) Colony PCR analysis of the E. coli0.10/4.54 cells after culturing for more than 100 generations using the primer pairs f1/r1, f2/r2, f1/r2 and f2/r1. (B) Colony PCR analysis of E. coli2.28/2.36 after culturing for more than 100 generations using the primer pairs f3/r3, f4/r4, f3/r4 and f4/r3. Figure S2. Stability of the chromosomal organization of E. coli2.28/2.36 (mix with E. coliMut). A total of 11 rounds of inoculation were conducted, corresponding to approximately 100 generations. The culture of the first (0 generation), third (about 30 generations), fifth (about 50 generations), seventh (about 70 generations), ninth (about 90 generations) and last (about 100 generations) round of E. coli2.28/2.36 (mix with E. coliMut) was spread on LB agar plates, 24 single colonies of each strain were selected and four pairs of primers f5/r5, f6/r6, f5/f6 and r5/r6 were used to investigate the speed of transition of genomic instability with the passage of generations.
- Published
- 2022
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