[Objectives] The main purpose of this study is to screen the Bacillus spp. with high antimicrobial activity from the rhizosphere soil of Malaysia. The lipopeptides produced by the Bacillus strains were identified, and biocontrol activities of these strains were evaluated.[Methods] The analysis of antagonistic activity was used to screen the Bacillus spp. with strong antagonistic activities against Xanthomonas oryzae pv.oryzae or Sclerotinia sclerotiorum. The phylogenetic tree based on the sequences of 16S rDNA and gyrB gene was used to identify the isolated Bacillus spp. strains. The matrix-assisted laser desorption/ionization-time of fligh mass spectrometry(MALDI-TOF-MS)was used to analyze the lipopeptide compound produced by the isolated strains. The greenhouse expriments were performed to evaluate the biocontrol effect on rice bacterial leaf blight of Bacillus spp. strains.[Results] The results of antagonistic activities showed that six isolated Bacillus strains(D15, W3, Klu7, YM16, D1 and PLZ26)have significant inhibitory activities against Xanthomonas oryzae pv.oryzae or Sclerotinia sclerotiorum, and among these strains, D15 and W3 have inhibitory activities to both of them. Phylogenetic tree indicated that these six isolates were identified to be most closely related to Bacillus amyloliquefaciens(D15 and W3), B. pumilus(Klu7), B. cereus(YM16)and B. thuringiensis(D1 and PLZ26). Lipopeptide compound analysis via MALDI-TOF-MS showed that PLZ26 and Klu7 produced Surfactin, and strains D15 and W3 produced Iturin A. The evaluation of the biocontrol effect showed that PLZ26 has good control effect on bacterial blight of rice.[Conclusions] This study provided the bacterial resources for the research and exploitation of biopesticides. [ABSTRACT FROM AUTHOR]